0.020806
0.000000
0.000000
0.000000
0.008288
0.000000
0.000000
0.000000
0.020393
0.00000
0.00000
0.00000
Evdokimov, A.G.
Waugh, D.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
48.063
120.651
49.036
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
O
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
R
C
N
292
N
O
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
N
315
N
O
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
Y
300
N
doub
Y
301
N
sing
Y
302
N
sing
N
303
N
sing
Y
304
N
doub
N
305
N
sing
Y
306
N
doub
N
307
N
sing
Y
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
57
793
799
10.1107/S0907444901004875
11375498
Structure of the N-terminal domain of Yersinia pestis YopH at 2.0 A resolution.
2001
10.2210/pdb1huf/pdb
pdb_00001huf
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Osmic mirrors
IMAGE PLATE
2000-11-05
MARRESEARCH
graphite
SINGLE WAVELENGTH
M
x-ray
1
1.54178
1.0
1.54178
ROTATING ANODE
RIGAKU
15080.780
TYROSINE PHOSPHATASE YOPH
3.1.3.48
N-TERMINAL DOMAIN
1
man
polymer
18.015
water
94
nat
water
VIRULENCE PROTEIN
EC 3.1.3.48 HYDROLASE
no
no
GGGGGMNLSLSDLHRQVSRLVQQESGDCTGKLRGNVAANKETTFQGLTIASGARESEKVFAQTVLSHVANVVLTQEDTAK
LLQSTVKHNLNNYDLRSVGNGNSVLVSLRSDQMTLQDAKVLLEAALRQESGARGHHHHHH
GGGGGMNLSLSDLHRQVSRLVQQESGDCTGKLRGNVAANKETTFQGLTIASGARESEKVFAQTVLSHVANVVLTQEDTAK
LLQSTVKHNLNNYDLRSVGNGNSVLVSLRSDQMTLQDAKVLLEAALRQESGARGHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Yersinia
Escherichia
sample
YOPH
632
Yersinia pestis
562
Escherichia coli
BL21(DE3)-RIL
PDONR201
PKM904
1
2.46
49.71
VAPOR DIFFUSION, HANGING DROP
9
PEG4000, bicine, pH 9, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
2001-05-23
1
1
2008-04-27
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
C-Terminal Domain of YopH
RCSB
Y
RCSB
2001-01-04
REL
REL
HOH
water
HOH
2001
2
HOH
HOH
2001
A
HOH
2002
2
HOH
HOH
2002
A
HOH
2003
2
HOH
HOH
2003
A
HOH
2004
2
HOH
HOH
2004
A
HOH
2005
2
HOH
HOH
2005
A
HOH
2006
2
HOH
HOH
2006
A
HOH
2007
2
HOH
HOH
2007
A
HOH
2008
2
HOH
HOH
2008
A
HOH
2009
2
HOH
HOH
2009
A
HOH
2010
2
HOH
HOH
2010
A
HOH
2011
2
HOH
HOH
2011
A
HOH
2012
2
HOH
HOH
2012
A
HOH
2013
2
HOH
HOH
2013
A
HOH
2014
2
HOH
HOH
2014
A
HOH
2015
2
HOH
HOH
2015
A
HOH
2016
2
HOH
HOH
2016
A
HOH
2017
2
HOH
HOH
2017
A
HOH
2018
2
HOH
HOH
2018
A
HOH
2019
2
HOH
HOH
2019
A
HOH
2020
2
HOH
HOH
2020
A
HOH
2021
2
HOH
HOH
2021
A
HOH
2022
2
HOH
HOH
2022
A
HOH
2023
2
HOH
HOH
2023
A
HOH
2024
2
HOH
HOH
2024
A
HOH
2025
2
HOH
HOH
2025
A
HOH
2026
2
HOH
HOH
2026
A
HOH
2027
2
HOH
HOH
2027
A
HOH
2028
2
HOH
HOH
2028
A
HOH
2029
2
HOH
HOH
2029
A
HOH
2030
2
HOH
HOH
2030
A
HOH
2031
2
HOH
HOH
2031
A
HOH
2032
2
HOH
HOH
2032
A
HOH
2033
2
HOH
HOH
2033
A
HOH
2034
2
HOH
HOH
2034
A
HOH
2035
2
HOH
HOH
2035
A
HOH
2036
2
HOH
HOH
2036
A
HOH
2037
2
HOH
HOH
2037
A
HOH
2038
2
HOH
HOH
2038
A
HOH
2039
2
HOH
HOH
2039
A
HOH
2040
2
HOH
HOH
2040
A
HOH
2041
2
HOH
HOH
2041
A
HOH
2042
2
HOH
HOH
2042
A
HOH
2043
2
HOH
HOH
2043
A
HOH
2044
2
HOH
HOH
2044
A
HOH
2045
2
HOH
HOH
2045
A
HOH
2046
2
HOH
HOH
2046
A
HOH
2047
2
HOH
HOH
2047
A
HOH
2048
2
HOH
HOH
2048
A
HOH
2049
2
HOH
HOH
2049
A
HOH
2050
2
HOH
HOH
2050
A
HOH
2051
2
HOH
HOH
2051
A
HOH
2052
2
HOH
HOH
2052
A
HOH
2053
2
HOH
HOH
2053
A
HOH
2054
2
HOH
HOH
2054
A
HOH
2055
2
HOH
HOH
2055
A
HOH
2056
2
HOH
HOH
2056
A
HOH
2057
2
HOH
HOH
2057
A
HOH
2058
2
HOH
HOH
2058
A
HOH
2059
2
HOH
HOH
2059
A
HOH
2060
2
HOH
HOH
2060
A
HOH
2061
2
HOH
HOH
2061
A
HOH
2062
2
HOH
HOH
2062
A
HOH
2063
2
HOH
HOH
2063
A
HOH
2064
2
HOH
HOH
2064
A
HOH
2065
2
HOH
HOH
2065
A
HOH
2066
2
HOH
HOH
2066
A
HOH
2067
2
HOH
HOH
2067
A
HOH
2068
2
HOH
HOH
2068
A
HOH
2069
2
HOH
HOH
2069
A
HOH
2070
2
HOH
HOH
2070
A
HOH
2071
2
HOH
HOH
2071
A
HOH
2072
2
HOH
HOH
2072
A
HOH
2073
2
HOH
HOH
2073
A
HOH
2074
2
HOH
HOH
2074
A
HOH
2075
2
HOH
HOH
2075
A
HOH
2076
2
HOH
HOH
2076
A
HOH
2077
2
HOH
HOH
2077
A
HOH
2078
2
HOH
HOH
2078
A
HOH
2079
2
HOH
HOH
2079
A
HOH
2080
2
HOH
HOH
2080
A
HOH
2081
2
HOH
HOH
2081
A
HOH
2082
2
HOH
HOH
2082
A
HOH
2083
2
HOH
HOH
2083
A
HOH
2084
2
HOH
HOH
2084
A
HOH
2085
2
HOH
HOH
2085
A
HOH
2086
2
HOH
HOH
2086
A
HOH
2087
2
HOH
HOH
2087
A
HOH
2088
2
HOH
HOH
2088
A
HOH
2089
2
HOH
HOH
2089
A
HOH
2090
2
HOH
HOH
2090
A
HOH
2091
2
HOH
HOH
2091
A
HOH
2092
2
HOH
HOH
2092
A
HOH
2093
2
HOH
HOH
2093
A
HOH
2094
2
HOH
HOH
2094
A
n
1
-4
A
n
2
-3
A
n
3
-2
A
n
4
-1
A
n
5
0
A
n
6
1
A
n
7
2
A
LEU
3
n
8
LEU
3
A
SER
4
n
9
SER
4
A
LEU
5
n
10
LEU
5
A
SER
6
n
11
SER
6
A
ASP
7
n
12
ASP
7
A
LEU
8
n
13
LEU
8
A
HIS
9
n
14
HIS
9
A
ARG
10
n
15
ARG
10
A
GLN
11
n
16
GLN
11
A
VAL
12
n
17
VAL
12
A
SER
13
n
18
SER
13
A
ARG
14
n
19
ARG
14
A
LEU
15
n
20
LEU
15
A
VAL
16
n
21
VAL
16
A
GLN
17
n
22
GLN
17
A
GLN
18
n
23
GLN
18
A
GLU
19
n
24
GLU
19
A
SER
20
n
25
SER
20
A
GLY
21
n
26
GLY
21
A
ASP
22
n
27
ASP
22
A
CYS
23
n
28
CYS
23
A
THR
24
n
29
THR
24
A
GLY
25
n
30
GLY
25
A
LYS
26
n
31
LYS
26
A
LEU
27
n
32
LEU
27
A
ARG
28
n
33
ARG
28
A
GLY
29
n
34
GLY
29
A
ASN
30
n
35
ASN
30
A
VAL
31
n
36
VAL
31
A
ALA
32
n
37
ALA
32
A
ALA
33
n
38
ALA
33
A
ASN
34
n
39
ASN
34
A
LYS
35
n
40
LYS
35
A
GLU
36
n
41
GLU
36
A
THR
37
n
42
THR
37
A
THR
38
n
43
THR
38
A
PHE
39
n
44
PHE
39
A
GLN
40
n
45
GLN
40
A
GLY
41
n
46
GLY
41
A
LEU
42
n
47
LEU
42
A
THR
43
n
48
THR
43
A
ILE
44
n
49
ILE
44
A
ALA
45
n
50
ALA
45
A
SER
46
n
51
SER
46
A
GLY
47
n
52
GLY
47
A
ALA
48
n
53
ALA
48
A
ARG
49
n
54
ARG
49
A
GLU
50
n
55
GLU
50
A
SER
51
n
56
SER
51
A
GLU
52
n
57
GLU
52
A
LYS
53
n
58
LYS
53
A
VAL
54
n
59
VAL
54
A
PHE
55
n
60
PHE
55
A
ALA
56
n
61
ALA
56
A
GLN
57
n
62
GLN
57
A
THR
58
n
63
THR
58
A
VAL
59
n
64
VAL
59
A
LEU
60
n
65
LEU
60
A
SER
61
n
66
SER
61
A
HIS
62
n
67
HIS
62
A
VAL
63
n
68
VAL
63
A
ALA
64
n
69
ALA
64
A
ASN
65
n
70
ASN
65
A
VAL
66
n
71
VAL
66
A
VAL
67
n
72
VAL
67
A
LEU
68
n
73
LEU
68
A
THR
69
n
74
THR
69
A
GLN
70
n
75
GLN
70
A
GLU
71
n
76
GLU
71
A
ASP
72
n
77
ASP
72
A
THR
73
n
78
THR
73
A
ALA
74
n
79
ALA
74
A
LYS
75
n
80
LYS
75
A
LEU
76
n
81
LEU
76
A
LEU
77
n
82
LEU
77
A
GLN
78
n
83
GLN
78
A
SER
79
n
84
SER
79
A
THR
80
n
85
THR
80
A
VAL
81
n
86
VAL
81
A
LYS
82
n
87
LYS
82
A
HIS
83
n
88
HIS
83
A
ASN
84
n
89
ASN
84
A
LEU
85
n
90
LEU
85
A
ASN
86
n
91
ASN
86
A
ASN
87
n
92
ASN
87
A
TYR
88
n
93
TYR
88
A
ASP
89
n
94
ASP
89
A
LEU
90
n
95
LEU
90
A
ARG
91
n
96
ARG
91
A
SER
92
n
97
SER
92
A
VAL
93
n
98
VAL
93
A
GLY
94
n
99
GLY
94
A
ASN
95
n
100
ASN
95
A
GLY
96
n
101
GLY
96
A
ASN
97
n
102
ASN
97
A
SER
98
n
103
SER
98
A
VAL
99
n
104
VAL
99
A
LEU
100
n
105
LEU
100
A
VAL
101
n
106
VAL
101
A
SER
102
n
107
SER
102
A
LEU
103
n
108
LEU
103
A
ARG
104
n
109
ARG
104
A
SER
105
n
110
SER
105
A
ASP
106
n
111
ASP
106
A
GLN
107
n
112
GLN
107
A
MET
108
n
113
MET
108
A
THR
109
n
114
THR
109
A
LEU
110
n
115
LEU
110
A
GLN
111
n
116
GLN
111
A
ASP
112
n
117
ASP
112
A
ALA
113
n
118
ALA
113
A
LYS
114
n
119
LYS
114
A
VAL
115
n
120
VAL
115
A
LEU
116
n
121
LEU
116
A
LEU
117
n
122
LEU
117
A
GLU
118
n
123
GLU
118
A
ALA
119
n
124
ALA
119
A
ALA
120
n
125
ALA
120
A
LEU
121
n
126
LEU
121
A
ARG
122
n
127
ARG
122
A
GLN
123
n
128
GLN
123
A
GLU
124
n
129
GLU
124
A
SER
125
n
130
SER
125
A
n
131
126
A
n
132
127
A
n
133
128
A
n
134
129
A
n
135
130
A
n
136
131
A
n
137
132
A
n
138
133
A
n
139
134
A
n
140
135
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
26
A
N
LYS
31
A
O
ALA
32
A
O
ALA
37
A
N
VAL
93
A
N
VAL
98
A
O
ASN
97
A
O
ASN
102
1
A
HOH
2018
B
HOH
1
A
HOH
2034
B
HOH
1
A
HOH
2086
B
HOH
1
A
GLY
-4
A
GLY
1
1
Y
1
A
GLY
-3
A
GLY
2
1
Y
1
A
GLY
-2
A
GLY
3
1
Y
1
A
GLY
-1
A
GLY
4
1
Y
1
A
GLY
0
A
GLY
5
1
Y
1
A
MET
1
A
MET
6
1
Y
1
A
ASN
2
A
ASN
7
1
Y
1
A
GLY
126
A
GLY
131
1
Y
1
A
ALA
127
A
ALA
132
1
Y
1
A
ARG
128
A
ARG
133
1
Y
1
A
GLY
129
A
GLY
134
1
Y
1
A
HIS
130
A
HIS
135
1
Y
1
A
HIS
131
A
HIS
136
1
Y
1
A
HIS
132
A
HIS
137
1
Y
1
A
HIS
133
A
HIS
138
1
Y
1
A
HIS
134
A
HIS
139
1
Y
1
A
HIS
135
A
HIS
140
1
Y
1
3.86
0.50
120.30
124.16
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
28
28
28
N
1
4.37
0.50
120.30
124.67
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
122
122
122
N
1
-3.47
0.50
120.30
116.83
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
122
122
122
N
1
A
GLU
19
72.88
35.08
1
A
ARG
28
-157.75
8.41
31
One simulated annealing run (CNS) followed by conjugate-gradient least squares procedure. Data cutoff of 2 sigma is 8046 reflections.
0.2600000
0.1892000
0.2187000
0.1921000
2.0
100
773
9659
8860
8.0
97.4
random
1
isotropic one B factor per atom
THROUGHOUT
2
2
MIR
Engh & Huber
Babinet (SHELXL)
250.00
0.83
2.0
100
94
1030
0
0
936
0.007
0.026
0.02
0.041
0.008
21.2
2.0
100
1HUF
9659
8860
2
2
0.0720000
0.0450000
1
15.3
4.01
83.3
0.3400000
2.01
2.08
3.6
711
3.6
75.3
phasing
SOLVE
refinement
CNS
refinement
SHELXL-97
data reduction
DENZO
data scaling
SCALEPACK
phasing
CNS
CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF THE TYROSINE PHOSPHATASE YOPH FROM YERSINIA PESTIS.
1
N
N
2
N
N
A
SER
4
A
SER
9
HELX_P
A
GLN
18
A
GLN
23
1
1
15
A
THR
43
A
THR
48
HELX_P
A
GLY
47
A
GLY
52
5
2
5
A
ARG
49
A
ARG
54
HELX_P
A
VAL
63
A
VAL
68
1
3
15
A
THR
69
A
THR
74
HELX_P
A
ASN
84
A
ASN
89
1
4
16
A
THR
109
A
THR
114
HELX_P
A
SER
125
A
SER
130
1
5
17
HYDROLASE
helical bundle, beta hairpin, HYDROLASE
O68720_YERPE
UNP
1
1
O68720
MNLSLSDLHRQVSRLVQQESGDCTGKLRGNVAANKETTFQGLTIASGARESEKVFAQTVLSHVANVVLTQEDTAKLLQST
VKHNLNNYDLRSVGNGNSVLVSLRSDQMTLQDAKVLLEAALRQESGARGH
1
130
1HUF
1
130
O68720
A
1
6
135
1
cloning artifact
GLY
-4
1HUF
A
O68720
UNP
1
1
cloning artifact
GLY
-3
1HUF
A
O68720
UNP
2
1
cloning artifact
GLY
-2
1HUF
A
O68720
UNP
3
1
cloning artifact
GLY
-1
1HUF
A
O68720
UNP
4
1
cloning artifact
GLY
0
1HUF
A
O68720
UNP
5
1
expression tag
HIS
131
1HUF
A
O68720
UNP
136
1
expression tag
HIS
132
1HUF
A
O68720
UNP
137
1
expression tag
HIS
133
1HUF
A
O68720
UNP
138
1
expression tag
HIS
134
1HUF
A
O68720
UNP
139
1
expression tag
HIS
135
1HUF
A
O68720
UNP
140
2
2
anti-parallel
anti-parallel
A
GLY
25
A
GLY
30
A
LEU
27
A
LEU
32
A
VAL
31
A
VAL
36
A
ALA
33
A
ALA
38
A
TYR
88
A
TYR
93
A
GLY
94
A
GLY
99
A
ASN
97
A
ASN
102
A
LEU
103
A
LEU
108
20
C 2 2 21