1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Read, C.M. Cary, P.D. Crane-Robinson, C. Driscoll, P.C. Carillo, M.O.M. Norman, D.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C2 H6 O S 78.133 BETA-MERCAPTOETHANOL non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 The Structure of the Hmg Box and its Interaction with DNA UK Nucleic Acids Res. NARHAD 0389 0305-1048 21 3427 Solution Structure of a DNA-Binding Domain from Hmg1 1993 10.2210/pdb1hsm/pdb pdb_00001hsm 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 8843.149 HIGH MOBILITY GROUP PROTEIN 1 1 man polymer 78.133 BETA-MERCAPTOETHANOL 1 syn non-polymer no no NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Chinese hamster Cricetulus Escherichia sample INSERT DERIVED BY PCR 10029 Cricetulus griseus 562 Escherichia coli DH5 ALPHA PGEX-2T PGEX-2T GENE: INSERT DERIVED BY PCR database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list struct_conn struct_site repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1995-02-07 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_conn.pdbx_leaving_atom_flag _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1994-11-17 REL BME BETA-MERCAPTOETHANOL 1 NILGES refinement SIMULATED ANNEALING BRUNGER refinement X-PLOR 3.0 BME 16 2 BME BME 82 A ASN 3 n 1 ASN 3 A ALA 4 n 2 ALA 4 A PRO 5 n 3 PRO 5 A LYS 6 n 4 LYS 6 A ARG 7 n 5 ARG 7 A PRO 8 n 6 PRO 8 A PRO 9 n 7 PRO 9 A SER 10 n 8 SER 10 A ALA 11 n 9 ALA 11 A PHE 12 n 10 PHE 12 A PHE 13 n 11 PHE 13 A LEU 14 n 12 LEU 14 A PHE 15 n 13 PHE 15 A CYS 16 n 14 CYS 16 A SER 17 n 15 SER 17 A GLU 18 n 16 GLU 18 A TYR 19 n 17 TYR 19 A ARG 20 n 18 ARG 20 A PRO 21 n 19 PRO 21 A LYS 22 n 20 LYS 22 A ILE 23 n 21 ILE 23 A LYS 24 n 22 LYS 24 A GLY 25 n 23 GLY 25 A GLU 26 n 24 GLU 26 A HIS 27 n 25 HIS 27 A PRO 28 n 26 PRO 28 A GLY 29 n 27 GLY 29 A LEU 30 n 28 LEU 30 A SER 31 n 29 SER 31 A ILE 32 n 30 ILE 32 A GLY 33 n 31 GLY 33 A ASP 34 n 32 ASP 34 A VAL 35 n 33 VAL 35 A ALA 36 n 34 ALA 36 A LYS 37 n 35 LYS 37 A LYS 38 n 36 LYS 38 A LEU 39 n 37 LEU 39 A GLY 40 n 38 GLY 40 A GLU 41 n 39 GLU 41 A MET 42 n 40 MET 42 A TRP 43 n 41 TRP 43 A ASN 44 n 42 ASN 44 A ASN 45 n 43 ASN 45 A THR 46 n 44 THR 46 A ALA 47 n 45 ALA 47 A ALA 48 n 46 ALA 48 A ASP 49 n 47 ASP 49 A ASP 50 n 48 ASP 50 A LYS 51 n 49 LYS 51 A GLN 52 n 50 GLN 52 A PRO 53 n 51 PRO 53 A TYR 54 n 52 TYR 54 A GLU 55 n 53 GLU 55 A LYS 56 n 54 LYS 56 A LYS 57 n 55 LYS 57 A ALA 58 n 56 ALA 58 A ALA 59 n 57 ALA 59 A LYS 60 n 58 LYS 60 A LEU 61 n 59 LEU 61 A LYS 62 n 60 LYS 62 A GLU 63 n 61 GLU 63 A LYS 64 n 62 LYS 64 A TYR 65 n 63 TYR 65 A GLU 66 n 64 GLU 66 A LYS 67 n 65 LYS 67 A ASP 68 n 66 ASP 68 A ILE 69 n 67 ILE 69 A ALA 70 n 68 ALA 70 A ALA 71 n 69 ALA 71 A TYR 72 n 70 TYR 72 A ARG 73 n 71 ARG 73 A ALA 74 n 72 ALA 74 A LYS 75 n 73 LYS 75 A GLY 76 n 74 GLY 76 A LYS 77 n 75 LYS 77 A PRO 78 n 76 PRO 78 A ASP 79 n 77 ASP 79 A ALA 80 n 78 ALA 80 A ALA 81 n 79 ALA 81 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ARG 7 0.305 SIDE CHAIN 1 A ARG 20 0.316 SIDE CHAIN 1 A ARG 73 0.158 SIDE CHAIN 1 -3.83 0.60 121.00 117.17 A A A CB CG CD2 TYR TYR TYR 19 19 19 N 1 -7.59 1.00 110.10 102.51 A A A CG CD1 NE1 TRP TRP TRP 43 43 43 N 1 8.49 0.90 109.00 117.49 A A A CD1 NE1 CE2 TRP TRP TRP 43 43 43 N 1 8.32 1.10 130.40 138.72 A A A NE1 CE2 CZ2 TRP TRP TRP 43 43 43 N 1 -6.13 1.00 107.30 101.17 A A A NE1 CE2 CD2 TRP TRP TRP 43 43 43 N 1 A ALA 4 116.46 90.05 1 A PRO 9 -27.06 169.13 1 A ALA 11 133.48 -51.97 1 A ARG 20 -20.12 -64.58 1 A PRO 28 -77.91 37.43 1 A ALA 47 129.84 -52.65 1 A ALA 48 109.67 -42.06 1 A GLN 52 -26.10 -57.98 1 A LYS 75 149.10 68.85 1 A LYS 77 -22.44 156.19 1 A ALA 80 -131.74 -54.28 model building X-PLOR 3.0 refinement X-PLOR 3.0 phasing X-PLOR 3.0 THE STRUCTURE OF THE HMG BOX AND ITS INTERACTION WITH DNA 1 Y N 2 N N A PHE 12 A PHE 10 HELX_P A GLU 18 A GLU 16 1 H1 7 A PRO 21 A PRO 19 HELX_P H1 AND H1' BEND AROUND H2 A GLU 26 A GLU 24 1 H1' 6 A GLY 33 A GLY 31 HELX_P A ASN 44 A ASN 42 1 H2 12 A PRO 53 A PRO 51 HELX_P A ARG 73 A ARG 71 1 H3 21 covale 2.019 none A CYS 16 A SG CYS 14 1_555 A BME 82 B S2 BME 1_555 DNA-BINDING DNA-BINDING HMG1_CRIGR UNP 1 1 P07156 GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPP KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAA YRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 92 170 1HSM 3 81 P07156 A 1 1 79 BINDING SITE FOR RESIDUE BME A 82 A BME 82 Software 4 A CYS 16 A CYS 14 4 1_555 A SER 17 A SER 15 4 1_555 A ILE 32 A ILE 30 4 1_555 A ALA 36 A ALA 34 4 1_555 1 P 1