0.016517 0.000000 0.000000 0.000000 0.011310 0.000000 0.000000 0.000000 0.021513 0.00000 0.00000 0.00000 Watenpaugh, K.D. Janakiraman, M.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 60.543 88.416 46.484 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C28 H28 N2 O5 S 504.597 4-CYANO-N-(3-CYCLOPROPYL(5,6,7,8,9,10-HEXAHYDRO-4-HYDROXY-2-OXO-CYCLOOCTA[B]PYRAN-3-YL)METHYL)PHENYL BENZENSULFONAMIDE non-polymer C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H Y 372 N C Y 373 N C N 374 N O Y 375 N O Y 376 N C Y 377 N C Y 378 N C N 379 N O Y 380 N C Y 381 N C Y 382 N C Y 383 N C Y 384 N C Y 385 N C N 386 R C N 387 N C N 388 N C N 389 N C N 390 N C N 391 N C N 392 N C N 393 N C N 394 N C N 395 N C N 396 N N N 397 N S N 398 N O N 399 N O Y 400 N C Y 401 N C Y 402 N C Y 403 N C Y 404 N C Y 405 N C N 406 N C N 407 N N N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N N N 437 S C N 438 N C N 439 N O N 440 N C N 441 N C N 442 N C N 443 N O N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing Y 358 N sing Y 359 N doub N 360 N sing N 361 N doub Y 362 N sing Y 363 N sing Y 364 N doub N 365 N sing Y 366 N sing N 367 N sing N 368 N sing N 369 N sing Y 370 N doub Y 371 N sing N 372 N sing Y 373 N sing N 374 N sing Y 375 N doub N 376 N sing Y 377 N sing N 378 N sing Y 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N doub N 412 N doub N 413 N sing Y 414 N doub Y 415 N sing Y 416 N sing N 417 N sing Y 418 N doub N 419 N sing Y 420 N sing N 421 N sing Y 422 N doub N 423 N sing N 424 N sing N 425 N trip N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 40 1149 1164 10.1021/jm960441m 9089336 Structure-based design of nonpeptidic HIV protease inhibitors: the sulfonamide-substituted cyclooctylpyramones. 1997 US J.Med.Chem. JMCMAR 0151 0022-2623 38 4968 4971 8544171 Structure-based design of sulfonamide-substituted non-peptidic HIV protease inhibitors. 1995 10.2210/pdb1hpo/pdb pdb_00001hpo 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298 1 AREA DETECTOR 1994-02-28 SIEMENS GRAPHITE(002) M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE SIEMENS 10804.808 HIV-1 PROTEASE 3.4.23.16 Q7K, L33I, L63I 2 man polymer 504.597 4-CYANO-N-(3-CYCLOPROPYL(5,6,7,8,9,10-HEXAHYDRO-4-HYDROXY-2-OXO-CYCLOOCTA[B]PYRAN-3-YL)METHYL)PHENYL BENZENSULFONAMIDE 1 syn non-polymer 18.015 water 164 nat water HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 PROTEASE no no PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Lentivirus Escherichia sample 11676 Human immunodeficiency virus 1 562 Escherichia coli 1 2.88 57.25 VAPOR DIFFUSION, HANGING DROP 5.4 CRYSTALS WERE GROWN AT ROOM TEMPERATURE IN 10 UL HANGING DROPS OF EQUAL VOLUMES OF PROTEIN/INHIBITOR COMPLEX AND THE PRECIPITANT OF 0.75, 1.0 1.5 2.0 M NACL AT PH'S 4.8, 5.0 AND 5.2 (0.1 M ACETATE BUFFER) AND AT PH'S 5.4, 5.6 AND 5.8 (0.1 M CITRATE BUFFER)., vapor diffusion - hanging drop 4.8-5.4, 5.0-5.6, 5.2-5.8 diffrn_source database_2 struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Data collection Database references Derived calculations Data collection 1 0 1997-04-21 1 1 2008-03-24 1 2 2011-07-13 1 3 2012-02-22 1 4 2018-03-07 1 5 2021-11-03 1 6 2024-02-07 _diffrn_source.source _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1996-12-10 REL UNI 4-CYANO-N-(3-CYCLOPROPYL(5,6,7,8,9,10-HEXAHYDRO-4-HYDROXY-2-OXO-CYCLOOCTA[B]PYRAN-3-YL)METHYL)PHENYL BENZENSULFONAMIDE HOH water UNI 1 2 UNI UNI 100 B HOH 303 3 HOH HOH 303 A HOH 309 3 HOH HOH 309 A HOH 315 3 HOH HOH 315 A HOH 316 3 HOH HOH 316 A HOH 317 3 HOH HOH 317 A HOH 318 3 HOH HOH 318 A HOH 319 3 HOH HOH 319 A HOH 320 3 HOH HOH 320 A HOH 322 3 HOH HOH 322 A HOH 324 3 HOH HOH 324 A HOH 325 3 HOH HOH 325 A HOH 326 3 HOH HOH 326 A HOH 327 3 HOH HOH 327 A HOH 328 3 HOH HOH 328 A HOH 329 3 HOH HOH 329 A HOH 330 3 HOH HOH 330 A HOH 331 3 HOH HOH 331 A HOH 334 3 HOH HOH 334 A HOH 338 3 HOH HOH 338 A HOH 346 3 HOH HOH 346 A HOH 347 3 HOH HOH 347 A HOH 348 3 HOH HOH 348 A HOH 349 3 HOH HOH 349 A HOH 350 3 HOH HOH 350 A HOH 351 3 HOH HOH 351 A HOH 352 3 HOH HOH 352 A HOH 353 3 HOH HOH 353 A HOH 365 3 HOH HOH 365 A HOH 368 3 HOH HOH 368 A HOH 369 3 HOH HOH 369 A HOH 370 3 HOH HOH 370 A HOH 372 3 HOH HOH 372 A HOH 373 3 HOH HOH 373 A HOH 374 3 HOH HOH 374 A HOH 375 3 HOH HOH 375 A HOH 384 3 HOH HOH 384 A HOH 385 3 HOH HOH 385 A HOH 386 3 HOH HOH 386 A HOH 387 3 HOH HOH 387 A HOH 388 3 HOH HOH 388 A HOH 389 3 HOH HOH 389 A HOH 390 3 HOH HOH 390 A HOH 391 3 HOH HOH 391 A HOH 392 3 HOH HOH 392 A HOH 393 3 HOH HOH 393 A HOH 400 3 HOH HOH 400 A HOH 418 3 HOH HOH 418 A HOH 419 3 HOH HOH 419 A HOH 420 3 HOH HOH 420 A HOH 421 3 HOH HOH 421 A HOH 422 3 HOH HOH 422 A HOH 424 3 HOH HOH 424 A HOH 425 3 HOH HOH 425 A HOH 426 3 HOH HOH 426 A HOH 428 3 HOH HOH 428 A HOH 430 3 HOH HOH 430 A HOH 431 3 HOH HOH 431 A HOH 439 3 HOH HOH 439 A HOH 440 3 HOH HOH 440 A HOH 444 3 HOH HOH 444 A HOH 445 3 HOH HOH 445 A HOH 446 3 HOH HOH 446 A HOH 447 3 HOH HOH 447 A HOH 449 3 HOH HOH 449 A HOH 452 3 HOH HOH 452 A HOH 455 3 HOH HOH 455 A HOH 456 3 HOH HOH 456 A HOH 457 3 HOH HOH 457 A HOH 301 3 HOH HOH 301 B HOH 302 3 HOH HOH 302 B HOH 304 3 HOH HOH 304 B HOH 305 3 HOH HOH 305 B HOH 306 3 HOH HOH 306 B HOH 307 3 HOH HOH 307 B HOH 308 3 HOH HOH 308 B HOH 310 3 HOH HOH 310 B HOH 311 3 HOH HOH 311 B HOH 312 3 HOH HOH 312 B HOH 313 3 HOH HOH 313 B HOH 314 3 HOH HOH 314 B HOH 321 3 HOH HOH 321 B HOH 323 3 HOH HOH 323 B HOH 332 3 HOH HOH 332 B HOH 333 3 HOH HOH 333 B HOH 335 3 HOH HOH 335 B HOH 336 3 HOH HOH 336 B HOH 337 3 HOH HOH 337 B HOH 339 3 HOH HOH 339 B HOH 340 3 HOH HOH 340 B HOH 341 3 HOH HOH 341 B HOH 342 3 HOH HOH 342 B HOH 343 3 HOH HOH 343 B HOH 344 3 HOH HOH 344 B HOH 345 3 HOH HOH 345 B HOH 354 3 HOH HOH 354 B HOH 355 3 HOH HOH 355 B HOH 356 3 HOH HOH 356 B HOH 357 3 HOH HOH 357 B HOH 358 3 HOH HOH 358 B HOH 359 3 HOH HOH 359 B HOH 360 3 HOH HOH 360 B HOH 361 3 HOH HOH 361 B HOH 362 3 HOH HOH 362 B HOH 363 3 HOH HOH 363 B HOH 364 3 HOH HOH 364 B HOH 366 3 HOH HOH 366 B HOH 367 3 HOH HOH 367 B HOH 371 3 HOH HOH 371 B HOH 376 3 HOH HOH 376 B HOH 377 3 HOH HOH 377 B HOH 378 3 HOH HOH 378 B HOH 379 3 HOH HOH 379 B HOH 380 3 HOH HOH 380 B HOH 381 3 HOH HOH 381 B HOH 382 3 HOH HOH 382 B HOH 383 3 HOH HOH 383 B HOH 394 3 HOH HOH 394 B HOH 395 3 HOH HOH 395 B HOH 396 3 HOH HOH 396 B HOH 397 3 HOH HOH 397 B HOH 398 3 HOH HOH 398 B HOH 399 3 HOH HOH 399 B HOH 401 3 HOH HOH 401 B HOH 402 3 HOH HOH 402 B HOH 403 3 HOH HOH 403 B HOH 404 3 HOH HOH 404 B HOH 405 3 HOH HOH 405 B HOH 406 3 HOH HOH 406 B HOH 407 3 HOH HOH 407 B HOH 408 3 HOH HOH 408 B HOH 409 3 HOH HOH 409 B HOH 410 3 HOH HOH 410 B HOH 411 3 HOH HOH 411 B HOH 412 3 HOH HOH 412 B HOH 413 3 HOH HOH 413 B HOH 414 3 HOH HOH 414 B HOH 415 3 HOH HOH 415 B HOH 416 3 HOH HOH 416 B HOH 417 3 HOH HOH 417 B HOH 423 3 HOH HOH 423 B HOH 427 3 HOH HOH 427 B HOH 429 3 HOH HOH 429 B HOH 432 3 HOH HOH 432 B HOH 433 3 HOH HOH 433 B HOH 434 3 HOH HOH 434 B HOH 435 3 HOH HOH 435 B HOH 436 3 HOH HOH 436 B HOH 437 3 HOH HOH 437 B HOH 438 3 HOH HOH 438 B HOH 441 3 HOH HOH 441 B HOH 442 3 HOH HOH 442 B HOH 443 3 HOH HOH 443 B HOH 448 3 HOH HOH 448 B HOH 450 3 HOH HOH 450 B HOH 451 3 HOH HOH 451 B HOH 453 3 HOH HOH 453 B HOH 454 3 HOH HOH 454 B HOH 458 3 HOH HOH 458 B HOH 459 3 HOH HOH 459 B HOH 460 3 HOH HOH 460 B HOH 461 3 HOH HOH 461 B HOH 462 3 HOH HOH 462 B HOH 463 3 HOH HOH 463 B HOH 464 3 HOH HOH 464 B PRO 1 n 1 PRO 1 A GLN 2 n 2 GLN 2 A ILE 3 n 3 ILE 3 A THR 4 n 4 THR 4 A LEU 5 n 5 LEU 5 A TRP 6 n 6 TRP 6 A LYS 7 n 7 LYS 7 A ARG 8 n 8 ARG 8 A PRO 9 n 9 PRO 9 A LEU 10 n 10 LEU 10 A VAL 11 n 11 VAL 11 A THR 12 n 12 THR 12 A ILE 13 n 13 ILE 13 A LYS 14 n 14 LYS 14 A ILE 15 n 15 ILE 15 A GLY 16 n 16 GLY 16 A GLY 17 n 17 GLY 17 A GLN 18 n 18 GLN 18 A LEU 19 n 19 LEU 19 A LYS 20 n 20 LYS 20 A GLU 21 n 21 GLU 21 A ALA 22 n 22 ALA 22 A LEU 23 n 23 LEU 23 A LEU 24 n 24 LEU 24 A ASP 25 n 25 ASP 25 A THR 26 n 26 THR 26 A GLY 27 n 27 GLY 27 A ALA 28 n 28 ALA 28 A ASP 29 n 29 ASP 29 A ASP 30 n 30 ASP 30 A THR 31 n 31 THR 31 A VAL 32 n 32 VAL 32 A ILE 33 n 33 ILE 33 A GLU 34 n 34 GLU 34 A GLU 35 n 35 GLU 35 A MET 36 n 36 MET 36 A SER 37 n 37 SER 37 A LEU 38 n 38 LEU 38 A PRO 39 n 39 PRO 39 A GLY 40 n 40 GLY 40 A ARG 41 n 41 ARG 41 A TRP 42 n 42 TRP 42 A LYS 43 n 43 LYS 43 A PRO 44 n 44 PRO 44 A LYS 45 n 45 LYS 45 A MET 46 n 46 MET 46 A ILE 47 n 47 ILE 47 A GLY 48 n 48 GLY 48 A GLY 49 n 49 GLY 49 A ILE 50 n 50 ILE 50 A GLY 51 n 51 GLY 51 A GLY 52 n 52 GLY 52 A PHE 53 n 53 PHE 53 A ILE 54 n 54 ILE 54 A LYS 55 n 55 LYS 55 A VAL 56 n 56 VAL 56 A ARG 57 n 57 ARG 57 A GLN 58 n 58 GLN 58 A TYR 59 n 59 TYR 59 A ASP 60 n 60 ASP 60 A GLN 61 n 61 GLN 61 A ILE 62 n 62 ILE 62 A ILE 63 n 63 ILE 63 A ILE 64 n 64 ILE 64 A GLU 65 n 65 GLU 65 A ILE 66 n 66 ILE 66 A CYS 67 n 67 CYS 67 A GLY 68 n 68 GLY 68 A HIS 69 n 69 HIS 69 A LYS 70 n 70 LYS 70 A ALA 71 n 71 ALA 71 A ILE 72 n 72 ILE 72 A GLY 73 n 73 GLY 73 A THR 74 n 74 THR 74 A VAL 75 n 75 VAL 75 A LEU 76 n 76 LEU 76 A VAL 77 n 77 VAL 77 A GLY 78 n 78 GLY 78 A PRO 79 n 79 PRO 79 A THR 80 n 80 THR 80 A PRO 81 n 81 PRO 81 A VAL 82 n 82 VAL 82 A ASN 83 n 83 ASN 83 A ILE 84 n 84 ILE 84 A ILE 85 n 85 ILE 85 A GLY 86 n 86 GLY 86 A ARG 87 n 87 ARG 87 A ASN 88 n 88 ASN 88 A LEU 89 n 89 LEU 89 A LEU 90 n 90 LEU 90 A THR 91 n 91 THR 91 A GLN 92 n 92 GLN 92 A ILE 93 n 93 ILE 93 A GLY 94 n 94 GLY 94 A CYS 95 n 95 CYS 95 A THR 96 n 96 THR 96 A LEU 97 n 97 LEU 97 A ASN 98 n 98 ASN 98 A PHE 99 n 99 PHE 99 A PRO 1 n 1 PRO 1 B GLN 2 n 2 GLN 2 B ILE 3 n 3 ILE 3 B THR 4 n 4 THR 4 B LEU 5 n 5 LEU 5 B TRP 6 n 6 TRP 6 B LYS 7 n 7 LYS 7 B ARG 8 n 8 ARG 8 B PRO 9 n 9 PRO 9 B LEU 10 n 10 LEU 10 B VAL 11 n 11 VAL 11 B THR 12 n 12 THR 12 B ILE 13 n 13 ILE 13 B LYS 14 n 14 LYS 14 B ILE 15 n 15 ILE 15 B GLY 16 n 16 GLY 16 B GLY 17 n 17 GLY 17 B GLN 18 n 18 GLN 18 B LEU 19 n 19 LEU 19 B LYS 20 n 20 LYS 20 B GLU 21 n 21 GLU 21 B ALA 22 n 22 ALA 22 B LEU 23 n 23 LEU 23 B LEU 24 n 24 LEU 24 B ASP 25 n 25 ASP 25 B THR 26 n 26 THR 26 B GLY 27 n 27 GLY 27 B ALA 28 n 28 ALA 28 B ASP 29 n 29 ASP 29 B ASP 30 n 30 ASP 30 B THR 31 n 31 THR 31 B VAL 32 n 32 VAL 32 B ILE 33 n 33 ILE 33 B GLU 34 n 34 GLU 34 B GLU 35 n 35 GLU 35 B MET 36 n 36 MET 36 B SER 37 n 37 SER 37 B LEU 38 n 38 LEU 38 B PRO 39 n 39 PRO 39 B GLY 40 n 40 GLY 40 B ARG 41 n 41 ARG 41 B TRP 42 n 42 TRP 42 B LYS 43 n 43 LYS 43 B PRO 44 n 44 PRO 44 B LYS 45 n 45 LYS 45 B MET 46 n 46 MET 46 B ILE 47 n 47 ILE 47 B GLY 48 n 48 GLY 48 B GLY 49 n 49 GLY 49 B ILE 50 n 50 ILE 50 B GLY 51 n 51 GLY 51 B GLY 52 n 52 GLY 52 B PHE 53 n 53 PHE 53 B ILE 54 n 54 ILE 54 B LYS 55 n 55 LYS 55 B VAL 56 n 56 VAL 56 B ARG 57 n 57 ARG 57 B GLN 58 n 58 GLN 58 B TYR 59 n 59 TYR 59 B ASP 60 n 60 ASP 60 B GLN 61 n 61 GLN 61 B ILE 62 n 62 ILE 62 B ILE 63 n 63 ILE 63 B ILE 64 n 64 ILE 64 B GLU 65 n 65 GLU 65 B ILE 66 n 66 ILE 66 B CYS 67 n 67 CYS 67 B GLY 68 n 68 GLY 68 B HIS 69 n 69 HIS 69 B LYS 70 n 70 LYS 70 B ALA 71 n 71 ALA 71 B ILE 72 n 72 ILE 72 B GLY 73 n 73 GLY 73 B THR 74 n 74 THR 74 B VAL 75 n 75 VAL 75 B LEU 76 n 76 LEU 76 B VAL 77 n 77 VAL 77 B GLY 78 n 78 GLY 78 B PRO 79 n 79 PRO 79 B THR 80 n 80 THR 80 B PRO 81 n 81 PRO 81 B VAL 82 n 82 VAL 82 B ASN 83 n 83 ASN 83 B ILE 84 n 84 ILE 84 B ILE 85 n 85 ILE 85 B GLY 86 n 86 GLY 86 B ARG 87 n 87 ARG 87 B ASN 88 n 88 ASN 88 B LEU 89 n 89 LEU 89 B LEU 90 n 90 LEU 90 B THR 91 n 91 THR 91 B GLN 92 n 92 GLN 92 B ILE 93 n 93 ILE 93 B GLY 94 n 94 GLY 94 B CYS 95 n 95 CYS 95 B THR 96 n 96 THR 96 B LEU 97 n 97 LEU 97 B ASN 98 n 98 ASN 98 B PHE 99 n 99 PHE 99 B author_and_software_defined_assembly PISA 2 dimeric 4870 -33 9240 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 3 A N ILE 3 B O LEU 97 B O LEU 97 B N ASN 98 B N ASN 98 A O THR 96 A O THR 96 A N LEU 97 A N LEU 97 B O ILE 3 B O ILE 3 A O PRO 9 A O PRO 9 A N LEU 24 A N LEU 24 A N LEU 23 A N LEU 23 A O ASN 83 A O ASN 83 A O ILE 84 A O ILE 84 A N VAL 32 A N VAL 32 A O ILE 47 A O ILE 47 A N ILE 54 A N ILE 54 A N TYR 59 A N TYR 59 A O VAL 75 A O VAL 75 B O PRO 9 B O PRO 9 B N LEU 24 B N LEU 24 B N LEU 23 B N LEU 23 B O ASN 83 B O ASN 83 B O ILE 84 B O ILE 84 B N VAL 32 B N VAL 32 B O ILE 47 B O ILE 47 B N ILE 54 B N ILE 54 B N TYR 59 B N TYR 59 B O VAL 75 B O VAL 75 1 A CD LYS 7 A CD LYS 7 1 Y 1 A CE LYS 7 A CE LYS 7 1 Y 1 A NZ LYS 7 A NZ LYS 7 1 Y 1 A CD LYS 14 A CD LYS 14 1 Y 1 A CE LYS 14 A CE LYS 14 1 Y 1 A NZ LYS 14 A NZ LYS 14 1 Y 1 A CG ARG 41 A CG ARG 41 1 Y 1 A CD ARG 41 A CD ARG 41 1 Y 1 A NE ARG 41 A NE ARG 41 1 Y 1 A CZ ARG 41 A CZ ARG 41 1 Y 1 A NH1 ARG 41 A NH1 ARG 41 1 Y 1 A NH2 ARG 41 A NH2 ARG 41 1 Y 1 A CG LYS 43 A CG LYS 43 1 Y 1 A CD LYS 43 A CD LYS 43 1 Y 1 A CE LYS 43 A CE LYS 43 1 Y 1 A NZ LYS 43 A NZ LYS 43 1 Y 1 B CD LYS 7 B CD LYS 7 1 Y 1 B CE LYS 7 B CE LYS 7 1 Y 1 B NZ LYS 7 B NZ LYS 7 1 Y 1 B CD LYS 43 B CD LYS 43 1 Y 1 B CE LYS 43 B CE LYS 43 1 Y 1 B NZ LYS 43 B NZ LYS 43 1 Y 1 B CD LYS 70 B CD LYS 70 1 Y 1 B CE LYS 70 B CE LYS 70 1 Y 1 B NZ LYS 70 B NZ LYS 70 1 Y 1 A GLN 61 32.37 80.22 1 A CYS 67 32.03 80.26 1 B LEU 5 -93.67 36.13 1 B CYS 67 32.18 66.57 0.1790000 2.5 10.0 7560 82.9 1 2.0 MOLECULAR REPLACEMENT 2.5 10.0 164 1691 36 0 1491 2.5 10.0 1HPO 9119 0.0 0.1320000 1 8.2 7. 98.8 0.5340000 2.5 2.64 2.2 1 5.5 92.5 phasing MERLOT refinement CEDAR data reduction XENGEN data scaling XENGEN HIV-1 PROTEASE TRIPLE MUTANT/U103265 COMPLEX 1 N N 1 N N 2 N N 3 N N 3 N N A GLY 86 A GLY 86 HELX_P A THR 91 A THR 91 1 H1 6 B GLY 86 B GLY 86 HELX_P B THR 91 B THR 91 1 H2 6 HYDROLASE HYDROLASE, ACID PROTEASE, ASPARTYL PROTEASE POL_HV1BR UNP 1 1 P03367 FFREDLAFLQGKAREFSSEQTRANSPTISSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVT IKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQ IGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRK LVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGW KGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYE LHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEP VHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPI QKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAASRETKLGKAGYVTNRGRQKVVTLTDTT NQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVS AGIRKVLFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVI LVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVES MNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDP LWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED 69 167 1HPO 1 99 P03367 A 1 1 99 69 167 1HPO 1 99 P03367 B 1 1 99 1 GLN engineered mutation LYS 7 1HPO A P03367 UNP 75 7 1 LEU engineered mutation ILE 33 1HPO A P03367 UNP 101 33 1 LEU engineered mutation ILE 63 1HPO A P03367 UNP 131 63 2 GLN engineered mutation LYS 7 1HPO B P03367 UNP 75 7 2 LEU engineered mutation ILE 33 1HPO B P03367 UNP 101 33 2 LEU engineered mutation ILE 63 1HPO B P03367 UNP 131 63 4 2 3 3 2 3 3 anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A PRO 1 A PRO 1 A LEU 5 A LEU 5 B CYS 95 B CYS 95 B PHE 99 B PHE 99 A CYS 95 A CYS 95 A PHE 99 A PHE 99 B PRO 1 B PRO 1 B LEU 5 B LEU 5 A PRO 9 A PRO 9 A ILE 15 A ILE 15 A GLN 18 A GLN 18 A LEU 24 A LEU 24 A ALA 22 A ALA 22 A LEU 24 A LEU 24 A ASN 83 A ASN 83 A GLY 86 A GLY 86 A ASP 30 A ASP 30 A VAL 32 A VAL 32 A LYS 43 A LYS 43 A GLY 48 A GLY 48 A GLY 52 A GLY 52 A TYR 59 A TYR 59 A VAL 75 A VAL 75 A VAL 77 A VAL 77 B PRO 9 B PRO 9 B ILE 15 B ILE 15 B GLN 18 B GLN 18 B LEU 24 B LEU 24 B ALA 22 B ALA 22 B LEU 24 B LEU 24 B ASN 83 B ASN 83 B GLY 86 B GLY 86 B ASP 30 B ASP 30 B VAL 32 B VAL 32 B LYS 43 B LYS 43 B GLY 48 B GLY 48 B GLY 52 B GLY 52 B TYR 59 B TYR 59 B VAL 75 B VAL 75 B VAL 77 B VAL 77 BINDING SITE FOR RESIDUE UNI B 100 B UNI 100 Software 17 A ARG 8 A ARG 8 17 1_555 A ASP 25 A ASP 25 17 1_555 A GLY 27 A GLY 27 17 1_555 A ALA 28 A ALA 28 17 1_555 A GLY 49 A GLY 49 17 1_555 A ILE 50 A ILE 50 17 1_555 A ILE 84 A ILE 84 17 1_555 B ASP 25 B ASP 25 17 1_555 B GLY 27 B GLY 27 17 1_555 B ALA 28 B ALA 28 17 1_555 B ASP 29 B ASP 29 17 1_555 B GLY 48 B GLY 48 17 1_555 B GLY 49 B GLY 49 17 1_555 B ILE 50 B ILE 50 17 1_555 B ILE 84 B ILE 84 17 1_555 B HOH 302 E HOH 17 1_555 B HOH 304 E HOH 17 1_555 18 P 21 21 2