0.016377 0.000000 0.000000 0.000000 0.011510 0.000000 0.000000 0.000000 0.021450 0.00000 0.00000 0.00000 Park, C.H. Nienaber, V. Kong, X.P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 61.060 86.880 46.620 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C37 H48 N6 O5 S2 720.944 RITONAVIR A-84538 peptide-like C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H Y 290 N C Y 291 N C Y 292 N S Y 293 N C Y 294 N N N 295 N C N 296 N O N 297 N C N 298 N O N 299 N N N 300 S C N 301 S C N 302 N C N 303 S C N 304 N C Y 305 N C Y 306 N C Y 307 N C Y 308 N C Y 309 N C Y 310 N C N 311 N O N 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C Y 318 N C N 319 N N N 320 N N N 321 S C N 322 N C N 323 N O N 324 N C N 325 N C N 326 N C N 327 N C N 328 N N N 329 N C N 330 N O Y 331 N C Y 332 N C Y 333 N S Y 334 N C Y 335 N N N 336 N C N 337 N C N 338 N C N 339 N C N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N N N 389 S C N 390 N C N 391 N O N 392 R C N 393 N O N 394 N C N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N N N 406 S C N 407 N C N 408 N O N 409 N C Y 410 N C Y 411 N C Y 412 N C Y 413 N N Y 414 N C Y 415 N C Y 416 N C Y 417 N C Y 418 N C N 419 N O N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N N N 433 S C N 434 N C N 435 N O N 436 N C Y 437 N C Y 438 N C Y 439 N C Y 440 N C Y 441 N C Y 442 N C N 443 N O N 444 N O N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N N N 457 S C N 458 N C N 459 N O N 460 N C N 461 N C N 462 N C N 463 N O N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing Y 277 N doub Y 278 N sing N 279 N sing Y 280 N sing N 281 N sing Y 282 N sing Y 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N doub N 315 N sing N 316 N sing N 317 N sing Y 318 N doub Y 319 N sing Y 320 N sing N 321 N sing Y 322 N doub N 323 N sing Y 324 N sing N 325 N sing Y 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing Y 333 N doub Y 334 N sing Y 335 N sing N 336 N sing Y 337 N doub N 338 N sing Y 339 N sing N 340 N sing Y 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing Y 359 N doub Y 360 N sing Y 361 N sing N 362 N sing Y 363 N sing Y 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N doub N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N doub N 401 N sing N 402 N sing N 403 N sing N 404 N sing Y 405 N doub Y 406 N sing Y 407 N sing N 408 N sing Y 409 N doub Y 410 N sing Y 411 N sing N 412 N sing Y 413 N sing Y 414 N doub N 415 N sing Y 416 N doub N 417 N sing Y 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N doub N 429 N sing N 430 N sing N 431 N sing N 432 N sing Y 433 N doub Y 434 N sing Y 435 N sing N 436 N sing Y 437 N doub N 438 N sing Y 439 N doub N 440 N sing Y 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N doub N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 92 2484 2488 10.1073/pnas.92.7.2484 7708670 ABT-538 is a potent inhibitor of human immunodeficiency virus protease and has high oral bioavailability in humans. 1995 10.2210/pdb1hxw/pdb pdb_00001hxw 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 IMAGE PLATE 1994-04-20 RIGAKU RAXIS IIC M x-ray 1 1.5418 1.0 1.5418 10830.781 HIV-1 PROTEASE 3.4.23.16 2 man polymer 720.944 RITONAVIR 1 syn non-polymer 18.015 water 100 nat water no no PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Lentivirus Escherichia sample 11676 Human immunodeficiency virus 1 562 Escherichia coli SCS-1 PBS7-CI 2.85 56.3 chem_comp_atom chem_comp_bond database_2 pdbx_database_status struct_site repository Initial release Version format compliance Atomic model Database references Derived calculations Non-polymer description Structure summary Version format compliance Other Data collection Database references Derived calculations Other 1 0 1998-02-04 1 1 2008-03-03 1 2 2011-07-13 1 3 2013-02-27 1 4 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1997-01-24 REL RIT RITONAVIR HOH water Inhibitor RITONAVIR Peptide-like RIT 301 2 RIT RIT 301 B HOH 3 3 HOH HOH 100 A HOH 5 3 HOH HOH 101 A HOH 6 3 HOH HOH 102 A HOH 7 3 HOH HOH 103 A HOH 8 3 HOH HOH 104 A HOH 10 3 HOH HOH 105 A HOH 13 3 HOH HOH 106 A HOH 14 3 HOH HOH 107 A HOH 15 3 HOH HOH 108 A HOH 16 3 HOH HOH 109 A HOH 20 3 HOH HOH 110 A HOH 22 3 HOH HOH 111 A HOH 23 3 HOH HOH 112 A HOH 24 3 HOH HOH 113 A HOH 27 3 HOH HOH 114 A HOH 29 3 HOH HOH 115 A HOH 34 3 HOH HOH 116 A HOH 35 3 HOH HOH 117 A HOH 36 3 HOH HOH 118 A HOH 40 3 HOH HOH 119 A HOH 43 3 HOH HOH 120 A HOH 48 3 HOH HOH 121 A HOH 57 3 HOH HOH 122 A HOH 58 3 HOH HOH 123 A HOH 59 3 HOH HOH 124 A HOH 62 3 HOH HOH 125 A HOH 63 3 HOH HOH 126 A HOH 65 3 HOH HOH 127 A HOH 66 3 HOH HOH 128 A HOH 67 3 HOH HOH 129 A HOH 69 3 HOH HOH 130 A HOH 71 3 HOH HOH 131 A HOH 74 3 HOH HOH 132 A HOH 3 3 HOH HOH 133 A HOH 5 3 HOH HOH 134 A HOH 7 3 HOH HOH 135 A HOH 8 3 HOH HOH 136 A HOH 12 3 HOH HOH 137 A HOH 18 3 HOH HOH 138 A HOH 20 3 HOH HOH 139 A HOH 22 3 HOH HOH 140 A HOH 24 3 HOH HOH 141 A HOH 1 3 HOH HOH 302 B HOH 2 3 HOH HOH 303 B HOH 4 3 HOH HOH 304 B HOH 9 3 HOH HOH 305 B HOH 11 3 HOH HOH 306 B HOH 12 3 HOH HOH 307 B HOH 17 3 HOH HOH 308 B HOH 18 3 HOH HOH 309 B HOH 19 3 HOH HOH 310 B HOH 21 3 HOH HOH 311 B HOH 25 3 HOH HOH 312 B HOH 26 3 HOH HOH 313 B HOH 28 3 HOH HOH 314 B HOH 30 3 HOH HOH 315 B HOH 31 3 HOH HOH 316 B HOH 32 3 HOH HOH 317 B HOH 33 3 HOH HOH 318 B HOH 37 3 HOH HOH 319 B HOH 38 3 HOH HOH 320 B HOH 39 3 HOH HOH 321 B HOH 41 3 HOH HOH 322 B HOH 42 3 HOH HOH 323 B HOH 44 3 HOH HOH 324 B HOH 45 3 HOH HOH 325 B HOH 46 3 HOH HOH 326 B HOH 47 3 HOH HOH 327 B HOH 49 3 HOH HOH 328 B HOH 50 3 HOH HOH 329 B HOH 51 3 HOH HOH 330 B HOH 52 3 HOH HOH 331 B HOH 53 3 HOH HOH 332 B HOH 54 3 HOH HOH 333 B HOH 55 3 HOH HOH 334 B HOH 56 3 HOH HOH 335 B HOH 60 3 HOH HOH 336 B HOH 61 3 HOH HOH 337 B HOH 64 3 HOH HOH 338 B HOH 68 3 HOH HOH 339 B HOH 70 3 HOH HOH 340 B HOH 72 3 HOH HOH 341 B HOH 73 3 HOH HOH 342 B HOH 75 3 HOH HOH 343 B HOH 2 3 HOH HOH 344 B HOH 4 3 HOH HOH 345 B HOH 6 3 HOH HOH 346 B HOH 9 3 HOH HOH 347 B HOH 10 3 HOH HOH 348 B HOH 11 3 HOH HOH 349 B HOH 13 3 HOH HOH 350 B HOH 14 3 HOH HOH 351 B HOH 15 3 HOH HOH 352 B HOH 16 3 HOH HOH 353 B HOH 19 3 HOH HOH 354 B HOH 21 3 HOH HOH 355 B HOH 23 3 HOH HOH 356 B HOH 25 3 HOH HOH 357 B HOH 26 3 HOH HOH 358 B HOH 27 3 HOH HOH 359 B PRO 1 n 1 PRO 1 A GLN 2 n 2 GLN 2 A ILE 3 n 3 ILE 3 A THR 4 n 4 THR 4 A LEU 5 n 5 LEU 5 A TRP 6 n 6 TRP 6 A GLN 7 n 7 GLN 7 A ARG 8 n 8 ARG 8 A PRO 9 n 9 PRO 9 A LEU 10 n 10 LEU 10 A VAL 11 n 11 VAL 11 A THR 12 n 12 THR 12 A ILE 13 n 13 ILE 13 A LYS 14 n 14 LYS 14 A ILE 15 n 15 ILE 15 A GLY 16 n 16 GLY 16 A GLY 17 n 17 GLY 17 A GLN 18 n 18 GLN 18 A LEU 19 n 19 LEU 19 A LYS 20 n 20 LYS 20 A GLU 21 n 21 GLU 21 A ALA 22 n 22 ALA 22 A LEU 23 n 23 LEU 23 A LEU 24 n 24 LEU 24 A ASP 25 n 25 ASP 25 A THR 26 n 26 THR 26 A GLY 27 n 27 GLY 27 A ALA 28 n 28 ALA 28 A ASP 29 n 29 ASP 29 A ASP 30 n 30 ASP 30 A THR 31 n 31 THR 31 A VAL 32 n 32 VAL 32 A LEU 33 n 33 LEU 33 A GLU 34 n 34 GLU 34 A GLU 35 n 35 GLU 35 A MET 36 n 36 MET 36 A ASN 37 n 37 ASN 37 A LEU 38 n 38 LEU 38 A PRO 39 n 39 PRO 39 A GLY 40 n 40 GLY 40 A ARG 41 n 41 ARG 41 A TRP 42 n 42 TRP 42 A LYS 43 n 43 LYS 43 A PRO 44 n 44 PRO 44 A LYS 45 n 45 LYS 45 A MET 46 n 46 MET 46 A ILE 47 n 47 ILE 47 A GLY 48 n 48 GLY 48 A GLY 49 n 49 GLY 49 A ILE 50 n 50 ILE 50 A GLY 51 n 51 GLY 51 A GLY 52 n 52 GLY 52 A PHE 53 n 53 PHE 53 A ILE 54 n 54 ILE 54 A LYS 55 n 55 LYS 55 A VAL 56 n 56 VAL 56 A ARG 57 n 57 ARG 57 A GLN 58 n 58 GLN 58 A TYR 59 n 59 TYR 59 A ASP 60 n 60 ASP 60 A GLN 61 n 61 GLN 61 A ILE 62 n 62 ILE 62 A LEU 63 n 63 LEU 63 A ILE 64 n 64 ILE 64 A GLU 65 n 65 GLU 65 A ILE 66 n 66 ILE 66 A CYS 67 n 67 CYS 67 A GLY 68 n 68 GLY 68 A HIS 69 n 69 HIS 69 A LYS 70 n 70 LYS 70 A ALA 71 n 71 ALA 71 A ILE 72 n 72 ILE 72 A GLY 73 n 73 GLY 73 A THR 74 n 74 THR 74 A VAL 75 n 75 VAL 75 A LEU 76 n 76 LEU 76 A VAL 77 n 77 VAL 77 A GLY 78 n 78 GLY 78 A PRO 79 n 79 PRO 79 A THR 80 n 80 THR 80 A PRO 81 n 81 PRO 81 A VAL 82 n 82 VAL 82 A ASN 83 n 83 ASN 83 A ILE 84 n 84 ILE 84 A ILE 85 n 85 ILE 85 A GLY 86 n 86 GLY 86 A ARG 87 n 87 ARG 87 A ASN 88 n 88 ASN 88 A LEU 89 n 89 LEU 89 A LEU 90 n 90 LEU 90 A THR 91 n 91 THR 91 A GLN 92 n 92 GLN 92 A ILE 93 n 93 ILE 93 A GLY 94 n 94 GLY 94 A CYS 95 n 95 CYS 95 A THR 96 n 96 THR 96 A LEU 97 n 97 LEU 97 A ASN 98 n 98 ASN 98 A PHE 99 n 99 PHE 99 A PRO 1 n 1 PRO 1 B GLN 2 n 2 GLN 2 B ILE 3 n 3 ILE 3 B THR 4 n 4 THR 4 B LEU 5 n 5 LEU 5 B TRP 6 n 6 TRP 6 B GLN 7 n 7 GLN 7 B ARG 8 n 8 ARG 8 B PRO 9 n 9 PRO 9 B LEU 10 n 10 LEU 10 B VAL 11 n 11 VAL 11 B THR 12 n 12 THR 12 B ILE 13 n 13 ILE 13 B LYS 14 n 14 LYS 14 B ILE 15 n 15 ILE 15 B GLY 16 n 16 GLY 16 B GLY 17 n 17 GLY 17 B GLN 18 n 18 GLN 18 B LEU 19 n 19 LEU 19 B LYS 20 n 20 LYS 20 B GLU 21 n 21 GLU 21 B ALA 22 n 22 ALA 22 B LEU 23 n 23 LEU 23 B LEU 24 n 24 LEU 24 B ASP 25 n 25 ASP 25 B THR 26 n 26 THR 26 B GLY 27 n 27 GLY 27 B ALA 28 n 28 ALA 28 B ASP 29 n 29 ASP 29 B ASP 30 n 30 ASP 30 B THR 31 n 31 THR 31 B VAL 32 n 32 VAL 32 B LEU 33 n 33 LEU 33 B GLU 34 n 34 GLU 34 B GLU 35 n 35 GLU 35 B MET 36 n 36 MET 36 B ASN 37 n 37 ASN 37 B LEU 38 n 38 LEU 38 B PRO 39 n 39 PRO 39 B GLY 40 n 40 GLY 40 B ARG 41 n 41 ARG 41 B TRP 42 n 42 TRP 42 B LYS 43 n 43 LYS 43 B PRO 44 n 44 PRO 44 B LYS 45 n 45 LYS 45 B MET 46 n 46 MET 46 B ILE 47 n 47 ILE 47 B GLY 48 n 48 GLY 48 B GLY 49 n 49 GLY 49 B ILE 50 n 50 ILE 50 B GLY 51 n 51 GLY 51 B GLY 52 n 52 GLY 52 B PHE 53 n 53 PHE 53 B ILE 54 n 54 ILE 54 B LYS 55 n 55 LYS 55 B VAL 56 n 56 VAL 56 B ARG 57 n 57 ARG 57 B GLN 58 n 58 GLN 58 B TYR 59 n 59 TYR 59 B ASP 60 n 60 ASP 60 B GLN 61 n 61 GLN 61 B ILE 62 n 62 ILE 62 B LEU 63 n 63 LEU 63 B ILE 64 n 64 ILE 64 B GLU 65 n 65 GLU 65 B ILE 66 n 66 ILE 66 B CYS 67 n 67 CYS 67 B GLY 68 n 68 GLY 68 B HIS 69 n 69 HIS 69 B LYS 70 n 70 LYS 70 B ALA 71 n 71 ALA 71 B ILE 72 n 72 ILE 72 B GLY 73 n 73 GLY 73 B THR 74 n 74 THR 74 B VAL 75 n 75 VAL 75 B LEU 76 n 76 LEU 76 B VAL 77 n 77 VAL 77 B GLY 78 n 78 GLY 78 B PRO 79 n 79 PRO 79 B THR 80 n 80 THR 80 B PRO 81 n 81 PRO 81 B VAL 82 n 82 VAL 82 B ASN 83 n 83 ASN 83 B ILE 84 n 84 ILE 84 B ILE 85 n 85 ILE 85 B GLY 86 n 86 GLY 86 B ARG 87 n 87 ARG 87 B ASN 88 n 88 ASN 88 B LEU 89 n 89 LEU 89 B LEU 90 n 90 LEU 90 B THR 91 n 91 THR 91 B GLN 92 n 92 GLN 92 B ILE 93 n 93 ILE 93 B GLY 94 n 94 GLY 94 B CYS 95 n 95 CYS 95 B THR 96 n 96 THR 96 B LEU 97 n 97 LEU 97 B ASN 98 n 98 ASN 98 B PHE 99 n 99 PHE 99 B author_and_software_defined_assembly PISA 2 dimeric 5060 -37 9240 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 11 A O VAL 11 A N ALA 22 A N ALA 22 A O LYS 43 A O LYS 43 A N GLN 58 A N GLN 58 A O ARG 57 A O ARG 57 A N VAL 77 A N VAL 77 A O ILE 62 A O ILE 62 A N GLY 73 A N GLY 73 A O THR 96 A O THR 96 B N ASN 98 B N ASN 98 B O VAL 11 B O VAL 11 B N ALA 22 B N ALA 22 B O LYS 43 B O LYS 43 B N GLN 58 B N GLN 58 B O ARG 57 B O ARG 57 B N VAL 77 B N VAL 77 B O ILE 62 B O ILE 62 B N GLY 73 B N GLY 73 1 B B HH21 HH ARG TYR 57 59 1.33 1 7.08 0.80 106.30 113.38 A A A CD1 CG CD2 TRP TRP TRP 6 6 6 N 1 -5.69 0.80 107.30 101.61 A A A CE2 CD2 CG TRP TRP TRP 6 6 6 N 1 5.72 0.90 118.30 124.02 A A A CB CG OD1 ASP ASP ASP 30 30 30 N 1 3.29 0.50 120.30 123.59 A A A NE CZ NH1 ARG ARG ARG 41 41 41 N 1 8.81 0.80 106.30 115.11 A A A CD1 CG CD2 TRP TRP TRP 42 42 42 N 1 -6.44 1.00 110.10 103.66 A A A CG CD1 NE1 TRP TRP TRP 42 42 42 N 1 -7.49 0.80 107.30 99.81 A A A CE2 CD2 CG TRP TRP TRP 42 42 42 N 1 -22.56 2.20 111.40 88.84 A A A CG1 CB CG2 ILE ILE ILE 72 72 72 N 1 3.37 0.50 120.30 123.67 A A A NE CZ NH1 ARG ARG ARG 87 87 87 N 1 6.27 0.80 106.30 112.57 B B B CD1 CG CD2 TRP TRP TRP 6 6 6 N 1 -5.44 0.80 107.30 101.86 B B B CE2 CD2 CG TRP TRP TRP 6 6 6 N 1 4.16 0.50 120.30 124.46 B B B NE CZ NH1 ARG ARG ARG 8 8 8 N 1 6.51 0.50 120.30 126.81 B B B NE CZ NH1 ARG ARG ARG 41 41 41 N 1 6.42 0.80 106.30 112.72 B B B CD1 CG CD2 TRP TRP TRP 42 42 42 N 1 -5.64 0.80 107.30 101.66 B B B CE2 CD2 CG TRP TRP TRP 42 42 42 N 1 -13.31 1.80 114.00 100.69 B B B CA CB SG CYS CYS CYS 67 67 67 N 1 -12.49 1.90 111.40 98.91 B B B CB CA C VAL VAL VAL 82 82 82 N 1 10.10 1.60 110.90 121.00 B B B CG1 CB CG2 VAL VAL VAL 82 82 82 N 1 5.03 0.50 120.30 125.33 B B B NE CZ NH1 ARG ARG ARG 87 87 87 N 1 A A NE2 CD2 HIS HIS 69 69 -0.077 0.011 1.373 1.296 N 1 A A HH12 HH12 ARG ARG 41 41 1.16 1_555 2_565 1 A B HE21 H GLN TRP 92 42 1.34 1_555 3_555 28.7 0.2010000 0.2010000 1.8 10.0 1 2. 1.8 10.0 100 1670 50 0 1520 1.8 1HXW 18726 1. 0.0434 1 2.8 78.7 model building X-PLOR refinement X-PLOR data reduction R-AXIS data scaling R-AXIS phasing X-PLOR HIV-1 PROTEASE DIMER COMPLEXED WITH A-84538 1 N N 1 N N 2 N N 3 N N 3 N N A ARG 87 A ARG 87 HELX_P A LEU 90 A LEU 90 1 1 4 B ARG 87 B ARG 87 HELX_P B GLN 92 B GLN 92 1 2 6 HYDROLASE/HYDROLASE INHIBITOR ASPARTYL PROTEASE, HYDROLASE, ASPARTIC PROTEINASE, HIV, HYDROLASE-HYDROLASE INHIBITOR complex POL_HV1Z2 UNP 1 1 P12499 DGQYNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVR QYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEIC TEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSV PLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQH RTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTV 24 122 1HXW 1 99 P12499 A 1 1 99 24 122 1HXW 1 99 P12499 B 1 1 99 2 3 2 2 2 3 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 10 A LEU 10 A ILE 15 A ILE 15 A GLN 18 A GLN 18 A LEU 23 A LEU 23 A LYS 43 A LYS 43 A GLY 49 A GLY 49 A GLY 52 A GLY 52 A TYR 59 A TYR 59 A VAL 75 A VAL 75 A GLY 78 A GLY 78 A ILE 62 A ILE 62 A ILE 66 A ILE 66 A HIS 69 A HIS 69 A GLY 73 A GLY 73 A THR 96 A THR 96 A ASN 98 A ASN 98 B THR 96 B THR 96 B ASN 98 B ASN 98 B LEU 10 B LEU 10 B ILE 15 B ILE 15 B GLN 18 B GLN 18 B LEU 23 B LEU 23 B LYS 43 B LYS 43 B GLY 49 B GLY 49 B GLY 52 B GLY 52 B TYR 59 B TYR 59 B VAL 75 B VAL 75 B GLY 78 B GLY 78 B ILE 62 B ILE 62 B ILE 66 B ILE 66 B HIS 69 B HIS 69 B GLY 73 B GLY 73 BINDING SITE FOR RESIDUE RIT B 301 B RIT 301 Software 20 A TRP 6 A TRP 6 20 4_455 A ASP 25 A ASP 25 20 1_555 A GLY 27 A GLY 27 20 1_555 A ASP 29 A ASP 29 20 1_555 A GLY 48 A GLY 48 20 1_555 A GLY 49 A GLY 49 20 1_555 A ILE 50 A ILE 50 20 1_555 A VAL 82 A VAL 82 20 1_555 A HOH 101 D HOH 20 1_555 B ARG 8 B ARG 8 20 1_555 B ASP 25 B ASP 25 20 1_555 B GLY 27 B GLY 27 20 1_555 B ASP 29 B ASP 29 20 1_555 B ASP 30 B ASP 30 20 1_555 B VAL 32 B VAL 32 20 1_555 B GLY 49 B GLY 49 20 1_555 B ILE 50 B ILE 50 20 1_555 B PRO 81 B PRO 81 20 1_555 B HOH 302 E HOH 20 1_555 B HOH 348 E HOH 20 1_555 18 P 21 21 2