0.035844
0.009310
0.007988
0.000000
0.036230
0.013200
0.000000
0.000000
0.028826
0.000000
0.000000
0.000000
Kishan, K.V.R.
Newcomer, M.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
107.39
96.87
104.56
27.899
28.517
37.188
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
O
N
124
N
H
N
125
N
H
N
126
N
N
N
127
S
C
N
128
N
C
N
129
N
O
N
130
S
C
N
131
N
C
N
132
N
C
N
133
N
C
N
134
N
O
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
N
N
149
S
C
N
150
N
C
N
151
N
O
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
O
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
N
N
171
S
C
N
172
N
C
N
173
N
O
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
C
N
178
N
N
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
N
N
196
S
C
N
197
N
C
N
198
N
O
N
199
N
C
N
200
N
C
N
201
N
S
N
202
N
C
N
203
N
O
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
Y
220
N
C
Y
221
N
C
Y
222
N
C
Y
223
N
C
Y
224
N
C
Y
225
N
C
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
N
N
239
S
C
N
240
N
C
N
241
N
O
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
O
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
N
N
256
S
C
N
257
N
C
N
258
N
O
N
259
N
C
N
260
N
O
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
R
C
N
274
N
O
N
275
N
C
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
N
N
287
S
C
N
288
N
C
N
289
N
O
N
290
N
C
Y
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
N
Y
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
N
N
314
S
C
N
315
N
C
N
316
N
O
N
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
C
Y
323
N
C
N
324
N
O
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
S
C
N
339
N
C
N
340
N
O
N
341
N
C
N
342
N
C
N
343
N
C
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
Y
214
N
doub
Y
215
N
sing
Y
216
N
sing
N
217
N
sing
Y
218
N
doub
N
219
N
sing
Y
220
N
doub
N
221
N
sing
Y
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
doub
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
Y
283
N
doub
Y
284
N
sing
Y
285
N
sing
N
286
N
sing
Y
287
N
doub
Y
288
N
sing
Y
289
N
sing
N
290
N
sing
Y
291
N
sing
Y
292
N
doub
N
293
N
sing
Y
294
N
doub
N
295
N
sing
Y
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
Y
311
N
doub
Y
312
N
sing
Y
313
N
sing
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
doub
N
318
N
sing
Y
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
US
Protein Sci.
PRCIEI
0795
0961-8368
10
1046
1055
10.1110/ps.50401
11316885
Effect of pH and salt bridges on structural assembly: molecular structures of the monomer and intertwined dimer of the Eps8 SH3 domain.
2001
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
4
739
743
The SH3 Domain of Eps8 Exists as a Novel Intertwined Dimer.
1997
10.2210/pdb1i07/pdb
pdb_00001i07
300
1
MSC/YALE MIRRORS
1998-10-09
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
7044.960
EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8
SH3 DOMAIN
2
man
polymer
18.015
water
94
nat
water
no
no
KKYAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMRTPE
KKYAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMRTPE
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
sample
10090
Mus musculus
562
Escherichia coli
1
1.90
35.10
7.0
pH 7.0
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Refinement description
1
0
2001-05-09
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2023-08-09
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Two monomers form as a dimer. Crystallized at pH 4.0.
RCSB
Y
RCSB
2001-01-29
REL
REL
HOH
water
1AOJ
pdb entry 1AOJ
PDB
experimental model
TIP
202
2
HOH
HOH
202
A
TIP
203
2
HOH
HOH
203
A
TIP
204
2
HOH
HOH
204
A
TIP
206
2
HOH
HOH
206
A
TIP
207
2
HOH
HOH
207
A
TIP
208
2
HOH
HOH
208
A
TIP
213
2
HOH
HOH
213
A
TIP
216
2
HOH
HOH
216
A
TIP
217
2
HOH
HOH
217
A
TIP
218
2
HOH
HOH
218
A
TIP
220
2
HOH
HOH
220
A
TIP
222
2
HOH
HOH
222
A
TIP
224
2
HOH
HOH
224
A
TIP
226
2
HOH
HOH
226
A
TIP
227
2
HOH
HOH
227
A
TIP
228
2
HOH
HOH
228
A
TIP
229
2
HOH
HOH
229
A
TIP
232
2
HOH
HOH
232
A
TIP
234
2
HOH
HOH
234
A
TIP
236
2
HOH
HOH
236
A
TIP
238
2
HOH
HOH
238
A
TIP
240
2
HOH
HOH
240
A
TIP
241
2
HOH
HOH
241
A
TIP
242
2
HOH
HOH
242
A
TIP
244
2
HOH
HOH
244
A
TIP
246
2
HOH
HOH
246
A
TIP
247
2
HOH
HOH
247
A
TIP
248
2
HOH
HOH
248
A
TIP
250
2
HOH
HOH
250
A
TIP
251
2
HOH
HOH
251
A
TIP
253
2
HOH
HOH
253
A
TIP
255
2
HOH
HOH
255
A
TIP
258
2
HOH
HOH
258
A
TIP
260
2
HOH
HOH
260
A
TIP
261
2
HOH
HOH
261
A
TIP
263
2
HOH
HOH
263
A
TIP
264
2
HOH
HOH
264
A
TIP
265
2
HOH
HOH
265
A
TIP
268
2
HOH
HOH
268
A
TIP
270
2
HOH
HOH
270
A
TIP
271
2
HOH
HOH
271
A
TIP
273
2
HOH
HOH
273
A
TIP
275
2
HOH
HOH
275
A
TIP
277
2
HOH
HOH
277
A
TIP
279
2
HOH
HOH
279
A
TIP
282
2
HOH
HOH
282
A
TIP
283
2
HOH
HOH
283
A
TIP
284
2
HOH
HOH
284
A
TIP
285
2
HOH
HOH
285
A
TIP
288
2
HOH
HOH
288
A
TIP
290
2
HOH
HOH
290
A
TIP
291
2
HOH
HOH
291
A
TIP
293
2
HOH
HOH
293
A
TIP
294
2
HOH
HOH
294
A
TIP
201
2
HOH
HOH
201
B
TIP
205
2
HOH
HOH
205
B
TIP
209
2
HOH
HOH
209
B
TIP
210
2
HOH
HOH
210
B
TIP
211
2
HOH
HOH
211
B
TIP
212
2
HOH
HOH
212
B
TIP
214
2
HOH
HOH
214
B
TIP
215
2
HOH
HOH
215
B
TIP
219
2
HOH
HOH
219
B
TIP
221
2
HOH
HOH
221
B
TIP
223
2
HOH
HOH
223
B
TIP
225
2
HOH
HOH
225
B
TIP
230
2
HOH
HOH
230
B
TIP
231
2
HOH
HOH
231
B
TIP
233
2
HOH
HOH
233
B
TIP
235
2
HOH
HOH
235
B
TIP
237
2
HOH
HOH
237
B
TIP
239
2
HOH
HOH
239
B
TIP
243
2
HOH
HOH
243
B
TIP
245
2
HOH
HOH
245
B
TIP
249
2
HOH
HOH
249
B
TIP
252
2
HOH
HOH
252
B
TIP
254
2
HOH
HOH
254
B
TIP
256
2
HOH
HOH
256
B
TIP
257
2
HOH
HOH
257
B
TIP
259
2
HOH
HOH
259
B
TIP
262
2
HOH
HOH
262
B
TIP
266
2
HOH
HOH
266
B
TIP
267
2
HOH
HOH
267
B
TIP
269
2
HOH
HOH
269
B
TIP
272
2
HOH
HOH
272
B
TIP
274
2
HOH
HOH
274
B
TIP
276
2
HOH
HOH
276
B
TIP
278
2
HOH
HOH
278
B
TIP
280
2
HOH
HOH
280
B
TIP
281
2
HOH
HOH
281
B
TIP
286
2
HOH
HOH
286
B
TIP
287
2
HOH
HOH
287
B
TIP
289
2
HOH
HOH
289
B
TIP
292
2
HOH
HOH
292
B
LYS
6
n
1
LYS
6
A
LYS
7
n
2
LYS
7
A
TYR
8
n
3
TYR
8
A
ALA
9
n
4
ALA
9
A
LYS
10
n
5
LYS
10
A
SER
11
n
6
SER
11
A
LYS
12
n
7
LYS
12
A
TYR
13
n
8
TYR
13
A
ASP
14
n
9
ASP
14
A
PHE
15
n
10
PHE
15
A
VAL
16
n
11
VAL
16
A
ALA
17
n
12
ALA
17
A
ARG
18
n
13
ARG
18
A
ASN
19
n
14
ASN
19
A
SER
20
n
15
SER
20
A
SER
21
n
16
SER
21
A
GLU
22
n
17
GLU
22
A
LEU
23
n
18
LEU
23
A
SER
24
n
19
SER
24
A
VAL
25
n
20
VAL
25
A
MET
26
n
21
MET
26
A
LYS
27
n
22
LYS
27
A
ASP
28
n
23
ASP
28
A
ASP
29
n
24
ASP
29
A
VAL
30
n
25
VAL
30
A
LEU
31
n
26
LEU
31
A
GLU
32
n
27
GLU
32
A
ILE
33
n
28
ILE
33
A
LEU
34
n
29
LEU
34
A
ASP
35
n
30
ASP
35
A
ASP
36
n
31
ASP
36
A
ARG
37
n
32
ARG
37
A
ARG
38
n
33
ARG
38
A
GLN
39
n
34
GLN
39
A
TRP
40
n
35
TRP
40
A
TRP
41
n
36
TRP
41
A
LYS
42
n
37
LYS
42
A
VAL
43
n
38
VAL
43
A
ARG
44
n
39
ARG
44
A
ASN
45
n
40
ASN
45
A
ALA
46
n
41
ALA
46
A
SER
47
n
42
SER
47
A
GLY
48
n
43
GLY
48
A
ASP
49
n
44
ASP
49
A
SER
50
n
45
SER
50
A
GLY
51
n
46
GLY
51
A
PHE
52
n
47
PHE
52
A
VAL
53
n
48
VAL
53
A
PRO
54
n
49
PRO
54
A
ASN
55
n
50
ASN
55
A
ASN
56
n
51
ASN
56
A
ILE
57
n
52
ILE
57
A
LEU
58
n
53
LEU
58
A
ASP
59
n
54
ASP
59
A
ILE
60
n
55
ILE
60
A
MET
61
n
56
MET
61
A
ARG
62
n
57
ARG
62
A
THR
63
n
58
THR
63
A
PRO
64
n
59
PRO
64
A
n
60
65
A
LYS
6
n
1
LYS
6
B
LYS
7
n
2
LYS
7
B
TYR
8
n
3
TYR
8
B
ALA
9
n
4
ALA
9
B
LYS
10
n
5
LYS
10
B
SER
11
n
6
SER
11
B
LYS
12
n
7
LYS
12
B
TYR
13
n
8
TYR
13
B
ASP
14
n
9
ASP
14
B
PHE
15
n
10
PHE
15
B
VAL
16
n
11
VAL
16
B
ALA
17
n
12
ALA
17
B
ARG
18
n
13
ARG
18
B
ASN
19
n
14
ASN
19
B
SER
20
n
15
SER
20
B
SER
21
n
16
SER
21
B
GLU
22
n
17
GLU
22
B
LEU
23
n
18
LEU
23
B
SER
24
n
19
SER
24
B
VAL
25
n
20
VAL
25
B
MET
26
n
21
MET
26
B
LYS
27
n
22
LYS
27
B
ASP
28
n
23
ASP
28
B
ASP
29
n
24
ASP
29
B
VAL
30
n
25
VAL
30
B
LEU
31
n
26
LEU
31
B
GLU
32
n
27
GLU
32
B
ILE
33
n
28
ILE
33
B
LEU
34
n
29
LEU
34
B
ASP
35
n
30
ASP
35
B
ASP
36
n
31
ASP
36
B
ARG
37
n
32
ARG
37
B
ARG
38
n
33
ARG
38
B
GLN
39
n
34
GLN
39
B
TRP
40
n
35
TRP
40
B
TRP
41
n
36
TRP
41
B
LYS
42
n
37
LYS
42
B
VAL
43
n
38
VAL
43
B
ARG
44
n
39
ARG
44
B
ASN
45
n
40
ASN
45
B
ALA
46
n
41
ALA
46
B
SER
47
n
42
SER
47
B
GLY
48
n
43
GLY
48
B
ASP
49
n
44
ASP
49
B
SER
50
n
45
SER
50
B
GLY
51
n
46
GLY
51
B
PHE
52
n
47
PHE
52
B
VAL
53
n
48
VAL
53
B
PRO
54
n
49
PRO
54
B
ASN
55
n
50
ASN
55
B
ASN
56
n
51
ASN
56
B
ILE
57
n
52
ILE
57
B
LEU
58
n
53
LEU
58
B
ASP
59
n
54
ASP
59
B
ILE
60
n
55
ILE
60
B
MET
61
n
56
MET
61
B
ARG
62
n
57
ARG
62
B
THR
63
n
58
THR
63
B
PRO
64
n
59
PRO
64
B
n
60
65
B
author_and_software_defined_assembly
PISA
2
dimeric
3920
-29
7410
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
B
O
VAL
53
B
O
VAL
48
B
N
TRP
41
B
N
TRP
36
B
O
ARG
44
B
O
ARG
39
A
N
GLU
32
A
N
GLU
27
A
N
LEU
31
A
N
LEU
26
A
O
ALA
9
A
O
ALA
4
A
N
LYS
10
A
N
LYS
5
B
O
ASP
59
B
O
ASP
54
A
O
VAL
53
A
O
VAL
48
A
N
TRP
41
A
N
TRP
36
A
O
ARG
44
A
O
ARG
39
B
N
GLU
32
B
N
GLU
27
B
N
ILE
33
B
N
ILE
28
B
O
LYS
7
B
O
LYS
2
B
O
LYS
10
B
O
LYS
5
A
N
ASP
59
A
N
ASP
54
1
A
GLU
65
A
GLU
60
1
Y
1
B
GLU
65
B
GLU
60
1
Y
1
A
A
O
O
HOH
HOH
234
268
2.16
1
A
ASP
28
80.53
-0.67
1
B
ARG
37
52.72
16.65
prot_rep.param
protein.top
water_rep.param
carbohydrate.top
51.89
22.36
8.75
-2.55
1.03
1.40
0.98
1.19
1.57
0.2330000
0.010
0.2020000
1.8
26.0
517
9590
8373
6.2
87.3
1.00
1.00
RANDOM
1
THROUGHOUT
2.0
MOLECULAR REPLACEMENT
pdb entry 1AOJ
Engh & Huber
CNS bulk solvent model used
41.5615
0.307324
0.23
0.20
5.00
0.20
0.14
1.80
1.8
26.0
94
1064
0
0
970
0.007
1.4
25.6
0.87
0.2490000
0.034
0.2540000
1.88
55
779
1211
834
4.5
68.9
0.2340000
0.033
0.2350000
1.98
51
890
1188
941
4.3
79.2
0.2050000
0.028
0.2050000
2.11
53
945
1184
998
4.5
84.3
0.2110000
0.027
0.2100000
2.27
60
996
1200
1056
5.0
88.0
0.2020000
0.025
0.2000000
2.50
63
1032
1204
1095
5.2
90.9
0.2070000
0.052
0.2070000
2.86
16
1102
1209
1118
1.3
92.5
0.2030000
0.019
0.2020000
3.60
112
1039
1191
1151
9.4
96.6
0.1840000
0.018
0.1840000
25.93
107
1073
1203
1180
8.9
98.1
16.4
1.80
25.93
1I07
15
-15
15
-15
20
0
9088
33871
370952.57
0.300000
0.0
4.0
0.0720000
1
3.7
94.0
0.3530000
1.80
1.86
90.2
90.2
refinement
Axel T. Brunger
axel.brunger@yale.edu
1998
Fortran
CNS
package
0.5
data scaling
SCALEPACK
phasing
AMoRE
EPS8 SH3 DOMAIN INTERTWINED DIMER
1
N
N
1
N
N
2
N
N
2
N
N
A
ASP
35
A
ASP
30
HELX_P
A
ARG
38
A
ARG
33
5
1
4
B
ASP
35
B
ASP
30
HELX_P
B
ARG
38
B
ARG
33
5
2
4
HORMONE/GROWTH FACTOR
HORMONE/GROWTH FACTOR, HORMONE-GROWTH FACTOR complex
EPS8_MOUSE
UNP
1
532
Q08509
KKYAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMRTPE
532
591
1I07
6
65
Q08509
A
1
1
60
532
591
1I07
6
65
Q08509
B
1
1
60
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
B
SER
50
B
SER
45
B
PRO
54
B
PRO
49
B
TRP
40
B
TRP
35
B
ARG
44
B
ARG
39
A
VAL
30
A
VAL
25
A
ILE
33
A
ILE
28
A
TYR
8
A
TYR
3
A
SER
11
A
SER
6
B
LEU
58
B
LEU
53
B
ILE
60
B
ILE
55
A
SER
50
A
SER
45
A
PRO
54
A
PRO
49
A
TRP
40
A
TRP
35
A
ARG
44
A
ARG
39
B
VAL
30
B
VAL
25
B
ILE
33
B
ILE
28
B
LYS
7
B
LYS
2
B
SER
11
B
SER
6
A
LEU
58
A
LEU
53
A
MET
61
A
MET
56
1
P 1