1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Kutateladze, T.
Overduin, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
US
Science
SCIEAS
0038
0036-8075
291
1793
1796
10.1126/science.291.5509.1793
11230696
Structural mechanism of endosome docking by the FYVE domain.
2001
10.2210/pdb1hyj/pdb
pdb_00001hyj
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
7232.300
ENDOSOME-ASSOCIATED PROTEIN
FYVE DOMAIN (RESIDUES 1346-1410)
1
man
polymer
65.409
ZINC ION
2
syn
non-polymer
no
no
RKWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDACFNDLQG
RKWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDACFNDLQG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
9606
Homo sapiens
562
Escherichia coli
BL21PLYSS
PLASMID
PGEX
database_2
pdbx_struct_assembly
pdbx_struct_conn_angle
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2001-03-14
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
complex of the FYVE domain and inositol 1,3-bisphosphate
RCSB
Y
RCSB
2001-01-19
REL
ZN
ZINC ION
structures with the lowest energy
99
20
2D NOESY
2D NOESY
3D_15N-separated_NOESY
3D_13C-separated_NOESY
4D_13C-separated_NOESY
HNHA
200 mM KCl
6.7
1
atm
298
K
simulated annealing
1
closest to the average
1mM FYVE domain; 20 mM d-Tris buffer; pH 6.7; 200 mM KCl; 20 mM d-DTT; 1 mM NaN3
90% H2O/10% D2O
1mM FYVE domain; 20 mM d-Tris buffer; pH 6.7; 200 mM KCl; 20 mM d-DTT; 1 mM NaN3
99.99% D2O
Delaglio
processing
NMRPipe
1
Brunger
structure solution
X-PLOR
3.84
Brunger
refinement
X-PLOR
3.84
600
Varian
INOVA
500
Varian
INOVA
ZN
66
2
ZN
ZN
66
A
ZN
67
2
ZN
ZN
67
A
ARG
1
n
1
ARG
1
A
LYS
2
n
2
LYS
2
A
TRP
3
n
3
TRP
3
A
ALA
4
n
4
ALA
4
A
GLU
5
n
5
GLU
5
A
ASP
6
n
6
ASP
6
A
ASN
7
n
7
ASN
7
A
GLU
8
n
8
GLU
8
A
VAL
9
n
9
VAL
9
A
GLN
10
n
10
GLN
10
A
ASN
11
n
11
ASN
11
A
CYS
12
n
12
CYS
12
A
MET
13
n
13
MET
13
A
ALA
14
n
14
ALA
14
A
CYS
15
n
15
CYS
15
A
GLY
16
n
16
GLY
16
A
LYS
17
n
17
LYS
17
A
GLY
18
n
18
GLY
18
A
PHE
19
n
19
PHE
19
A
SER
20
n
20
SER
20
A
VAL
21
n
21
VAL
21
A
THR
22
n
22
THR
22
A
VAL
23
n
23
VAL
23
A
ARG
24
n
24
ARG
24
A
ARG
25
n
25
ARG
25
A
HIS
26
n
26
HIS
26
A
HIS
27
n
27
HIS
27
A
CYS
28
n
28
CYS
28
A
ARG
29
n
29
ARG
29
A
GLN
30
n
30
GLN
30
A
CYS
31
n
31
CYS
31
A
GLY
32
n
32
GLY
32
A
ASN
33
n
33
ASN
33
A
ILE
34
n
34
ILE
34
A
PHE
35
n
35
PHE
35
A
CYS
36
n
36
CYS
36
A
ALA
37
n
37
ALA
37
A
GLU
38
n
38
GLU
38
A
CYS
39
n
39
CYS
39
A
SER
40
n
40
SER
40
A
ALA
41
n
41
ALA
41
A
LYS
42
n
42
LYS
42
A
ASN
43
n
43
ASN
43
A
ALA
44
n
44
ALA
44
A
LEU
45
n
45
LEU
45
A
THR
46
n
46
THR
46
A
PRO
47
n
47
PRO
47
A
SER
48
n
48
SER
48
A
SER
49
n
49
SER
49
A
LYS
50
n
50
LYS
50
A
LYS
51
n
51
LYS
51
A
PRO
52
n
52
PRO
52
A
VAL
53
n
53
VAL
53
A
ARG
54
n
54
ARG
54
A
VAL
55
n
55
VAL
55
A
CYS
56
n
56
CYS
56
A
ASP
57
n
57
ASP
57
A
ALA
58
n
58
ALA
58
A
CYS
59
n
59
CYS
59
A
PHE
60
n
60
PHE
60
A
ASN
61
n
61
ASN
61
A
ASP
62
n
62
ASP
62
A
LEU
63
n
63
LEU
63
A
GLN
64
n
64
GLN
64
A
GLY
65
n
65
GLY
65
A
author_defined_assembly
1
monomeric
A
CYS
12
A
SG
CYS
12
1_555
A
ZN
66
B
ZN
ZN
1_555
A
CYS
15
A
SG
CYS
15
1_555
140.7
A
CYS
12
A
SG
CYS
12
1_555
A
ZN
66
B
ZN
ZN
1_555
A
CYS
36
A
SG
CYS
36
1_555
80.0
A
CYS
15
A
SG
CYS
15
1_555
A
ZN
66
B
ZN
ZN
1_555
A
CYS
36
A
SG
CYS
36
1_555
138.6
A
CYS
12
A
SG
CYS
12
1_555
A
ZN
66
B
ZN
ZN
1_555
A
CYS
39
A
SG
CYS
39
1_555
101.2
A
CYS
15
A
SG
CYS
15
1_555
A
ZN
66
B
ZN
ZN
1_555
A
CYS
39
A
SG
CYS
39
1_555
77.3
A
CYS
36
A
SG
CYS
36
1_555
A
ZN
66
B
ZN
ZN
1_555
A
CYS
39
A
SG
CYS
39
1_555
106.7
A
CYS
28
A
SG
CYS
28
1_555
A
ZN
67
C
ZN
ZN
1_555
A
CYS
31
A
SG
CYS
31
1_555
141.6
A
CYS
28
A
SG
CYS
28
1_555
A
ZN
67
C
ZN
ZN
1_555
A
CYS
56
A
SG
CYS
56
1_555
89.4
A
CYS
31
A
SG
CYS
31
1_555
A
ZN
67
C
ZN
ZN
1_555
A
CYS
56
A
SG
CYS
56
1_555
128.9
A
CYS
28
A
SG
CYS
28
1_555
A
ZN
67
C
ZN
ZN
1_555
A
CYS
59
A
SG
CYS
59
1_555
104.5
A
CYS
31
A
SG
CYS
31
1_555
A
ZN
67
C
ZN
ZN
1_555
A
CYS
59
A
SG
CYS
59
1_555
70.3
A
CYS
56
A
SG
CYS
56
1_555
A
ZN
67
C
ZN
ZN
1_555
A
CYS
59
A
SG
CYS
59
1_555
106.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
HIS
26
A
O
HIS
26
A
N
PHE
35
A
N
PHE
35
A
O
THR
46
A
O
THR
46
A
N
SER
49
A
N
SER
49
1
A
A
O
H
ASP
VAL
6
9
1.54
1
A
A
O
H
ALA
VAL
44
53
1.58
2
A
A
O
H
CYS
PHE
56
60
1.54
2
A
A
O
H
PHE
GLN
60
64
1.55
3
A
A
O
H
GLU
ASN
5
7
1.53
3
A
A
O
H
HIS
PHE
26
35
1.56
3
A
A
H
O
CYS
ASN
28
33
1.56
3
A
A
O
H
ALA
VAL
44
53
1.60
5
A
A
O
H
GLU
ASN
5
7
1.54
6
A
A
H
O
CYS
ASN
28
33
1.55
6
A
A
O
H
ALA
VAL
44
53
1.55
6
A
A
O
H
ALA
ASP
4
6
1.57
7
A
A
O
H
ASP
ASN
57
61
1.53
7
A
A
H
O
CYS
ASN
28
33
1.54
10
A
A
H
O
CYS
ASN
28
33
1.57
12
A
A
O
H
ALA
VAL
44
53
1.58
13
A
A
O
H
HIS
PHE
26
35
1.48
13
A
A
O
H
TRP
GLU
3
5
1.56
13
A
A
H
O
CYS
ASN
28
33
1.58
14
A
A
H
O
CYS
ASN
28
33
1.57
15
A
A
O
HD21
VAL
ASN
9
11
1.48
15
A
A
H
O
CYS
ASN
28
33
1.51
15
A
A
O
H
CYS
PHE
56
60
1.58
18
A
A
O
H
TRP
GLU
3
5
1.59
19
A
A
O
H
SER
VAL
20
23
1.55
19
A
A
O
H
SER
LYS
49
51
1.56
19
A
A
O
H
CYS
SER
36
40
1.58
1
A
ARG
1
0.270
SIDE CHAIN
1
A
ARG
24
0.129
SIDE CHAIN
1
A
ARG
25
0.311
SIDE CHAIN
1
A
ARG
29
0.253
SIDE CHAIN
1
A
ARG
54
0.198
SIDE CHAIN
2
A
ARG
1
0.290
SIDE CHAIN
2
A
ARG
24
0.274
SIDE CHAIN
2
A
ARG
25
0.185
SIDE CHAIN
2
A
ARG
29
0.309
SIDE CHAIN
2
A
ARG
54
0.181
SIDE CHAIN
3
A
ARG
1
0.318
SIDE CHAIN
3
A
ARG
24
0.091
SIDE CHAIN
3
A
ARG
25
0.190
SIDE CHAIN
3
A
ARG
29
0.303
SIDE CHAIN
3
A
ARG
54
0.309
SIDE CHAIN
4
A
ARG
1
0.313
SIDE CHAIN
4
A
ARG
24
0.299
SIDE CHAIN
4
A
ARG
25
0.222
SIDE CHAIN
4
A
ARG
29
0.314
SIDE CHAIN
4
A
ARG
54
0.316
SIDE CHAIN
5
A
ARG
1
0.305
SIDE CHAIN
5
A
ARG
24
0.276
SIDE CHAIN
5
A
ARG
25
0.286
SIDE CHAIN
5
A
ARG
54
0.205
SIDE CHAIN
6
A
ARG
1
0.218
SIDE CHAIN
6
A
ARG
24
0.306
SIDE CHAIN
6
A
ARG
25
0.278
SIDE CHAIN
6
A
ARG
29
0.309
SIDE CHAIN
6
A
ARG
54
0.228
SIDE CHAIN
7
A
ARG
1
0.175
SIDE CHAIN
7
A
ARG
24
0.286
SIDE CHAIN
7
A
ARG
25
0.299
SIDE CHAIN
7
A
ARG
29
0.140
SIDE CHAIN
7
A
ARG
54
0.315
SIDE CHAIN
8
A
ARG
1
0.194
SIDE CHAIN
8
A
ARG
24
0.281
SIDE CHAIN
8
A
ARG
25
0.220
SIDE CHAIN
8
A
ARG
29
0.299
SIDE CHAIN
8
A
ARG
54
0.317
SIDE CHAIN
9
A
ARG
1
0.214
SIDE CHAIN
9
A
ARG
24
0.082
SIDE CHAIN
9
A
ARG
25
0.137
SIDE CHAIN
9
A
ARG
29
0.153
SIDE CHAIN
9
A
ARG
54
0.208
SIDE CHAIN
10
A
ARG
1
0.315
SIDE CHAIN
10
A
ARG
24
0.290
SIDE CHAIN
10
A
ARG
25
0.266
SIDE CHAIN
10
A
ARG
29
0.091
SIDE CHAIN
10
A
ARG
54
0.252
SIDE CHAIN
11
A
ARG
1
0.110
SIDE CHAIN
11
A
ARG
24
0.279
SIDE CHAIN
11
A
ARG
25
0.134
SIDE CHAIN
11
A
ARG
29
0.296
SIDE CHAIN
11
A
ARG
54
0.120
SIDE CHAIN
12
A
ARG
1
0.269
SIDE CHAIN
12
A
ARG
24
0.305
SIDE CHAIN
12
A
ARG
25
0.281
SIDE CHAIN
12
A
ARG
29
0.256
SIDE CHAIN
12
A
ARG
54
0.196
SIDE CHAIN
13
A
ARG
1
0.316
SIDE CHAIN
13
A
ARG
24
0.318
SIDE CHAIN
13
A
ARG
25
0.300
SIDE CHAIN
13
A
ARG
29
0.288
SIDE CHAIN
13
A
ARG
54
0.272
SIDE CHAIN
14
A
ARG
1
0.131
SIDE CHAIN
14
A
ARG
25
0.170
SIDE CHAIN
14
A
ARG
29
0.310
SIDE CHAIN
14
A
ARG
54
0.268
SIDE CHAIN
15
A
ARG
1
0.131
SIDE CHAIN
15
A
ARG
24
0.253
SIDE CHAIN
15
A
ARG
25
0.301
SIDE CHAIN
15
A
ARG
29
0.140
SIDE CHAIN
15
A
ARG
54
0.210
SIDE CHAIN
16
A
ARG
1
0.170
SIDE CHAIN
16
A
ARG
24
0.289
SIDE CHAIN
16
A
ARG
25
0.086
SIDE CHAIN
16
A
ARG
29
0.117
SIDE CHAIN
16
A
ARG
54
0.312
SIDE CHAIN
17
A
ARG
1
0.272
SIDE CHAIN
17
A
ARG
24
0.272
SIDE CHAIN
17
A
ARG
25
0.264
SIDE CHAIN
17
A
ARG
29
0.195
SIDE CHAIN
17
A
ARG
54
0.136
SIDE CHAIN
18
A
ARG
1
0.294
SIDE CHAIN
18
A
ARG
24
0.314
SIDE CHAIN
18
A
ARG
25
0.214
SIDE CHAIN
18
A
ARG
29
0.301
SIDE CHAIN
18
A
ARG
54
0.309
SIDE CHAIN
19
A
ARG
1
0.293
SIDE CHAIN
19
A
ARG
24
0.299
SIDE CHAIN
19
A
ARG
25
0.259
SIDE CHAIN
19
A
ARG
29
0.317
SIDE CHAIN
19
A
ARG
54
0.314
SIDE CHAIN
20
A
ARG
1
0.201
SIDE CHAIN
20
A
ARG
24
0.286
SIDE CHAIN
20
A
ARG
25
0.220
SIDE CHAIN
20
A
ARG
29
0.216
SIDE CHAIN
20
A
ARG
54
0.317
SIDE CHAIN
1
A
LYS
2
-122.29
-54.98
1
A
TRP
3
-152.80
-97.52
1
A
ALA
4
-69.49
83.09
1
A
ASP
6
-35.88
-28.90
1
A
ASN
7
-38.85
-38.82
1
A
ASN
11
-161.87
103.65
1
A
ALA
14
-102.91
-67.97
2
A
LYS
2
-171.23
-132.01
2
A
TRP
3
-62.51
-102.31
2
A
GLU
5
49.32
19.05
2
A
ASP
6
35.65
29.88
2
A
GLN
10
-141.18
-2.47
2
A
ALA
14
-80.29
-71.76
2
A
PHE
19
-53.67
102.60
2
A
GLU
38
-42.50
-75.26
3
A
LYS
2
-120.07
-67.50
3
A
TRP
3
-66.50
-85.85
3
A
ASP
6
66.02
-58.71
3
A
CYS
12
-43.77
97.90
3
A
ALA
14
-73.24
-81.96
3
A
LYS
17
-35.65
138.96
3
A
PHE
19
-39.57
151.83
3
A
GLN
30
-75.47
-88.04
3
A
GLU
38
-59.22
-76.88
3
A
SER
40
-90.30
31.82
3
A
LYS
50
-104.83
52.62
4
A
ASN
11
-161.98
119.36
4
A
ALA
14
-86.13
-79.89
4
A
PHE
19
-51.57
98.81
4
A
ALA
41
-84.87
44.63
5
A
GLU
5
-154.27
-69.96
5
A
ASP
6
66.26
-59.11
5
A
ALA
14
-80.58
-80.64
5
A
LYS
50
-65.46
67.43
6
A
TRP
3
-145.60
-96.41
6
A
GLU
5
67.01
-52.59
6
A
ASP
6
75.40
-51.41
6
A
ALA
14
-76.73
-76.96
6
A
GLU
38
-74.59
-80.93
6
A
CYS
56
-43.41
155.33
7
A
LYS
2
-135.92
-60.20
7
A
TRP
3
172.57
-46.69
7
A
GLU
8
-148.62
31.80
7
A
ALA
14
-77.50
-78.67
7
A
PHE
19
-49.08
107.54
8
A
TRP
3
-147.92
-106.89
8
A
GLU
5
52.15
19.48
8
A
ASP
6
57.08
17.13
8
A
GLN
10
-141.22
32.36
8
A
ASN
11
-170.33
-169.77
8
A
ALA
14
-92.24
-73.81
8
A
LYS
17
-45.54
104.42
8
A
PHE
19
-46.45
95.76
8
A
SER
20
-83.50
-152.19
8
A
ALA
41
-87.85
42.80
8
A
SER
49
-100.87
-115.40
8
A
LYS
50
-178.66
40.10
8
A
ALA
58
-42.69
-70.03
9
A
LYS
2
62.87
-70.25
9
A
ALA
4
-66.10
75.14
9
A
GLU
5
-106.28
51.82
9
A
GLU
8
-168.58
35.74
9
A
PHE
19
-56.64
92.43
9
A
SER
49
-102.15
-149.61
10
A
LYS
2
-63.96
-101.85
10
A
TRP
3
-177.43
26.45
10
A
GLU
5
-155.56
-66.64
10
A
ASP
6
176.95
-67.87
10
A
GLN
30
-74.90
-82.20
10
A
GLU
38
-53.54
-71.89
10
A
SER
40
-91.42
33.68
10
A
LYS
50
-105.09
52.78
11
A
GLU
5
-100.83
-66.93
11
A
ASP
6
-178.38
59.56
11
A
ALA
14
-93.81
-81.08
11
A
SER
20
-152.62
-139.66
11
A
GLN
30
-72.27
-82.15
11
A
GLU
38
-41.61
-73.34
11
A
SER
40
-90.32
30.42
11
A
ALA
41
-85.29
42.46
11
A
ASP
57
-39.11
-33.41
12
A
TRP
3
-178.31
-65.98
12
A
GLU
5
-172.17
42.92
12
A
ASP
6
40.32
27.60
12
A
GLU
8
173.21
-28.36
12
A
GLN
10
-140.80
14.97
12
A
ALA
14
-92.21
-82.42
12
A
PHE
19
-55.46
95.26
12
A
SER
20
-97.02
-150.22
12
A
GLN
30
-79.74
-70.71
12
A
SER
40
-90.82
34.60
12
A
LYS
50
-90.63
50.69
12
A
ASP
57
-37.66
-30.03
13
A
ALA
4
-67.41
58.89
13
A
GLU
5
-45.56
-73.15
13
A
ASN
7
51.01
17.82
13
A
GLU
8
-178.54
30.11
13
A
ALA
14
-98.26
-89.47
13
A
SER
20
-161.32
-143.11
13
A
GLN
30
-80.43
-89.04
13
A
LYS
50
-61.80
80.61
14
A
GLU
5
-97.52
53.59
14
A
GLU
8
-160.62
22.58
14
A
GLN
10
-150.81
21.39
14
A
SER
20
-146.43
-155.28
14
A
GLN
30
-81.79
-71.77
14
A
ALA
41
-87.06
39.41
14
A
LYS
50
-61.24
81.17
14
A
CYS
56
-42.36
158.45
15
A
TRP
3
-109.46
-94.81
15
A
VAL
9
-94.84
-61.45
15
A
GLN
10
38.95
27.64
15
A
ASN
11
-170.97
144.68
15
A
ALA
14
-86.48
-77.28
15
A
PHE
19
-56.00
106.80
15
A
SER
20
-121.09
-168.09
15
A
GLN
30
-72.86
-70.18
16
A
LYS
2
57.34
-163.27
16
A
ALA
14
-81.79
-80.97
16
A
PHE
19
-49.26
162.65
16
A
SER
20
-170.21
-168.65
16
A
SER
48
-82.04
-74.33
17
A
LYS
2
-103.34
-60.25
17
A
TRP
3
-145.57
-154.73
17
A
ALA
4
-56.42
82.13
17
A
ASP
6
-177.33
28.27
17
A
GLU
8
-172.46
38.19
17
A
VAL
9
-79.70
47.05
17
A
PHE
19
-50.07
107.83
17
A
GLU
38
-49.35
-73.11
17
A
SER
49
-102.10
-162.64
18
A
LYS
2
-176.00
148.08
18
A
TRP
3
58.78
150.18
18
A
ALA
4
-68.71
57.48
18
A
GLU
8
-177.99
34.58
18
A
VAL
9
-108.66
71.91
18
A
CYS
12
-40.11
97.00
18
A
ALA
14
-75.68
-77.73
18
A
GLN
30
-80.05
-72.80
18
A
CYS
36
-101.55
-169.46
18
A
SER
49
-142.01
10.23
18
A
LYS
50
43.26
76.39
18
A
PRO
52
-66.95
74.46
18
A
PHE
60
-39.75
-37.21
19
A
ALA
4
-59.03
84.16
19
A
VAL
9
-102.86
74.63
19
A
ALA
14
-78.14
-82.56
19
A
ALA
37
-49.03
-70.93
19
A
GLU
38
-38.39
-39.32
19
A
LYS
50
-66.94
56.32
20
A
ALA
4
-59.30
77.11
20
A
GLN
10
-142.30
38.24
20
A
CYS
12
-49.94
100.78
20
A
ALA
14
-73.66
-82.66
20
A
SER
20
-164.36
-167.26
20
A
GLN
30
-78.09
-74.86
20
A
GLU
38
-44.27
-76.00
20
A
LYS
50
-91.11
51.70
20
A
CYS
56
-46.86
153.72
SOLUTION STRUCTURE OF THE EEA1 FYVE DOMAIN
1
N
N
2
N
N
2
N
N
A
GLU
5
A
GLU
5
HELX_P
A
VAL
9
A
VAL
9
5
1
5
A
CYS
56
A
CYS
56
HELX_P
A
GLN
64
A
GLN
64
1
2
9
metalc
2.737
A
CYS
12
A
SG
CYS
12
1_555
A
ZN
66
B
ZN
ZN
1_555
metalc
2.765
A
CYS
15
A
SG
CYS
15
1_555
A
ZN
66
B
ZN
ZN
1_555
metalc
2.811
A
CYS
28
A
SG
CYS
28
1_555
A
ZN
67
C
ZN
ZN
1_555
metalc
2.805
A
CYS
31
A
SG
CYS
31
1_555
A
ZN
67
C
ZN
ZN
1_555
metalc
2.593
A
CYS
36
A
SG
CYS
36
1_555
A
ZN
66
B
ZN
ZN
1_555
metalc
2.601
A
CYS
39
A
SG
CYS
39
1_555
A
ZN
66
B
ZN
ZN
1_555
metalc
2.788
A
CYS
56
A
SG
CYS
56
1_555
A
ZN
67
C
ZN
ZN
1_555
metalc
2.653
A
CYS
59
A
SG
CYS
59
1_555
A
ZN
67
C
ZN
ZN
1_555
ENDOCYTOSIS/EXOCYTOSIS
beta sheet, alpha helix, zinc cluster, ENDOCYTOSIS-EXOCYTOSIS COMPLEX
EEA1_HUMAN
UNP
1
1346
Q15075
RKWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDACFNDLQG
1346
1410
1HYJ
1
65
Q15075
A
1
1
65
2
2
anti-parallel
anti-parallel
A
HIS
26
A
HIS
26
A
HIS
27
A
HIS
27
A
ILE
34
A
ILE
34
A
PHE
35
A
PHE
35
A
ASN
43
A
ASN
43
A
THR
46
A
THR
46
A
SER
49
A
SER
49
A
ARG
54
A
ARG
54
BINDING SITE FOR RESIDUE ZN A 66
A
ZN
66
Software
4
BINDING SITE FOR RESIDUE ZN A 67
A
ZN
67
Software
4
A
CYS
12
A
CYS
12
4
1_555
A
CYS
15
A
CYS
15
4
1_555
A
CYS
36
A
CYS
36
4
1_555
A
CYS
39
A
CYS
39
4
1_555
A
CYS
28
A
CYS
28
4
1_555
A
CYS
31
A
CYS
31
4
1_555
A
CYS
56
A
CYS
56
4
1_555
A
CYS
59
A
CYS
59
4
1_555
1
P 1