0.010041
0.000000
0.000000
0.000000
0.010041
0.000000
0.000000
0.000000
0.011444
0.00000
0.00000
0.00000
Mathews, F.S.
Sukumar, N.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
99.590
99.590
87.380
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C17 H21 N4 O9 P
456.344
FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C6 H13 N O4 S
195.237
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
non-polymer
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
N
C
N
90
N
O
N
91
N
N
N
92
N
C
N
93
N
O
N
94
N
C
N
95
N
N
Y
96
N
C
Y
97
N
C
Y
98
N
C
N
99
N
C
Y
100
N
C
N
101
N
C
Y
102
N
C
Y
103
N
C
N
104
N
N
N
105
N
C
N
106
N
C
N
107
S
C
N
108
N
O
N
109
S
C
N
110
N
O
N
111
R
C
N
112
N
O
N
113
N
C
N
114
N
O
N
115
N
P
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
N
N
141
S
C
N
142
N
C
N
143
N
O
N
144
N
C
N
145
N
C
N
146
N
C
N
147
N
O
N
148
N
N
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
O
N
168
N
O
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
N
C
N
181
N
C
N
182
N
O
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
N
N
190
S
C
N
191
N
C
N
192
N
O
N
193
N
C
Y
194
N
C
Y
195
N
N
Y
196
N
C
Y
197
N
C
Y
198
N
N
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
S
C
N
218
N
C
N
219
N
C
N
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
N
N
236
S
C
N
237
N
C
N
238
N
O
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
O
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
N
N
258
S
C
N
259
N
C
N
260
N
O
N
261
N
C
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
N
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
O
N
283
N
C
N
284
N
C
N
285
N
N
N
286
N
C
N
287
N
C
N
288
N
C
N
289
N
C
N
290
N
S
N
291
N
O
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
N
312
N
C
N
313
N
S
N
314
N
C
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
Y
337
N
C
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
N
C
N
355
N
C
N
356
N
C
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
N
372
N
O
N
373
N
O
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
S
N
382
N
O
N
383
N
O
N
384
N
O
N
385
N
O
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
R
C
N
391
N
O
N
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
N
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
N
417
N
O
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
Y
440
N
C
N
441
N
O
N
442
N
O
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
N
N
455
S
C
N
456
N
C
N
457
N
O
N
458
N
C
N
459
N
C
N
460
N
C
N
461
N
O
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
doub
N
92
N
sing
N
93
N
sing
Y
94
N
doub
Y
95
N
sing
Y
96
N
sing
N
97
N
sing
N
98
N
sing
Y
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
Y
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
Y
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
doub
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
Y
194
N
sing
Y
195
N
doub
Y
196
N
doub
N
197
N
sing
Y
198
N
sing
N
199
N
sing
Y
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
doub
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
doub
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
Y
327
N
doub
Y
328
N
sing
Y
329
N
sing
N
330
N
sing
Y
331
N
doub
N
332
N
sing
Y
333
N
doub
N
334
N
sing
Y
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
doub
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
doub
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
Y
400
N
doub
Y
401
N
sing
Y
402
N
sing
N
403
N
sing
Y
404
N
doub
Y
405
N
sing
Y
406
N
sing
N
407
N
sing
Y
408
N
sing
Y
409
N
doub
N
410
N
sing
Y
411
N
doub
N
412
N
sing
Y
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
doub
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
Y
428
N
doub
Y
429
N
sing
Y
430
N
sing
N
431
N
sing
Y
432
N
doub
N
433
N
sing
Y
434
N
doub
N
435
N
sing
Y
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
doub
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
40
9870
9878
10.1021/bi010938k
11502180
Structure of an active soluble mutant of the membrane-associated (S)-mandelate dehydrogenase.
2001
10.2210/pdb1huv/pdb
pdb_00001huv
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
IMAGE PLATE
RIGAKU RAXIS IV
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
20 RESIDUE INSERTION FROM GLYCOLATE OXIDASE AT RESIDUE 177
42132.273
L(+)-MANDELATE DEHYDROGENASE
1
man
polymer
96.063
SULFATE ION
1
syn
non-polymer
456.344
FLAVIN MONONUCLEOTIDE
1
syn
non-polymer
195.237
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
1
syn
non-polymer
18.015
water
291
nat
water
S-MANDELATE DEHYDROGENASE, MDH
no
no
MSQNLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPT
GLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIHREIAQGMVLKALHTGYTTLVLTTDVA
VNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDAD
RCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGET
GVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEGVTNTAPVDHLIGKGTHAHHHHHH
MSQNLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPT
GLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIHREIAQGMVLKALHTGYTTLVLTTDVA
VNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDAD
RCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGET
GVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEGVTNTAPVDHLIGKGTHAHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Pseudomonas
Escherichia
sample
1
176
303
Pseudomonas putida
562
Escherichia coli
Pseudomonas
Escherichia
sample
197
374
303
Pseudomonas putida
562
Escherichia coli
Spinach
Escherichia
sample
177
196
3562
Spinacia oleracea
562
Escherichia coli
1
2.57
52.15
VAPOR DIFFUSION, HANGING DROP
6.2
MES, ammonium sulfate, ethylene glycerol, FMN, NaCl, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 291K
291
entity_src_gen
pdbx_unobs_or_zero_occ_atoms
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_unobs_or_zero_occ_atoms
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Advisory
Source and taxonomy
Refinement description
Advisory
Data collection
Database references
Derived calculations
Refinement description
1
0
2001-09-19
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-07-26
1
4
2017-10-04
1
5
2023-08-09
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Sequence
chimeric mutant of (s)-mandelate dehydrogenase with
residues 177-215 replaced by residues 176-195 of
glycolate oxidase.
The authors believe SwissProt entry P20932 incorrectly
lists residue 15 as ARG instead of ALA. Sequencing of
MDH, as well as the original clone pSCR4, has been done
a number of times including site-specific mutants and
repeatedly confirmed that it is ALA 15 rather than ARG 15.
RCSB
Y
RCSB
2001-01-04
REL
REL
SO4
SULFATE ION
FMN
FLAVIN MONONUCLEOTIDE
MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
HOH
water
1GOX
PDB ENTRY 1GOX
PDB
experimental model
SO4
400
2
SO4
SO4
400
A
FMN
390
3
FMN
FMN
390
A
MES
890
4
MES
MES
890
A
HOH
1
5
HOH
HOH
891
A
HOH
2
5
HOH
HOH
892
A
HOH
3
5
HOH
HOH
893
A
HOH
4
5
HOH
HOH
894
A
HOH
5
5
HOH
HOH
895
A
HOH
6
5
HOH
HOH
896
A
HOH
7
5
HOH
HOH
897
A
HOH
8
5
HOH
HOH
898
A
HOH
9
5
HOH
HOH
899
A
HOH
10
5
HOH
HOH
900
A
HOH
11
5
HOH
HOH
901
A
HOH
12
5
HOH
HOH
902
A
HOH
13
5
HOH
HOH
903
A
HOH
14
5
HOH
HOH
904
A
HOH
15
5
HOH
HOH
905
A
HOH
16
5
HOH
HOH
906
A
HOH
17
5
HOH
HOH
907
A
HOH
18
5
HOH
HOH
908
A
HOH
19
5
HOH
HOH
909
A
HOH
20
5
HOH
HOH
910
A
HOH
21
5
HOH
HOH
911
A
HOH
22
5
HOH
HOH
912
A
HOH
23
5
HOH
HOH
913
A
HOH
24
5
HOH
HOH
914
A
HOH
25
5
HOH
HOH
915
A
HOH
26
5
HOH
HOH
916
A
HOH
27
5
HOH
HOH
917
A
HOH
28
5
HOH
HOH
918
A
HOH
29
5
HOH
HOH
919
A
HOH
30
5
HOH
HOH
920
A
HOH
31
5
HOH
HOH
921
A
HOH
32
5
HOH
HOH
922
A
HOH
33
5
HOH
HOH
923
A
HOH
34
5
HOH
HOH
924
A
HOH
35
5
HOH
HOH
925
A
HOH
36
5
HOH
HOH
926
A
HOH
37
5
HOH
HOH
927
A
HOH
38
5
HOH
HOH
928
A
HOH
39
5
HOH
HOH
929
A
HOH
40
5
HOH
HOH
930
A
HOH
41
5
HOH
HOH
931
A
HOH
42
5
HOH
HOH
932
A
HOH
43
5
HOH
HOH
933
A
HOH
44
5
HOH
HOH
934
A
HOH
45
5
HOH
HOH
935
A
HOH
46
5
HOH
HOH
936
A
HOH
47
5
HOH
HOH
937
A
HOH
48
5
HOH
HOH
938
A
HOH
49
5
HOH
HOH
939
A
HOH
50
5
HOH
HOH
940
A
HOH
51
5
HOH
HOH
941
A
HOH
52
5
HOH
HOH
942
A
HOH
53
5
HOH
HOH
943
A
HOH
54
5
HOH
HOH
944
A
HOH
55
5
HOH
HOH
945
A
HOH
56
5
HOH
HOH
946
A
HOH
57
5
HOH
HOH
947
A
HOH
58
5
HOH
HOH
948
A
HOH
59
5
HOH
HOH
949
A
HOH
60
5
HOH
HOH
950
A
HOH
61
5
HOH
HOH
951
A
HOH
62
5
HOH
HOH
952
A
HOH
63
5
HOH
HOH
953
A
HOH
64
5
HOH
HOH
954
A
HOH
65
5
HOH
HOH
955
A
HOH
66
5
HOH
HOH
956
A
HOH
67
5
HOH
HOH
957
A
HOH
68
5
HOH
HOH
958
A
HOH
69
5
HOH
HOH
959
A
HOH
70
5
HOH
HOH
960
A
HOH
71
5
HOH
HOH
961
A
HOH
72
5
HOH
HOH
962
A
HOH
73
5
HOH
HOH
963
A
HOH
74
5
HOH
HOH
964
A
HOH
75
5
HOH
HOH
965
A
HOH
76
5
HOH
HOH
966
A
HOH
77
5
HOH
HOH
967
A
HOH
78
5
HOH
HOH
968
A
HOH
79
5
HOH
HOH
969
A
HOH
80
5
HOH
HOH
970
A
HOH
81
5
HOH
HOH
971
A
HOH
82
5
HOH
HOH
972
A
HOH
83
5
HOH
HOH
973
A
HOH
84
5
HOH
HOH
974
A
HOH
85
5
HOH
HOH
975
A
HOH
86
5
HOH
HOH
976
A
HOH
87
5
HOH
HOH
977
A
HOH
88
5
HOH
HOH
978
A
HOH
89
5
HOH
HOH
979
A
HOH
90
5
HOH
HOH
980
A
HOH
91
5
HOH
HOH
981
A
HOH
92
5
HOH
HOH
982
A
HOH
93
5
HOH
HOH
983
A
HOH
94
5
HOH
HOH
984
A
HOH
95
5
HOH
HOH
985
A
HOH
96
5
HOH
HOH
986
A
HOH
97
5
HOH
HOH
987
A
HOH
98
5
HOH
HOH
988
A
HOH
99
5
HOH
HOH
989
A
HOH
100
5
HOH
HOH
990
A
HOH
101
5
HOH
HOH
991
A
HOH
102
5
HOH
HOH
992
A
HOH
103
5
HOH
HOH
993
A
HOH
104
5
HOH
HOH
994
A
HOH
105
5
HOH
HOH
995
A
HOH
106
5
HOH
HOH
996
A
HOH
107
5
HOH
HOH
997
A
HOH
108
5
HOH
HOH
998
A
HOH
109
5
HOH
HOH
999
A
HOH
110
5
HOH
HOH
1000
A
HOH
111
5
HOH
HOH
1001
A
HOH
112
5
HOH
HOH
1002
A
HOH
113
5
HOH
HOH
1003
A
HOH
114
5
HOH
HOH
1004
A
HOH
115
5
HOH
HOH
1005
A
HOH
116
5
HOH
HOH
1006
A
HOH
117
5
HOH
HOH
1007
A
HOH
118
5
HOH
HOH
1008
A
HOH
119
5
HOH
HOH
1009
A
HOH
120
5
HOH
HOH
1010
A
HOH
121
5
HOH
HOH
1011
A
HOH
122
5
HOH
HOH
1012
A
HOH
123
5
HOH
HOH
1013
A
HOH
124
5
HOH
HOH
1014
A
HOH
125
5
HOH
HOH
1015
A
HOH
126
5
HOH
HOH
1016
A
HOH
127
5
HOH
HOH
1017
A
HOH
128
5
HOH
HOH
1018
A
HOH
129
5
HOH
HOH
1019
A
HOH
130
5
HOH
HOH
1020
A
HOH
131
5
HOH
HOH
1021
A
HOH
132
5
HOH
HOH
1022
A
HOH
133
5
HOH
HOH
1023
A
HOH
134
5
HOH
HOH
1024
A
HOH
135
5
HOH
HOH
1025
A
HOH
136
5
HOH
HOH
1026
A
HOH
137
5
HOH
HOH
1027
A
HOH
138
5
HOH
HOH
1028
A
HOH
139
5
HOH
HOH
1029
A
HOH
140
5
HOH
HOH
1030
A
HOH
141
5
HOH
HOH
1031
A
HOH
142
5
HOH
HOH
1032
A
HOH
143
5
HOH
HOH
1033
A
HOH
144
5
HOH
HOH
1034
A
HOH
145
5
HOH
HOH
1035
A
HOH
146
5
HOH
HOH
1036
A
HOH
147
5
HOH
HOH
1037
A
HOH
148
5
HOH
HOH
1038
A
HOH
149
5
HOH
HOH
1039
A
HOH
150
5
HOH
HOH
1040
A
HOH
151
5
HOH
HOH
1041
A
HOH
152
5
HOH
HOH
1042
A
HOH
153
5
HOH
HOH
1043
A
HOH
154
5
HOH
HOH
1044
A
HOH
155
5
HOH
HOH
1045
A
HOH
156
5
HOH
HOH
1046
A
HOH
157
5
HOH
HOH
1047
A
HOH
158
5
HOH
HOH
1048
A
HOH
159
5
HOH
HOH
1049
A
HOH
160
5
HOH
HOH
1050
A
HOH
161
5
HOH
HOH
1051
A
HOH
162
5
HOH
HOH
1052
A
HOH
163
5
HOH
HOH
1053
A
HOH
164
5
HOH
HOH
1054
A
HOH
165
5
HOH
HOH
1055
A
HOH
166
5
HOH
HOH
1056
A
HOH
167
5
HOH
HOH
1057
A
HOH
168
5
HOH
HOH
1058
A
HOH
169
5
HOH
HOH
1059
A
HOH
170
5
HOH
HOH
1060
A
HOH
171
5
HOH
HOH
1061
A
HOH
172
5
HOH
HOH
1062
A
HOH
173
5
HOH
HOH
1063
A
HOH
174
5
HOH
HOH
1064
A
HOH
175
5
HOH
HOH
1065
A
HOH
176
5
HOH
HOH
1066
A
HOH
177
5
HOH
HOH
1067
A
HOH
178
5
HOH
HOH
1068
A
HOH
179
5
HOH
HOH
1069
A
HOH
180
5
HOH
HOH
1070
A
HOH
181
5
HOH
HOH
1071
A
HOH
182
5
HOH
HOH
1072
A
HOH
183
5
HOH
HOH
1073
A
HOH
184
5
HOH
HOH
1074
A
HOH
185
5
HOH
HOH
1075
A
HOH
186
5
HOH
HOH
1076
A
HOH
187
5
HOH
HOH
1077
A
HOH
188
5
HOH
HOH
1078
A
HOH
189
5
HOH
HOH
1079
A
HOH
190
5
HOH
HOH
1080
A
HOH
191
5
HOH
HOH
1081
A
HOH
192
5
HOH
HOH
1082
A
HOH
193
5
HOH
HOH
1083
A
HOH
194
5
HOH
HOH
1084
A
HOH
195
5
HOH
HOH
1085
A
HOH
196
5
HOH
HOH
1086
A
HOH
197
5
HOH
HOH
1087
A
HOH
198
5
HOH
HOH
1088
A
HOH
199
5
HOH
HOH
1089
A
HOH
200
5
HOH
HOH
1090
A
HOH
201
5
HOH
HOH
1091
A
HOH
202
5
HOH
HOH
1092
A
HOH
203
5
HOH
HOH
1093
A
HOH
204
5
HOH
HOH
1094
A
HOH
205
5
HOH
HOH
1095
A
HOH
206
5
HOH
HOH
1096
A
HOH
207
5
HOH
HOH
1097
A
HOH
208
5
HOH
HOH
1098
A
HOH
209
5
HOH
HOH
1099
A
HOH
210
5
HOH
HOH
1100
A
HOH
211
5
HOH
HOH
1101
A
HOH
212
5
HOH
HOH
1102
A
HOH
213
5
HOH
HOH
1103
A
HOH
214
5
HOH
HOH
1104
A
HOH
215
5
HOH
HOH
1105
A
HOH
216
5
HOH
HOH
1106
A
HOH
217
5
HOH
HOH
1107
A
HOH
218
5
HOH
HOH
1108
A
HOH
219
5
HOH
HOH
1109
A
HOH
220
5
HOH
HOH
1110
A
HOH
221
5
HOH
HOH
1111
A
HOH
222
5
HOH
HOH
1112
A
HOH
223
5
HOH
HOH
1113
A
HOH
224
5
HOH
HOH
1114
A
HOH
225
5
HOH
HOH
1115
A
HOH
226
5
HOH
HOH
1116
A
HOH
227
5
HOH
HOH
1117
A
HOH
228
5
HOH
HOH
1118
A
HOH
229
5
HOH
HOH
1119
A
HOH
230
5
HOH
HOH
1120
A
HOH
231
5
HOH
HOH
1121
A
HOH
232
5
HOH
HOH
1122
A
HOH
233
5
HOH
HOH
1123
A
HOH
234
5
HOH
HOH
1124
A
HOH
235
5
HOH
HOH
1125
A
HOH
236
5
HOH
HOH
1126
A
HOH
237
5
HOH
HOH
1127
A
HOH
238
5
HOH
HOH
1128
A
HOH
239
5
HOH
HOH
1129
A
HOH
240
5
HOH
HOH
1130
A
HOH
241
5
HOH
HOH
1131
A
HOH
242
5
HOH
HOH
1132
A
HOH
243
5
HOH
HOH
1133
A
HOH
244
5
HOH
HOH
1134
A
HOH
245
5
HOH
HOH
1135
A
HOH
246
5
HOH
HOH
1136
A
HOH
247
5
HOH
HOH
1137
A
HOH
248
5
HOH
HOH
1138
A
HOH
249
5
HOH
HOH
1139
A
HOH
250
5
HOH
HOH
1140
A
HOH
251
5
HOH
HOH
1141
A
HOH
252
5
HOH
HOH
1142
A
HOH
253
5
HOH
HOH
1143
A
HOH
254
5
HOH
HOH
1144
A
HOH
255
5
HOH
HOH
1145
A
HOH
256
5
HOH
HOH
1146
A
HOH
257
5
HOH
HOH
1147
A
HOH
258
5
HOH
HOH
1148
A
HOH
259
5
HOH
HOH
1149
A
HOH
260
5
HOH
HOH
1150
A
HOH
261
5
HOH
HOH
1151
A
HOH
262
5
HOH
HOH
1152
A
HOH
263
5
HOH
HOH
1153
A
HOH
264
5
HOH
HOH
1154
A
HOH
265
5
HOH
HOH
1155
A
HOH
266
5
HOH
HOH
1156
A
HOH
267
5
HOH
HOH
1157
A
HOH
268
5
HOH
HOH
1158
A
HOH
269
5
HOH
HOH
1159
A
HOH
270
5
HOH
HOH
1160
A
HOH
271
5
HOH
HOH
1161
A
HOH
272
5
HOH
HOH
1162
A
HOH
273
5
HOH
HOH
1163
A
HOH
274
5
HOH
HOH
1164
A
HOH
275
5
HOH
HOH
1165
A
HOH
276
5
HOH
HOH
1166
A
HOH
277
5
HOH
HOH
1167
A
HOH
278
5
HOH
HOH
1168
A
HOH
279
5
HOH
HOH
1169
A
HOH
280
5
HOH
HOH
1170
A
HOH
281
5
HOH
HOH
1171
A
HOH
282
5
HOH
HOH
1172
A
HOH
283
5
HOH
HOH
1173
A
HOH
284
5
HOH
HOH
1174
A
HOH
285
5
HOH
HOH
1175
A
HOH
286
5
HOH
HOH
1176
A
HOH
287
5
HOH
HOH
1177
A
HOH
288
5
HOH
HOH
1178
A
HOH
289
5
HOH
HOH
1179
A
HOH
290
5
HOH
HOH
1180
A
HOH
291
5
HOH
HOH
1181
A
n
1
1
A
n
2
2
A
n
3
3
A
ASN
4
n
4
ASN
4
A
LEU
5
n
5
LEU
5
A
PHE
6
n
6
PHE
6
A
ASN
7
n
7
ASN
7
A
VAL
8
n
8
VAL
8
A
GLU
9
n
9
GLU
9
A
ASP
10
n
10
ASP
10
A
TYR
11
n
11
TYR
11
A
ARG
12
n
12
ARG
12
A
LYS
13
n
13
LYS
13
A
LEU
14
n
14
LEU
14
A
ALA
15
n
15
ALA
15
A
GLN
16
n
16
GLN
16
A
LYS
17
n
17
LYS
17
A
ARG
18
n
18
ARG
18
A
LEU
19
n
19
LEU
19
A
PRO
20
n
20
PRO
20
A
LYS
21
n
21
LYS
21
A
MET
22
n
22
MET
22
A
VAL
23
n
23
VAL
23
A
TYR
24
n
24
TYR
24
A
ASP
25
n
25
ASP
25
A
TYR
26
n
26
TYR
26
A
LEU
27
n
27
LEU
27
A
GLU
28
n
28
GLU
28
A
GLY
29
n
29
GLY
29
A
GLY
30
n
30
GLY
30
A
ALA
31
n
31
ALA
31
A
GLU
32
n
32
GLU
32
A
ASP
33
n
33
ASP
33
A
GLU
34
n
34
GLU
34
A
TYR
35
n
35
TYR
35
A
GLY
36
n
36
GLY
36
A
VAL
37
n
37
VAL
37
A
LYS
38
n
38
LYS
38
A
HIS
39
n
39
HIS
39
A
ASN
40
n
40
ASN
40
A
ARG
41
n
41
ARG
41
A
ASP
42
n
42
ASP
42
A
VAL
43
n
43
VAL
43
A
PHE
44
n
44
PHE
44
A
GLN
45
n
45
GLN
45
A
GLN
46
n
46
GLN
46
A
TRP
47
n
47
TRP
47
A
ARG
48
n
48
ARG
48
A
PHE
49
n
49
PHE
49
A
LYS
50
n
50
LYS
50
A
PRO
51
n
51
PRO
51
A
LYS
52
n
52
LYS
52
A
ARG
53
n
53
ARG
53
A
LEU
54
n
54
LEU
54
A
VAL
55
n
55
VAL
55
A
ASP
56
n
56
ASP
56
A
VAL
57
n
57
VAL
57
A
SER
58
n
58
SER
58
A
ARG
59
n
59
ARG
59
A
ARG
60
n
60
ARG
60
A
SER
61
n
61
SER
61
A
LEU
62
n
62
LEU
62
A
GLN
63
n
63
GLN
63
A
ALA
64
n
64
ALA
64
A
GLU
65
n
65
GLU
65
A
VAL
66
n
66
VAL
66
A
LEU
67
n
67
LEU
67
A
GLY
68
n
68
GLY
68
A
LYS
69
n
69
LYS
69
A
ARG
70
n
70
ARG
70
A
GLN
71
n
71
GLN
71
A
SER
72
n
72
SER
72
A
MET
73
n
73
MET
73
A
PRO
74
n
74
PRO
74
A
LEU
75
n
75
LEU
75
A
LEU
76
n
76
LEU
76
A
ILE
77
n
77
ILE
77
A
GLY
78
n
78
GLY
78
A
PRO
79
n
79
PRO
79
A
THR
80
n
80
THR
80
A
GLY
81
n
81
GLY
81
A
LEU
82
n
82
LEU
82
A
ASN
83
n
83
ASN
83
A
GLY
84
n
84
GLY
84
A
ALA
85
n
85
ALA
85
A
LEU
86
n
86
LEU
86
A
TRP
87
n
87
TRP
87
A
PRO
88
n
88
PRO
88
A
LYS
89
n
89
LYS
89
A
GLY
90
n
90
GLY
90
A
ASP
91
n
91
ASP
91
A
LEU
92
n
92
LEU
92
A
ALA
93
n
93
ALA
93
A
LEU
94
n
94
LEU
94
A
ALA
95
n
95
ALA
95
A
ARG
96
n
96
ARG
96
A
ALA
97
n
97
ALA
97
A
ALA
98
n
98
ALA
98
A
THR
99
n
99
THR
99
A
LYS
100
n
100
LYS
100
A
ALA
101
n
101
ALA
101
A
GLY
102
n
102
GLY
102
A
ILE
103
n
103
ILE
103
A
PRO
104
n
104
PRO
104
A
PHE
105
n
105
PHE
105
A
VAL
106
n
106
VAL
106
A
LEU
107
n
107
LEU
107
A
SER
108
n
108
SER
108
A
THR
109
n
109
THR
109
A
ALA
110
n
110
ALA
110
A
SER
111
n
111
SER
111
A
ASN
112
n
112
ASN
112
A
MET
113
n
113
MET
113
A
SER
114
n
114
SER
114
A
ILE
115
n
115
ILE
115
A
GLU
116
n
116
GLU
116
A
ASP
117
n
117
ASP
117
A
LEU
118
n
118
LEU
118
A
ALA
119
n
119
ALA
119
A
ARG
120
n
120
ARG
120
A
GLN
121
n
121
GLN
121
A
CYS
122
n
122
CYS
122
A
ASP
123
n
123
ASP
123
A
GLY
124
n
124
GLY
124
A
ASP
125
n
125
ASP
125
A
LEU
126
n
126
LEU
126
A
TRP
127
n
127
TRP
127
A
PHE
128
n
128
PHE
128
A
GLN
129
n
129
GLN
129
A
LEU
130
n
130
LEU
130
A
TYR
131
n
131
TYR
131
A
VAL
132
n
132
VAL
132
A
ILE
133
n
133
ILE
133
A
HIS
134
n
134
HIS
134
A
ARG
135
n
135
ARG
135
A
GLU
136
n
136
GLU
136
A
ILE
137
n
137
ILE
137
A
ALA
138
n
138
ALA
138
A
GLN
139
n
139
GLN
139
A
GLY
140
n
140
GLY
140
A
MET
141
n
141
MET
141
A
VAL
142
n
142
VAL
142
A
LEU
143
n
143
LEU
143
A
LYS
144
n
144
LYS
144
A
ALA
145
n
145
ALA
145
A
LEU
146
n
146
LEU
146
A
HIS
147
n
147
HIS
147
A
THR
148
n
148
THR
148
A
GLY
149
n
149
GLY
149
A
TYR
150
n
150
TYR
150
A
THR
151
n
151
THR
151
A
THR
152
n
152
THR
152
A
LEU
153
n
153
LEU
153
A
VAL
154
n
154
VAL
154
A
LEU
155
n
155
LEU
155
A
THR
156
n
156
THR
156
A
THR
157
n
157
THR
157
A
ASP
158
n
158
ASP
158
A
VAL
159
n
159
VAL
159
A
ALA
160
n
160
ALA
160
A
VAL
161
n
161
VAL
161
A
ASN
162
n
162
ASN
162
A
GLY
163
n
163
GLY
163
A
TYR
164
n
164
TYR
164
A
ARG
165
n
165
ARG
165
A
GLU
166
n
166
GLU
166
A
ARG
167
n
167
ARG
167
A
ASP
168
n
168
ASP
168
A
LEU
169
n
169
LEU
169
A
HIS
170
n
170
HIS
170
A
ASN
171
n
171
ASN
171
A
ARG
172
n
172
ARG
172
A
PHE
173
n
173
PHE
173
A
LYS
174
n
174
LYS
174
A
ILE
175
n
175
ILE
175
A
PRO
176
n
176
PRO
176
A
PRO
177
n
177
PRO
177
A
PHE
178
n
178
PHE
178
A
LEU
179
n
179
LEU
179
A
THR
180
n
180
THR
180
A
LEU
181
n
181
LEU
181
A
LYS
182
n
182
LYS
182
A
ASN
183
n
183
ASN
183
A
PHE
184
n
184
PHE
184
A
GLU
185
n
185
GLU
185
A
GLY
186
n
186
GLY
186
A
ILE
187
n
187
ILE
187
A
ASP
188
n
188
ASP
188
A
LEU
189
n
189
LEU
189
A
GLY
190
n
190
GLY
190
A
LYS
191
n
191
LYS
191
A
MET
192
n
192
MET
192
A
ASP
193
n
193
ASP
193
A
n
194
194
A
n
195
195
A
n
196
196
A
n
197
197
A
GLU
198
n
198
GLU
198
A
MET
199
n
199
MET
199
A
GLN
200
n
200
GLN
200
A
ALA
201
n
201
ALA
201
A
ALA
202
n
202
ALA
202
A
LEU
203
n
203
LEU
203
A
MET
204
n
204
MET
204
A
SER
205
n
205
SER
205
A
ARG
206
n
206
ARG
206
A
GLN
207
n
207
GLN
207
A
MET
208
n
208
MET
208
A
ASP
209
n
209
ASP
209
A
ALA
210
n
210
ALA
210
A
SER
211
n
211
SER
211
A
PHE
212
n
212
PHE
212
A
ASN
213
n
213
ASN
213
A
TRP
214
n
214
TRP
214
A
GLU
215
n
215
GLU
215
A
ALA
216
n
216
ALA
216
A
LEU
217
n
217
LEU
217
A
ARG
218
n
218
ARG
218
A
TRP
219
n
219
TRP
219
A
LEU
220
n
220
LEU
220
A
ARG
221
n
221
ARG
221
A
ASP
222
n
222
ASP
222
A
LEU
223
n
223
LEU
223
A
TRP
224
n
224
TRP
224
A
PRO
225
n
225
PRO
225
A
HIS
226
n
226
HIS
226
A
LYS
227
n
227
LYS
227
A
LEU
228
n
228
LEU
228
A
LEU
229
n
229
LEU
229
A
VAL
230
n
230
VAL
230
A
LYS
231
n
231
LYS
231
A
GLY
232
n
232
GLY
232
A
LEU
233
n
233
LEU
233
A
LEU
234
n
234
LEU
234
A
SER
235
n
235
SER
235
A
ALA
236
n
236
ALA
236
A
GLU
237
n
237
GLU
237
A
ASP
238
n
238
ASP
238
A
ALA
239
n
239
ALA
239
A
ASP
240
n
240
ASP
240
A
ARG
241
n
241
ARG
241
A
CYS
242
n
242
CYS
242
A
ILE
243
n
243
ILE
243
A
ALA
244
n
244
ALA
244
A
GLU
245
n
245
GLU
245
A
GLY
246
n
246
GLY
246
A
ALA
247
n
247
ALA
247
A
ASP
248
n
248
ASP
248
A
GLY
249
n
249
GLY
249
A
VAL
250
n
250
VAL
250
A
ILE
251
n
251
ILE
251
A
LEU
252
n
252
LEU
252
A
SER
253
n
253
SER
253
A
ASN
254
n
254
ASN
254
A
HIS
255
n
255
HIS
255
A
GLY
256
n
256
GLY
256
A
GLY
257
n
257
GLY
257
A
ARG
258
n
258
ARG
258
A
GLN
259
n
259
GLN
259
A
LEU
260
n
260
LEU
260
A
ASP
261
n
261
ASP
261
A
CYS
262
n
262
CYS
262
A
ALA
263
n
263
ALA
263
A
ILE
264
n
264
ILE
264
A
SER
265
n
265
SER
265
A
PRO
266
n
266
PRO
266
A
MET
267
n
267
MET
267
A
GLU
268
n
268
GLU
268
A
VAL
269
n
269
VAL
269
A
LEU
270
n
270
LEU
270
A
ALA
271
n
271
ALA
271
A
GLN
272
n
272
GLN
272
A
SER
273
n
273
SER
273
A
VAL
274
n
274
VAL
274
A
ALA
275
n
275
ALA
275
A
LYS
276
n
276
LYS
276
A
THR
277
n
277
THR
277
A
GLY
278
n
278
GLY
278
A
LYS
279
n
279
LYS
279
A
PRO
280
n
280
PRO
280
A
VAL
281
n
281
VAL
281
A
LEU
282
n
282
LEU
282
A
ILE
283
n
283
ILE
283
A
ASP
284
n
284
ASP
284
A
SER
285
n
285
SER
285
A
GLY
286
n
286
GLY
286
A
PHE
287
n
287
PHE
287
A
ARG
288
n
288
ARG
288
A
ARG
289
n
289
ARG
289
A
GLY
290
n
290
GLY
290
A
SER
291
n
291
SER
291
A
ASP
292
n
292
ASP
292
A
ILE
293
n
293
ILE
293
A
VAL
294
n
294
VAL
294
A
LYS
295
n
295
LYS
295
A
ALA
296
n
296
ALA
296
A
LEU
297
n
297
LEU
297
A
ALA
298
n
298
ALA
298
A
LEU
299
n
299
LEU
299
A
GLY
300
n
300
GLY
300
A
ALA
301
n
301
ALA
301
A
GLU
302
n
302
GLU
302
A
ALA
303
n
303
ALA
303
A
VAL
304
n
304
VAL
304
A
LEU
305
n
305
LEU
305
A
LEU
306
n
306
LEU
306
A
GLY
307
n
307
GLY
307
A
ARG
308
n
308
ARG
308
A
ALA
309
n
309
ALA
309
A
THR
310
n
310
THR
310
A
LEU
311
n
311
LEU
311
A
TYR
312
n
312
TYR
312
A
GLY
313
n
313
GLY
313
A
LEU
314
n
314
LEU
314
A
ALA
315
n
315
ALA
315
A
ALA
316
n
316
ALA
316
A
ARG
317
n
317
ARG
317
A
GLY
318
n
318
GLY
318
A
GLU
319
n
319
GLU
319
A
THR
320
n
320
THR
320
A
GLY
321
n
321
GLY
321
A
VAL
322
n
322
VAL
322
A
ASP
323
n
323
ASP
323
A
GLU
324
n
324
GLU
324
A
VAL
325
n
325
VAL
325
A
LEU
326
n
326
LEU
326
A
THR
327
n
327
THR
327
A
LEU
328
n
328
LEU
328
A
LEU
329
n
329
LEU
329
A
LYS
330
n
330
LYS
330
A
ALA
331
n
331
ALA
331
A
ASP
332
n
332
ASP
332
A
ILE
333
n
333
ILE
333
A
ASP
334
n
334
ASP
334
A
ARG
335
n
335
ARG
335
A
THR
336
n
336
THR
336
A
LEU
337
n
337
LEU
337
A
ALA
338
n
338
ALA
338
A
GLN
339
n
339
GLN
339
A
ILE
340
n
340
ILE
340
A
GLY
341
n
341
GLY
341
A
CYS
342
n
342
CYS
342
A
PRO
343
n
343
PRO
343
A
ASP
344
n
344
ASP
344
A
ILE
345
n
345
ILE
345
A
THR
346
n
346
THR
346
A
SER
347
n
347
SER
347
A
LEU
348
n
348
LEU
348
A
SER
349
n
349
SER
349
A
PRO
350
n
350
PRO
350
A
ASP
351
n
351
ASP
351
A
TYR
352
n
352
TYR
352
A
LEU
353
n
353
LEU
353
A
GLN
354
n
354
GLN
354
A
ASN
355
n
355
ASN
355
A
GLU
356
n
356
GLU
356
A
n
357
357
A
n
358
358
A
n
359
359
A
n
360
360
A
n
361
361
A
n
362
362
A
n
363
363
A
n
364
364
A
n
365
365
A
n
366
366
A
n
367
367
A
n
368
368
A
n
369
369
A
n
370
370
A
n
371
371
A
n
372
372
A
n
373
373
A
n
374
374
A
n
375
375
A
n
376
376
A
n
377
377
A
n
378
378
A
n
379
379
A
n
380
380
A
author_and_software_defined_assembly
PISA,PQS
4
tetrameric
16700
-118
51380
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_775
-x+2,-y+2,z
crystal symmetry operation
199.1800000000
199.1800000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_755
-y+2,x,z
crystal symmetry operation
199.1800000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
4_575
y,-x+2,z
crystal symmetry operation
0.0000000000
199.1800000000
0.0000000000
A
N
ARG
48
A
N
ARG
48
A
O
GLN
354
A
O
GLN
354
A
N
VAL
66
A
N
VAL
66
A
O
LYS
69
A
O
LYS
69
A
N
ILE
77
A
N
ILE
77
A
O
VAL
106
A
O
VAL
106
A
N
LEU
107
A
N
LEU
107
A
O
GLN
129
A
O
GLN
129
A
N
LEU
130
A
N
LEU
130
A
O
VAL
154
A
O
VAL
154
A
N
LEU
155
A
N
LEU
155
A
O
LYS
231
A
O
LYS
231
A
N
VAL
230
A
N
VAL
230
A
O
ILE
251
A
O
ILE
251
A
N
VAL
250
A
N
VAL
250
A
O
LEU
282
A
O
LEU
282
A
N
ILE
283
A
N
ILE
283
A
O
LEU
305
A
O
LEU
305
A
O
LEU
306
A
O
LEU
306
A
N
LEU
76
A
N
LEU
76
1
A
CD
ARG
70
A
CD
ARG
70
0
Y
1
A
NE
ARG
70
A
NE
ARG
70
0
Y
1
A
CZ
ARG
70
A
CZ
ARG
70
0
Y
1
A
NH1
ARG
70
A
NH1
ARG
70
0
Y
1
A
NH2
ARG
70
A
NH2
ARG
70
0
Y
1
A
CG
LYS
174
A
CG
LYS
174
0
Y
1
A
CD
LYS
174
A
CD
LYS
174
0
Y
1
A
CE
LYS
174
A
CE
LYS
174
0
Y
1
A
NZ
LYS
174
A
NZ
LYS
174
0
Y
1
A
CB
ILE
175
A
CB
ILE
175
0
Y
1
A
CG1
ILE
175
A
CG1
ILE
175
0
Y
1
A
CG2
ILE
175
A
CG2
ILE
175
0
Y
1
A
CD1
ILE
175
A
CD1
ILE
175
0
Y
1
A
CB
MET
192
A
CB
MET
192
0
Y
1
A
CG
MET
192
A
CG
MET
192
0
Y
1
A
SD
MET
192
A
SD
MET
192
0
Y
1
A
CE
MET
192
A
CE
MET
192
0
Y
1
A
CB
ASP
193
A
CB
ASP
193
0
Y
1
A
CG
ASP
193
A
CG
ASP
193
0
Y
1
A
OD1
ASP
193
A
OD1
ASP
193
0
Y
1
A
OD2
ASP
193
A
OD2
ASP
193
0
Y
1
A
CG
ARG
206
A
CG
ARG
206
0
Y
1
A
CD
ARG
206
A
CD
ARG
206
0
Y
1
A
NE
ARG
206
A
NE
ARG
206
0
Y
1
A
CZ
ARG
206
A
CZ
ARG
206
0
Y
1
A
NH1
ARG
206
A
NH1
ARG
206
0
Y
1
A
NH2
ARG
206
A
NH2
ARG
206
0
Y
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
GLN
3
A
GLN
3
1
Y
1
A
LYS
194
A
LYS
194
1
Y
1
A
ALA
195
A
ALA
195
1
Y
1
A
ASN
196
A
ASN
196
1
Y
1
A
LEU
197
A
LEU
197
1
Y
1
A
GLY
357
A
GLY
357
1
Y
1
A
VAL
358
A
VAL
358
1
Y
1
A
THR
359
A
THR
359
1
Y
1
A
ASN
360
A
ASN
360
1
Y
1
A
THR
361
A
THR
361
1
Y
1
A
ALA
362
A
ALA
362
1
Y
1
A
PRO
363
A
PRO
363
1
Y
1
A
VAL
364
A
VAL
364
1
Y
1
A
ASP
365
A
ASP
365
1
Y
1
A
HIS
366
A
HIS
366
1
Y
1
A
LEU
367
A
LEU
367
1
Y
1
A
ILE
368
A
ILE
368
1
Y
1
A
GLY
369
A
GLY
369
1
Y
1
A
LYS
370
A
LYS
370
1
Y
1
A
GLY
371
A
GLY
371
1
Y
1
A
THR
372
A
THR
372
1
Y
1
A
HIS
373
A
HIS
373
1
Y
1
A
ALA
374
A
ALA
374
1
Y
1
A
HIS
375
A
HIS
375
1
Y
1
A
HIS
376
A
HIS
376
1
Y
1
A
HIS
377
A
HIS
377
1
Y
1
A
HIS
378
A
HIS
378
1
Y
1
A
HIS
379
A
HIS
379
1
Y
1
A
HIS
380
A
HIS
380
1
Y
1
A
LEU
5
-119.52
78.87
1
A
GLU
32
38.16
-113.62
1
A
ALA
110
-99.25
30.48
1
A
PRO
176
-34.06
144.33
1
A
ASP
188
39.48
-168.68
1
A
LEU
189
160.86
36.87
1
A
MET
192
-169.22
-45.15
1
A
MET
199
-74.26
48.81
1
A
LEU
203
-83.05
32.07
1
A
MET
204
-112.27
79.56
1
A
SER
253
-172.43
148.16
1
A
SER
285
99.26
97.01
1
A
ARG
288
-134.15
-39.46
1
A
ARG
317
-140.93
30.36
PROTEIN_REP.PARAM
PROTEIN.TOP
FMN.PARAM
FMN.TOP
WATER_REP.PARAM
WATER_REP.TOP
MES.PARAM
MES.TOP
SO4.PARAM
SO4.TOP
23.8
2.38
0.00
0.00
2.38
0.00
-4.76
0.2120000
0.004
0.1750000
0.1750000
2.15
27.42
2286
28882
22876
10.0
98.4
RANDOM
53281.15
0.00
1
RESTRAINED
THROUGHOUT
0.0
0
MOLECULAR REPLACEMENT + SIR
PDB ENTRY 1GOX
Engh & Huber
FLAT MODEL
60.08
0.358
0.25
0.19
5.00
0.16
0.11
2.15
27.42
291
3060
48
0
2721
0.007
1.5
23.6
0.94
1.21
1.50
1.86
2.00
2.12
2.00
2.91
2.50
0.2240000
0.012
0.1750000
2.28
358
3345
6
9.7
96.0
12.7
2.15
30.0
1HUV
28882
28143
0.0
0.0
9.2000000
1
21.7
98.4
2.15
30.0
6.3
36.2000000
1
100
phasing
AMoRE
refinement
CNS
1.0
data reduction
DENZO
data scaling
SCALEPACK
CRYSTAL STRUCTURE OF A SOLUBLE MUTANT OF THE MEMBRANE-ASSOCIATED (S)-MANDELATE DEHYDROGENASE FROM PSEUDOMONAS PUTIDA AT 2.15A RESOLUTION
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
The biological assembly is a tetramer generated from the monomer in the
asymmetric unit by crystallographic 4-fold axes.
A
ASN
7
A
ASN
7
HELX_P
A
LEU
19
A
LEU
19
1
1
13
A
PRO
20
A
PRO
20
HELX_P
A
GLY
29
A
GLY
29
1
2
10
A
GLU
34
A
GLU
34
HELX_P
A
VAL
43
A
VAL
43
1
3
10
A
LEU
82
A
LEU
82
HELX_P
A
LEU
86
A
LEU
86
5
4
5
A
LYS
89
A
LYS
89
HELX_P
A
GLY
102
A
GLY
102
1
5
14
A
SER
114
A
SER
114
HELX_P
A
CYS
122
A
CYS
122
1
6
9
A
HIS
134
A
HIS
134
HELX_P
A
THR
148
A
THR
148
1
7
15
A
ARG
165
A
ARG
165
HELX_P
A
ASN
171
A
ASN
171
1
8
7
A
LEU
181
A
LEU
181
HELX_P
A
GLU
185
A
GLU
185
5
9
5
A
GLU
198
A
GLU
198
HELX_P
A
MET
204
A
MET
204
5
10
7
A
ASN
213
A
ASN
213
HELX_P
A
TRP
224
A
TRP
224
1
11
12
A
SER
235
A
SER
235
HELX_P
A
GLU
245
A
GLU
245
1
12
11
A
ASN
254
A
ASN
254
HELX_P
A
ARG
258
A
ARG
258
5
13
5
A
SER
265
A
SER
265
HELX_P
A
GLU
268
A
GLU
268
5
14
4
A
VAL
269
A
VAL
269
HELX_P
A
GLY
278
A
GLY
278
1
15
10
A
ARG
289
A
ARG
289
HELX_P
A
LEU
299
A
LEU
299
1
16
11
A
GLY
307
A
GLY
307
HELX_P
A
GLY
341
A
GLY
341
1
17
35
A
ASP
344
A
ASP
344
HELX_P
A
LEU
348
A
LEU
348
5
18
5
A
SER
349
A
SER
349
HELX_P
A
ASP
351
A
ASP
351
5
19
3
OXIDOREDUCTASE
TIM BARREL, OXIDOREDUCTASE
MDLB_PSEPU
UNP
1
1
P20932
GOX_SPIOL
UNP
1
176
P05414
MDLB_PSEPU
UNP
1
216
P20932
1
176
1HUV
1
176
P20932
A
1
1
176
176
195
1HUV
177
196
P05414
A
2
177
196
216
393
1HUV
197
374
P20932
A
3
197
374
1
ARG
SEE REMARK 999
ALA
15
1HUV
A
P20932
UNP
15
15
2
2
9
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
TRP
47
A
TRP
47
A
PHE
49
A
PHE
49
A
LEU
353
A
LEU
353
A
ASN
355
A
ASN
355
A
ALA
64
A
ALA
64
A
VAL
66
A
VAL
66
A
LYS
69
A
LYS
69
A
GLN
71
A
GLN
71
A
LEU
75
A
LEU
75
A
ILE
77
A
ILE
77
A
PHE
105
A
PHE
105
A
LEU
107
A
LEU
107
A
LEU
126
A
LEU
126
A
LEU
130
A
LEU
130
A
THR
152
A
THR
152
A
THR
156
A
THR
156
A
LYS
227
A
LYS
227
A
LEU
233
A
LEU
233
A
GLY
249
A
GLY
249
A
LEU
252
A
LEU
252
A
VAL
281
A
VAL
281
A
ILE
283
A
ILE
283
A
ALA
303
A
ALA
303
A
LEU
306
A
LEU
306
A
LEU
75
A
LEU
75
A
ILE
77
A
ILE
77
BINDING SITE FOR RESIDUE SO4 A 400
A
SO4
400
Software
7
BINDING SITE FOR RESIDUE FMN A 390
A
FMN
390
Software
25
BINDING SITE FOR RESIDUE MES A 890
A
MES
890
Software
7
A
TYR
131
A
TYR
131
7
1_555
A
ARG
165
A
ARG
165
7
1_555
A
HIS
255
A
HIS
255
7
1_555
A
ARG
258
A
ARG
258
7
1_555
A
FMN
390
C
FMN
7
1_555
A
HOH
1012
E
HOH
7
1_555
A
HOH
1020
E
HOH
7
1_555
A
TYR
26
A
TYR
26
25
1_555
A
LEU
27
A
LEU
27
25
1_555
A
PRO
79
A
PRO
79
25
1_555
A
THR
80
A
THR
80
25
1_555
A
GLY
81
A
GLY
81
25
1_555
A
SER
108
A
SER
108
25
1_555
A
GLN
129
A
GLN
129
25
1_555
A
TYR
131
A
TYR
131
25
1_555
A
THR
156
A
THR
156
25
1_555
A
LYS
231
A
LYS
231
25
1_555
A
SER
253
A
SER
253
25
1_555
A
HIS
255
A
HIS
255
25
1_555
A
GLY
256
A
GLY
256
25
1_555
A
ARG
258
A
ARG
258
25
1_555
A
ASP
284
A
ASP
284
25
1_555
A
SER
285
A
SER
285
25
1_555
A
GLY
286
A
GLY
286
25
1_555
A
ARG
288
A
ARG
288
25
1_555
A
GLY
307
A
GLY
307
25
1_555
A
ARG
308
A
ARG
308
25
1_555
A
SO4
400
B
SO4
25
1_555
A
HOH
898
E
HOH
25
1_555
A
HOH
925
E
HOH
25
1_555
A
HOH
932
E
HOH
25
1_555
A
HOH
938
E
HOH
25
1_555
A
TRP
87
A
TRP
87
7
6_665
A
LYS
89
A
LYS
89
7
6_665
A
ASP
240
A
ASP
240
7
1_555
A
ILE
243
A
ILE
243
7
1_555
A
LYS
276
A
LYS
276
7
1_555
A
THR
277
A
THR
277
7
1_555
A
HOH
1019
E
HOH
7
6_665
79
I 4