1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Mulloy, B.
Forster, M.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C6 H10 O10 S
274.203
n
2-O-sulfo-alpha-L-idopyranuronic acid
O2-SULFO-GLUCURONIC ACID; 2-O-sulfo-alpha-L-iduronic acid; 2-O-sulfo-L-iduronic acid; 2-O-sulfo-iduronic acid
L-saccharide, alpha linking
C6 H13 N O11 S2
339.298
n
2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose
N,O6-DISULFO-GLUCOSAMINE; 6-O-sulfo-N-sulfo-alpha-D-glucosamine; 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucose; 2-deoxy-6-O-sulfo-2-(sulfoamino)-D-glucose; 2-deoxy-6-O-sulfo-2-(sulfoamino)-glucose
D-saccharide, alpha linking
N
1
R
C
N
2
R
C
N
3
S
C
N
4
S
C
N
5
R
C
N
6
N
C
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
O
N
11
N
O
N
12
N
O
N
13
N
O
N
14
N
S
N
15
N
O
N
16
N
O
N
17
N
O
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
S
C
N
29
R
C
N
30
R
C
N
31
S
C
N
32
R
C
N
33
N
C
N
34
N
N
N
35
N
O
N
36
N
O
N
37
N
O
N
38
N
O
N
39
N
O
N
40
N
S
N
41
N
O
N
42
N
O
N
43
N
O
N
44
N
S
N
45
N
O
N
46
N
O
N
47
N
O
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
doub
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
doub
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
doub
N
54
N
doub
N
55
N
sing
N
56
N
sing
N
57
N
doub
N
58
N
doub
N
59
N
sing
N
60
N
sing
UK
Biochem.J.
BIJOAK
0043
0264-6021
293
849
858
8352752
N.m.r. and molecular-modelling studies of the solution conformation of heparin.
1993
NE
Carbohydr.Res.
CRBRAT
0156
0008-6215
255
1
The Effect of Variation of Substitution on the Solution Conformation of Heparin: A Spectroscopic and Molecular Modelling Study
1994
UK
J.Mol.Graphics
JMGRDV
0949
0263-7855
7
196
Noemol: Integrated Molecular Graphics and the Simulation of Nuclear Overhauser Effects in NMR Spectroscopy
1989
10.2210/pdb1hpn/pdb
pdb_00001hpn
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
3482.839
2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose
1
man
branched
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_database_status
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
struct_asym
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Atomic model
Data collection
Derived calculations
Other
Structure summary
Data collection
Database references
Structure summary
1
0
1995-03-31
1
1
2008-03-24
1
2
2011-07-13
2
0
2020-07-29
2
1
2024-05-01
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_pdbx_database_status.process_site
_pdbx_struct_assembly_gen.asym_id_list
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_value_order
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
SGN
1
n
A
SGN
1
IDS
2
n
A
IDS
2
SGN
3
n
A
SGN
3
IDS
4
n
A
IDS
4
SGN
5
n
A
SGN
5
IDS
6
n
A
IDS
6
SGN
7
n
A
SGN
7
IDS
8
n
A
IDS
8
SGN
9
n
A
SGN
9
IDS
10
n
A
IDS
10
SGN
11
n
A
SGN
11
IDS
12
n
A
IDS
12
a-L-IdopA2SO3
DGlcpNS[6S]a
N-sulfo-6-sulfo-a-D-glucopyranose
a-D-GlcpNSO36SO3
Y
BNL
1995-01-17
REL
oligosaccharide
WURCS=2.0/2,12,11/[a2122h-1a_1-5_2*NSO/3=O/3=O_6*OSO/3=O/3=O][a2121A-1a_1-5_2*OSO/3=O/3=O]/1-2-1-2-1-2-1-2-1-2-1-2/a4-b1_b4-c1_c4-d1_d4-e1_e4-f1_f4-g1_g4-h1_h4-i1_i4-j1_j4-k1_k4-l1
1
PDB2Glycan
1.1.0
WURCS
[][a-D-GlcpNSO36SO3]{[(4+1)][a-L-IdopA2SO3]{[(4+1)][a-D-GlcpNSO36SO3]{[(4+1)][a-L-IdopA2SO3]{[(4+1)][a-D-GlcpNSO36SO3]{[(4+1)][a-L-IdopA2SO3]{[(4+1)][a-D-GlcpNSO36SO3]{[(4+1)][a-L-IdopA2SO3]{[(4+1)][a-D-GlcpNSO36SO3]{[(4+1)][a-L-IdopA2SO3]{[(4+1)][a-D-GlcpNSO36SO3]{[(4+1)][a-L-IdopA2SO3]{}}}}}}}}}}}}
1
PDB-CARE
LINUCS
C1
O4
IDS
SGN
2
1
1
O1
HO4
sing
C1
O4
SGN
IDS
3
2
1
O1
HO4
sing
C1
O4
IDS
SGN
4
3
1
O1
HO4
sing
C1
O4
SGN
IDS
5
4
1
O1
HO4
sing
C1
O4
IDS
SGN
6
5
1
O1
HO4
sing
C1
O4
SGN
IDS
7
6
1
O1
HO4
sing
C1
O4
IDS
SGN
8
7
1
O1
HO4
sing
C1
O4
SGN
IDS
9
8
1
O1
HO4
sing
C1
O4
IDS
SGN
10
9
1
O1
HO4
sing
C1
O4
SGN
IDS
11
10
1
O1
HO4
sing
C1
O4
IDS
SGN
12
11
1
O1
HO4
sing
n
n
n
n
n
n
n
n
n
n
n
n
2
FORSTER
refinement
NOEMOL
ALLINGER,YUH
refinement
MM2
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
2
A
A
O2S
O3S
IDS
SGN
10
11
1.71
2
A
A
O2S
O3S
IDS
SGN
8
9
1.71
2
A
A
O1S
O3S
IDS
SGN
4
5
1.72
2
A
A
O1S
O3S
IDS
SGN
2
3
1.72
2
A
A
O2S
O3S
IDS
SGN
6
7
1.79
N.M.R. AND MOLECULAR-MODELLING STUDIES OF THE SOLUTION CONFORMATION OF HEPARIN
1
Y
N
covale
1.398
both
sing
A
SGN
1
A
O4
SGN
1_555
A
IDS
2
A
C1
IDS
1_555
covale
1.398
both
sing
A
IDS
2
A
O4
IDS
1_555
A
SGN
3
A
C1
SGN
1_555
covale
1.397
both
sing
A
SGN
3
A
O4
SGN
1_555
A
IDS
4
A
C1
IDS
1_555
covale
1.397
both
sing
A
IDS
4
A
O4
IDS
1_555
A
SGN
5
A
C1
SGN
1_555
covale
1.398
both
sing
A
SGN
5
A
O4
SGN
1_555
A
IDS
6
A
C1
IDS
1_555
covale
1.399
both
sing
A
IDS
6
A
O4
IDS
1_555
A
SGN
7
A
C1
SGN
1_555
covale
1.398
both
sing
A
SGN
7
A
O4
SGN
1_555
A
IDS
8
A
C1
IDS
1_555
covale
1.398
both
sing
A
IDS
8
A
O4
IDS
1_555
A
SGN
9
A
C1
SGN
1_555
covale
1.398
both
sing
A
SGN
9
A
O4
SGN
1_555
A
IDS
10
A
C1
IDS
1_555
covale
1.398
both
sing
A
IDS
10
A
O4
IDS
1_555
A
SGN
11
A
C1
SGN
1_555
covale
1.397
both
sing
A
SGN
11
A
O4
SGN
1_555
A
IDS
12
A
C1
IDS
1_555
GLYCOSAMINOGLYCAN
GLYCOSAMINOGLYCAN
1
P 1