0.01389
0.00802
0.00000
0.00000
0.01604
0.00000
0.00000
0.00000
0.01524
0.00000
0.00000
0.00000
Molteni, V.
Greenwald, J.
Rhodes, D.
Hwang, Y.
Kwiatkowski, W.
Bushman, F.D.
Siegel, J.S.
Choe, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
72.010
72.010
65.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H12 As N O3 S
241.140
n
S-DIMETHYLARSINOYL-CYSTEINE
CYSTEIN-S-YL CACODYLATE
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C24 H20 As 1
383.337
TETRAPHENYL-ARSONIUM
non-polymer
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
57
536
544
10.1107/S0907444901001652
11264582
Identification of a small-molecule binding site at the dimer interface of the HIV integrase catalytic domain.
2001
10.2210/pdb1hyv/pdb
pdb_00001hyv
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
1997-05-01
ADSC QUANTUM 4
Si
SINGLE WAVELENGTH
M
x-ray
1
1.04
1.0
BL1-5
SSRL
1.04
SYNCHROTRON
SSRL BEAMLINE BL1-5
18434.723
INTEGRASE
2.7.7.49
CATALYTIC CORE DOMAIN (RESIDUES 50-212)
F185K
1
man
polymer
96.063
SULFATE ION
1
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
383.337
TETRAPHENYL-ARSONIUM
1
syn
non-polymer
18.015
water
98
nat
water
no
yes
GSHMHGQVDCSPGIWQLD(CAF)THLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFT
STTVKAA(CAF)WWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNKKRKGGIGGYSAGE
RIVDIIATDIQTKE
GSHMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTV
KAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNKKRKGGIGGYSAGERIVDIIAT
DIQTKE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Lentivirus
Escherichia
sample
11676
Human immunodeficiency virus 1
562
Escherichia coli
1
2.66
53.80
VAPOR DIFFUSION, HANGING DROP
6.5
PEG8000, NH4SO4, Cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
software
database_2
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Database references
Derived calculations
1
0
2001-04-04
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2021-10-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1HYZ CONTAINS THE SAME PROTEIN
The protein was expressed with N-term 6x histidine
tag which when removed with thrombin leaves GSH at the
N-terminus.
RCSB
Y
RCSB
2001-01-22
REL
REL
SO4
SULFATE ION
CL
CHLORIDE ION
TTA
TETRAPHENYL-ARSONIUM
HOH
water
SUL
302
2
SO4
SO4
302
A
IUM
303
3
CL
CL
303
A
TAC
1
4
TTA
TTA
304
A
WAT
1
5
HOH
HOH
305
A
WAT
2
5
HOH
HOH
306
A
WAT
3
5
HOH
HOH
307
A
WAT
4
5
HOH
HOH
308
A
WAT
5
5
HOH
HOH
309
A
WAT
6
5
HOH
HOH
310
A
WAT
7
5
HOH
HOH
311
A
WAT
8
5
HOH
HOH
312
A
WAT
9
5
HOH
HOH
313
A
WAT
10
5
HOH
HOH
314
A
WAT
11
5
HOH
HOH
315
A
WAT
12
5
HOH
HOH
316
A
WAT
13
5
HOH
HOH
317
A
WAT
14
5
HOH
HOH
318
A
WAT
15
5
HOH
HOH
319
A
WAT
16
5
HOH
HOH
320
A
WAT
17
5
HOH
HOH
321
A
WAT
18
5
HOH
HOH
322
A
WAT
19
5
HOH
HOH
323
A
WAT
20
5
HOH
HOH
324
A
WAT
21
5
HOH
HOH
325
A
WAT
22
5
HOH
HOH
326
A
WAT
23
5
HOH
HOH
327
A
WAT
24
5
HOH
HOH
328
A
WAT
25
5
HOH
HOH
329
A
WAT
26
5
HOH
HOH
330
A
WAT
27
5
HOH
HOH
331
A
WAT
28
5
HOH
HOH
332
A
WAT
29
5
HOH
HOH
333
A
WAT
30
5
HOH
HOH
334
A
WAT
31
5
HOH
HOH
335
A
WAT
32
5
HOH
HOH
336
A
WAT
33
5
HOH
HOH
337
A
WAT
34
5
HOH
HOH
338
A
WAT
35
5
HOH
HOH
339
A
WAT
36
5
HOH
HOH
340
A
WAT
37
5
HOH
HOH
341
A
WAT
38
5
HOH
HOH
342
A
WAT
39
5
HOH
HOH
343
A
WAT
40
5
HOH
HOH
344
A
WAT
41
5
HOH
HOH
345
A
WAT
42
5
HOH
HOH
346
A
WAT
43
5
HOH
HOH
347
A
WAT
44
5
HOH
HOH
348
A
WAT
45
5
HOH
HOH
349
A
WAT
46
5
HOH
HOH
350
A
WAT
47
5
HOH
HOH
351
A
WAT
48
5
HOH
HOH
352
A
WAT
49
5
HOH
HOH
353
A
WAT
50
5
HOH
HOH
354
A
WAT
51
5
HOH
HOH
355
A
WAT
52
5
HOH
HOH
356
A
WAT
53
5
HOH
HOH
357
A
WAT
54
5
HOH
HOH
358
A
WAT
55
5
HOH
HOH
359
A
WAT
56
5
HOH
HOH
360
A
WAT
57
5
HOH
HOH
361
A
WAT
58
5
HOH
HOH
362
A
WAT
59
5
HOH
HOH
363
A
WAT
60
5
HOH
HOH
364
A
WAT
61
5
HOH
HOH
365
A
WAT
62
5
HOH
HOH
366
A
WAT
63
5
HOH
HOH
367
A
WAT
64
5
HOH
HOH
368
A
WAT
65
5
HOH
HOH
369
A
WAT
66
5
HOH
HOH
370
A
WAT
67
5
HOH
HOH
371
A
WAT
68
5
HOH
HOH
372
A
WAT
69
5
HOH
HOH
373
A
WAT
70
5
HOH
HOH
374
A
WAT
71
5
HOH
HOH
375
A
WAT
72
5
HOH
HOH
376
A
WAT
73
5
HOH
HOH
377
A
WAT
74
5
HOH
HOH
378
A
WAT
75
5
HOH
HOH
379
A
WAT
76
5
HOH
HOH
380
A
WAT
77
5
HOH
HOH
381
A
WAT
78
5
HOH
HOH
382
A
WAT
79
5
HOH
HOH
383
A
WAT
80
5
HOH
HOH
384
A
WAT
81
5
HOH
HOH
385
A
WAT
82
5
HOH
HOH
386
A
WAT
83
5
HOH
HOH
387
A
WAT
84
5
HOH
HOH
388
A
WAT
85
5
HOH
HOH
389
A
WAT
86
5
HOH
HOH
390
A
WAT
87
5
HOH
HOH
391
A
WAT
88
5
HOH
HOH
392
A
WAT
89
5
HOH
HOH
393
A
WAT
90
5
HOH
HOH
394
A
WAT
91
5
HOH
HOH
395
A
WAT
92
5
HOH
HOH
396
A
WAT
93
5
HOH
HOH
397
A
WAT
94
5
HOH
HOH
398
A
WAT
95
5
HOH
HOH
399
A
WAT
96
5
HOH
HOH
400
A
WAT
97
5
HOH
HOH
401
A
WAT
98
5
HOH
HOH
402
A
n
1
47
A
n
2
48
A
n
3
49
A
n
4
50
A
n
5
51
A
n
6
52
A
n
7
53
A
n
8
54
A
n
9
55
A
n
10
56
A
SER
57
n
11
SER
57
A
PRO
58
n
12
PRO
58
A
GLY
59
n
13
GLY
59
A
ILE
60
n
14
ILE
60
A
TRP
61
n
15
TRP
61
A
GLN
62
n
16
GLN
62
A
LEU
63
n
17
LEU
63
A
ASP
64
n
18
ASP
64
A
CYS
65
n
19
CAF
65
A
THR
66
n
20
THR
66
A
HIS
67
n
21
HIS
67
A
LEU
68
n
22
LEU
68
A
GLU
69
n
23
GLU
69
A
GLY
70
n
24
GLY
70
A
LYS
71
n
25
LYS
71
A
VAL
72
n
26
VAL
72
A
ILE
73
n
27
ILE
73
A
LEU
74
n
28
LEU
74
A
VAL
75
n
29
VAL
75
A
ALA
76
n
30
ALA
76
A
VAL
77
n
31
VAL
77
A
HIS
78
n
32
HIS
78
A
VAL
79
n
33
VAL
79
A
ALA
80
n
34
ALA
80
A
SER
81
n
35
SER
81
A
GLY
82
n
36
GLY
82
A
TYR
83
n
37
TYR
83
A
ILE
84
n
38
ILE
84
A
GLU
85
n
39
GLU
85
A
ALA
86
n
40
ALA
86
A
GLU
87
n
41
GLU
87
A
VAL
88
n
42
VAL
88
A
ILE
89
n
43
ILE
89
A
PRO
90
n
44
PRO
90
A
ALA
91
n
45
ALA
91
A
GLU
92
n
46
GLU
92
A
THR
93
n
47
THR
93
A
GLY
94
n
48
GLY
94
A
GLN
95
n
49
GLN
95
A
GLU
96
n
50
GLU
96
A
THR
97
n
51
THR
97
A
ALA
98
n
52
ALA
98
A
TYR
99
n
53
TYR
99
A
PHE
100
n
54
PHE
100
A
LEU
101
n
55
LEU
101
A
LEU
102
n
56
LEU
102
A
LYS
103
n
57
LYS
103
A
LEU
104
n
58
LEU
104
A
ALA
105
n
59
ALA
105
A
GLY
106
n
60
GLY
106
A
ARG
107
n
61
ARG
107
A
TRP
108
n
62
TRP
108
A
PRO
109
n
63
PRO
109
A
VAL
110
n
64
VAL
110
A
ALA
111
n
65
LYS
111
A
THR
112
n
66
THR
112
A
VAL
113
n
67
VAL
113
A
HIS
114
n
68
HIS
114
A
THR
115
n
69
THR
115
A
ASP
116
n
70
ASP
116
A
ASN
117
n
71
ASN
117
A
GLY
118
n
72
GLY
118
A
SER
119
n
73
SER
119
A
ASN
120
n
74
ASN
120
A
PHE
121
n
75
PHE
121
A
THR
122
n
76
THR
122
A
SER
123
n
77
SER
123
A
THR
124
n
78
THR
124
A
THR
125
n
79
THR
125
A
VAL
126
n
80
VAL
126
A
LYS
127
n
81
LYS
127
A
ALA
128
n
82
ALA
128
A
ALA
129
n
83
ALA
129
A
CYS
130
n
84
CAF
130
A
TRP
131
n
85
TRP
131
A
TRP
132
n
86
TRP
132
A
ALA
133
n
87
ALA
133
A
GLY
134
n
88
GLY
134
A
ILE
135
n
89
ILE
135
A
LYS
136
n
90
LYS
136
A
GLN
137
n
91
GLN
137
A
GLU
138
n
92
GLU
138
A
PHE
139
n
93
PHE
139
A
GLY
140
n
94
GLY
140
A
n
95
141
A
n
96
142
A
n
97
143
A
n
98
144
A
n
99
145
A
n
100
146
A
n
101
147
A
ALA
148
n
102
GLN
148
A
GLY
149
n
103
GLY
149
A
ALA
150
n
104
VAL
150
A
ILE
151
n
105
ILE
151
A
GLU
152
n
106
GLU
152
A
ALA
153
n
107
SER
153
A
MET
154
n
108
MET
154
A
ASN
155
n
109
ASN
155
A
LYS
156
n
110
LYS
156
A
GLU
157
n
111
GLU
157
A
LEU
158
n
112
LEU
158
A
LYS
159
n
113
LYS
159
A
LYS
160
n
114
LYS
160
A
ILE
161
n
115
ILE
161
A
ILE
162
n
116
ILE
162
A
GLY
163
n
117
GLY
163
A
GLN
164
n
118
GLN
164
A
VAL
165
n
119
VAL
165
A
ARG
166
n
120
ARG
166
A
ALA
167
n
121
ASP
167
A
GLN
168
n
122
GLN
168
A
ALA
169
n
123
ALA
169
A
GLU
170
n
124
GLU
170
A
HIS
171
n
125
HIS
171
A
LEU
172
n
126
LEU
172
A
LYS
173
n
127
LYS
173
A
THR
174
n
128
THR
174
A
ALA
175
n
129
ALA
175
A
VAL
176
n
130
VAL
176
A
GLN
177
n
131
GLN
177
A
MET
178
n
132
MET
178
A
ALA
179
n
133
ALA
179
A
VAL
180
n
134
VAL
180
A
PHE
181
n
135
PHE
181
A
ILE
182
n
136
ILE
182
A
HIS
183
n
137
HIS
183
A
ASN
184
n
138
ASN
184
A
LYS
185
n
139
LYS
185
A
LYS
186
n
140
LYS
186
A
ARG
187
n
141
ARG
187
A
LYS
188
n
142
LYS
188
A
GLY
189
n
143
GLY
189
A
n
144
190
A
n
145
191
A
n
146
192
A
GLY
193
n
147
GLY
193
A
TYR
194
n
148
TYR
194
A
SER
195
n
149
SER
195
A
ALA
196
n
150
ALA
196
A
GLY
197
n
151
GLY
197
A
GLU
198
n
152
GLU
198
A
ARG
199
n
153
ARG
199
A
ILE
200
n
154
ILE
200
A
VAL
201
n
155
VAL
201
A
ASP
202
n
156
ASP
202
A
ILE
203
n
157
ILE
203
A
ILE
204
n
158
ILE
204
A
ALA
205
n
159
ALA
205
A
THR
206
n
160
THR
206
A
ASP
207
n
161
ASP
207
A
ILE
208
n
162
ILE
208
A
GLN
209
n
163
GLN
209
A
ALA
210
n
164
THR
210
A
n
165
211
A
n
166
212
A
author_defined_assembly
2
dimeric
A
CAF
65
S-DIMETHYLARSINOYL-CYSTEINE
A
CAF
19
CYS
A
CAF
130
S-DIMETHYLARSINOYL-CYSTEINE
A
CAF
84
CYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
89
A
N
ILE
43
A
O
VAL
72
A
O
VAL
26
A
N
VAL
77
A
N
VAL
31
A
O
GLN
62
A
O
GLN
16
A
N
TRP
61
A
N
TRP
15
A
O
THR
112
A
O
THR
66
A
N
VAL
113
A
N
VAL
67
A
O
LYS
136
A
O
LYS
90
1
A
CE2
CAF
65
A
CE2
CAF
19
1
Y
1
A
CG
LYS
111
A
CG
LYS
65
1
Y
1
A
CD
LYS
111
A
CD
LYS
65
1
Y
1
A
CE
LYS
111
A
CE
LYS
65
1
Y
1
A
NZ
LYS
111
A
NZ
LYS
65
1
Y
1
A
CE2
CAF
130
A
CE2
CAF
84
1
Y
1
A
CG
GLN
148
A
CG
GLN
102
1
Y
1
A
CD
GLN
148
A
CD
GLN
102
1
Y
1
A
OE1
GLN
148
A
OE1
GLN
102
1
Y
1
A
NE2
GLN
148
A
NE2
GLN
102
1
Y
1
A
CG1
VAL
150
A
CG1
VAL
104
1
Y
1
A
CG2
VAL
150
A
CG2
VAL
104
1
Y
1
A
OG
SER
153
A
OG
SER
107
1
Y
1
A
CG
ASP
167
A
CG
ASP
121
1
Y
1
A
OD1
ASP
167
A
OD1
ASP
121
1
Y
1
A
OD2
ASP
167
A
OD2
ASP
121
1
Y
1
A
OG1
THR
210
A
OG1
THR
164
1
Y
1
A
CG2
THR
210
A
CG2
THR
164
1
Y
1
A
GLY
47
A
GLY
1
1
Y
1
A
SER
48
A
SER
2
1
Y
1
A
HIS
49
A
HIS
3
1
Y
1
A
MET
50
A
MET
4
1
Y
1
A
HIS
51
A
HIS
5
1
Y
1
A
GLY
52
A
GLY
6
1
Y
1
A
GLN
53
A
GLN
7
1
Y
1
A
VAL
54
A
VAL
8
1
Y
1
A
ASP
55
A
ASP
9
1
Y
1
A
CYS
56
A
CYS
10
1
Y
1
A
ILE
141
A
ILE
95
1
Y
1
A
PRO
142
A
PRO
96
1
Y
1
A
TYR
143
A
TYR
97
1
Y
1
A
ASN
144
A
ASN
98
1
Y
1
A
PRO
145
A
PRO
99
1
Y
1
A
GLN
146
A
GLN
100
1
Y
1
A
SER
147
A
SER
101
1
Y
1
A
GLY
190
A
GLY
144
1
Y
1
A
ILE
191
A
ILE
145
1
Y
1
A
GLY
192
A
GLY
146
1
Y
1
A
LYS
211
A
LYS
165
1
Y
1
A
GLU
212
A
GLU
166
1
Y
1
A
A
C21
O
TTA
HOH
304
402
1.81
1
A
A
OE1
O
GLU
HOH
157
387
1.89
1
A
A
OD2
O
ASP
HOH
116
367
2.04
1
A
A
O
O
HOH
HOH
379
388
2.08
1
A
A
C22
O
TTA
HOH
304
402
2.15
1
A
LEU
63
10.64
B
1
A
SER
123
12.97
1
-3.66
0.60
121.00
117.34
A
A
A
CB
CG
CD2
TYR
TYR
TYR
83
83
83
N
1
13.60
2.20
113.40
127.00
A
A
A
CA
CB
CG
GLU
GLU
GLU
87
87
87
N
1
-5.83
0.60
121.00
115.17
A
A
A
CB
CG
CD1
TYR
TYR
TYR
99
99
99
N
1
-5.45
0.80
121.30
115.85
A
A
A
CG
CD1
CE1
TYR
TYR
TYR
99
99
99
N
1
-4.80
0.70
120.80
116.00
A
A
A
CB
CG
CD2
PHE
PHE
PHE
100
100
100
N
1
9.07
1.40
123.60
132.67
A
A
A
CD
NE
CZ
ARG
ARG
ARG
107
107
107
N
1
-3.65
0.50
120.30
116.65
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
107
107
107
N
1
9.84
1.60
122.70
132.54
A
A
A
O
C
N
PRO
PRO
VAL
109
109
110
Y
1
16.90
1.60
122.70
139.60
A
A
A
O
C
N
THR
THR
ASP
115
115
116
Y
1
5.81
0.90
118.30
124.11
A
A
A
CB
CG
OD1
ASP
ASP
ASP
116
116
116
N
1
-4.35
0.70
120.80
116.45
A
A
A
CB
CG
CD2
PHE
PHE
PHE
121
121
121
N
1
10.04
1.60
122.70
132.74
A
A
A
O
C
N
LYS
LYS
ALA
127
127
128
Y
1
-7.87
1.30
127.00
119.13
A
A
A
CB
CG
CD1
TRP
TRP
TRP
132
132
132
N
1
-4.56
0.50
120.30
115.74
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
166
166
166
N
1
-4.19
0.50
120.30
116.11
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
199
199
199
N
1
A
A
O
O
HOH
HOH
400
400
0.76
1_555
4_555
1
A
A
NZ
O
LYS
HOH
127
394
2.04
1_555
5_664
1
A
A
O
O
HOH
HOH
360
393
2.18
1_555
5_564
0.2630000
0.2210000
1.7
50
1600
32171
32171
same 5% from starting model for MR.
1
0
0
MOLECULAR REPLACEMENT
Default for refmac
1.7
50
98
1249
31
0
1120
26.7
1.7
50
1HYV
39564
39564
0
0
0.0310000
1
39
6.1
94.4
0.2350000
1.7
1.74
3.5
72.6
refinement
REFMAC
data reduction
DENZO
data scaling
SCALEPACK
HIV INTEGRASE CORE DOMAIN COMPLEXED WITH TETRAPHENYL ARSONIUM
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
Crystallographic 2-fold creates the biologically relevant dimer.
A
THR
93
A
THR
47
HELX_P
A
TRP
108
A
TRP
62
1
1
16
A
ASN
117
A
ASN
71
HELX_P
A
THR
122
A
THR
76
5
2
6
A
SER
123
A
SER
77
HELX_P
A
ALA
129
A
ALA
83
1
3
7
A
GLN
148
A
GLN
102
HELX_P
A
ARG
166
A
ARG
120
1
4
19
A
ASP
167
A
ASP
121
HELX_P
A
ALA
169
A
ALA
123
5
5
3
A
HIS
171
A
HIS
125
HELX_P
A
LYS
186
A
LYS
140
1
6
16
A
SER
195
A
SER
149
HELX_P
A
GLN
209
A
GLN
163
1
7
15
covale
1.354
both
A
ASP
64
A
C
ASP
18
1_555
A
CAF
65
A
N
CAF
19
1_555
covale
1.282
both
A
CAF
65
A
C
CAF
19
1_555
A
THR
66
A
N
THR
20
1_555
covale
1.375
both
A
ALA
129
A
C
ALA
83
1_555
A
CAF
130
A
N
CAF
84
1_555
covale
1.302
both
A
CAF
130
A
C
CAF
84
1_555
A
TRP
131
A
N
TRP
85
1_555
TRANSFERASE
DNA INTEGRATION, TRANSFERASE
Q76353_9HIV1
UNP
1
50
Q76353
MHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAA
CWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQ
TKE
50
212
1HYV
50
212
Q76353
A
1
4
166
1
SEE REMARK 999
GLY
47
1HYV
A
Q76353
UNP
1
1
SEE REMARK 999
SER
48
1HYV
A
Q76353
UNP
2
1
SEE REMARK 999
HIS
49
1HYV
A
Q76353
UNP
3
1
CYS
modified residue
CAF
65
1HYV
A
Q76353
UNP
65
19
1
CYS
modified residue
CAF
130
1HYV
A
Q76353
UNP
130
84
1
PHE
engineered mutation
LYS
185
1HYV
A
Q76353
UNP
185
139
5
anti-parallel
anti-parallel
parallel
parallel
A
ILE
84
A
ILE
38
A
ILE
89
A
ILE
43
A
LYS
71
A
LYS
25
A
HIS
78
A
HIS
32
A
ILE
60
A
ILE
14
A
LEU
68
A
LEU
22
A
THR
112
A
THR
66
A
HIS
114
A
HIS
68
A
LYS
136
A
LYS
90
A
GLN
137
A
GLN
91
BINDING SITE FOR RESIDUE SO4 A 302
A
SO4
302
Software
5
BINDING SITE FOR RESIDUE CL A 303
A
CL
303
Software
4
BINDING SITE FOR RESIDUE TTA A 304
A
TTA
304
Software
10
A
LYS
71
A
LYS
25
5
1_555
A
ARG
166
A
ARG
120
5
1_555
A
HIS
171
A
HIS
125
5
1_555
A
LEU
172
A
LEU
126
5
1_555
A
HOH
325
E
HOH
5
1_555
A
GLU
170
A
GLU
124
4
1_555
A
HIS
171
A
HIS
125
4
1_555
A
THR
174
A
THR
128
4
1_555
A
TTA
304
D
TTA
4
1_555
A
ALA
128
A
ALA
82
10
4_555
A
PHE
139
A
PHE
93
10
5_564
A
ASP
167
A
ASP
121
10
1_555
A
GLN
168
A
GLN
122
10
1_555
A
ALA
169
A
ALA
123
10
1_555
A
THR
174
A
THR
128
10
1_555
A
CL
303
C
CL
10
1_555
A
HOH
353
E
HOH
10
4_555
A
HOH
395
E
HOH
10
4_555
A
HOH
402
E
HOH
10
1_555
152
P 31 2 1