0.010283 0.000000 0.000000 0.000000 0.010283 0.000000 0.000000 0.000000 0.006687 0.00000 0.00000 0.00000 Teller, D.C. Okada, T. Behnke, C.A. Palczewski, K. Stenkamp, R.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 97.246 97.246 149.544 C2 H4 O 44.053 ACETYL GROUP non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C6 H12 O6 180.156 beta-D-mannopyranose D-saccharide, beta linking C15 H30 O6 306.395 n nonyl beta-D-glucopyranoside D-saccharide C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking Hg 2 200.590 MERCURY (II) ION non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C7 H16 O3 148.200 HEPTANE-1,2,3-TRIOL non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H12 O6 180.156 alpha-D-mannopyranose D-saccharide, alpha linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C16 H32 O2 256.424 PALMITIC ACID non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C20 H28 O 284.436 RETINAL non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer US Biochemistry BICHAW 0033 0006-2960 40 7761 7772 10.1021/bi0155091 11425302 Advances in determination of a high-resolution three-dimensional structure of rhodopsin, a model of G-protein-coupled receptors (GPCRs). 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 CCD 1999-12-12 SINGLE WAVELENGTH M x-ray 1 1.0332 1.0 19-ID APS 1.0332 SYNCHROTRON APS BEAMLINE 19-ID 39057.492 RHODOPSIN 2 nat polymer 586.542 alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 424.401 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 2 man branched 748.682 beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 306.395 nonyl beta-D-glucopyranoside 7 man non-polymer 200.590 MERCURY (II) ION 6 syn non-polymer 65.409 ZINC ION 7 syn non-polymer 256.424 PALMITIC ACID 3 syn non-polymer 284.436 RETINAL 2 syn non-polymer 148.200 HEPTANE-1,2,3-TRIOL 6 syn non-polymer 18.015 water 12 nat water no yes (ACE)MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYI LLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIM GVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAA QQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRN CMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA XMNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNL AVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF TWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQE SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVT TLCCGKNPLGDDEASTTVSKTETSQVAPA A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n cattle Bos sample 9913 Bos taurus 1 4.10 70.0 6.00 MES, 2-MERCAPTOETHANOL, ZINC ACETATE, HEPTANETRIOL, NONYL-GLUCOSIDE, AMMONIUM SULFATE ARE IN THE HANGING DROPS. MERCURY ACETATE, pH 6.00 atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_struct_conn_angle struct_asym struct_conn struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Version format compliance Derived calculations Version format compliance Atomic model Data collection Derived calculations Structure summary 1 0 2001-07-04 1 1 2008-04-27 1 2 2011-07-13 2 0 2020-07-29 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.occupancy _atom_site.type_symbol _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.type _entity.formula_weight _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_conn_angle.ptnr2_label_asym_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id C NAG 505 n C NAG 1 C NAG 504 n C NAG 2 C MAN 503 n C MAN 3 E NAG 705 n D NAG 1 E NAG 704 n D NAG 2 D NAG 605 n E NAG 1 D NAG 604 n E NAG 2 D MAN 603 n E BMA 3 D MAN 602 n E BMA 4 F NAG 805 n F NAG 1 F NAG 804 n F NAG 2 DManpb b-D-mannopyranose b-D-Manp Man b-nonylglucoside DManpa a-D-mannopyranose a-D-Manp Man DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc RCSB Y RCSB 2001-01-26 REL oligosaccharide oligosaccharide oligosaccharide DManpa1-4DGlcpNAcb1-4DGlcpNAcb1- 2 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5]/1-1-2/a4-b1_b4-c1 2 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}}} 2 PDB-CARE LINUCS DGlcpNAcb1-4DGlcpNAcb1- 3 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1 3 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}} 3 PDB-CARE LINUCS DManpb1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 4 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/2,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2-2/a4-b1_b4-c1_c3-d1 4 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][b-D-Manp]{}}}}} 4 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 2 O1 HO4 sing C1 O4 MAN NAG 3 2 2 O1 HO4 sing C1 O4 NAG NAG 2 1 3 O1 HO4 sing C1 O4 NAG NAG 2 1 4 O1 HO4 sing C1 O4 BMA NAG 3 2 4 O1 HO4 sing C1 O3 BMA BMA 4 3 4 O1 HO3 sing n n n n n n n n n BNG nonyl beta-D-glucopyranoside HG MERCURY (II) ION ZN ZINC ION PLM PALMITIC ACID RET RETINAL HTO HEPTANE-1,2,3-TRIOL HOH water BNG 1500 5 BNG BNG 1500 A BNG 1501 5 BNG BNG 1501 A BNG 1503 5 BNG BNG 1503 A BNG 1504 5 BNG BNG 1504 A BNG 1505 5 BNG BNG 1505 A HG 901 6 HG HG 901 A HG 903 6 HG HG 903 A HG 905 6 HG HG 905 A ZN 957 7 ZN ZN 957 A ZN 959 7 ZN ZN 959 A ZN 962 7 ZN ZN 962 A ZN 964 7 ZN ZN 964 A PLY 1322 8 PLM PLM 1322 A PLY 1323 8 PLM PLM 1323 A RET 1296 9 RET RET 1296 A HTO 1400 10 HTO HTO 1400 A HTO 1403 10 HTO HTO 1403 A HTO 1404 10 HTO HTO 1404 A HTO 1405 10 HTO HTO 1405 A BNG 1502 5 BNG BNG 1502 B BNG 1506 5 BNG BNG 1506 B HG 902 6 HG HG 902 B HG 904 6 HG HG 904 B HG 906 6 HG HG 906 B ZN 956 7 ZN ZN 956 B ZN 958 7 ZN ZN 958 B ZN 963 7 ZN ZN 963 B PLY 1322 8 PLM PLM 1322 B RET 1296 9 RET RET 1296 B HTO 1401 10 HTO HTO 1401 B HTO 1406 10 HTO HTO 1406 B HOH 2000 11 HOH HOH 2000 A HOH 2002 11 HOH HOH 2002 A HOH 2004 11 HOH HOH 2004 A HOH 2007 11 HOH HOH 2007 A HOH 2010 11 HOH HOH 2010 A HOH 2011 11 HOH HOH 2011 A HOH 2014 11 HOH HOH 2014 A HOH 2005 11 HOH HOH 2005 B HOH 2008 11 HOH HOH 2008 B HOH 2009 11 HOH HOH 2009 B HOH 2012 11 HOH HOH 2012 B HOH 2013 11 HOH HOH 2013 B ACE 0 n 1 ACE 0 A MET 1 n 2 MET 1 A ASN 2 n 3 ASN 2 A GLY 3 n 4 GLY 3 A THR 4 n 5 THR 4 A GLU 5 n 6 GLU 5 A GLY 6 n 7 GLY 6 A PRO 7 n 8 PRO 7 A ASN 8 n 9 ASN 8 A PHE 9 n 10 PHE 9 A TYR 10 n 11 TYR 10 A VAL 11 n 12 VAL 11 A PRO 12 n 13 PRO 12 A PHE 13 n 14 PHE 13 A SER 14 n 15 SER 14 A ASN 15 n 16 ASN 15 A LYS 16 n 17 LYS 16 A THR 17 n 18 THR 17 A GLY 18 n 19 GLY 18 A VAL 19 n 20 VAL 19 A VAL 20 n 21 VAL 20 A ARG 21 n 22 ARG 21 A SER 22 n 23 SER 22 A PRO 23 n 24 PRO 23 A PHE 24 n 25 PHE 24 A GLU 25 n 26 GLU 25 A ALA 26 n 27 ALA 26 A PRO 27 n 28 PRO 27 A GLN 28 n 29 GLN 28 A TYR 29 n 30 TYR 29 A TYR 30 n 31 TYR 30 A LEU 31 n 32 LEU 31 A ALA 32 n 33 ALA 32 A GLU 33 n 34 GLU 33 A PRO 34 n 35 PRO 34 A TRP 35 n 36 TRP 35 A GLN 36 n 37 GLN 36 A PHE 37 n 38 PHE 37 A SER 38 n 39 SER 38 A MET 39 n 40 MET 39 A LEU 40 n 41 LEU 40 A ALA 41 n 42 ALA 41 A ALA 42 n 43 ALA 42 A TYR 43 n 44 TYR 43 A MET 44 n 45 MET 44 A PHE 45 n 46 PHE 45 A LEU 46 n 47 LEU 46 A LEU 47 n 48 LEU 47 A ILE 48 n 49 ILE 48 A MET 49 n 50 MET 49 A LEU 50 n 51 LEU 50 A GLY 51 n 52 GLY 51 A PHE 52 n 53 PHE 52 A PRO 53 n 54 PRO 53 A ILE 54 n 55 ILE 54 A ASN 55 n 56 ASN 55 A PHE 56 n 57 PHE 56 A LEU 57 n 58 LEU 57 A THR 58 n 59 THR 58 A LEU 59 n 60 LEU 59 A TYR 60 n 61 TYR 60 A VAL 61 n 62 VAL 61 A THR 62 n 63 THR 62 A VAL 63 n 64 VAL 63 A GLN 64 n 65 GLN 64 A HIS 65 n 66 HIS 65 A LYS 66 n 67 LYS 66 A LYS 67 n 68 LYS 67 A LEU 68 n 69 LEU 68 A ARG 69 n 70 ARG 69 A THR 70 n 71 THR 70 A PRO 71 n 72 PRO 71 A LEU 72 n 73 LEU 72 A ASN 73 n 74 ASN 73 A TYR 74 n 75 TYR 74 A ILE 75 n 76 ILE 75 A LEU 76 n 77 LEU 76 A LEU 77 n 78 LEU 77 A ASN 78 n 79 ASN 78 A LEU 79 n 80 LEU 79 A ALA 80 n 81 ALA 80 A VAL 81 n 82 VAL 81 A ALA 82 n 83 ALA 82 A ASP 83 n 84 ASP 83 A LEU 84 n 85 LEU 84 A PHE 85 n 86 PHE 85 A MET 86 n 87 MET 86 A VAL 87 n 88 VAL 87 A PHE 88 n 89 PHE 88 A GLY 89 n 90 GLY 89 A GLY 90 n 91 GLY 90 A PHE 91 n 92 PHE 91 A THR 92 n 93 THR 92 A THR 93 n 94 THR 93 A THR 94 n 95 THR 94 A LEU 95 n 96 LEU 95 A TYR 96 n 97 TYR 96 A THR 97 n 98 THR 97 A SER 98 n 99 SER 98 A LEU 99 n 100 LEU 99 A HIS 100 n 101 HIS 100 A GLY 101 n 102 GLY 101 A TYR 102 n 103 TYR 102 A PHE 103 n 104 PHE 103 A VAL 104 n 105 VAL 104 A PHE 105 n 106 PHE 105 A GLY 106 n 107 GLY 106 A PRO 107 n 108 PRO 107 A THR 108 n 109 THR 108 A GLY 109 n 110 GLY 109 A CYS 110 n 111 CYS 110 A ASN 111 n 112 ASN 111 A LEU 112 n 113 LEU 112 A GLU 113 n 114 GLU 113 A GLY 114 n 115 GLY 114 A PHE 115 n 116 PHE 115 A PHE 116 n 117 PHE 116 A ALA 117 n 118 ALA 117 A THR 118 n 119 THR 118 A LEU 119 n 120 LEU 119 A GLY 120 n 121 GLY 120 A GLY 121 n 122 GLY 121 A GLU 122 n 123 GLU 122 A ILE 123 n 124 ILE 123 A ALA 124 n 125 ALA 124 A LEU 125 n 126 LEU 125 A TRP 126 n 127 TRP 126 A SER 127 n 128 SER 127 A LEU 128 n 129 LEU 128 A VAL 129 n 130 VAL 129 A VAL 130 n 131 VAL 130 A LEU 131 n 132 LEU 131 A ALA 132 n 133 ALA 132 A ILE 133 n 134 ILE 133 A GLU 134 n 135 GLU 134 A ARG 135 n 136 ARG 135 A TYR 136 n 137 TYR 136 A VAL 137 n 138 VAL 137 A VAL 138 n 139 VAL 138 A VAL 139 n 140 VAL 139 A CYS 140 n 141 CYS 140 A LYS 141 n 142 LYS 141 A PRO 142 n 143 PRO 142 A MET 143 n 144 MET 143 A SER 144 n 145 SER 144 A ASN 145 n 146 ASN 145 A PHE 146 n 147 PHE 146 A ARG 147 n 148 ARG 147 A PHE 148 n 149 PHE 148 A GLY 149 n 150 GLY 149 A GLU 150 n 151 GLU 150 A ASN 151 n 152 ASN 151 A HIS 152 n 153 HIS 152 A ALA 153 n 154 ALA 153 A ILE 154 n 155 ILE 154 A MET 155 n 156 MET 155 A GLY 156 n 157 GLY 156 A VAL 157 n 158 VAL 157 A ALA 158 n 159 ALA 158 A PHE 159 n 160 PHE 159 A THR 160 n 161 THR 160 A TRP 161 n 162 TRP 161 A VAL 162 n 163 VAL 162 A MET 163 n 164 MET 163 A ALA 164 n 165 ALA 164 A LEU 165 n 166 LEU 165 A ALA 166 n 167 ALA 166 A CYS 167 n 168 CYS 167 A ALA 168 n 169 ALA 168 A ALA 169 n 170 ALA 169 A PRO 170 n 171 PRO 170 A PRO 171 n 172 PRO 171 A LEU 172 n 173 LEU 172 A VAL 173 n 174 VAL 173 A GLY 174 n 175 GLY 174 A TRP 175 n 176 TRP 175 A SER 176 n 177 SER 176 A ARG 177 n 178 ARG 177 A TYR 178 n 179 TYR 178 A ILE 179 n 180 ILE 179 A PRO 180 n 181 PRO 180 A GLU 181 n 182 GLU 181 A GLY 182 n 183 GLY 182 A MET 183 n 184 MET 183 A GLN 184 n 185 GLN 184 A CYS 185 n 186 CYS 185 A SER 186 n 187 SER 186 A CYS 187 n 188 CYS 187 A GLY 188 n 189 GLY 188 A ILE 189 n 190 ILE 189 A ASP 190 n 191 ASP 190 A TYR 191 n 192 TYR 191 A TYR 192 n 193 TYR 192 A THR 193 n 194 THR 193 A PRO 194 n 195 PRO 194 A HIS 195 n 196 HIS 195 A GLU 196 n 197 GLU 196 A GLU 197 n 198 GLU 197 A THR 198 n 199 THR 198 A ASN 199 n 200 ASN 199 A ASN 200 n 201 ASN 200 A GLU 201 n 202 GLU 201 A SER 202 n 203 SER 202 A PHE 203 n 204 PHE 203 A VAL 204 n 205 VAL 204 A ILE 205 n 206 ILE 205 A TYR 206 n 207 TYR 206 A MET 207 n 208 MET 207 A PHE 208 n 209 PHE 208 A VAL 209 n 210 VAL 209 A VAL 210 n 211 VAL 210 A HIS 211 n 212 HIS 211 A PHE 212 n 213 PHE 212 A ILE 213 n 214 ILE 213 A ILE 214 n 215 ILE 214 A PRO 215 n 216 PRO 215 A LEU 216 n 217 LEU 216 A ILE 217 n 218 ILE 217 A VAL 218 n 219 VAL 218 A ILE 219 n 220 ILE 219 A PHE 220 n 221 PHE 220 A PHE 221 n 222 PHE 221 A CYS 222 n 223 CYS 222 A TYR 223 n 224 TYR 223 A GLY 224 n 225 GLY 224 A GLN 225 n 226 GLN 225 A LEU 226 n 227 LEU 226 A VAL 227 n 228 VAL 227 A PHE 228 n 229 PHE 228 A THR 229 n 230 THR 229 A VAL 230 n 231 VAL 230 A LYS 231 n 232 LYS 231 A GLU 232 n 233 GLU 232 A ALA 233 n 234 ALA 233 A ALA 234 n 235 ALA 234 A ALA 235 n 236 ALA 235 A n 237 236 A n 238 237 A n 239 238 A n 240 239 A n 241 240 A ALA 241 n 242 ALA 241 A THR 242 n 243 THR 242 A THR 243 n 244 THR 243 A GLN 244 n 245 GLN 244 A LYS 245 n 246 LYS 245 A ALA 246 n 247 ALA 246 A GLU 247 n 248 GLU 247 A LYS 248 n 249 LYS 248 A GLU 249 n 250 GLU 249 A VAL 250 n 251 VAL 250 A THR 251 n 252 THR 251 A ARG 252 n 253 ARG 252 A MET 253 n 254 MET 253 A VAL 254 n 255 VAL 254 A ILE 255 n 256 ILE 255 A ILE 256 n 257 ILE 256 A MET 257 n 258 MET 257 A VAL 258 n 259 VAL 258 A ILE 259 n 260 ILE 259 A ALA 260 n 261 ALA 260 A PHE 261 n 262 PHE 261 A LEU 262 n 263 LEU 262 A ILE 263 n 264 ILE 263 A CYS 264 n 265 CYS 264 A TRP 265 n 266 TRP 265 A LEU 266 n 267 LEU 266 A PRO 267 n 268 PRO 267 A TYR 268 n 269 TYR 268 A ALA 269 n 270 ALA 269 A GLY 270 n 271 GLY 270 A VAL 271 n 272 VAL 271 A ALA 272 n 273 ALA 272 A PHE 273 n 274 PHE 273 A TYR 274 n 275 TYR 274 A ILE 275 n 276 ILE 275 A PHE 276 n 277 PHE 276 A THR 277 n 278 THR 277 A HIS 278 n 279 HIS 278 A GLN 279 n 280 GLN 279 A GLY 280 n 281 GLY 280 A SER 281 n 282 SER 281 A ASP 282 n 283 ASP 282 A PHE 283 n 284 PHE 283 A GLY 284 n 285 GLY 284 A PRO 285 n 286 PRO 285 A ILE 286 n 287 ILE 286 A PHE 287 n 288 PHE 287 A MET 288 n 289 MET 288 A THR 289 n 290 THR 289 A ILE 290 n 291 ILE 290 A PRO 291 n 292 PRO 291 A ALA 292 n 293 ALA 292 A PHE 293 n 294 PHE 293 A PHE 294 n 295 PHE 294 A ALA 295 n 296 ALA 295 A LYS 296 n 297 LYS 296 A THR 297 n 298 THR 297 A SER 298 n 299 SER 298 A ALA 299 n 300 ALA 299 A VAL 300 n 301 VAL 300 A TYR 301 n 302 TYR 301 A ASN 302 n 303 ASN 302 A PRO 303 n 304 PRO 303 A VAL 304 n 305 VAL 304 A ILE 305 n 306 ILE 305 A TYR 306 n 307 TYR 306 A ILE 307 n 308 ILE 307 A MET 308 n 309 MET 308 A MET 309 n 310 MET 309 A ASN 310 n 311 ASN 310 A LYS 311 n 312 LYS 311 A GLN 312 n 313 GLN 312 A PHE 313 n 314 PHE 313 A ARG 314 n 315 ARG 314 A ASN 315 n 316 ASN 315 A CYS 316 n 317 CYS 316 A MET 317 n 318 MET 317 A VAL 318 n 319 VAL 318 A THR 319 n 320 THR 319 A THR 320 n 321 THR 320 A LEU 321 n 322 LEU 321 A CYS 322 n 323 CYS 322 A CYS 323 n 324 CYS 323 A GLY 324 n 325 GLY 324 A LYS 325 n 326 LYS 325 A ASN 326 n 327 ASN 326 A PRO 327 n 328 PRO 327 A LEU 328 n 329 LEU 328 A GLY 329 n 330 GLY 329 A ASP 330 n 331 ASP 330 A n 332 331 A n 333 332 A n 334 333 A SER 334 n 335 SER 334 A THR 335 n 336 THR 335 A THR 336 n 337 THR 336 A VAL 337 n 338 VAL 337 A SER 338 n 339 SER 338 A LYS 339 n 340 LYS 339 A THR 340 n 341 THR 340 A GLU 341 n 342 GLU 341 A THR 342 n 343 THR 342 A SER 343 n 344 SER 343 A GLN 344 n 345 GLN 344 A VAL 345 n 346 VAL 345 A ALA 346 n 347 ALA 346 A PRO 347 n 348 PRO 347 A ALA 348 n 349 ALA 348 A ACE 0 n 1 ACE 0 B MET 1 n 2 MET 1 B ASN 2 n 3 ASN 2 B GLY 3 n 4 GLY 3 B THR 4 n 5 THR 4 B GLU 5 n 6 GLU 5 B GLY 6 n 7 GLY 6 B PRO 7 n 8 PRO 7 B ASN 8 n 9 ASN 8 B PHE 9 n 10 PHE 9 B TYR 10 n 11 TYR 10 B VAL 11 n 12 VAL 11 B PRO 12 n 13 PRO 12 B PHE 13 n 14 PHE 13 B SER 14 n 15 SER 14 B ASN 15 n 16 ASN 15 B LYS 16 n 17 LYS 16 B THR 17 n 18 THR 17 B GLY 18 n 19 GLY 18 B VAL 19 n 20 VAL 19 B VAL 20 n 21 VAL 20 B ARG 21 n 22 ARG 21 B SER 22 n 23 SER 22 B PRO 23 n 24 PRO 23 B PHE 24 n 25 PHE 24 B GLU 25 n 26 GLU 25 B ALA 26 n 27 ALA 26 B PRO 27 n 28 PRO 27 B GLN 28 n 29 GLN 28 B TYR 29 n 30 TYR 29 B TYR 30 n 31 TYR 30 B LEU 31 n 32 LEU 31 B ALA 32 n 33 ALA 32 B GLU 33 n 34 GLU 33 B PRO 34 n 35 PRO 34 B TRP 35 n 36 TRP 35 B GLN 36 n 37 GLN 36 B PHE 37 n 38 PHE 37 B SER 38 n 39 SER 38 B MET 39 n 40 MET 39 B LEU 40 n 41 LEU 40 B ALA 41 n 42 ALA 41 B ALA 42 n 43 ALA 42 B TYR 43 n 44 TYR 43 B MET 44 n 45 MET 44 B PHE 45 n 46 PHE 45 B LEU 46 n 47 LEU 46 B LEU 47 n 48 LEU 47 B ILE 48 n 49 ILE 48 B MET 49 n 50 MET 49 B LEU 50 n 51 LEU 50 B GLY 51 n 52 GLY 51 B PHE 52 n 53 PHE 52 B PRO 53 n 54 PRO 53 B ILE 54 n 55 ILE 54 B ASN 55 n 56 ASN 55 B PHE 56 n 57 PHE 56 B LEU 57 n 58 LEU 57 B THR 58 n 59 THR 58 B LEU 59 n 60 LEU 59 B TYR 60 n 61 TYR 60 B VAL 61 n 62 VAL 61 B THR 62 n 63 THR 62 B VAL 63 n 64 VAL 63 B GLN 64 n 65 GLN 64 B HIS 65 n 66 HIS 65 B LYS 66 n 67 LYS 66 B LYS 67 n 68 LYS 67 B LEU 68 n 69 LEU 68 B ARG 69 n 70 ARG 69 B THR 70 n 71 THR 70 B PRO 71 n 72 PRO 71 B LEU 72 n 73 LEU 72 B ASN 73 n 74 ASN 73 B TYR 74 n 75 TYR 74 B ILE 75 n 76 ILE 75 B LEU 76 n 77 LEU 76 B LEU 77 n 78 LEU 77 B ASN 78 n 79 ASN 78 B LEU 79 n 80 LEU 79 B ALA 80 n 81 ALA 80 B VAL 81 n 82 VAL 81 B ALA 82 n 83 ALA 82 B ASP 83 n 84 ASP 83 B LEU 84 n 85 LEU 84 B PHE 85 n 86 PHE 85 B MET 86 n 87 MET 86 B VAL 87 n 88 VAL 87 B PHE 88 n 89 PHE 88 B GLY 89 n 90 GLY 89 B GLY 90 n 91 GLY 90 B PHE 91 n 92 PHE 91 B THR 92 n 93 THR 92 B THR 93 n 94 THR 93 B THR 94 n 95 THR 94 B LEU 95 n 96 LEU 95 B TYR 96 n 97 TYR 96 B THR 97 n 98 THR 97 B SER 98 n 99 SER 98 B LEU 99 n 100 LEU 99 B HIS 100 n 101 HIS 100 B GLY 101 n 102 GLY 101 B TYR 102 n 103 TYR 102 B PHE 103 n 104 PHE 103 B VAL 104 n 105 VAL 104 B PHE 105 n 106 PHE 105 B GLY 106 n 107 GLY 106 B PRO 107 n 108 PRO 107 B THR 108 n 109 THR 108 B GLY 109 n 110 GLY 109 B CYS 110 n 111 CYS 110 B ASN 111 n 112 ASN 111 B LEU 112 n 113 LEU 112 B GLU 113 n 114 GLU 113 B GLY 114 n 115 GLY 114 B PHE 115 n 116 PHE 115 B PHE 116 n 117 PHE 116 B ALA 117 n 118 ALA 117 B THR 118 n 119 THR 118 B LEU 119 n 120 LEU 119 B GLY 120 n 121 GLY 120 B GLY 121 n 122 GLY 121 B GLU 122 n 123 GLU 122 B ILE 123 n 124 ILE 123 B ALA 124 n 125 ALA 124 B LEU 125 n 126 LEU 125 B TRP 126 n 127 TRP 126 B SER 127 n 128 SER 127 B LEU 128 n 129 LEU 128 B VAL 129 n 130 VAL 129 B VAL 130 n 131 VAL 130 B LEU 131 n 132 LEU 131 B ALA 132 n 133 ALA 132 B ILE 133 n 134 ILE 133 B GLU 134 n 135 GLU 134 B ARG 135 n 136 ARG 135 B TYR 136 n 137 TYR 136 B VAL 137 n 138 VAL 137 B VAL 138 n 139 VAL 138 B VAL 139 n 140 VAL 139 B CYS 140 n 141 CYS 140 B n 142 141 B n 143 142 B n 144 143 B n 145 144 B n 146 145 B n 147 146 B n 148 147 B n 149 148 B GLY 149 n 150 GLY 149 B GLU 150 n 151 GLU 150 B ASN 151 n 152 ASN 151 B HIS 152 n 153 HIS 152 B ALA 153 n 154 ALA 153 B ILE 154 n 155 ILE 154 B MET 155 n 156 MET 155 B GLY 156 n 157 GLY 156 B VAL 157 n 158 VAL 157 B ALA 158 n 159 ALA 158 B PHE 159 n 160 PHE 159 B THR 160 n 161 THR 160 B TRP 161 n 162 TRP 161 B VAL 162 n 163 VAL 162 B MET 163 n 164 MET 163 B ALA 164 n 165 ALA 164 B LEU 165 n 166 LEU 165 B ALA 166 n 167 ALA 166 B CYS 167 n 168 CYS 167 B ALA 168 n 169 ALA 168 B ALA 169 n 170 ALA 169 B PRO 170 n 171 PRO 170 B PRO 171 n 172 PRO 171 B LEU 172 n 173 LEU 172 B VAL 173 n 174 VAL 173 B GLY 174 n 175 GLY 174 B TRP 175 n 176 TRP 175 B SER 176 n 177 SER 176 B ARG 177 n 178 ARG 177 B TYR 178 n 179 TYR 178 B ILE 179 n 180 ILE 179 B PRO 180 n 181 PRO 180 B GLU 181 n 182 GLU 181 B GLY 182 n 183 GLY 182 B MET 183 n 184 MET 183 B GLN 184 n 185 GLN 184 B CYS 185 n 186 CYS 185 B SER 186 n 187 SER 186 B CYS 187 n 188 CYS 187 B GLY 188 n 189 GLY 188 B ILE 189 n 190 ILE 189 B ASP 190 n 191 ASP 190 B TYR 191 n 192 TYR 191 B TYR 192 n 193 TYR 192 B THR 193 n 194 THR 193 B PRO 194 n 195 PRO 194 B HIS 195 n 196 HIS 195 B GLU 196 n 197 GLU 196 B GLU 197 n 198 GLU 197 B THR 198 n 199 THR 198 B ASN 199 n 200 ASN 199 B ASN 200 n 201 ASN 200 B GLU 201 n 202 GLU 201 B SER 202 n 203 SER 202 B PHE 203 n 204 PHE 203 B VAL 204 n 205 VAL 204 B ILE 205 n 206 ILE 205 B TYR 206 n 207 TYR 206 B MET 207 n 208 MET 207 B PHE 208 n 209 PHE 208 B VAL 209 n 210 VAL 209 B VAL 210 n 211 VAL 210 B HIS 211 n 212 HIS 211 B PHE 212 n 213 PHE 212 B ILE 213 n 214 ILE 213 B ILE 214 n 215 ILE 214 B PRO 215 n 216 PRO 215 B LEU 216 n 217 LEU 216 B ILE 217 n 218 ILE 217 B VAL 218 n 219 VAL 218 B ILE 219 n 220 ILE 219 B PHE 220 n 221 PHE 220 B PHE 221 n 222 PHE 221 B CYS 222 n 223 CYS 222 B TYR 223 n 224 TYR 223 B GLY 224 n 225 GLY 224 B GLN 225 n 226 GLN 225 B LEU 226 n 227 LEU 226 B n 228 227 B n 229 228 B n 230 229 B n 231 230 B n 232 231 B n 233 232 B n 234 233 B n 235 234 B n 236 235 B n 237 236 B n 238 237 B n 239 238 B n 240 239 B n 241 240 B n 242 241 B n 243 242 B n 244 243 B GLN 244 n 245 GLN 244 B LYS 245 n 246 LYS 245 B ALA 246 n 247 ALA 246 B GLU 247 n 248 GLU 247 B LYS 248 n 249 LYS 248 B GLU 249 n 250 GLU 249 B VAL 250 n 251 VAL 250 B THR 251 n 252 THR 251 B ARG 252 n 253 ARG 252 B MET 253 n 254 MET 253 B VAL 254 n 255 VAL 254 B ILE 255 n 256 ILE 255 B ILE 256 n 257 ILE 256 B MET 257 n 258 MET 257 B VAL 258 n 259 VAL 258 B ILE 259 n 260 ILE 259 B ALA 260 n 261 ALA 260 B PHE 261 n 262 PHE 261 B LEU 262 n 263 LEU 262 B ILE 263 n 264 ILE 263 B CYS 264 n 265 CYS 264 B TRP 265 n 266 TRP 265 B LEU 266 n 267 LEU 266 B PRO 267 n 268 PRO 267 B TYR 268 n 269 TYR 268 B ALA 269 n 270 ALA 269 B GLY 270 n 271 GLY 270 B VAL 271 n 272 VAL 271 B ALA 272 n 273 ALA 272 B PHE 273 n 274 PHE 273 B TYR 274 n 275 TYR 274 B ILE 275 n 276 ILE 275 B PHE 276 n 277 PHE 276 B THR 277 n 278 THR 277 B HIS 278 n 279 HIS 278 B GLN 279 n 280 GLN 279 B GLY 280 n 281 GLY 280 B SER 281 n 282 SER 281 B ASP 282 n 283 ASP 282 B PHE 283 n 284 PHE 283 B GLY 284 n 285 GLY 284 B PRO 285 n 286 PRO 285 B ILE 286 n 287 ILE 286 B PHE 287 n 288 PHE 287 B MET 288 n 289 MET 288 B THR 289 n 290 THR 289 B ILE 290 n 291 ILE 290 B PRO 291 n 292 PRO 291 B ALA 292 n 293 ALA 292 B PHE 293 n 294 PHE 293 B PHE 294 n 295 PHE 294 B ALA 295 n 296 ALA 295 B LYS 296 n 297 LYS 296 B THR 297 n 298 THR 297 B SER 298 n 299 SER 298 B ALA 299 n 300 ALA 299 B VAL 300 n 301 VAL 300 B TYR 301 n 302 TYR 301 B ASN 302 n 303 ASN 302 B PRO 303 n 304 PRO 303 B VAL 304 n 305 VAL 304 B ILE 305 n 306 ILE 305 B TYR 306 n 307 TYR 306 B ILE 307 n 308 ILE 307 B MET 308 n 309 MET 308 B MET 309 n 310 MET 309 B ASN 310 n 311 ASN 310 B LYS 311 n 312 LYS 311 B GLN 312 n 313 GLN 312 B PHE 313 n 314 PHE 313 B ARG 314 n 315 ARG 314 B ASN 315 n 316 ASN 315 B CYS 316 n 317 CYS 316 B MET 317 n 318 MET 317 B VAL 318 n 319 VAL 318 B THR 319 n 320 THR 319 B THR 320 n 321 THR 320 B LEU 321 n 322 LEU 321 B CYS 322 n 323 CYS 322 B CYS 323 n 324 CYS 323 B GLY 324 n 325 GLY 324 B LYS 325 n 326 LYS 325 B ASN 326 n 327 ASN 326 B n 328 327 B n 329 328 B n 330 329 B n 331 330 B n 332 331 B n 333 332 B n 334 333 B n 335 334 B n 336 335 B n 337 336 B n 338 337 B n 339 338 B n 340 339 B n 341 340 B n 342 341 B n 343 342 B n 344 343 B n 345 344 B n 346 345 B n 347 346 B n 348 347 B n 349 348 B author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric software_defined_assembly PISA 2 dimeric software_defined_assembly PISA,PQS 2 dimeric 12540 -236 30870 15060 -228 28350 A GLU 201 A OE2 GLU 202 1_555 A ZN 957 O ZN ZN 1_555 A GLN 279 A NE2 GLN 280 1_555 133.6 A ASN 15 GLYCOSYLATION SITE A ASN 16 ASN B ASN 2 GLYCOSYLATION SITE B ASN 3 ASN A ASN 2 GLYCOSYLATION SITE A ASN 3 ASN B ASN 15 GLYCOSYLATION SITE B ASN 16 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_654 -x+1,-y,z-1/2 crystal symmetry operation 97.2460000000 0.0000000000 -74.7720000000 A O THR 4 A O THR 5 A N VAL 11 A N VAL 12 A N GLU 181 A N GLU 182 A O SER 186 A O SER 187 B O THR 4 B O THR 5 B N VAL 11 B N VAL 12 B N ILE 179 B N ILE 180 B O GLY 188 B O GLY 189 1 A GLN 236 A GLN 237 1 Y 1 A GLN 237 A GLN 238 1 Y 1 A GLN 238 A GLN 239 1 Y 1 A GLU 239 A GLU 240 1 Y 1 A SER 240 A SER 241 1 Y 1 A ASP 331 A ASP 332 1 Y 1 A GLU 332 A GLU 333 1 Y 1 A ALA 333 A ALA 334 1 Y 1 B LYS 141 B LYS 142 1 Y 1 B PRO 142 B PRO 143 1 Y 1 B MET 143 B MET 144 1 Y 1 B SER 144 B SER 145 1 Y 1 B ASN 145 B ASN 146 1 Y 1 B PHE 146 B PHE 147 1 Y 1 B ARG 147 B ARG 148 1 Y 1 B PHE 148 B PHE 149 1 Y 1 B VAL 227 B VAL 228 1 Y 1 B PHE 228 B PHE 229 1 Y 1 B THR 229 B THR 230 1 Y 1 B VAL 230 B VAL 231 1 Y 1 B LYS 231 B LYS 232 1 Y 1 B GLU 232 B GLU 233 1 Y 1 B ALA 233 B ALA 234 1 Y 1 B ALA 234 B ALA 235 1 Y 1 B ALA 235 B ALA 236 1 Y 1 B GLN 236 B GLN 237 1 Y 1 B GLN 237 B GLN 238 1 Y 1 B GLN 238 B GLN 239 1 Y 1 B GLU 239 B GLU 240 1 Y 1 B SER 240 B SER 241 1 Y 1 B ALA 241 B ALA 242 1 Y 1 B THR 242 B THR 243 1 Y 1 B THR 243 B THR 244 1 Y 1 B PRO 327 B PRO 328 1 Y 1 B LEU 328 B LEU 329 1 Y 1 B GLY 329 B GLY 330 1 Y 1 B ASP 330 B ASP 331 1 Y 1 B ASP 331 B ASP 332 1 Y 1 B GLU 332 B GLU 333 1 Y 1 B ALA 333 B ALA 334 1 Y 1 B SER 334 B SER 335 1 Y 1 B THR 335 B THR 336 1 Y 1 B THR 336 B THR 337 1 Y 1 B VAL 337 B VAL 338 1 Y 1 B SER 338 B SER 339 1 Y 1 B LYS 339 B LYS 340 1 Y 1 B THR 340 B THR 341 1 Y 1 B GLU 341 B GLU 342 1 Y 1 B THR 342 B THR 343 1 Y 1 B SER 343 B SER 344 1 Y 1 B GLN 344 B GLN 345 1 Y 1 B VAL 345 B VAL 346 1 Y 1 B ALA 346 B ALA 347 1 Y 1 B PRO 347 B PRO 348 1 Y 1 B ALA 348 B ALA 349 1 Y 1 B B NE2 ZN GLN ZN 279 958 1.62 1 3.30 0.50 120.30 123.60 A A A NE CZ NH2 ARG ARG ARG 177 177 177 N 1 3.13 0.50 120.30 123.43 B B B NE CZ NH2 ARG ARG ARG 177 177 177 N 1 A B OE2 ZN GLU ZN 196 958 1.56 1_555 2_654 1 A ASN 8 -141.60 -17.24 1 A TYR 10 -169.52 90.70 1 A PRO 12 -70.42 41.26 1 A ASN 15 -99.80 42.49 1 A TYR 29 -63.31 6.11 1 A LEU 68 -65.88 74.48 1 A LYS 141 23.25 67.34 1 A ARG 147 -177.10 112.69 1 A PHE 148 -48.11 154.94 1 A SER 176 68.84 -175.09 1 A HIS 195 29.07 83.04 1 A GLU 197 -59.52 1.51 1 A THR 198 -140.01 -10.41 1 A PHE 212 -160.26 -63.68 1 A PHE 228 -120.95 -54.85 1 A VAL 230 -112.45 67.84 1 A GLU 232 -175.68 -50.07 1 A ALA 233 -54.67 -168.01 1 A ALA 234 177.62 168.48 1 A HIS 278 -150.34 43.96 1 A SER 281 -69.92 -177.54 1 A LYS 296 -63.19 1.24 1 A VAL 300 -144.35 -30.75 1 A CYS 323 49.38 6.83 1 A LYS 325 -165.58 -145.14 1 A LEU 328 13.61 28.38 1 A VAL 337 177.52 129.40 1 A SER 338 -168.89 -139.97 1 A LYS 339 -122.42 -82.77 1 A GLU 341 -60.39 -144.18 1 A ALA 346 -157.56 41.79 1 A PRO 347 -67.27 -142.93 1 B TYR 10 -168.92 90.15 1 B PRO 12 -71.46 45.32 1 B ASN 15 -98.38 41.76 1 B GLN 28 -97.93 30.07 1 B TYR 29 -62.52 4.51 1 B LEU 68 -116.15 72.41 1 B SER 176 68.78 -179.26 1 B HIS 195 28.62 80.73 1 B GLU 197 -60.33 4.74 1 B THR 198 -141.56 -10.95 1 B PHE 212 -156.82 -64.07 1 B HIS 278 -147.35 38.51 1 B SER 281 -68.92 -177.76 1 B VAL 300 -148.98 -30.57 1 B CYS 323 62.86 -4.61 1 B LYS 325 -77.58 21.67 protein_rep.param carbohydrate.param ion.param water_rep.param ply_lo.param acs.param hto.param bng.param 45.3 6.70 0.00 0.00 6.70 0.00 -13.40 CRYSTALS WERE TWINNED. TWINNED FACTOR WAS CALCULATED BY CNS. TWIN FRACTION 0.277 BASED ON MODEL. 0.212 0.006 0.175 2.8 30.0 2026 44062 4.4 69.8 RANDOM 1 THROUGHOUT 2.0 0.38 0.31 5.00 0.75 0.69 2.8 30.0 12 5551 456 0 5083 0.010 1.47 20.1 0.85 1.20 1.50 2.13 2.00 1.53 2.00 2.51 2.50 37.3 2.800 30.000 1HZX 33221 1.200 0.121 1 9.5000 3.350 97.0 0.69 2.80 2.90 1.17 1 2.50 80.7 data reduction DENZO data scaling SCALEPACK phasing SHARP RHODOPSIN CRYSTAL STRUCTURE OF BOVINE RHODOPSIN 1 N N 1 N N 2 N N 3 N N 4 N N 3 N N 5 N N 5 N N 5 N N 5 N N 5 N N 6 N N 6 N N 6 N N 7 N N 7 N N 7 N N 7 N N 8 N N 8 N N 9 N N 10 N N 10 N N 10 N N 10 N N 5 N N 5 N N 6 N N 6 N N 6 N N 7 N N 7 N N 7 N N 8 N N 9 N N 10 N N 10 N N 11 N N 11 N N A GLU 33 A GLU 34 HELX_P A HIS 65 A HIS 66 1 1 33 A THR 70 A THR 71 HELX_P A GLY 90 A GLY 91 1 2 21 A GLY 90 A GLY 91 HELX_P A GLY 101 A GLY 102 1 3 12 A PHE 105 A PHE 106 HELX_P A LYS 141 A LYS 142 1 4 37 A GLY 149 A GLY 150 HELX_P A ALA 169 A ALA 170 1 5 21 A PRO 170 A PRO 171 HELX_P A VAL 173 A VAL 174 5 6 4 A HIS 195 A HIS 196 HELX_P A THR 198 A THR 199 5 7 4 A ASN 199 A ASN 200 HELX_P A HIS 211 A HIS 212 1 8 13 A PHE 212 A PHE 213 HELX_P A LEU 226 A LEU 227 1 9 15 A THR 243 A THR 244 HELX_P A THR 277 A THR 278 1 10 35 A PRO 285 A PRO 286 HELX_P A LYS 296 A LYS 297 1 11 12 A THR 297 A THR 298 HELX_P A ALA 299 A ALA 300 5 12 3 A VAL 300 A VAL 301 HELX_P A ASN 310 A ASN 311 1 13 11 A ASN 310 A ASN 311 HELX_P A CYS 322 A CYS 323 1 14 13 B GLU 33 B GLU 34 HELX_P B HIS 65 B HIS 66 1 15 33 B THR 70 B THR 71 HELX_P B GLY 90 B GLY 91 1 16 21 B GLY 90 B GLY 91 HELX_P B GLY 101 B GLY 102 1 17 12 B PHE 105 B PHE 106 HELX_P B CYS 140 B CYS 141 1 18 36 B GLY 149 B GLY 150 HELX_P B ALA 169 B ALA 170 1 19 21 B PRO 170 B PRO 171 HELX_P B VAL 173 B VAL 174 5 20 4 B HIS 195 B HIS 196 HELX_P B THR 198 B THR 199 5 21 4 B ASN 199 B ASN 200 HELX_P B HIS 211 B HIS 212 1 22 13 B PHE 212 B PHE 213 HELX_P B LEU 226 B LEU 227 1 23 15 B LYS 245 B LYS 246 HELX_P B THR 277 B THR 278 1 24 33 B PRO 285 B PRO 286 HELX_P B ALA 295 B ALA 296 1 25 11 B LYS 296 B LYS 297 HELX_P B ALA 299 B ALA 300 5 26 4 B VAL 300 B VAL 301 HELX_P B ASN 310 B ASN 311 1 27 11 B ASN 310 B ASN 311 HELX_P B CYS 322 B CYS 323 1 28 13 disulf 2.036 A CYS 110 A SG CYS 111 1_555 A CYS 187 A SG CYS 188 1_555 disulf 2.033 B CYS 110 B SG CYS 111 1_555 B CYS 187 B SG CYS 188 1_555 covale 1.334 both A ACE 0 A C ACE 1 1_555 A MET 1 A N MET 2 1_555 covale 1.446 one N-Glycosylation A ASN 2 A ND2 ASN 3 1_555 D NAG 1 D C1 NAG 1_555 covale 1.440 one N-Glycosylation A ASN 15 A ND2 ASN 16 1_555 C NAG 1 C C1 NAG 1_555 covale 1.352 one A LYS 296 A NZ LYS 297 1_555 A RET 1296 U C15 RET 1_555 covale 1.859 one A CYS 322 A SG CYS 323 1_555 A PLM 1322 S C1 PLM 1_555 covale 1.839 one A CYS 323 A SG CYS 324 1_555 A PLM 1323 T C1 PLM 1_555 covale 1.331 both B ACE 0 B C ACE 1 1_555 B MET 1 B N MET 2 1_555 covale 1.445 one N-Glycosylation B ASN 2 B ND2 ASN 3 1_555 F NAG 1 F C1 NAG 1_555 covale 1.449 one N-Glycosylation B ASN 15 B ND2 ASN 16 1_555 E NAG 1 E C1 NAG 1_555 covale 1.364 one B LYS 296 B NZ LYS 297 1_555 B RET 1296 IA C15 RET 1_555 covale 1.867 one B CYS 322 B SG CYS 323 1_555 B PLM 1322 HA C1 PLM 1_555 covale 1.389 both C NAG 1 C O4 NAG 1_555 C NAG 2 C C1 NAG 1_555 covale 1.385 both C NAG 2 C O4 NAG 1_555 C MAN 3 C C1 MAN 1_555 covale 1.377 both D NAG 1 D O4 NAG 1_555 D NAG 2 D C1 NAG 1_555 covale 1.377 both E NAG 1 E O4 NAG 1_555 E NAG 2 E C1 NAG 1_555 covale 1.393 both E NAG 2 E O4 NAG 1_555 E BMA 3 E C1 BMA 1_555 covale 1.410 both E BMA 3 E O3 BMA 1_555 E BMA 4 E C1 BMA 1_555 covale 1.393 both F NAG 1 F O4 NAG 1_555 F NAG 2 F C1 NAG 1_555 metalc 2.115 A GLU 201 A OE2 GLU 202 1_555 A ZN 957 O ZN ZN 1_555 metalc 2.223 A HIS 211 A ND1 HIS 212 1_555 A ZN 962 Q ZN ZN 1_555 metalc 1.987 A GLN 279 A NE2 GLN 280 1_555 A ZN 957 O ZN ZN 1_555 metalc 2.150 B HIS 211 B ND1 HIS 212 1_555 B ZN 963 GA ZN ZN 1_555 SIGNALING PROTEIN SIGNALING PROTEIN, G-PROTEIN-COUPLED RECEPTORS, MEMBRANE PROTEIN PHOTORECEPTOR CELLS, PHOTOTRANSDUCTION OPSD_BOVIN UNP 1 1 P02699 MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLA VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFT WVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTT LCCGKNPLGDDEASTTVSKTETSQVAPA 1 348 1HZX 1 348 P02699 A 1 2 349 1 348 1HZX 1 348 P02699 B 1 2 349 2 2 2 2 anti-parallel anti-parallel anti-parallel anti-parallel A THR 4 A THR 5 A GLU 5 A GLU 6 A TYR 10 A TYR 11 A VAL 11 A VAL 12 A TYR 178 A TYR 179 A GLU 181 A GLU 182 A SER 186 A SER 187 A ILE 189 A ILE 190 B THR 4 B THR 5 B GLU 5 B GLU 6 B TYR 10 B TYR 11 B VAL 11 B VAL 12 B TYR 178 B TYR 179 B PRO 180 B PRO 181 B CYS 187 B CYS 188 B ILE 189 B ILE 190 76 P 41