0.016918 0.000000 0.000000 0.000000 0.009745 0.000000 0.000000 0.000000 0.006980 0.00000 0.00000 0.00000 CIS PROLINE - PRO H 37 Vitali, J. Edwards, B.F.P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 59.110 102.620 143.260 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 267 17670 17678 1517214 The structure of a complex of bovine alpha-thrombin and recombinant hirudin at 2.8-A resolution. 1992 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 5735.240 THROMBIN (SMALL SUBUNIT) 3.4.21.5 1 man polymer 29772.422 THROMBIN (LARGE SUBUNIT) 3.4.21.5 1 man polymer 6973.505 HIRUDIN 1 man polymer 18.015 water 129 nat water no no TSEDHFQPFFNEKTFGAGEADCGLRPLFEKKQVQDQTEKELFESYIEGR TSEDHFQPFFNEKTFGAGEADCGLRPLFEKKQVQDQTEKELFESYIEGR L polypeptide(L) no no IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLLVRIGKHSRTRYERKVEKISM LDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNRRETWTTSVAEVQPSVL QVVNLPLVERPVCKASTRIRITDNMFCAGYKPGEGKRGDACEGDSGGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDRLGS IVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLLVRIGKHSRTRYERKVEKISM LDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNRRETWTTSVAEVQPSVL QVVNLPLVERPVCKASTRIRITDNMFCAGYKPGEGKRGDACEGDSGGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDRLGS H polypeptide(L) no no VVYTDCTESGQNLCLCEGSNVCGQGNKCILGSDGEKNQCVTGEGTPKPQSHNDGDFEEIPEEYLQ VVYTDCTESGQNLCLCEGSNVCGQGNKCILGSDGEKNQCVTGEGTPKPQSHNDGDFEEIPEEYLQ I polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n cattle Bos sample 9913 Bos taurus 32644 unidentified cattle Bos sample 9913 Bos taurus 32644 unidentified medicinal leech Hirudo sample 6421 Hirudo medicinalis 32644 unidentified 2.56 51.87 repository Initial release Version format compliance Version format compliance 1 0 1994-01-31 1 1 2008-03-24 1 2 2011-07-13 Y 1993-02-25 REL HOH water THROMBIN IS CLEAVED BETWEEN RESIDUES 15 AND 16. CHAIN INDICATOR *L* IS USED FOR RESIDUES 1H - 15 AND CHAIN INDICATOR *H* IS USED FOR RESIDUES 16 - 247. CHAIN INDICATOR *I* IS USED FOR HIRUDIN. THE COMPLEX CONSISTS OF ONE MOLECULE OF ALPHA-THROMBIN AND ONE MOLECULE OF HIRUDIN. HOH 479 4 HOH HOH 479 L HOH 480 4 HOH HOH 480 L HOH 488 4 HOH HOH 488 L HOH 495 4 HOH HOH 495 L HOH 497 4 HOH HOH 497 L HOH 502 4 HOH HOH 502 L HOH 522 4 HOH HOH 522 L HOH 524 4 HOH HOH 524 L HOH 525 4 HOH HOH 525 L HOH 526 4 HOH HOH 526 L HOH 529 4 HOH HOH 529 L HOH 531 4 HOH HOH 531 L HOH 534 4 HOH HOH 534 L HOH 535 4 HOH HOH 535 L HOH 536 4 HOH HOH 536 L HOH 537 4 HOH HOH 537 L HOH 553 4 HOH HOH 553 L HOH 560 4 HOH HOH 560 L HOH 564 4 HOH HOH 564 L HOH 568 4 HOH HOH 568 L HOH 583 4 HOH HOH 583 L HOH 591 4 HOH HOH 591 L HOH 592 4 HOH HOH 592 L HOH 593 4 HOH HOH 593 L HOH 594 4 HOH HOH 594 L HOH 467 4 HOH HOH 467 H HOH 468 4 HOH HOH 468 H HOH 469 4 HOH HOH 469 H HOH 470 4 HOH HOH 470 H HOH 471 4 HOH HOH 471 H HOH 472 4 HOH HOH 472 H HOH 473 4 HOH HOH 473 H HOH 474 4 HOH HOH 474 H HOH 475 4 HOH HOH 475 H HOH 476 4 HOH HOH 476 H HOH 481 4 HOH HOH 481 H HOH 482 4 HOH HOH 482 H HOH 483 4 HOH HOH 483 H HOH 484 4 HOH HOH 484 H HOH 487 4 HOH HOH 487 H HOH 490 4 HOH HOH 490 H HOH 491 4 HOH HOH 491 H HOH 494 4 HOH HOH 494 H HOH 496 4 HOH HOH 496 H HOH 499 4 HOH HOH 499 H HOH 501 4 HOH HOH 501 H HOH 503 4 HOH HOH 503 H HOH 504 4 HOH HOH 504 H HOH 506 4 HOH HOH 506 H HOH 507 4 HOH HOH 507 H HOH 508 4 HOH HOH 508 H HOH 509 4 HOH HOH 509 H HOH 510 4 HOH HOH 510 H HOH 511 4 HOH HOH 511 H HOH 512 4 HOH HOH 512 H HOH 513 4 HOH HOH 513 H HOH 514 4 HOH HOH 514 H HOH 515 4 HOH HOH 515 H HOH 517 4 HOH HOH 517 H HOH 519 4 HOH HOH 519 H HOH 520 4 HOH HOH 520 H HOH 521 4 HOH HOH 521 H HOH 523 4 HOH HOH 523 H HOH 527 4 HOH HOH 527 H HOH 528 4 HOH HOH 528 H HOH 530 4 HOH HOH 530 H HOH 532 4 HOH HOH 532 H HOH 533 4 HOH HOH 533 H HOH 538 4 HOH HOH 538 H HOH 539 4 HOH HOH 539 H HOH 540 4 HOH HOH 540 H HOH 541 4 HOH HOH 541 H HOH 542 4 HOH HOH 542 H HOH 546 4 HOH HOH 546 H HOH 547 4 HOH HOH 547 H HOH 548 4 HOH HOH 548 H HOH 549 4 HOH HOH 549 H HOH 550 4 HOH HOH 550 H HOH 555 4 HOH HOH 555 H HOH 556 4 HOH HOH 556 H HOH 558 4 HOH HOH 558 H HOH 559 4 HOH HOH 559 H HOH 562 4 HOH HOH 562 H HOH 563 4 HOH HOH 563 H HOH 565 4 HOH HOH 565 H HOH 567 4 HOH HOH 567 H HOH 569 4 HOH HOH 569 H HOH 572 4 HOH HOH 572 H HOH 573 4 HOH HOH 573 H HOH 575 4 HOH HOH 575 H HOH 576 4 HOH HOH 576 H HOH 577 4 HOH HOH 577 H HOH 578 4 HOH HOH 578 H HOH 579 4 HOH HOH 579 H HOH 580 4 HOH HOH 580 H HOH 581 4 HOH HOH 581 H HOH 582 4 HOH HOH 582 H HOH 584 4 HOH HOH 584 H HOH 585 4 HOH HOH 585 H HOH 586 4 HOH HOH 586 H HOH 587 4 HOH HOH 587 H HOH 588 4 HOH HOH 588 H HOH 589 4 HOH HOH 589 H HOH 590 4 HOH HOH 590 H HOH 466 4 HOH HOH 466 I HOH 477 4 HOH HOH 477 I HOH 478 4 HOH HOH 478 I HOH 485 4 HOH HOH 485 I HOH 486 4 HOH HOH 486 I HOH 489 4 HOH HOH 489 I HOH 492 4 HOH HOH 492 I HOH 493 4 HOH HOH 493 I HOH 498 4 HOH HOH 498 I HOH 500 4 HOH HOH 500 I HOH 505 4 HOH HOH 505 I HOH 516 4 HOH HOH 516 I HOH 518 4 HOH HOH 518 I HOH 543 4 HOH HOH 543 I HOH 544 4 HOH HOH 544 I HOH 545 4 HOH HOH 545 I HOH 551 4 HOH HOH 551 I HOH 552 4 HOH HOH 552 I HOH 554 4 HOH HOH 554 I HOH 557 4 HOH HOH 557 I HOH 561 4 HOH HOH 561 I HOH 566 4 HOH HOH 566 I HOH 570 4 HOH HOH 570 I HOH 571 4 HOH HOH 571 I HOH 574 4 HOH HOH 574 I n 1 -12 L n 2 -11 L n 3 -10 L n 4 -9 L n 5 -8 L n 6 -7 L n 7 -6 L n 8 -5 L n 9 -4 L n 10 -3 L n 11 -2 L n 12 -1 L n 13 0 L THR 1 n 14 H THR 1 L PHE 1 n 15 G PHE 1 L GLY 1 n 16 F GLY 1 L ALA 1 n 17 E ALA 1 L GLY 1 n 18 D GLY 1 L GLU 1 n 19 C GLU 1 L ALA 1 n 20 B ALA 1 L ASP 1 n 21 A ASP 1 L CYS 1 n 22 CYS 1 L GLY 2 n 23 GLY 2 L LEU 3 n 24 LEU 3 L ARG 4 n 25 ARG 4 L PRO 5 n 26 PRO 5 L LEU 6 n 27 LEU 6 L PHE 7 n 28 PHE 7 L GLU 8 n 29 GLU 8 L LYS 9 n 30 LYS 9 L LYS 10 n 31 LYS 10 L GLN 11 n 32 GLN 11 L VAL 12 n 33 VAL 12 L GLN 13 n 34 GLN 13 L ASP 14 n 35 ASP 14 L GLN 14 n 36 A GLN 14 L THR 14 n 37 B THR 14 L GLU 14 n 38 C GLU 14 L LYS 14 n 39 D LYS 14 L GLU 14 n 40 E GLU 14 L LEU 14 n 41 F LEU 14 L PHE 14 n 42 G PHE 14 L GLU 14 n 43 H GLU 14 L SER 14 n 44 I SER 14 L TYR 14 n 45 J TYR 14 L ILE 14 n 46 K ILE 14 L GLU 14 n 47 L GLU 14 L GLY 14 n 48 M GLY 14 L ARG 15 n 49 ARG 15 L ILE 16 n 1 ILE 16 H VAL 17 n 2 VAL 17 H GLU 18 n 3 GLU 18 H GLY 19 n 4 GLY 19 H GLN 20 n 5 GLN 20 H ASP 21 n 6 ASP 21 H ALA 22 n 7 ALA 22 H GLU 23 n 8 GLU 23 H VAL 24 n 9 VAL 24 H GLY 25 n 10 GLY 25 H LEU 26 n 11 LEU 26 H SER 27 n 12 SER 27 H PRO 28 n 13 PRO 28 H TRP 29 n 14 TRP 29 H GLN 30 n 15 GLN 30 H VAL 31 n 16 VAL 31 H MET 32 n 17 MET 32 H LEU 33 n 18 LEU 33 H PHE 34 n 19 PHE 34 H ARG 35 n 20 ARG 35 H LYS 36 n 21 LYS 36 H SER 36 n 22 A SER 36 H PRO 37 n 23 PRO 37 H GLN 38 n 24 GLN 38 H GLU 39 n 25 GLU 39 H LEU 40 n 26 LEU 40 H LEU 41 n 27 LEU 41 H CYS 42 n 28 CYS 42 H GLY 43 n 29 GLY 43 H ALA 44 n 30 ALA 44 H SER 45 n 31 SER 45 H LEU 46 n 32 LEU 46 H ILE 47 n 33 ILE 47 H SER 48 n 34 SER 48 H ASP 49 n 35 ASP 49 H ARG 50 n 36 ARG 50 H TRP 51 n 37 TRP 51 H VAL 52 n 38 VAL 52 H LEU 53 n 39 LEU 53 H THR 54 n 40 THR 54 H ALA 55 n 41 ALA 55 H ALA 56 n 42 ALA 56 H HIS 57 n 43 HIS 57 H CYS 58 n 44 CYS 58 H LEU 59 n 45 LEU 59 H LEU 60 n 46 LEU 60 H TYR 60 n 47 A TYR 60 H PRO 60 n 48 B PRO 60 H PRO 60 n 49 C PRO 60 H TRP 60 n 50 D TRP 60 H ASP 60 n 51 E ASP 60 H LYS 60 n 52 F LYS 60 H ASN 60 n 53 G ASN 60 H PHE 60 n 54 H PHE 60 H THR 60 n 55 I THR 60 H VAL 61 n 56 VAL 61 H ASP 62 n 57 ASP 62 H ASP 63 n 58 ASP 63 H LEU 64 n 59 LEU 64 H LEU 65 n 60 LEU 65 H VAL 66 n 61 VAL 66 H ARG 67 n 62 ARG 67 H ILE 68 n 63 ILE 68 H GLY 69 n 64 GLY 69 H LYS 70 n 65 LYS 70 H HIS 71 n 66 HIS 71 H SER 72 n 67 SER 72 H ARG 73 n 68 ARG 73 H THR 74 n 69 THR 74 H ARG 75 n 70 ARG 75 H TYR 76 n 71 TYR 76 H GLU 77 n 72 GLU 77 H ARG 77 n 73 A ARG 77 H LYS 78 n 74 LYS 78 H VAL 79 n 75 VAL 79 H GLU 80 n 76 GLU 80 H LYS 81 n 77 LYS 81 H ILE 82 n 78 ILE 82 H SER 83 n 79 SER 83 H MET 84 n 80 MET 84 H LEU 85 n 81 LEU 85 H ASP 86 n 82 ASP 86 H LYS 87 n 83 LYS 87 H ILE 88 n 84 ILE 88 H TYR 89 n 85 TYR 89 H ILE 90 n 86 ILE 90 H HIS 91 n 87 HIS 91 H PRO 92 n 88 PRO 92 H ARG 93 n 89 ARG 93 H TYR 94 n 90 TYR 94 H ASN 95 n 91 ASN 95 H TRP 96 n 92 TRP 96 H LYS 97 n 93 LYS 97 H GLU 97 n 94 A GLU 97 H ASN 98 n 95 ASN 98 H LEU 99 n 96 LEU 99 H ASP 100 n 97 ASP 100 H ARG 101 n 98 ARG 101 H ASP 102 n 99 ASP 102 H ILE 103 n 100 ILE 103 H ALA 104 n 101 ALA 104 H LEU 105 n 102 LEU 105 H LEU 106 n 103 LEU 106 H LYS 107 n 104 LYS 107 H LEU 108 n 105 LEU 108 H LYS 109 n 106 LYS 109 H ARG 110 n 107 ARG 110 H PRO 111 n 108 PRO 111 H ILE 112 n 109 ILE 112 H GLU 113 n 110 GLU 113 H LEU 114 n 111 LEU 114 H SER 115 n 112 SER 115 H ASP 116 n 113 ASP 116 H TYR 117 n 114 TYR 117 H ILE 118 n 115 ILE 118 H HIS 119 n 116 HIS 119 H PRO 120 n 117 PRO 120 H VAL 121 n 118 VAL 121 H CYS 122 n 119 CYS 122 H LEU 123 n 120 LEU 123 H PRO 124 n 121 PRO 124 H ASP 125 n 122 ASP 125 H LYS 126 n 123 LYS 126 H GLN 127 n 124 GLN 127 H THR 128 n 125 THR 128 H ALA 129 n 126 ALA 129 H ALA 129 n 127 A ALA 129 H LYS 129 n 128 B LYS 129 H LEU 129 n 129 C LEU 129 H LEU 130 n 130 LEU 130 H HIS 131 n 131 HIS 131 H ALA 132 n 132 ALA 132 H GLY 133 n 133 GLY 133 H PHE 134 n 134 PHE 134 H LYS 135 n 135 LYS 135 H GLY 136 n 136 GLY 136 H ARG 137 n 137 ARG 137 H VAL 138 n 138 VAL 138 H THR 139 n 139 THR 139 H GLY 140 n 140 GLY 140 H TRP 141 n 141 TRP 141 H GLY 142 n 142 GLY 142 H ASN 143 n 143 ASN 143 H ARG 144 n 144 ARG 144 H ARG 145 n 145 ARG 145 H GLU 146 n 146 GLU 146 H THR 147 n 147 THR 147 H TRP 148 n 148 TRP 148 H THR 149 n 149 THR 149 H THR 149 n 150 A THR 149 H SER 149 n 151 B SER 149 H VAL 149 n 152 C VAL 149 H ALA 149 n 153 D ALA 149 H GLU 149 n 154 E GLU 149 H VAL 150 n 155 VAL 150 H GLN 151 n 156 GLN 151 H PRO 152 n 157 PRO 152 H SER 153 n 158 SER 153 H VAL 154 n 159 VAL 154 H LEU 155 n 160 LEU 155 H GLN 156 n 161 GLN 156 H VAL 157 n 162 VAL 157 H VAL 158 n 163 VAL 158 H ASN 159 n 164 ASN 159 H LEU 160 n 165 LEU 160 H PRO 161 n 166 PRO 161 H LEU 162 n 167 LEU 162 H VAL 163 n 168 VAL 163 H GLU 164 n 169 GLU 164 H ARG 165 n 170 ARG 165 H PRO 166 n 171 PRO 166 H VAL 167 n 172 VAL 167 H CYS 168 n 173 CYS 168 H LYS 169 n 174 LYS 169 H ALA 170 n 175 ALA 170 H SER 171 n 176 SER 171 H THR 172 n 177 THR 172 H ARG 173 n 178 ARG 173 H ILE 174 n 179 ILE 174 H ARG 175 n 180 ARG 175 H ILE 176 n 181 ILE 176 H THR 177 n 182 THR 177 H ASP 178 n 183 ASP 178 H ASN 179 n 184 ASN 179 H MET 180 n 185 MET 180 H PHE 181 n 186 PHE 181 H CYS 182 n 187 CYS 182 H ALA 183 n 188 ALA 183 H GLY 184 n 189 GLY 184 H TYR 184 n 190 A TYR 184 H LYS 185 n 191 LYS 185 H PRO 186 n 192 PRO 186 H GLY 186 n 193 A GLY 186 H GLU 186 n 194 B GLU 186 H GLY 186 n 195 C GLY 186 H LYS 186 n 196 D LYS 186 H ARG 187 n 197 ARG 187 H GLY 188 n 198 GLY 188 H ASP 189 n 199 ASP 189 H ALA 190 n 200 ALA 190 H CYS 191 n 201 CYS 191 H GLU 192 n 202 GLU 192 H GLY 193 n 203 GLY 193 H ASP 194 n 204 ASP 194 H SER 195 n 205 SER 195 H GLY 196 n 206 GLY 196 H GLY 197 n 207 GLY 197 H PRO 198 n 208 PRO 198 H PHE 199 n 209 PHE 199 H VAL 200 n 210 VAL 200 H MET 201 n 211 MET 201 H LYS 202 n 212 LYS 202 H SER 203 n 213 SER 203 H PRO 204 n 214 PRO 204 H TYR 204 n 215 A TYR 204 H ASN 204 n 216 B ASN 204 H ASN 205 n 217 ASN 205 H ARG 206 n 218 ARG 206 H TRP 207 n 219 TRP 207 H TYR 208 n 220 TYR 208 H GLN 209 n 221 GLN 209 H MET 210 n 222 MET 210 H GLY 211 n 223 GLY 211 H ILE 212 n 224 ILE 212 H VAL 213 n 225 VAL 213 H SER 214 n 226 SER 214 H TRP 215 n 227 TRP 215 H GLY 216 n 228 GLY 216 H GLU 217 n 229 GLU 217 H GLY 219 n 230 GLY 219 H CYS 220 n 231 CYS 220 H ASP 221 n 232 ASP 221 H ARG 221 n 233 A ARG 221 H ASP 222 n 234 ASP 222 H GLY 223 n 235 GLY 223 H LYS 224 n 236 LYS 224 H TYR 225 n 237 TYR 225 H GLY 226 n 238 GLY 226 H PHE 227 n 239 PHE 227 H TYR 228 n 240 TYR 228 H THR 229 n 241 THR 229 H HIS 230 n 242 HIS 230 H VAL 231 n 243 VAL 231 H PHE 232 n 244 PHE 232 H ARG 233 n 245 ARG 233 H LEU 234 n 246 LEU 234 H LYS 235 n 247 LYS 235 H LYS 236 n 248 LYS 236 H TRP 237 n 249 TRP 237 H ILE 238 n 250 ILE 238 H GLN 239 n 251 GLN 239 H LYS 240 n 252 LYS 240 H VAL 241 n 253 VAL 241 H ILE 242 n 254 ILE 242 H ASP 243 n 255 ASP 243 H ARG 244 n 256 ARG 244 H LEU 245 n 257 LEU 245 H GLY 246 n 258 GLY 246 H SER 247 n 259 SER 247 H VAL 1 n 1 VAL 1 I VAL 2 n 2 VAL 2 I TYR 3 n 3 TYR 3 I THR 4 n 4 THR 4 I ASP 5 n 5 ASP 5 I CYS 6 n 6 CYS 6 I THR 7 n 7 THR 7 I GLU 8 n 8 GLU 8 I SER 9 n 9 SER 9 I GLY 10 n 10 GLY 10 I GLN 11 n 11 GLN 11 I ASN 12 n 12 ASN 12 I LEU 13 n 13 LEU 13 I CYS 14 n 14 CYS 14 I LEU 15 n 15 LEU 15 I CYS 16 n 16 CYS 16 I GLU 17 n 17 GLU 17 I GLY 18 n 18 GLY 18 I SER 19 n 19 SER 19 I ASN 20 n 20 ASN 20 I VAL 21 n 21 VAL 21 I CYS 22 n 22 CYS 22 I GLY 23 n 23 GLY 23 I GLN 24 n 24 GLN 24 I GLY 25 n 25 GLY 25 I ASN 26 n 26 ASN 26 I LYS 27 n 27 LYS 27 I CYS 28 n 28 CYS 28 I ILE 29 n 29 ILE 29 I LEU 30 n 30 LEU 30 I GLY 31 n 31 GLY 31 I SER 32 n 32 SER 32 I ASP 33 n 33 ASP 33 I GLY 34 n 34 GLY 34 I GLU 35 n 35 GLU 35 I LYS 36 n 36 LYS 36 I ASN 37 n 37 ASN 37 I GLN 38 n 38 GLN 38 I CYS 39 n 39 CYS 39 I VAL 40 n 40 VAL 40 I THR 41 n 41 THR 41 I GLY 42 n 42 GLY 42 I GLU 43 n 43 GLU 43 I GLY 44 n 44 GLY 44 I THR 45 n 45 THR 45 I PRO 46 n 46 PRO 46 I LYS 47 n 47 LYS 47 I PRO 48 n 48 PRO 48 I GLN 49 n 49 GLN 49 I SER 50 n 50 SER 50 I HIS 51 n 51 HIS 51 I ASN 52 n 52 ASN 52 I ASP 53 n 53 ASP 53 I GLY 54 n 54 GLY 54 I ASP 55 n 55 ASP 55 I PHE 56 n 56 PHE 56 I GLU 57 n 57 GLU 57 I GLU 58 n 58 GLU 58 I ILE 59 n 59 ILE 59 I PRO 60 n 60 PRO 60 I GLU 61 n 61 GLU 61 I GLU 62 n 62 GLU 62 I TYR 63 n 63 TYR 63 I LEU 64 n 64 LEU 64 I GLN 65 n 65 GLN 65 I author_and_software_defined_assembly PISA 3 trimeric 6420 -25 15330 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 H N ARG 35 B N ARG 20 H O GLU 39 B O GLU 25 H N SER 45 B N SER 31 H O LEU 53 B O LEU 39 H N THR 54 B N THR 40 H O ALA 104 B O ALA 101 H O LYS 107 B O LYS 104 H N ASP 86 B N ASP 82 H N LEU 85 B N LEU 81 H O LEU 64 B O LEU 59 H O ARG 67 B O ARG 62 H N MET 32 B N MET 17 H N ALA 183 B N ALA 188 H O GLY 226 B O GLY 238 H N THR 229 B N THR 241 H O ILE 212 B O ILE 224 H N GLY 211 B N GLY 223 H O PHE 199 B O PHE 209 H O VAL 200 B O VAL 210 H N ARG 137 B N ARG 137 H O GLY 140 B O GLY 140 H N GLN 156 B N GLN 161 H N ALA 183 B N ALA 188 H O GLY 226 B O GLY 238 H N THR 229 B N THR 241 H O ILE 212 B O ILE 224 H O GLY 216 B O GLY 228 I N TYR 3 C N TYR 3 I O CYS 14 C O CYS 14 I N CYS 22 C N CYS 22 I N ILE 29 C N ILE 29 I O GLN 38 C O GLN 38 1 L THR -12 A THR 1 1 Y 1 L SER -11 A SER 2 1 Y 1 L GLU -10 A GLU 3 1 Y 1 L ASP -9 A ASP 4 1 Y 1 L HIS -8 A HIS 5 1 Y 1 L PHE -7 A PHE 6 1 Y 1 L GLN -6 A GLN 7 1 Y 1 L PRO -5 A PRO 8 1 Y 1 L PHE -4 A PHE 9 1 Y 1 L PHE -3 A PHE 10 1 Y 1 L ASN -2 A ASN 11 1 Y 1 L GLU -1 A GLU 12 1 Y 1 L LYS 0 A LYS 13 1 Y C 1 H H O O VAL HOH 149 581 2.01 1 H H NH1 O ARG HOH 50 558 2.05 B 1 H H O O SER HOH 149 523 2.05 1 H H OE2 O GLU HOH 192 508 2.09 1 H H NH1 O ARG HOH 173 490 2.11 1 H H O O PRO HOH 204 586 2.13 1 H H OD1 O ASP HOH 62 541 2.14 A 1 H H O O ALA HOH 129 572 2.14 1 L L O N GLU GLN 8 11 2.15 E 1 L L OE1 O GLU HOH 14 529 2.16 1 H H OD2 OG ASP SER 102 214 2.18 1 I I O O HOH HOH 486 489 2.19 1 H H N OD2 ILE ASP 16 194 2.19 1 L ARG 4 0.133 SIDE CHAIN M M M 1 19.92 2.50 113.10 133.02 L L L N CA C GLY GLY GLY 14 14 14 N 1 8.59 0.90 118.30 126.89 H H H CB CG OD1 ASP ASP ASP 21 21 21 N 1 14.15 2.30 115.30 129.45 H H H CA CB CG LEU LEU LEU 33 33 33 N 1 16.06 2.60 112.10 128.16 H H H N CA C PRO PRO PRO 37 37 37 N 1 17.67 2.30 115.30 132.97 H H H CA CB CG LEU LEU LEU 40 40 40 N 1 8.45 1.10 114.20 122.65 H H H CA CB SG CYS CYS CYS 42 42 42 N 1 8.94 1.40 110.10 119.04 H H H N CA CB ALA ALA ALA 55 55 55 N 1 7.06 0.90 118.30 125.36 H H H CB CG OD1 ASP ASP ASP 62 62 62 N 1 4.58 0.50 120.30 124.88 H H H NE CZ NH2 ARG ARG ARG 67 67 67 N 1 -3.26 0.50 120.30 117.04 H H H NE CZ NH1 ARG ARG ARG 73 73 73 N A A A 1 3.93 0.50 120.30 124.23 H H H NE CZ NH1 ARG ARG ARG 77 77 77 N 1 3.20 0.50 120.30 123.50 H H H NE CZ NH2 ARG ARG ARG 93 93 93 N A A A 1 15.00 2.20 113.40 128.40 H H H CA CB CG GLU GLU GLU 97 97 97 N 1 8.97 1.40 123.60 132.57 H H H CD NE CZ ARG ARG ARG 101 101 101 N 1 25.66 1.40 123.60 149.26 H H H CD NE CZ ARG ARG ARG 110 110 110 N 1 5.19 0.50 120.30 125.49 H H H NE CZ NH1 ARG ARG ARG 110 110 110 N 1 29.83 2.20 113.40 143.23 H H H CA CB CG GLU GLU GLU 113 113 113 N 1 16.59 1.90 110.20 126.79 H H H CB CA C LEU LEU LEU 123 123 123 N B B B 1 15.19 2.20 113.40 128.59 H H H CA CB CG LYS LYS LYS 129 129 129 N B B B 1 17.44 2.60 111.60 129.04 H H H CB CG CD LYS LYS LYS 129 129 129 N 1 24.21 2.30 115.30 139.51 H H H CA CB CG LEU LEU LEU 130 130 130 N 1 17.29 1.40 123.60 140.89 H H H CD NE CZ ARG ARG ARG 137 137 137 N 1 25.36 1.40 123.60 148.96 H H H CD NE CZ ARG ARG ARG 144 144 144 N 1 5.19 0.50 120.30 125.49 H H H NE CZ NH2 ARG ARG ARG 144 144 144 N 1 3.88 0.50 120.30 124.18 H H H NE CZ NH2 ARG ARG ARG 145 145 145 N 1 18.66 2.20 113.40 132.06 H H H CA CB CG GLU GLU GLU 146 146 146 N B B B 1 19.32 2.70 111.00 130.32 H H H N CA C SER SER SER 149 149 149 N B B B 1 13.35 2.10 120.10 133.45 H H H CA C O SER SER SER 149 149 149 N D D D 1 8.83 1.40 110.10 118.93 H H H N CA CB ALA ALA ALA 149 149 149 N D D D 1 -18.96 2.70 111.00 92.04 H H H N CA C ALA ALA ALA 149 149 149 N 1 11.46 1.90 110.20 121.66 H H H CB CA C LEU LEU LEU 162 162 162 N 1 3.01 0.50 120.30 123.31 H H H NE CZ NH2 ARG ARG ARG 173 173 173 N 1 8.77 1.20 111.50 120.27 H H H CB CA C CYS CYS CYS 182 182 182 N 1 14.04 1.10 114.20 128.24 H H H CA CB SG CYS CYS CYS 182 182 182 N 1 13.69 2.00 110.40 124.09 H H H CB CA C LYS LYS LYS 185 185 185 N 1 -11.15 1.80 110.60 99.45 H H H N CA CB ARG ARG ARG 187 187 187 N 1 16.72 1.40 123.60 140.32 H H H CD NE CZ ARG ARG ARG 187 187 187 N 1 7.09 0.50 120.30 127.39 H H H NE CZ NH1 ARG ARG ARG 187 187 187 N 1 5.56 0.90 118.30 123.86 H H H CB CG OD2 ASP ASP ASP 189 189 189 N 1 8.96 1.10 114.20 123.16 H H H CA CB SG CYS CYS CYS 191 191 191 N 1 -6.38 0.90 118.30 111.92 H H H CB CG OD1 ASP ASP ASP 194 194 194 N 1 6.87 0.90 118.30 125.17 H H H CB CG OD2 ASP ASP ASP 194 194 194 N 1 13.54 1.80 110.60 124.14 H H H N CA CB PHE PHE PHE 199 199 199 N B B B 1 15.98 2.00 110.40 126.38 H H H CB CA C ASN ASN ASN 204 204 204 N B B B 1 -13.59 2.10 120.10 106.51 H H H CA C O ASN ASN ASN 204 204 204 N B B 1 14.76 2.20 117.20 131.96 H H H CA C N ASN ASN ASN 204 204 205 Y 1 -3.50 0.50 120.30 116.80 H H H NE CZ NH2 ARG ARG ARG 206 206 206 N 1 18.16 2.20 113.40 131.56 H H H CA CB CG GLU GLU GLU 217 217 217 N 1 3.14 0.50 120.30 123.44 H H H NE CZ NH2 ARG ARG ARG 233 233 233 N 1 17.31 2.50 121.70 139.01 H H H C N CA ARG LEU LEU 244 245 245 Y 1 17.30 1.90 113.40 130.70 I I I CA CB CG TYR TYR TYR 3 3 3 N 1 7.32 1.20 111.50 118.82 I I I CB CA C CYS CYS CYS 22 22 22 N 1 8.09 1.10 114.20 122.29 I I I CA CB SG CYS CYS CYS 22 22 22 N 1 -7.37 0.90 118.30 110.93 I I I CB CG OD1 ASP ASP ASP 33 33 33 N 1 26.02 2.50 121.70 147.72 I I I C N CA GLU TYR TYR 62 63 63 Y E 1 L ALA 1 66.67 -22.37 1 L PHE 7 -73.44 -90.67 1 L GLU 8 -50.72 -78.99 1 L LYS 9 -22.03 -46.37 1 L GLN 11 92.50 -6.72 1 H LYS 36 -56.60 1.35 A 1 H SER 36 136.84 104.40 1 H PRO 37 -40.00 124.58 1 H GLN 38 -57.65 101.09 1 H GLU 39 -174.64 148.61 1 H CYS 42 -174.83 -175.12 1 H SER 48 -78.78 -125.01 1 H ASP 49 -150.44 -2.52 1 H ALA 56 -25.66 -75.82 1 H HIS 57 -36.49 -22.11 1 H HIS 71 -123.37 -61.14 1 H GLU 77 -110.73 56.65 A 1 H ARG 77 -11.61 -55.11 1 H PRO 92 -33.90 -23.98 1 H LYS 97 -84.77 38.72 A 1 H GLU 97 -170.82 -116.74 1 H ARG 101 40.98 71.84 1 H LYS 109 -72.56 44.52 1 H ARG 110 151.00 157.55 1 H PRO 124 -47.84 161.37 1 H LYS 126 -40.98 -15.91 1 H ALA 129 -163.98 -49.04 1 H ARG 145 -162.18 -168.70 A 1 H THR 149 68.26 85.22 D 1 H ALA 149 80.42 62.08 E 1 H GLU 149 -47.23 99.69 1 H VAL 150 -38.80 -11.26 1 H ARG 165 -10.73 -63.18 1 H ASN 179 -64.27 34.74 1 H MET 180 -174.81 135.07 1 H SER 195 -35.01 128.99 1 H VAL 213 -67.54 98.95 1 H SER 214 -90.51 -77.42 1 H GLU 217 -111.47 63.23 1 H LYS 235 -37.53 -36.13 1 H LYS 240 -55.13 4.56 1 H ASP 243 -57.06 -82.79 1 H ARG 244 12.53 82.21 1 H LEU 245 167.55 -18.64 1 I ASN 12 -71.60 -80.64 1 I CYS 16 -91.06 -68.48 1 I SER 19 -96.81 44.53 1 I SER 32 -78.83 -157.06 1 I GLN 49 146.21 160.22 1 I SER 50 119.51 77.80 1 I HIS 51 -125.80 -160.35 1 I ASN 52 85.35 107.44 1 I ASP 53 100.12 156.17 1 I PRO 60 -41.55 98.96 1 I GLU 61 -1.08 -75.60 1 I TYR 63 -162.95 -66.49 SUBSEQUENT TO PUBLICATION, ADDITIONAL REFINEMENT WAS CARRIED OUT WITH PROFFT USING DAMPING FACTORS OF 0.7 FOR BOTH POSITIONAL AND THERMAL PARAMETERS. THE USE OF THIS DAMPING FACTOR COMPARED TO THE FULL SHIFTS APPLIED EARLIER REDUCED THE R VALUE FROM 0.161 REPORTED IN THE PAPER TO 0.155. THIS ENTRY CONTAINS THE REVISED COORDINATES. THESE COORDINATES GIVE THE SAME DISTANCES (WITHIN 0.2 ANGSTROMS) AS THOSE DISCUSSED IN THE PAPER. 0.155 2.8 7.0 6958 1 0.0 2.8 7.0 129 2996 0 0 2867 0.019 0.041 0.040 0.148 0.22 0.33 0.35 2.7 24.0 29.9 refinement PROFFT ALPHA-THROMBIN (E.C.3.4.21.5) COMPLEX WITH HIRUDIN VARIANT 1 THE STRUCTURE OF A COMPLEX OF BOVINE ALPHA-THROMBIN AND RECOMBINANT HIRUDIN AT 2.8 ANGSTROMS RESOLUTION 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N L THR 14 A THR 37 HELX_P L TYR 14 A TYR 45 1 1 9 B J H ALA 55 B ALA 41 HELX_P H CYS 58 B CYS 44 5 2 4 H PRO 60 B PRO 48 HELX_P H ASP 60 B ASP 51 5 3 4 B E H THR 60 B THR 55 HELX_P H ASP 62 B ASP 57 5 4 3 I H GLU 164 B GLU 169 HELX_P H ALA 170 B ALA 175 1 5 7 H LEU 234 B LEU 246 HELX_P H ASP 243 B ASP 255 1 6 10 disulf 2.010 L CYS 1 A SG CYS 22 1_555 H CYS 122 B SG CYS 119 1_555 disulf 2.040 H CYS 42 B SG CYS 28 1_555 H CYS 58 B SG CYS 44 1_555 disulf 2.108 H CYS 168 B SG CYS 173 1_555 H CYS 182 B SG CYS 187 1_555 disulf 2.028 H CYS 191 B SG CYS 201 1_555 H CYS 220 B SG CYS 231 1_555 disulf 2.060 I CYS 6 C SG CYS 6 1_555 I CYS 14 C SG CYS 14 1_555 disulf 2.011 I CYS 16 C SG CYS 16 1_555 I CYS 28 C SG CYS 28 1_555 disulf 2.013 I CYS 22 C SG CYS 22 1_555 I CYS 39 C SG CYS 39 1_555 HYDROLASE/HYDROLASE INHIBITOR SERINE PROTEINASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX H SER 36 B SER 22 A 1 H PRO 37 B PRO 23 1.60 THRB_BOVIN UNP 1 318 P00735 THRB_BOVIN UNP 2 367 P00735 ITH1_HIRME UNP 3 1 P01050 318 366 1HRT -12 15 P00735 L 1 1 49 367 625 1HRT 16 247 P00735 H 2 1 259 1 65 1HRT 1 65 P01050 I 3 1 65 7 6 4 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel H GLN 30 B GLN 15 H ARG 35 B ARG 20 H GLU 39 B GLU 25 H SER 45 B SER 31 H TRP 51 B TRP 37 H THR 54 B THR 40 H ALA 104 B ALA 101 H LEU 108 B LEU 105 H LYS 81 B LYS 77 H ILE 90 B ILE 86 H LEU 64 B LEU 59 H ILE 68 B ILE 63 H GLN 30 B GLN 15 H ARG 35 B ARG 20 H MET 180 B MET 185 H ALA 183 B ALA 188 H GLY 226 B GLY 238 H HIS 230 B HIS 242 H TRP 207 B TRP 219 H GLU 217 B GLU 229 H PRO 198 B PRO 208 H LYS 202 B LYS 212 H GLY 136 B GLY 136 H GLY 140 B GLY 140 H GLN 156 B GLN 161 H LEU 160 B LEU 165 H MET 180 B MET 185 H ALA 183 B ALA 188 H GLY 226 B GLY 238 H HIS 230 B HIS 242 H TRP 207 B TRP 219 H GLU 217 B GLU 229 I VAL 2 C VAL 2 I TYR 3 C TYR 3 I CYS 14 C CYS 14 I LEU 15 C LEU 15 I VAL 21 C VAL 21 I CYS 22 C CYS 22 I ASN 26 C ASN 26 I ILE 29 C ILE 29 I GLN 38 C GLN 38 I THR 41 C THR 41 20 C 2 2 21