0.022556 0.000000 0.000000 0.000000 0.022285 0.000000 0.000000 0.000000 0.012339 0.000000 0.000000 0.000000 Burkhard, P. Meier, M. Lustig, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 48 90.00 90.00 90.00 44.334 44.874 81.043 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking Pb 2 207.200 LEAD (II) ION non-polymer O4 S -2 96.063 SULFATE ION non-polymer C8 H11 N O7 233.175 n N-SUCCINYL-ASPARTIC ACID 2-[(4-oxidanyl-4-oxidanylidene-butanoyl)amino]butanedioic acid L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N C N 48 N O N 49 N O N 50 N O N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N O N 61 N H N 62 N H N 63 N N N 64 S C N 65 N C N 66 N O N 67 S C N 68 N C N 69 N C N 70 N C N 71 N O N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N N N 86 S C N 87 N C N 88 N O N 89 N C N 90 N C N 91 N C N 92 N C N 93 N O N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 S C N 109 N C N 110 N O N 111 N C N 112 N C N 113 N C N 114 N C N 115 N N N 116 N O N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N PB N 133 N S N 134 N O N 135 N O N 136 N O N 137 N O N 138 N O N 139 N C N 140 N O N 141 N C N 142 N C N 143 N C N 144 N O N 145 N N N 146 S C N 147 N C N 148 N C N 149 N O N 150 N O N 151 N C N 152 N O N 153 N O N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N doub N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N doub N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N doub N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N doub N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N doub N 131 N sing N 132 N sing N 133 N sing N 134 N doub N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing US Protein Sci. PRCIEI 0795 0961-8368 9 2294 2301 11206050 Design of a minimal protein oligomerization domain by a structural approach. 2000 10.2210/pdb1hqj/pdb pdb_00001hqj 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 100 1 WIGGLER CCD 1999-11-05 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 0.951 1.0 X11 EMBL/DESY, HAMBURG 0.951 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 2031.294 ZJU-GLU-LEU-GLU-ALA-ARG-ILE-ARG-GLU-LEU-GLU-ALA-ARG-ILE-LYS-NH2 12 syn polymer 207.200 LEAD (II) ION 9 syn non-polymer 96.063 SULFATE ION 4 syn non-polymer 18.015 water 147 nat water no yes (ZJU)ELERRIRELEARIK DELERRIRELEARIK A,B,C,D,E,F,G,H,I,J,K,L polypeptide(L) n n n n n n n n n n n n n n n 1 1.74 29.28 VAPOR DIFFUSION, HANGING DROP 5.6 Ammonium Sulfate, Sodium Acetate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 software diffrn_source entity pdbx_entity_src_syn struct_biol entity software struct_conn atom_site atom_site_anisotrop chem_comp chem_comp_atom chem_comp_bond database_2 entity entity_poly entity_poly_seq pdbx_entity_nonpoly pdbx_entity_src_syn pdbx_nonpoly_scheme pdbx_poly_seq_scheme pdbx_struct_assembly_gen pdbx_struct_conn_angle pdbx_validate_close_contact struct_asym struct_conf struct_conn struct_ref struct_site struct_site_gen repository Initial release Version format compliance Version format compliance Refinement description Data collection Data collection Source and taxonomy Structure summary Data collection Derived calculations Refinement description Structure summary Advisory Atomic model Data collection Database references Derived calculations Non-polymer description Polymer sequence Source and taxonomy Structure summary 1 0 2001-03-14 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 1 4 2018-10-03 1 5 2018-10-10 1 6 2019-07-24 2 0 2024-04-24 _software.name _diffrn_source.pdbx_synchrotron_site _entity.formula_weight _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.organism_scientific _entity.formula_weight _software.name _struct_conn.pdbx_leaving_atom_flag _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.group_PDB _atom_site.label_alt_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.occupancy _atom_site.type_symbol _atom_site_anisotrop.U[1][1] _atom_site_anisotrop.U[1][2] _atom_site_anisotrop.U[1][3] _atom_site_anisotrop.U[2][2] _atom_site_anisotrop.U[2][3] _atom_site_anisotrop.U[3][3] _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_atom_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_label_alt_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_atom_id _atom_site_anisotrop.pdbx_label_comp_id _atom_site_anisotrop.pdbx_label_seq_id _atom_site_anisotrop.type_symbol _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type _database_2.pdbx_DOI _database_2.pdbx_database_accession _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly_seq.mon_id _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_struct_assembly_gen.asym_id_list _struct_ref.pdbx_align_begin The Coiled-Coil Trigger Site of the Rod Domain of Cortexillin I Control Protein Gcn4, Amino Acid Biosynthesis Regulatory Protein; Engineered: Yes; Mutation: L5I, V9I, L12I, N16I, L19I, V23I, L26I, V30I (I At Heptad A Positions, I At Heptad D Positions) RCSB Y RCSB 2000-12-18 REL PB LEAD (II) ION SO4 SULFATE ION HOH water Neosystem 32630 synthetic construct sample 1 15 PB 3 2 PB PB 2003 A SO4 1 3 SO4 SO4 1001 B SO4 4 3 SO4 SO4 1004 C PB 2 2 PB PB 2002 D PB 7 2 PB PB 2007 E SO4 2 3 SO4 SO4 1002 F PB 4 2 PB PB 2004 F PB 1 2 PB PB 2001 G PB 8 2 PB PB 2008 H SO4 3 3 SO4 SO4 1003 I PB 6 2 PB PB 2006 I PB 5 2 PB PB 2005 K PB 9 2 PB PB 2009 L HOH 2 4 HOH HOH 2004 A HOH 17 4 HOH HOH 2005 A HOH 26 4 HOH HOH 2006 A HOH 33 4 HOH HOH 2007 A HOH 46 4 HOH HOH 2008 A HOH 47 4 HOH HOH 2009 A HOH 53 4 HOH HOH 2010 A HOH 56 4 HOH HOH 2011 A HOH 76 4 HOH HOH 2012 A HOH 90 4 HOH HOH 2013 A HOH 96 4 HOH HOH 2014 A HOH 106 4 HOH HOH 2015 A HOH 114 4 HOH HOH 2016 A HOH 120 4 HOH HOH 2017 A HOH 126 4 HOH HOH 2018 A HOH 141 4 HOH HOH 2019 A HOH 1 4 HOH HOH 1002 B HOH 22 4 HOH HOH 1003 B HOH 40 4 HOH HOH 1004 B HOH 42 4 HOH HOH 1005 B HOH 49 4 HOH HOH 1006 B HOH 87 4 HOH HOH 1007 B HOH 109 4 HOH HOH 1008 B HOH 122 4 HOH HOH 1009 B HOH 131 4 HOH HOH 1010 B HOH 140 4 HOH HOH 1011 B HOH 142 4 HOH HOH 1012 B HOH 3 4 HOH HOH 1005 C HOH 13 4 HOH HOH 1006 C HOH 31 4 HOH HOH 1007 C HOH 51 4 HOH HOH 1008 C HOH 54 4 HOH HOH 1009 C HOH 64 4 HOH HOH 1010 C HOH 84 4 HOH HOH 1011 C HOH 86 4 HOH HOH 1012 C HOH 91 4 HOH HOH 1013 C HOH 102 4 HOH HOH 1014 C HOH 113 4 HOH HOH 1015 C HOH 119 4 HOH HOH 1016 C HOH 137 4 HOH HOH 1017 C HOH 8 4 HOH HOH 2003 D HOH 36 4 HOH HOH 2004 D HOH 58 4 HOH HOH 2005 D HOH 61 4 HOH HOH 2006 D HOH 75 4 HOH HOH 2007 D HOH 94 4 HOH HOH 2008 D HOH 125 4 HOH HOH 2009 D HOH 135 4 HOH HOH 2010 D HOH 6 4 HOH HOH 2008 E HOH 9 4 HOH HOH 2009 E HOH 14 4 HOH HOH 2010 E HOH 34 4 HOH HOH 2011 E HOH 55 4 HOH HOH 2012 E HOH 63 4 HOH HOH 2013 E HOH 68 4 HOH HOH 2014 E HOH 72 4 HOH HOH 2015 E HOH 112 4 HOH HOH 2016 E HOH 121 4 HOH HOH 2017 E HOH 123 4 HOH HOH 2018 E HOH 127 4 HOH HOH 2019 E HOH 128 4 HOH HOH 2020 E HOH 145 4 HOH HOH 2021 E HOH 11 4 HOH HOH 2005 F HOH 20 4 HOH HOH 2006 F HOH 48 4 HOH HOH 2007 F HOH 85 4 HOH HOH 2008 F HOH 88 4 HOH HOH 2009 F HOH 101 4 HOH HOH 2010 F HOH 105 4 HOH HOH 2011 F HOH 132 4 HOH HOH 2012 F HOH 138 4 HOH HOH 2013 F HOH 139 4 HOH HOH 2014 F HOH 4 4 HOH HOH 2002 G HOH 27 4 HOH HOH 2003 G HOH 28 4 HOH HOH 2004 G HOH 35 4 HOH HOH 2005 G HOH 39 4 HOH HOH 2006 G HOH 65 4 HOH HOH 2007 G HOH 66 4 HOH HOH 2008 G HOH 77 4 HOH HOH 2009 G HOH 78 4 HOH HOH 2010 G HOH 82 4 HOH HOH 2011 G HOH 83 4 HOH HOH 2012 G HOH 89 4 HOH HOH 2013 G HOH 115 4 HOH HOH 2014 G HOH 124 4 HOH HOH 2015 G HOH 136 4 HOH HOH 2016 G HOH 12 4 HOH HOH 2009 H HOH 38 4 HOH HOH 2010 H HOH 43 4 HOH HOH 2011 H HOH 67 4 HOH HOH 2012 H HOH 73 4 HOH HOH 2013 H HOH 74 4 HOH HOH 2014 H HOH 79 4 HOH HOH 2015 H HOH 99 4 HOH HOH 2016 H HOH 100 4 HOH HOH 2017 H HOH 103 4 HOH HOH 2018 H HOH 104 4 HOH HOH 2019 H HOH 108 4 HOH HOH 2020 H HOH 111 4 HOH HOH 2021 H HOH 146 4 HOH HOH 2022 H HOH 5 4 HOH HOH 2007 I HOH 29 4 HOH HOH 2008 I HOH 32 4 HOH HOH 2009 I HOH 41 4 HOH HOH 2010 I HOH 45 4 HOH HOH 2011 I HOH 52 4 HOH HOH 2012 I HOH 59 4 HOH HOH 2013 I HOH 93 4 HOH HOH 2014 I HOH 130 4 HOH HOH 2015 I HOH 133 4 HOH HOH 2016 I HOH 16 4 HOH HOH 17 J HOH 21 4 HOH HOH 18 J HOH 30 4 HOH HOH 19 J HOH 44 4 HOH HOH 20 J HOH 50 4 HOH HOH 21 J HOH 62 4 HOH HOH 22 J HOH 70 4 HOH HOH 23 J HOH 98 4 HOH HOH 24 J HOH 107 4 HOH HOH 25 J HOH 134 4 HOH HOH 26 J HOH 147 4 HOH HOH 27 J HOH 7 4 HOH HOH 2006 K HOH 19 4 HOH HOH 2007 K HOH 25 4 HOH HOH 2008 K HOH 57 4 HOH HOH 2009 K HOH 60 4 HOH HOH 2010 K HOH 71 4 HOH HOH 2011 K HOH 80 4 HOH HOH 2012 K HOH 95 4 HOH HOH 2013 K HOH 97 4 HOH HOH 2014 K HOH 116 4 HOH HOH 2015 K HOH 117 4 HOH HOH 2016 K HOH 129 4 HOH HOH 2017 K HOH 144 4 HOH HOH 2018 K HOH 10 4 HOH HOH 2010 L HOH 15 4 HOH HOH 2011 L HOH 18 4 HOH HOH 2012 L HOH 23 4 HOH HOH 2013 L HOH 24 4 HOH HOH 2014 L HOH 37 4 HOH HOH 2015 L HOH 69 4 HOH HOH 2016 L HOH 81 4 HOH HOH 2017 L HOH 92 4 HOH HOH 2018 L HOH 110 4 HOH HOH 2019 L HOH 118 4 HOH HOH 2020 L HOH 143 4 HOH HOH 2021 L SIN 1 n 1 ZJU 2 A GLU 3 n 2 GLU 3 A LEU 4 n 3 LEU 4 A GLU 5 n 4 GLU 5 A ALA 6 n 5 ARG 6 A ARG 7 n 6 ARG 7 A ILE 8 n 7 ILE 8 A ARG 9 n 8 ARG 9 A GLU 10 n 9 GLU 10 A LEU 11 n 10 LEU 11 A GLU 12 n 11 GLU 12 A ALA 13 n 12 ALA 13 A ARG 14 n 13 ARG 14 A ILE 15 n 14 ILE 15 A LYS 16 n 15 LYS 16 A SIN 1 n 1 ZJU 2 B GLU 3 n 2 GLU 3 B LEU 4 n 3 LEU 4 B GLU 5 n 4 GLU 5 B SER 6 n 5 ARG 6 B ARG 7 n 6 ARG 7 B ILE 8 n 7 ILE 8 B ARG 9 n 8 ARG 9 B GLU 10 n 9 GLU 10 B LEU 11 n 10 LEU 11 B GLU 12 n 11 GLU 12 B ALA 13 n 12 ALA 13 B ARG 14 n 13 ARG 14 B ILE 15 n 14 ILE 15 B LYS 16 n 15 LYS 16 B SIN 1 n 1 ZJU 2 C GLU 3 n 2 GLU 3 C LEU 4 n 3 LEU 4 C GLU 5 n 4 GLU 5 C ARG 6 n 5 ARG 6 C ARG 7 n 6 ARG 7 C ILE 8 n 7 ILE 8 C ARG 9 n 8 ARG 9 C GLU 10 n 9 GLU 10 C LEU 11 n 10 LEU 11 C GLU 12 n 11 GLU 12 C ALA 13 n 12 ALA 13 C ARG 14 n 13 ARG 14 C ILE 15 n 14 ILE 15 C LYS 16 n 15 LYS 16 C SIN 1 n 1 ZJU 2 D GLU 3 n 2 GLU 3 D LEU 4 n 3 LEU 4 D GLU 5 n 4 GLU 5 D ALA 6 n 5 ARG 6 D ARG 7 n 6 ARG 7 D ILE 8 n 7 ILE 8 D ARG 9 n 8 ARG 9 D GLU 10 n 9 GLU 10 D LEU 11 n 10 LEU 11 D GLU 12 n 11 GLU 12 D ALA 13 n 12 ALA 13 D ARG 14 n 13 ARG 14 D ILE 15 n 14 ILE 15 D LYS 16 n 15 LYS 16 D SIN 1 n 1 ZJU 2 E GLU 3 n 2 GLU 3 E LEU 4 n 3 LEU 4 E GLU 5 n 4 GLU 5 E ARG 6 n 5 ARG 6 E ARG 7 n 6 ARG 7 E ILE 8 n 7 ILE 8 E ARG 9 n 8 ARG 9 E GLU 10 n 9 GLU 10 E LEU 11 n 10 LEU 11 E GLU 12 n 11 GLU 12 E ALA 13 n 12 ALA 13 E ARG 14 n 13 ARG 14 E ILE 15 n 14 ILE 15 E LYS 16 n 15 LYS 16 E SIN 1 n 1 ZJU 2 F GLU 3 n 2 GLU 3 F LEU 4 n 3 LEU 4 F GLU 5 n 4 GLU 5 F ALA 6 n 5 ARG 6 F ARG 7 n 6 ARG 7 F ILE 8 n 7 ILE 8 F ARG 9 n 8 ARG 9 F GLU 10 n 9 GLU 10 F LEU 11 n 10 LEU 11 F GLU 12 n 11 GLU 12 F ALA 13 n 12 ALA 13 F ARG 14 n 13 ARG 14 F ILE 15 n 14 ILE 15 F LYS 16 n 15 LYS 16 F SIN 1 n 1 ZJU 2 G GLU 3 n 2 GLU 3 G LEU 4 n 3 LEU 4 G GLU 5 n 4 GLU 5 G ALA 6 n 5 ARG 6 G ARG 7 n 6 ARG 7 G ILE 8 n 7 ILE 8 G ARG 9 n 8 ARG 9 G GLU 10 n 9 GLU 10 G LEU 11 n 10 LEU 11 G GLU 12 n 11 GLU 12 G ALA 13 n 12 ALA 13 G ARG 14 n 13 ARG 14 G ILE 15 n 14 ILE 15 G LYS 16 n 15 LYS 16 G SIN 1 n 1 ZJU 2 H GLU 3 n 2 GLU 3 H LEU 4 n 3 LEU 4 H GLU 5 n 4 GLU 5 H ALA 6 n 5 ARG 6 H ARG 7 n 6 ARG 7 H ILE 8 n 7 ILE 8 H ARG 9 n 8 ARG 9 H GLU 10 n 9 GLU 10 H LEU 11 n 10 LEU 11 H GLU 12 n 11 GLU 12 H ALA 13 n 12 ALA 13 H ARG 14 n 13 ARG 14 H ILE 15 n 14 ILE 15 H LYS 16 n 15 LYS 16 H SIN 1 n 1 ZJU 2 I GLU 3 n 2 GLU 3 I LEU 4 n 3 LEU 4 I GLU 5 n 4 GLU 5 I ALA 6 n 5 ARG 6 I ARG 7 n 6 ARG 7 I ILE 8 n 7 ILE 8 I ARG 9 n 8 ARG 9 I GLU 10 n 9 GLU 10 I LEU 11 n 10 LEU 11 I GLU 12 n 11 GLU 12 I ALA 13 n 12 ALA 13 I ARG 14 n 13 ARG 14 I ILE 15 n 14 ILE 15 I LYS 16 n 15 LYS 16 I SIN 1 n 1 ZJU 2 J GLU 3 n 2 GLU 3 J LEU 4 n 3 LEU 4 J GLU 5 n 4 GLU 5 J ALA 6 n 5 ARG 6 J ARG 7 n 6 ARG 7 J ILE 8 n 7 ILE 8 J ARG 9 n 8 ARG 9 J GLU 10 n 9 GLU 10 J LEU 11 n 10 LEU 11 J GLU 12 n 11 GLU 12 J ALA 13 n 12 ALA 13 J ARG 14 n 13 ARG 14 J ILE 15 n 14 ILE 15 J LYS 16 n 15 LYS 16 J SIN 1 n 1 ZJU 2 K GLU 3 n 2 GLU 3 K LEU 4 n 3 LEU 4 K GLU 5 n 4 GLU 5 K ALA 6 n 5 ARG 6 K ARG 7 n 6 ARG 7 K ILE 8 n 7 ILE 8 K ARG 9 n 8 ARG 9 K GLU 10 n 9 GLU 10 K LEU 11 n 10 LEU 11 K GLU 12 n 11 GLU 12 K ALA 13 n 12 ALA 13 K ARG 14 n 13 ARG 14 K ILE 15 n 14 ILE 15 K LYS 16 n 15 LYS 16 K SIN 1 n 1 ZJU 2 L GLU 3 n 2 GLU 3 L LEU 4 n 3 LEU 4 L GLU 5 n 4 GLU 5 L SER 6 n 5 ARG 6 L ARG 7 n 6 ARG 7 L ILE 8 n 7 ILE 8 L ARG 9 n 8 ARG 9 L GLU 10 n 9 GLU 10 L LEU 11 n 10 LEU 11 L GLU 12 n 11 GLU 12 L ALA 13 n 12 ALA 13 L ARG 14 n 13 ARG 14 L ILE 15 n 14 ILE 15 L LYS 16 n 15 LYS 16 L 0.1660000 0.1700000 0.2180000 5.0 3493 author_and_software_defined_assembly PISA 3 trimeric author_and_software_defined_assembly PISA 3 trimeric author_and_software_defined_assembly PISA 3 trimeric author_and_software_defined_assembly PISA 3 trimeric software_defined_assembly PISA 12 dodecameric 2880 -14 3670 2770 -14 3760 2950 -16 3930 2850 -15 3760 15210 -89 11360 A ZJU 2 A O1 ZJU 1 1_555 K PB 2005 X PB PB 1_555 A HOH 2008 Z O HOH 1_555 63.6 A ZJU 2 A O1 ZJU 1 1_555 K PB 2005 X PB PB 1_555 K LYS 16 K NZ LYS 15 1_555 102.1 A HOH 2008 Z O HOH 1_555 K PB 2005 X PB PB 1_555 K LYS 16 K NZ LYS 15 1_555 67.9 A GLU 5 A OE1 GLU 4 1_555 L PB 2009 Y PB PB 1_555 L GLU 3 L OE2 GLU 2 1_555 156.9 A GLU 10 A A OE2 GLU 9 1_555 A PB 2003 M PB PB 1_555 C HOH 1007 BA O HOH 1_555 161.4 A GLU 10 A A OE2 GLU 9 1_555 A PB 2003 M PB PB 1_555 C HOH 1011 BA O HOH 1_555 144.0 C HOH 1007 BA O HOH 1_555 A PB 2003 M PB PB 1_555 C HOH 1011 BA O HOH 1_555 54.6 E GLU 10 E OE1 GLU 9 1_555 E PB 2007 Q PB PB 1_555 E GLU 10 E OE2 GLU 9 1_555 57.9 E GLU 10 E OE1 GLU 9 1_555 E PB 2007 Q PB PB 1_555 E HOH 2019 DA O HOH 1_555 92.7 E GLU 10 E OE2 GLU 9 1_555 E PB 2007 Q PB PB 1_555 E HOH 2019 DA O HOH 1_555 59.2 E GLU 10 E OE1 GLU 9 1_555 E PB 2007 Q PB PB 1_555 H ZJU 2 H OD1 ZJU 1 1_555 135.7 E GLU 10 E OE2 GLU 9 1_555 E PB 2007 Q PB PB 1_555 H ZJU 2 H OD1 ZJU 1 1_555 164.7 E HOH 2019 DA O HOH 1_555 E PB 2007 Q PB PB 1_555 H ZJU 2 H OD1 ZJU 1 1_555 108.6 F GLU 10 F OE1 GLU 9 1_555 H PB 2008 U PB PB 4_555 H ZJU 2 H O1 ZJU 1 1_555 72.2 G HOH 2008 FA O HOH 1_555 G PB 2001 T PB PB 1_555 K ZJU 2 K O1 ZJU 1 1_555 86.9 H HOH 2013 GA O HOH 1_555 I PB 2006 W PB PB 1_555 H HOH 2020 GA O HOH 1_555 58.1 H HOH 2013 GA O HOH 1_555 I PB 2006 W PB PB 1_555 I GLU 10 B I OE1 GLU 9 1_555 158.5 H HOH 2020 GA O HOH 1_555 I PB 2006 W PB PB 1_555 I GLU 10 B I OE1 GLU 9 1_555 143.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_455 x-1,y,z crystal symmetry operation -44.3340000000 0.0000000000 0.0000000000 1 A CG ARG 6 A CG ARG 5 1 Y 1 A CD ARG 6 A CD ARG 5 1 Y 1 A NE ARG 6 A NE ARG 5 1 Y 1 A CZ ARG 6 A CZ ARG 5 1 Y 1 A NH1 ARG 6 A NH1 ARG 5 1 Y 1 A NH2 ARG 6 A NH2 ARG 5 1 Y 1 B CD ARG 6 B CD ARG 5 1 Y 1 B NE ARG 6 B NE ARG 5 1 Y 1 B CZ ARG 6 B CZ ARG 5 1 Y 1 B NH1 ARG 6 B NH1 ARG 5 1 Y 1 B NH2 ARG 6 B NH2 ARG 5 1 Y 1 D CG ARG 6 D CG ARG 5 1 Y 1 D CD ARG 6 D CD ARG 5 1 Y 1 D NE ARG 6 D NE ARG 5 1 Y 1 D CZ ARG 6 D CZ ARG 5 1 Y 1 D NH1 ARG 6 D NH1 ARG 5 1 Y 1 D NH2 ARG 6 D NH2 ARG 5 1 Y 1 F CG ARG 6 F CG ARG 5 1 Y 1 F CD ARG 6 F CD ARG 5 1 Y 1 F NE ARG 6 F NE ARG 5 1 Y 1 F CZ ARG 6 F CZ ARG 5 1 Y 1 F NH1 ARG 6 F NH1 ARG 5 1 Y 1 F NH2 ARG 6 F NH2 ARG 5 1 Y 1 G CG ARG 6 G CG ARG 5 1 Y 1 G CD ARG 6 G CD ARG 5 1 Y 1 G NE ARG 6 G NE ARG 5 1 Y 1 G CZ ARG 6 G CZ ARG 5 1 Y 1 G NH1 ARG 6 G NH1 ARG 5 1 Y 1 G NH2 ARG 6 G NH2 ARG 5 1 Y 1 H CG ARG 6 H CG ARG 5 1 Y 1 H CD ARG 6 H CD ARG 5 1 Y 1 H NE ARG 6 H NE ARG 5 1 Y 1 H CZ ARG 6 H CZ ARG 5 1 Y 1 H NH1 ARG 6 H NH1 ARG 5 1 Y 1 H NH2 ARG 6 H NH2 ARG 5 1 Y 1 I CG ARG 6 I CG ARG 5 1 Y 1 I CD ARG 6 I CD ARG 5 1 Y 1 I NE ARG 6 I NE ARG 5 1 Y 1 I CZ ARG 6 I CZ ARG 5 1 Y 1 I NH1 ARG 6 I NH1 ARG 5 1 Y 1 I NH2 ARG 6 I NH2 ARG 5 1 Y 1 J CG ARG 6 J CG ARG 5 1 Y 1 J CD ARG 6 J CD ARG 5 1 Y 1 J NE ARG 6 J NE ARG 5 1 Y 1 J CZ ARG 6 J CZ ARG 5 1 Y 1 J NH1 ARG 6 J NH1 ARG 5 1 Y 1 J NH2 ARG 6 J NH2 ARG 5 1 Y 1 K CG ARG 6 K CG ARG 5 1 Y 1 K CD ARG 6 K CD ARG 5 1 Y 1 K NE ARG 6 K NE ARG 5 1 Y 1 K CZ ARG 6 K CZ ARG 5 1 Y 1 K NH1 ARG 6 K NH1 ARG 5 1 Y 1 K NH2 ARG 6 K NH2 ARG 5 1 Y 1 L CD ARG 6 L CD ARG 5 1 Y 1 L NE ARG 6 L NE ARG 5 1 Y 1 L CZ ARG 6 L CZ ARG 5 1 Y 1 L NH1 ARG 6 L NH1 ARG 5 1 Y 1 L NH2 ARG 6 L NH2 ARG 5 1 Y 1 H H OE2 PB GLU PB 3 2008 1.50 1 H H CD PB GLU PB 3 2008 1.65 1 H H O2 CG ZJU GLU 2 3 1.66 1 H H OE1 PB GLU PB 3 2008 1.80 1 3.19 0.50 120.30 123.49 B B B NE CZ NH1 ARG ARG ARG 14 14 14 N 1 3.25 0.50 120.30 123.55 G G G NE CZ NH1 ARG ARG ARG 14 14 14 N 0.2230000 0.1700000 1.20 10.00 1680 4131 2133 5.000 1 ENGH AND HUBER 1 1384. 1815. 1.20 10.00 147 1870 113 0 1610 0.004 0.900 12.8 1.2 30 1HQJ 42926 0.5800000 1 81.2 refinement SHELXL refinement CNS data reduction DENZO data scaling SCALEPACK phasing CNS CRYSTAL STRUCTURE OF A DE NOVO DESIGNED TRIMERIC COILED-COIL PEPTIDE 1 N N 1 N N 1 N N 1 N N 1 N N 1 N N 1 N N 1 N N 1 N N 1 N N 1 N N 1 N N 2 N N 3 N N 3 N N 2 N N 2 N N 3 N N 2 N N 2 N N 2 N N 3 N N 2 N N 2 N N 2 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N The peptide is a trimer at high ionic strength covale 1.330 both A ZJU 2 A C ZJU 1 1_555 A GLU 3 A N GLU 2 1_555 covale 1.331 both B ZJU 2 B C ZJU 1 1_555 B GLU 3 B N GLU 2 1_555 covale 1.329 both C ZJU 2 C C ZJU 1 1_555 C GLU 3 C N GLU 2 1_555 covale 1.331 both D ZJU 2 D C ZJU 1 1_555 D GLU 3 D N GLU 2 1_555 covale 1.329 both E ZJU 2 E C ZJU 1 1_555 E GLU 3 E N GLU 2 1_555 covale 1.331 both F ZJU 2 F C ZJU 1 1_555 F GLU 3 F N GLU 2 1_555 covale 1.329 both G ZJU 2 G C ZJU 1 1_555 G GLU 3 G N GLU 2 1_555 covale 1.325 both H ZJU 2 H C ZJU 1 1_555 H GLU 3 H N GLU 2 1_555 covale 1.332 both I ZJU 2 I C ZJU 1 1_555 I GLU 3 I N GLU 2 1_555 covale 1.329 both J ZJU 2 J C ZJU 1 1_555 J GLU 3 J N GLU 2 1_555 covale 1.330 both K ZJU 2 K C ZJU 1 1_555 K GLU 3 K N GLU 2 1_555 covale 1.331 both L ZJU 2 L C ZJU 1 1_555 L GLU 3 L N GLU 2 1_555 metalc 2.645 A ZJU 2 A O1 ZJU 1 1_555 K PB 2005 X PB PB 1_555 metalc 3.230 A GLU 5 A OE1 GLU 4 1_555 L PB 2009 Y PB PB 1_555 metalc 2.713 A A GLU 10 A OE2 GLU 9 1_555 A PB 2003 M PB PB 1_555 metalc 2.993 A PB 2003 M PB PB 1_555 C HOH 1007 BA O HOH 1_555 metalc 2.343 A PB 2003 M PB PB 1_555 C HOH 1011 BA O HOH 1_555 metalc 2.497 A HOH 2008 Z O HOH 1_555 K PB 2005 X PB PB 1_555 metalc 2.151 D ZJU 2 D O1 ZJU 1 1_555 D PB 2002 P PB PB 1_555 metalc 2.249 E GLU 10 E OE1 GLU 9 1_555 E PB 2007 Q PB PB 1_555 metalc 2.276 E GLU 10 E OE2 GLU 9 1_555 E PB 2007 Q PB PB 1_555 metalc 2.341 E PB 2007 Q PB PB 1_555 E HOH 2019 DA O HOH 1_555 metalc 2.308 E PB 2007 Q PB PB 1_555 H ZJU 2 H OD1 ZJU 1 1_555 metalc 2.931 F ZJU 2 F OD2 ZJU 1 1_555 F PB 2004 S PB PB 1_555 metalc 2.546 F GLU 10 F OE1 GLU 9 1_555 H PB 2008 U PB PB 4_555 metalc 2.811 G PB 2001 T PB PB 1_555 G HOH 2008 FA O HOH 1_555 metalc 2.291 G PB 2001 T PB PB 1_565 K ZJU 2 K O1 ZJU 1 1_555 metalc 2.463 H ZJU 2 H O1 ZJU 1 1_555 H PB 2008 U PB PB 1_555 metalc 3.023 H HOH 2013 GA O HOH 1_555 I PB 2006 W PB PB 1_555 metalc 2.544 H HOH 2020 GA O HOH 1_555 I PB 2006 W PB PB 1_555 metalc 2.804 B I GLU 10 I OE1 GLU 9 1_555 I PB 2006 W PB PB 1_555 metalc 2.505 K LYS 16 K NZ LYS 15 1_555 K PB 2005 X PB PB 1_555 metalc 2.572 L GLU 3 L OE2 GLU 2 1_555 L PB 2009 Y PB PB 1_555 DE NOVO PROTEIN coiled coil, de novo design, alpha-helix, trimer, DE NOVO PROTEIN 1HQJ PDB 1 1 1HQJ 2 16 1HQJ 2 16 1HQJ A 1 1 15 2 16 1HQJ 2 16 1HQJ B 1 1 15 2 16 1HQJ 2 16 1HQJ C 1 1 15 2 16 1HQJ 2 16 1HQJ D 1 1 15 2 16 1HQJ 2 16 1HQJ E 1 1 15 2 16 1HQJ 2 16 1HQJ F 1 1 15 2 16 1HQJ 2 16 1HQJ G 1 1 15 2 16 1HQJ 2 16 1HQJ H 1 1 15 2 16 1HQJ 2 16 1HQJ I 1 1 15 2 16 1HQJ 2 16 1HQJ J 1 1 15 2 16 1HQJ 2 16 1HQJ K 1 1 15 2 16 1HQJ 2 16 1HQJ L 1 1 15 BINDING SITE FOR RESIDUE SO4 B 1001 B SO4 1001 Software 3 BINDING SITE FOR RESIDUE SO4 F 1002 F SO4 1002 Software 5 BINDING SITE FOR RESIDUE SO4 I 1003 I SO4 1003 Software 4 BINDING SITE FOR RESIDUE SO4 C 1004 C SO4 1004 Software 3 BINDING SITE FOR RESIDUE PB G 2001 G PB 2001 Software 2 BINDING SITE FOR RESIDUE PB D 2002 D PB 2002 Software 1 BINDING SITE FOR RESIDUE PB A 2003 A PB 2003 Software 3 BINDING SITE FOR RESIDUE PB K 2005 K PB 2005 Software 2 BINDING SITE FOR RESIDUE PB I 2006 I PB 2006 Software 3 BINDING SITE FOR RESIDUE PB E 2007 E PB 2007 Software 2 BINDING SITE FOR RESIDUE PB H 2008 H PB 2008 Software 2 BINDING SITE FOR RESIDUE PB L 2009 L PB 2009 Software 2 B ARG 14 B ARG 13 3 1_555 J ARG 9 J ARG 8 3 1_655 K ARG 7 K ARG 6 3 1_655 D ARG 7 D ARG 6 5 1_555 F ARG 9 F ARG 8 5 1_555 G ARG 14 G ARG 13 5 1_655 G HOH 2008 FA HOH 5 1_655 I LYS 16 I LYS 15 5 1_655 H ARG 9 H ARG 8 4 1_555 I ARG 7 I ARG 6 4 1_555 K LYS 16 K LYS 15 4 1_555 L ARG 14 L ARG 13 4 1_555 A ARG 7 A ARG 6 3 1_555 C ARG 9 C ARG 8 3 1_555 E ARG 14 E ARG 13 3 1_555 G HOH 2008 FA HOH 2 1_555 K LEU 4 K LEU 3 2 1_545 D LEU 4 D LEU 3 1 1_555 A GLU 10 A GLU 9 3 1_555 C HOH 1007 BA HOH 3 1_555 C HOH 1011 BA HOH 3 1_555 A HOH 2008 Z HOH 2 1_555 K LYS 16 K LYS 15 2 1_555 H HOH 2013 GA HOH 3 1_555 H HOH 2020 GA HOH 3 1_555 I GLU 10 I GLU 9 3 1_555 E GLU 10 E GLU 9 2 1_555 E HOH 2019 DA HOH 2 1_555 F GLU 10 F GLU 9 2 4_455 H GLU 3 H GLU 2 2 1_555 A GLU 5 A GLU 4 2 1_555 L GLU 3 L GLU 2 2 1_555 19 P 21 21 21