data_1I0T # _entry.id 1I0T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1I0T pdb_00001i0t 10.2210/pdb1i0t/pdb NDB ZD0004 ? ? RCSB RCSB012764 ? ? WWPDB D_1000012764 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-04-04 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1I0T _pdbx_database_status.recvd_initial_deposition_date 2001-01-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tereshko, V.' 1 'Wilds, C.J.' 2 'Minasov, G.' 3 'Prakash, T.P.' 4 'Maier, M.A.' 5 'Howard, A.' 6 'Wawrzak, Z.' 7 'Manoharan, M.' 8 'Egli, M.' 9 # _citation.id primary _citation.title 'Detection of alkali metal ions in DNA crystals using state-of-the-art X-ray diffraction experiments.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 29 _citation.page_first 1208 _citation.page_last 1215 _citation.year 2001 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11222771 _citation.pdbx_database_id_DOI 10.1093/nar/29.5.1208 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tereshko, V.' 1 ? primary 'Wilds, C.J.' 2 ? primary 'Minasov, G.' 3 ? primary 'Prakash, T.P.' 4 ? primary 'Maier, M.A.' 5 ? primary 'Howard, A.' 6 ? primary 'Wawrzak, Z.' 7 ? primary 'Manoharan, M.' 8 ? primary 'Egli, M.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*GP*CP*GP*CP*G)-3'" 1810.205 2 ? ? ? ? 2 non-polymer syn SPERMINE 202.340 1 ? ? ? ? 3 water nat water 18.015 40 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCGCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 SPERMINE SPM 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DC n 1 6 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 SPM non-polymer . SPERMINE ? 'C10 H26 N4' 202.340 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DG 6 6 6 DG G A . n B 1 1 DC 1 7 7 DC C B . n B 1 2 DG 2 8 8 DG G B . n B 1 3 DC 3 9 9 DC C B . n B 1 4 DG 4 10 10 DG G B . n B 1 5 DC 5 11 11 DC C B . n B 1 6 DG 6 12 12 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SPM 1 13 13 SPM SPM A . D 3 HOH 1 100 100 HOH HOH A . D 3 HOH 2 101 101 HOH HOH A . D 3 HOH 3 103 103 HOH HOH A . D 3 HOH 4 104 104 HOH HOH A . D 3 HOH 5 105 105 HOH HOH A . D 3 HOH 6 110 110 HOH HOH A . D 3 HOH 7 111 111 HOH HOH A . D 3 HOH 8 112 112 HOH HOH A . D 3 HOH 9 115 115 HOH HOH A . D 3 HOH 10 116 116 HOH HOH A . D 3 HOH 11 117 117 HOH HOH A . D 3 HOH 12 118 118 HOH HOH A . D 3 HOH 13 119 119 HOH HOH A . D 3 HOH 14 120 120 HOH HOH A . D 3 HOH 15 121 121 HOH HOH A . D 3 HOH 16 122 122 HOH HOH A . D 3 HOH 17 124 124 HOH HOH A . D 3 HOH 18 128 128 HOH HOH A . D 3 HOH 19 131 131 HOH HOH A . D 3 HOH 20 132 132 HOH HOH A . D 3 HOH 21 145 145 HOH HOH A . D 3 HOH 22 147 147 HOH HOH A . E 3 HOH 1 102 102 HOH HOH B . E 3 HOH 2 106 106 HOH HOH B . E 3 HOH 3 107 107 HOH HOH B . E 3 HOH 4 109 109 HOH HOH B . E 3 HOH 5 113 113 HOH HOH B . E 3 HOH 6 114 114 HOH HOH B . E 3 HOH 7 123 123 HOH HOH B . E 3 HOH 8 125 125 HOH HOH B . E 3 HOH 9 129 129 HOH HOH B . E 3 HOH 10 133 133 HOH HOH B . E 3 HOH 11 134 134 HOH HOH B . E 3 HOH 12 135 135 HOH HOH B . E 3 HOH 13 136 136 HOH HOH B . E 3 HOH 14 149 149 HOH HOH B . E 3 HOH 15 157 157 HOH HOH B . E 3 HOH 16 165 165 HOH HOH B . E 3 HOH 17 173 173 HOH HOH B . E 3 HOH 18 191 191 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 SHELXL-97 refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 1I0T _cell.length_a 18.316 _cell.length_b 30.680 _cell.length_c 42.491 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1I0T _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 # _exptl.entry_id 1I0T _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.65 _exptl_crystal.density_percent_sol 25.40 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details 'spermine, pH 6.0, VAPOR DIFFUSION, HANGING DROP at 298 K, VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1999-11-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.6630 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.6630 # _reflns.entry_id 1I0T _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F -3 _reflns.d_resolution_low 20 _reflns.d_resolution_high 0.60 _reflns.number_obs 57623 _reflns.number_all 57623 _reflns.percent_possible_obs 96.0 _reflns.pdbx_Rmerge_I_obs 0.0620000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1I0T _refine.ls_number_reflns_obs 57623 _refine.ls_number_reflns_all 57623 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 0.60 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1600000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1600000 _refine.ls_R_factor_R_free 0.1850000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 240 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 40 _refine_hist.number_atoms_total 294 _refine_hist.d_res_high 0.60 _refine_hist.d_res_low 20 # _database_PDB_matrix.entry_id 1I0T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1I0T _struct.title '0.6 A STRUCTURE OF Z-DNA CGCGCG' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1I0T _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'Z-form double helix, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1I0T _struct_ref.pdbx_db_accession 1I0T _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1I0T A 1 ? 6 ? 1I0T 1 ? 6 ? 1 6 2 1 1I0T B 1 ? 6 ? 1I0T 7 ? 12 ? 7 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 3 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 4 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 6 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SPM _struct_site.pdbx_auth_seq_id 13 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 16 _struct_site.details 'BINDING SITE FOR RESIDUE SPM A 13' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 DG A 2 ? DG A 2 . ? 1_555 ? 2 AC1 16 DG A 2 ? DG A 2 . ? 4_556 ? 3 AC1 16 DC A 3 ? DC A 3 . ? 1_555 ? 4 AC1 16 DG A 4 ? DG A 4 . ? 1_555 ? 5 AC1 16 HOH D . ? HOH A 101 . ? 4_566 ? 6 AC1 16 HOH D . ? HOH A 103 . ? 1_555 ? 7 AC1 16 HOH D . ? HOH A 112 . ? 1_555 ? 8 AC1 16 HOH D . ? HOH A 119 . ? 1_555 ? 9 AC1 16 DG B 2 ? DG B 8 . ? 1_555 ? 10 AC1 16 DC B 3 ? DC B 9 . ? 4_556 ? 11 AC1 16 DC B 3 ? DC B 9 . ? 1_555 ? 12 AC1 16 DG B 4 ? DG B 10 . ? 4_556 ? 13 AC1 16 DG B 4 ? DG B 10 . ? 1_655 ? 14 AC1 16 DC B 5 ? DC B 11 . ? 1_655 ? 15 AC1 16 DG B 6 ? DG B 12 . ? 1_655 ? 16 AC1 16 HOH E . ? HOH B 173 . ? 4_556 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 157 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 191 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_664 _pdbx_validate_symm_contact.dist 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 1.462 1.516 -0.054 0.008 N 2 1 C5 A DC 5 ? ? C6 A DC 5 ? ? 1.393 1.339 0.054 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A DG 4 ? ? "O3'" A DG 4 ? ? P A DC 5 ? ? 127.51 119.70 7.81 1.20 Y 2 1 C6 A DC 5 ? ? N1 A DC 5 ? ? C2 A DC 5 ? ? 122.78 120.30 2.48 0.40 N 3 1 C4 A DC 5 ? ? C5 A DC 5 ? ? C6 A DC 5 ? ? 113.78 117.40 -3.62 0.50 N 4 1 C5 B DG 12 ? ? C6 B DG 12 ? ? O6 B DG 12 ? ? 124.80 128.60 -3.80 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 2 ? ? 0.054 'SIDE CHAIN' 2 1 DG B 10 ? ? 0.056 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DC OP3 O N N 1 DC P P N N 2 DC OP1 O N N 3 DC OP2 O N N 4 DC "O5'" O N N 5 DC "C5'" C N N 6 DC "C4'" C N R 7 DC "O4'" O N N 8 DC "C3'" C N S 9 DC "O3'" O N N 10 DC "C2'" C N N 11 DC "C1'" C N R 12 DC N1 N N N 13 DC C2 C N N 14 DC O2 O N N 15 DC N3 N N N 16 DC C4 C N N 17 DC N4 N N N 18 DC C5 C N N 19 DC C6 C N N 20 DC HOP3 H N N 21 DC HOP2 H N N 22 DC "H5'" H N N 23 DC "H5''" H N N 24 DC "H4'" H N N 25 DC "H3'" H N N 26 DC "HO3'" H N N 27 DC "H2'" H N N 28 DC "H2''" H N N 29 DC "H1'" H N N 30 DC H41 H N N 31 DC H42 H N N 32 DC H5 H N N 33 DC H6 H N N 34 DG OP3 O N N 35 DG P P N N 36 DG OP1 O N N 37 DG OP2 O N N 38 DG "O5'" O N N 39 DG "C5'" C N N 40 DG "C4'" C N R 41 DG "O4'" O N N 42 DG "C3'" C N S 43 DG "O3'" O N N 44 DG "C2'" C N N 45 DG "C1'" C N R 46 DG N9 N Y N 47 DG C8 C Y N 48 DG N7 N Y N 49 DG C5 C Y N 50 DG C6 C N N 51 DG O6 O N N 52 DG N1 N N N 53 DG C2 C N N 54 DG N2 N N N 55 DG N3 N N N 56 DG C4 C Y N 57 DG HOP3 H N N 58 DG HOP2 H N N 59 DG "H5'" H N N 60 DG "H5''" H N N 61 DG "H4'" H N N 62 DG "H3'" H N N 63 DG "HO3'" H N N 64 DG "H2'" H N N 65 DG "H2''" H N N 66 DG "H1'" H N N 67 DG H8 H N N 68 DG H1 H N N 69 DG H21 H N N 70 DG H22 H N N 71 HOH O O N N 72 HOH H1 H N N 73 HOH H2 H N N 74 SPM N1 N N N 75 SPM C2 C N N 76 SPM C3 C N N 77 SPM C4 C N N 78 SPM N5 N N N 79 SPM C6 C N N 80 SPM C7 C N N 81 SPM C8 C N N 82 SPM C9 C N N 83 SPM N10 N N N 84 SPM C11 C N N 85 SPM C12 C N N 86 SPM C13 C N N 87 SPM N14 N N N 88 SPM HN11 H N N 89 SPM HN12 H N N 90 SPM H21 H N N 91 SPM H22 H N N 92 SPM H31 H N N 93 SPM H32 H N N 94 SPM H41 H N N 95 SPM H42 H N N 96 SPM HN5 H N N 97 SPM H61 H N N 98 SPM H62 H N N 99 SPM H71 H N N 100 SPM H72 H N N 101 SPM H81 H N N 102 SPM H82 H N N 103 SPM H91 H N N 104 SPM H92 H N N 105 SPM HN0 H N N 106 SPM H111 H N N 107 SPM H112 H N N 108 SPM H121 H N N 109 SPM H122 H N N 110 SPM H131 H N N 111 SPM H132 H N N 112 SPM HN41 H N N 113 SPM HN42 H N N 114 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DC OP3 P sing N N 1 DC OP3 HOP3 sing N N 2 DC P OP1 doub N N 3 DC P OP2 sing N N 4 DC P "O5'" sing N N 5 DC OP2 HOP2 sing N N 6 DC "O5'" "C5'" sing N N 7 DC "C5'" "C4'" sing N N 8 DC "C5'" "H5'" sing N N 9 DC "C5'" "H5''" sing N N 10 DC "C4'" "O4'" sing N N 11 DC "C4'" "C3'" sing N N 12 DC "C4'" "H4'" sing N N 13 DC "O4'" "C1'" sing N N 14 DC "C3'" "O3'" sing N N 15 DC "C3'" "C2'" sing N N 16 DC "C3'" "H3'" sing N N 17 DC "O3'" "HO3'" sing N N 18 DC "C2'" "C1'" sing N N 19 DC "C2'" "H2'" sing N N 20 DC "C2'" "H2''" sing N N 21 DC "C1'" N1 sing N N 22 DC "C1'" "H1'" sing N N 23 DC N1 C2 sing N N 24 DC N1 C6 sing N N 25 DC C2 O2 doub N N 26 DC C2 N3 sing N N 27 DC N3 C4 doub N N 28 DC C4 N4 sing N N 29 DC C4 C5 sing N N 30 DC N4 H41 sing N N 31 DC N4 H42 sing N N 32 DC C5 C6 doub N N 33 DC C5 H5 sing N N 34 DC C6 H6 sing N N 35 DG OP3 P sing N N 36 DG OP3 HOP3 sing N N 37 DG P OP1 doub N N 38 DG P OP2 sing N N 39 DG P "O5'" sing N N 40 DG OP2 HOP2 sing N N 41 DG "O5'" "C5'" sing N N 42 DG "C5'" "C4'" sing N N 43 DG "C5'" "H5'" sing N N 44 DG "C5'" "H5''" sing N N 45 DG "C4'" "O4'" sing N N 46 DG "C4'" "C3'" sing N N 47 DG "C4'" "H4'" sing N N 48 DG "O4'" "C1'" sing N N 49 DG "C3'" "O3'" sing N N 50 DG "C3'" "C2'" sing N N 51 DG "C3'" "H3'" sing N N 52 DG "O3'" "HO3'" sing N N 53 DG "C2'" "C1'" sing N N 54 DG "C2'" "H2'" sing N N 55 DG "C2'" "H2''" sing N N 56 DG "C1'" N9 sing N N 57 DG "C1'" "H1'" sing N N 58 DG N9 C8 sing Y N 59 DG N9 C4 sing Y N 60 DG C8 N7 doub Y N 61 DG C8 H8 sing N N 62 DG N7 C5 sing Y N 63 DG C5 C6 sing N N 64 DG C5 C4 doub Y N 65 DG C6 O6 doub N N 66 DG C6 N1 sing N N 67 DG N1 C2 sing N N 68 DG N1 H1 sing N N 69 DG C2 N2 sing N N 70 DG C2 N3 doub N N 71 DG N2 H21 sing N N 72 DG N2 H22 sing N N 73 DG N3 C4 sing N N 74 HOH O H1 sing N N 75 HOH O H2 sing N N 76 SPM N1 C2 sing N N 77 SPM N1 HN11 sing N N 78 SPM N1 HN12 sing N N 79 SPM C2 C3 sing N N 80 SPM C2 H21 sing N N 81 SPM C2 H22 sing N N 82 SPM C3 C4 sing N N 83 SPM C3 H31 sing N N 84 SPM C3 H32 sing N N 85 SPM C4 N5 sing N N 86 SPM C4 H41 sing N N 87 SPM C4 H42 sing N N 88 SPM N5 C6 sing N N 89 SPM N5 HN5 sing N N 90 SPM C6 C7 sing N N 91 SPM C6 H61 sing N N 92 SPM C6 H62 sing N N 93 SPM C7 C8 sing N N 94 SPM C7 H71 sing N N 95 SPM C7 H72 sing N N 96 SPM C8 C9 sing N N 97 SPM C8 H81 sing N N 98 SPM C8 H82 sing N N 99 SPM C9 N10 sing N N 100 SPM C9 H91 sing N N 101 SPM C9 H92 sing N N 102 SPM N10 C11 sing N N 103 SPM N10 HN0 sing N N 104 SPM C11 C12 sing N N 105 SPM C11 H111 sing N N 106 SPM C11 H112 sing N N 107 SPM C12 C13 sing N N 108 SPM C12 H121 sing N N 109 SPM C12 H122 sing N N 110 SPM C13 N14 sing N N 111 SPM C13 H131 sing N N 112 SPM C13 H132 sing N N 113 SPM N14 HN41 sing N N 114 SPM N14 HN42 sing N N 115 # _ndb_struct_conf_na.entry_id 1I0T _ndb_struct_conf_na.feature 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 6 1_555 -0.200 -0.133 0.058 1.810 -3.201 2.764 1 A_DC1:DG12_B A 1 ? B 12 ? 19 1 1 A DG 2 1_555 B DC 5 1_555 0.259 -0.168 0.128 -2.760 3.834 1.806 2 A_DG2:DC11_B A 2 ? B 11 ? 19 1 1 A DC 3 1_555 B DG 4 1_555 -0.295 -0.154 0.030 2.807 6.271 2.776 3 A_DC3:DG10_B A 3 ? B 10 ? 19 1 1 A DG 4 1_555 B DC 3 1_555 0.292 -0.179 0.043 -4.966 3.459 2.402 4 A_DG4:DC9_B A 4 ? B 9 ? 19 1 1 A DC 5 1_555 B DG 2 1_555 -0.178 -0.178 -0.052 5.492 -7.915 1.095 5 A_DC5:DG8_B A 5 ? B 8 ? 19 1 1 A DG 6 1_555 B DC 1 1_555 0.217 -0.157 0.065 -3.906 2.661 1.747 6 A_DG6:DC7_B A 6 ? B 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 6 1_555 A DG 2 1_555 B DC 5 1_555 0.266 5.459 3.553 2.353 -1.574 -9.207 -28.654 7.356 4.222 9.516 14.221 -9.631 1 AA_DC1DG2:DC11DG12_BB A 1 ? B 12 ? A 2 ? B 11 ? 1 A DG 2 1_555 B DC 5 1_555 A DC 3 1_555 B DG 4 1_555 0.655 -0.300 3.183 1.332 -6.724 -54.643 0.710 0.785 3.114 7.292 1.445 -55.039 2 AA_DG2DC3:DG10DC11_BB A 2 ? B 11 ? A 3 ? B 10 ? 1 A DC 3 1_555 B DG 4 1_555 A DG 4 1_555 B DC 3 1_555 -0.433 5.578 3.613 -1.579 1.080 -7.148 -46.785 -8.566 2.585 -8.467 -12.375 -7.399 3 AA_DC3DG4:DC9DG10_BB A 3 ? B 10 ? A 4 ? B 9 ? 1 A DG 4 1_555 B DC 3 1_555 A DC 5 1_555 B DG 2 1_555 -0.704 -1.054 3.278 0.610 -0.757 -51.540 1.264 -0.769 3.271 0.871 0.701 -51.549 4 AA_DG4DC5:DG8DC9_BB A 4 ? B 9 ? A 5 ? B 8 ? 1 A DC 5 1_555 B DG 2 1_555 A DG 6 1_555 B DC 1 1_555 0.097 5.520 3.702 2.341 -0.128 -6.768 -43.650 10.543 3.566 1.047 19.089 -7.162 5 AA_DC5DG6:DC7DG8_BB A 5 ? B 8 ? A 6 ? B 7 ? # _atom_sites.entry_id 1I0T _atom_sites.fract_transf_matrix[1][1] 0.054597 _atom_sites.fract_transf_matrix[1][2] -0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.032595 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023534 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 18.358 10.048 33.397 1.00 9.59 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 18.955 11.100 32.587 1.00 8.33 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 18.119 12.372 32.614 1.00 5.49 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 16.841 12.052 32.030 1.00 5.41 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 17.820 12.935 33.964 1.00 4.84 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 17.923 14.367 33.903 1.00 5.21 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 16.402 12.597 34.259 1.00 4.98 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 15.805 12.579 32.853 1.00 4.29 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 14.643 11.747 32.731 1.00 4.06 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 13.359 12.307 32.782 1.00 3.77 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 13.243 13.539 32.873 1.00 4.23 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 12.283 11.495 32.743 1.00 3.70 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 12.400 10.152 32.688 1.00 4.11 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 11.328 9.400 32.655 1.00 4.83 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 13.691 9.534 32.638 1.00 4.48 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 14.784 10.369 32.657 1.00 4.99 ? 1 DC A C6 1 ATOM 17 P P . DG A 1 2 ? 19.242 15.191 34.264 1.00 7.28 ? 2 DG A P 1 ATOM 18 O OP1 . DG A 1 2 ? 19.958 14.603 35.416 1.00 10.94 ? 2 DG A OP1 1 ATOM 19 O OP2 . DG A 1 2 ? 18.728 16.593 34.371 1.00 12.31 ? 2 DG A OP2 1 ATOM 20 O "O5'" . DG A 1 2 ? 20.181 15.016 32.987 1.00 5.67 ? 2 DG A "O5'" 1 ATOM 21 C "C5'" . DG A 1 2 ? 19.757 15.565 31.737 1.00 4.47 ? 2 DG A "C5'" 1 ATOM 22 C "C4'" . DG A 1 2 ? 20.761 15.173 30.683 1.00 3.92 ? 2 DG A "C4'" 1 ATOM 23 O "O4'" . DG A 1 2 ? 20.845 13.760 30.665 1.00 4.87 ? 2 DG A "O4'" 1 ATOM 24 C "C3'" . DG A 1 2 ? 20.378 15.611 29.265 1.00 3.53 ? 2 DG A "C3'" 1 ATOM 25 O "O3'" . DG A 1 2 ? 21.081 16.801 28.887 1.00 3.89 ? 2 DG A "O3'" 1 ATOM 26 C "C2'" . DG A 1 2 ? 20.816 14.480 28.401 1.00 4.00 ? 2 DG A "C2'" 1 ATOM 27 C "C1'" . DG A 1 2 ? 20.972 13.271 29.334 1.00 5.82 ? 2 DG A "C1'" 1 ATOM 28 N N9 . DG A 1 2 ? 19.977 12.220 29.124 1.00 4.45 ? 2 DG A N9 1 ATOM 29 C C8 . DG A 1 2 ? 20.209 10.846 29.017 1.00 5.07 ? 2 DG A C8 1 ATOM 30 N N7 . DG A 1 2 ? 19.130 10.161 28.974 1.00 5.78 ? 2 DG A N7 1 ATOM 31 C C5 . DG A 1 2 ? 18.080 11.065 29.023 1.00 4.26 ? 2 DG A C5 1 ATOM 32 C C6 . DG A 1 2 ? 16.701 10.896 29.076 1.00 4.03 ? 2 DG A C6 1 ATOM 33 O O6 . DG A 1 2 ? 16.070 9.805 29.126 1.00 4.62 ? 2 DG A O6 1 ATOM 34 N N1 . DG A 1 2 ? 16.018 12.095 29.136 1.00 3.65 ? 2 DG A N1 1 ATOM 35 C C2 . DG A 1 2 ? 16.606 13.319 29.258 1.00 3.73 ? 2 DG A C2 1 ATOM 36 N N2 . DG A 1 2 ? 15.807 14.396 29.379 1.00 3.93 ? 2 DG A N2 1 ATOM 37 N N3 . DG A 1 2 ? 17.934 13.522 29.269 1.00 3.49 ? 2 DG A N3 1 ATOM 38 C C4 . DG A 1 2 ? 18.605 12.353 29.154 1.00 4.01 ? 2 DG A C4 1 ATOM 39 P P . DC A 1 3 ? 20.404 18.231 28.726 1.00 3.55 ? 3 DC A P 1 ATOM 40 O OP1 . DC A 1 3 ? 21.532 19.207 28.557 1.00 4.28 ? 3 DC A OP1 1 ATOM 41 O OP2 . DC A 1 3 ? 19.396 18.443 29.830 1.00 5.19 ? 3 DC A OP2 1 ATOM 42 O "O5'" . DC A 1 3 ? 19.607 18.061 27.348 1.00 4.77 ? 3 DC A "O5'" 1 ATOM 43 C "C5'" . DC A 1 3 ? 19.452 19.166 26.433 1.00 4.10 ? 3 DC A "C5'" 1 ATOM 44 C "C4'" . DC A 1 3 ? 18.027 19.201 25.874 1.00 4.46 ? 3 DC A "C4'" 1 ATOM 45 O "O4'" . DC A 1 3 ? 17.800 17.970 25.131 1.00 5.55 ? 3 DC A "O4'" 1 ATOM 46 C "C3'" . DC A 1 3 ? 16.913 19.297 26.869 1.00 4.51 ? 3 DC A "C3'" 1 ATOM 47 O "O3'" . DC A 1 3 ? 15.819 20.014 26.301 1.00 6.01 ? 3 DC A "O3'" 1 ATOM 48 C "C2'" . DC A 1 3 ? 16.490 17.880 27.057 1.00 5.10 ? 3 DC A "C2'" 1 ATOM 49 C "C1'" . DC A 1 3 ? 16.669 17.309 25.663 1.00 4.26 ? 3 DC A "C1'" 1 ATOM 50 N N1 . DC A 1 3 ? 16.951 15.877 25.646 1.00 5.14 ? 3 DC A N1 1 ATOM 51 C C2 . DC A 1 3 ? 15.892 14.967 25.746 1.00 4.21 ? 3 DC A C2 1 ATOM 52 O O2 . DC A 1 3 ? 14.735 15.451 25.803 1.00 4.65 ? 3 DC A O2 1 ATOM 53 N N3 . DC A 1 3 ? 16.116 13.633 25.794 1.00 4.30 ? 3 DC A N3 1 ATOM 54 C C4 . DC A 1 3 ? 17.367 13.205 25.739 1.00 4.49 ? 3 DC A C4 1 ATOM 55 N N4 . DC A 1 3 ? 17.594 11.882 25.845 1.00 5.79 ? 3 DC A N4 1 ATOM 56 C C5 . DC A 1 3 ? 18.479 14.084 25.604 1.00 4.97 ? 3 DC A C5 1 ATOM 57 C C6 . DC A 1 3 ? 18.248 15.396 25.549 1.00 5.32 ? 3 DC A C6 1 ATOM 58 P P . DG A 1 4 ? 15.629 21.614 26.394 1.00 6.27 ? 4 DG A P 1 ATOM 59 O OP1 . DG A 1 4 ? 16.146 22.065 27.726 1.00 6.62 ? 4 DG A OP1 1 ATOM 60 O OP2 . DG A 1 4 ? 14.194 21.862 25.987 1.00 10.77 ? 4 DG A OP2 1 ATOM 61 O "O5'" . DG A 1 4 ? 16.628 22.232 25.325 1.00 5.31 ? 4 DG A "O5'" 1 ATOM 62 C "C5'" . DG A 1 4 ? 16.338 22.063 23.917 1.00 6.40 ? 4 DG A "C5'" 1 ATOM 63 C "C4'" . DG A 1 4 ? 17.463 22.547 23.116 1.00 7.22 ? 4 DG A "C4'" 1 ATOM 64 O "O4'" . DG A 1 4 ? 18.628 21.762 23.429 1.00 5.00 ? 4 DG A "O4'" 1 ATOM 65 C "C3'" . DG A 1 4 ? 17.262 22.370 21.597 1.00 6.29 ? 4 DG A "C3'" 1 ATOM 66 O "O3'" . DG A 1 4 ? 16.632 23.572 21.098 1.00 7.93 ? 4 DG A "O3'" 1 ATOM 67 C "C2'" . DG A 1 4 ? 18.609 22.138 21.078 1.00 7.52 ? 4 DG A "C2'" 1 ATOM 68 C "C1'" . DG A 1 4 ? 19.450 21.646 22.265 1.00 4.92 ? 4 DG A "C1'" 1 ATOM 69 N N9 . DG A 1 4 ? 19.885 20.260 22.178 1.00 4.82 ? 4 DG A N9 1 ATOM 70 C C8 . DG A 1 4 ? 21.181 19.834 22.165 1.00 4.77 ? 4 DG A C8 1 ATOM 71 N N7 . DG A 1 4 ? 21.300 18.511 22.114 1.00 4.59 ? 4 DG A N7 1 ATOM 72 C C5 . DG A 1 4 ? 19.977 18.075 22.132 1.00 3.86 ? 4 DG A C5 1 ATOM 73 C C6 . DG A 1 4 ? 19.471 16.745 22.108 1.00 3.75 ? 4 DG A C6 1 ATOM 74 O O6 . DG A 1 4 ? 20.140 15.692 22.128 1.00 4.27 ? 4 DG A O6 1 ATOM 75 N N1 . DG A 1 4 ? 18.105 16.710 22.127 1.00 3.31 ? 4 DG A N1 1 ATOM 76 C C2 . DG A 1 4 ? 17.304 17.835 22.189 1.00 3.42 ? 4 DG A C2 1 ATOM 77 N N2 . DG A 1 4 ? 15.966 17.603 22.273 1.00 4.12 ? 4 DG A N2 1 ATOM 78 N N3 . DG A 1 4 ? 17.749 19.078 22.165 1.00 3.61 ? 4 DG A N3 1 ATOM 79 C C4 . DG A 1 4 ? 19.083 19.127 22.161 1.00 3.72 ? 4 DG A C4 1 ATOM 80 P P . DC A 1 5 ? 15.330 23.679 20.281 1.00 7.84 ? 5 DC A P 1 ATOM 81 O OP1 . DC A 1 5 ? 15.380 24.878 19.399 1.00 9.73 ? 5 DC A OP1 1 ATOM 82 O OP2 . DC A 1 5 ? 14.141 23.558 21.217 1.00 12.76 ? 5 DC A OP2 1 ATOM 83 O "O5'" . DC A 1 5 ? 15.349 22.369 19.414 1.00 5.74 ? 5 DC A "O5'" 1 ATOM 84 C "C5'" . DC A 1 5 ? 14.490 22.313 18.276 1.00 5.21 ? 5 DC A "C5'" 1 ATOM 85 C "C4'" . DC A 1 5 ? 14.060 20.887 18.066 1.00 5.72 ? 5 DC A "C4'" 1 ATOM 86 O "O4'" . DC A 1 5 ? 15.216 20.135 17.659 1.00 6.66 ? 5 DC A "O4'" 1 ATOM 87 C "C3'" . DC A 1 5 ? 13.500 20.196 19.301 1.00 5.84 ? 5 DC A "C3'" 1 ATOM 88 O "O3'" . DC A 1 5 ? 12.288 19.552 18.985 1.00 6.83 ? 5 DC A "O3'" 1 ATOM 89 C "C2'" . DC A 1 5 ? 14.525 19.163 19.665 1.00 7.78 ? 5 DC A "C2'" 1 ATOM 90 C "C1'" . DC A 1 5 ? 15.191 18.886 18.320 1.00 5.67 ? 5 DC A "C1'" 1 ATOM 91 N N1 . DC A 1 5 ? 16.572 18.413 18.419 1.00 6.18 ? 5 DC A N1 1 ATOM 92 C C2 . DC A 1 5 ? 16.749 17.018 18.582 1.00 5.53 ? 5 DC A C2 1 ATOM 93 O O2 . DC A 1 5 ? 15.767 16.279 18.593 1.00 7.35 ? 5 DC A O2 1 ATOM 94 N N3 . DC A 1 5 ? 18.043 16.581 18.683 1.00 6.10 ? 5 DC A N3 1 ATOM 95 C C4 . DC A 1 5 ? 19.058 17.443 18.703 1.00 6.34 ? 5 DC A C4 1 ATOM 96 N N4 . DC A 1 5 ? 20.344 16.972 18.807 1.00 7.18 ? 5 DC A N4 1 ATOM 97 C C5 . DC A 1 5 ? 18.908 18.865 18.601 1.00 6.87 ? 5 DC A C5 1 ATOM 98 C C6 . DC A 1 5 ? 17.585 19.283 18.480 1.00 7.36 ? 5 DC A C6 1 ATOM 99 P P . DG A 1 6 ? 10.912 20.372 19.255 1.00 6.98 ? 6 DG A P 1 ATOM 100 O OP1 . DG A 1 6 ? 10.903 20.945 20.593 1.00 7.18 ? 6 DG A OP1 1 ATOM 101 O OP2 . DG A 1 6 ? 9.799 19.441 18.824 1.00 10.35 ? 6 DG A OP2 1 ATOM 102 O "O5'" . DG A 1 6 ? 11.019 21.594 18.234 1.00 6.71 ? 6 DG A "O5'" 1 ATOM 103 C "C5'" . DG A 1 6 ? 10.639 21.434 16.863 1.00 5.64 ? 6 DG A "C5'" 1 ATOM 104 C "C4'" . DG A 1 6 ? 10.707 22.762 16.166 1.00 5.18 ? 6 DG A "C4'" 1 ATOM 105 O "O4'" . DG A 1 6 ? 12.066 23.213 16.139 1.00 4.64 ? 6 DG A "O4'" 1 ATOM 106 C "C3'" . DG A 1 6 ? 10.254 22.712 14.709 1.00 5.65 ? 6 DG A "C3'" 1 ATOM 107 O "O3'" . DG A 1 6 ? 9.641 23.928 14.297 1.00 5.68 ? 6 DG A "O3'" 1 ATOM 108 C "C2'" . DG A 1 6 ? 11.517 22.503 13.950 1.00 6.63 ? 6 DG A "C2'" 1 ATOM 109 C "C1'" . DG A 1 6 ? 12.508 23.353 14.774 1.00 4.65 ? 6 DG A "C1'" 1 ATOM 110 N N9 . DG A 1 6 ? 13.886 22.947 14.667 1.00 4.73 ? 6 DG A N9 1 ATOM 111 C C8 . DG A 1 6 ? 14.979 23.838 14.590 1.00 6.49 ? 6 DG A C8 1 ATOM 112 N N7 . DG A 1 6 ? 16.114 23.264 14.622 1.00 5.59 ? 6 DG A N7 1 ATOM 113 C C5 . DG A 1 6 ? 15.820 21.900 14.705 1.00 4.48 ? 6 DG A C5 1 ATOM 114 C C6 . DG A 1 6 ? 16.706 20.798 14.768 1.00 4.73 ? 6 DG A C6 1 ATOM 115 O O6 . DG A 1 6 ? 17.937 20.812 14.797 1.00 5.60 ? 6 DG A O6 1 ATOM 116 N N1 . DG A 1 6 ? 16.000 19.591 14.799 1.00 4.09 ? 6 DG A N1 1 ATOM 117 C C2 . DG A 1 6 ? 14.629 19.486 14.880 1.00 4.09 ? 6 DG A C2 1 ATOM 118 N N2 . DG A 1 6 ? 14.112 18.250 15.003 1.00 4.71 ? 6 DG A N2 1 ATOM 119 N N3 . DG A 1 6 ? 13.774 20.507 14.848 1.00 4.01 ? 6 DG A N3 1 ATOM 120 C C4 . DG A 1 6 ? 14.451 21.703 14.733 1.00 4.18 ? 6 DG A C4 1 ATOM 121 O "O5'" . DC B 1 1 ? 19.057 9.485 14.595 1.00 11.99 ? 7 DC B "O5'" 1 ATOM 122 C "C5'" . DC B 1 1 ? 19.018 10.870 15.038 1.00 15.37 ? 7 DC B "C5'" 1 ATOM 123 C "C4'" . DC B 1 1 ? 17.683 11.366 15.519 1.00 4.39 ? 7 DC B "C4'" 1 ATOM 124 O "O4'" . DC B 1 1 ? 17.878 12.674 16.109 1.00 4.38 ? 7 DC B "O4'" 1 ATOM 125 C "C3'" . DC B 1 1 ? 16.636 11.567 14.447 1.00 4.07 ? 7 DC B "C3'" 1 ATOM 126 O "O3'" . DC B 1 1 ? 15.321 11.367 14.926 1.00 4.93 ? 7 DC B "O3'" 1 ATOM 127 C "C2'" . DC B 1 1 ? 16.758 13.022 14.083 1.00 4.31 ? 7 DC B "C2'" 1 ATOM 128 C "C1'" . DC B 1 1 ? 17.065 13.623 15.454 1.00 3.81 ? 7 DC B "C1'" 1 ATOM 129 N N1 . DC B 1 1 ? 17.780 14.885 15.409 1.00 4.09 ? 7 DC B N1 1 ATOM 130 C C2 . DC B 1 1 ? 17.013 16.051 15.240 1.00 3.86 ? 7 DC B C2 1 ATOM 131 O O2 . DC B 1 1 ? 15.787 15.954 15.165 1.00 4.20 ? 7 DC B O2 1 ATOM 132 N N3 . DC B 1 1 ? 17.658 17.243 15.155 1.00 3.86 ? 7 DC B N3 1 ATOM 133 C C4 . DC B 1 1 ? 18.987 17.300 15.210 1.00 4.02 ? 7 DC B C4 1 ATOM 134 N N4 . DC B 1 1 ? 19.589 18.470 15.135 1.00 4.76 ? 7 DC B N4 1 ATOM 135 C C5 . DC B 1 1 ? 19.776 16.118 15.379 1.00 4.64 ? 7 DC B C5 1 ATOM 136 C C6 . DC B 1 1 ? 19.142 14.943 15.460 1.00 4.25 ? 7 DC B C6 1 ATOM 137 P P . DG B 1 2 ? 14.542 9.997 14.866 1.00 6.81 ? 8 DG B P 1 ATOM 138 O OP1 . DG B 1 2 ? 14.789 9.342 13.518 1.00 11.63 ? 8 DG B OP1 1 ATOM 139 O OP2 . DG B 1 2 ? 13.153 10.327 15.301 1.00 10.32 ? 8 DG B OP2 1 ATOM 140 O "O5'" . DG B 1 2 ? 15.250 9.053 15.938 1.00 5.31 ? 8 DG B "O5'" 1 ATOM 141 C "C5'" . DG B 1 2 ? 15.101 9.318 17.332 1.00 4.34 ? 8 DG B "C5'" 1 ATOM 142 C "C4'" . DG B 1 2 ? 16.032 8.430 18.126 1.00 3.82 ? 8 DG B "C4'" 1 ATOM 143 O "O4'" . DG B 1 2 ? 17.376 8.729 17.794 1.00 3.85 ? 8 DG B "O4'" 1 ATOM 144 C "C3'" . DG B 1 2 ? 15.900 8.649 19.628 1.00 4.39 ? 8 DG B "C3'" 1 ATOM 145 O "O3'" . DG B 1 2 ? 14.997 7.715 20.178 1.00 6.11 ? 8 DG B "O3'" 1 ATOM 146 C "C2'" . DG B 1 2 ? 17.301 8.439 20.153 1.00 5.02 ? 8 DG B "C2'" 1 ATOM 147 C "C1'" . DG B 1 2 ? 18.220 8.655 18.941 1.00 3.84 ? 8 DG B "C1'" 1 ATOM 148 N N9 . DG B 1 2 ? 19.023 9.851 18.963 1.00 4.06 ? 8 DG B N9 1 ATOM 149 C C8 . DG B 1 2 ? 20.420 9.864 18.801 1.00 5.69 ? 8 DG B C8 1 ATOM 150 N N7 . DG B 1 2 ? 20.918 11.079 18.748 1.00 5.19 ? 8 DG B N7 1 ATOM 151 C C5 . DG B 1 2 ? 19.809 11.890 18.855 1.00 4.89 ? 8 DG B C5 1 ATOM 152 C C6 . DG B 1 2 ? 19.745 13.327 18.821 1.00 4.85 ? 8 DG B C6 1 ATOM 153 O O6 . DG B 1 2 ? 20.669 14.125 18.730 1.00 6.46 ? 8 DG B O6 1 ATOM 154 N N1 . DG B 1 2 ? 18.391 13.738 18.935 1.00 4.65 ? 8 DG B N1 1 ATOM 155 C C2 . DG B 1 2 ? 17.313 12.936 18.981 1.00 4.72 ? 8 DG B C2 1 ATOM 156 N N2 . DG B 1 2 ? 16.076 13.514 19.001 1.00 6.39 ? 8 DG B N2 1 ATOM 157 N N3 . DG B 1 2 ? 17.364 11.599 19.050 1.00 4.09 ? 8 DG B N3 1 ATOM 158 C C4 . DG B 1 2 ? 18.642 11.153 18.972 1.00 4.02 ? 8 DG B C4 1 ATOM 159 P P . DC B 1 3 ? 14.398 7.881 21.601 1.00 7.33 ? 9 DC B P 1 ATOM 160 O OP1 . DC B 1 3 ? 15.487 8.092 22.552 1.00 16.24 ? 9 DC B OP1 1 ATOM 161 O OP2 . DC B 1 3 ? 13.443 6.678 21.713 1.00 16.78 ? 9 DC B OP2 1 ATOM 162 O "O5'" . DC B 1 3 ? 13.438 9.100 21.457 1.00 5.77 ? 9 DC B "O5'" 1 ATOM 163 C "C5'" . DC B 1 3 ? 12.367 9.346 22.392 1.00 5.68 ? 9 DC B "C5'" 1 ATOM 164 C "C4'" . DC B 1 3 ? 12.094 10.830 22.499 1.00 4.19 ? 9 DC B "C4'" 1 ATOM 165 O "O4'" . DC B 1 3 ? 13.227 11.463 23.123 1.00 4.43 ? 9 DC B "O4'" 1 ATOM 166 C "C3'" . DC B 1 3 ? 11.882 11.549 21.175 1.00 4.75 ? 9 DC B "C3'" 1 ATOM 167 O "O3'" . DC B 1 3 ? 10.897 12.548 21.290 1.00 4.90 ? 9 DC B "O3'" 1 ATOM 168 C "C2'" . DC B 1 3 ? 13.215 12.203 20.898 1.00 4.16 ? 9 DC B "C2'" 1 ATOM 169 C "C1'" . DC B 1 3 ? 13.655 12.547 22.328 1.00 4.21 ? 9 DC B "C1'" 1 ATOM 170 N N1 . DC B 1 3 ? 15.100 12.683 22.450 1.00 3.76 ? 9 DC B N1 1 ATOM 171 C C2 . DC B 1 3 ? 15.684 13.939 22.349 1.00 3.77 ? 9 DC B C2 1 ATOM 172 O O2 . DC B 1 3 ? 14.951 14.944 22.244 1.00 4.65 ? 9 DC B O2 1 ATOM 173 N N3 . DC B 1 3 ? 17.032 14.029 22.325 1.00 3.59 ? 9 DC B N3 1 ATOM 174 C C4 . DC B 1 3 ? 17.778 12.928 22.384 1.00 3.52 ? 9 DC B C4 1 ATOM 175 N N4 . DC B 1 3 ? 19.110 13.047 22.310 1.00 4.13 ? 9 DC B N4 1 ATOM 176 C C5 . DC B 1 3 ? 17.200 11.640 22.535 1.00 3.91 ? 9 DC B C5 1 ATOM 177 C C6 . DC B 1 3 ? 15.865 11.549 22.541 1.00 4.14 ? 9 DC B C6 1 ATOM 178 P P . DG B 1 4 ? 9.367 12.243 20.923 1.00 5.67 ? 10 DG B P 1 ATOM 179 O OP1 . DG B 1 4 ? 9.287 11.366 19.687 1.00 7.36 ? 10 DG B OP1 1 ATOM 180 O OP2 . DG B 1 4 ? 8.679 13.538 20.931 1.00 9.13 ? 10 DG B OP2 1 ATOM 181 O "O5'" . DG B 1 4 ? 8.866 11.302 22.125 1.00 4.81 ? 10 DG B "O5'" 1 ATOM 182 C "C5'" . DG B 1 4 ? 8.783 11.868 23.434 1.00 3.71 ? 10 DG B "C5'" 1 ATOM 183 C "C4'" . DG B 1 4 ? 8.272 10.819 24.388 1.00 3.45 ? 10 DG B "C4'" 1 ATOM 184 O "O4'" . DG B 1 4 ? 9.187 9.734 24.455 1.00 3.95 ? 10 DG B "O4'" 1 ATOM 185 C "C3'" . DG B 1 4 ? 8.130 11.363 25.811 1.00 3.89 ? 10 DG B "C3'" 1 ATOM 186 O "O3'" . DG B 1 4 ? 6.774 11.727 26.059 1.00 4.67 ? 10 DG B "O3'" 1 ATOM 187 C "C2'" . DG B 1 4 ? 8.528 10.229 26.711 1.00 4.18 ? 10 DG B "C2'" 1 ATOM 188 C "C1'" . DG B 1 4 ? 9.365 9.312 25.817 1.00 3.57 ? 10 DG B "C1'" 1 ATOM 189 N N9 . DG B 1 4 ? 10.809 9.307 26.069 1.00 3.55 ? 10 DG B N9 1 ATOM 190 C C8 . DG B 1 4 ? 11.549 8.166 26.188 1.00 4.01 ? 10 DG B C8 1 ATOM 191 N N7 . DG B 1 4 ? 12.835 8.378 26.218 1.00 3.88 ? 10 DG B N7 1 ATOM 192 C C5 . DG B 1 4 ? 12.945 9.751 26.105 1.00 3.73 ? 10 DG B C5 1 ATOM 193 C C6 . DG B 1 4 ? 14.086 10.586 26.077 1.00 4.16 ? 10 DG B C6 1 ATOM 194 O O6 . DG B 1 4 ? 15.266 10.205 26.076 1.00 4.97 ? 10 DG B O6 1 ATOM 195 N N1 . DG B 1 4 ? 13.767 11.931 25.996 1.00 3.58 ? 10 DG B N1 1 ATOM 196 C C2 . DG B 1 4 ? 12.475 12.425 25.854 1.00 3.37 ? 10 DG B C2 1 ATOM 197 N N2 . DG B 1 4 ? 12.353 13.737 25.666 1.00 3.88 ? 10 DG B N2 1 ATOM 198 N N3 . DG B 1 4 ? 11.393 11.648 25.879 1.00 3.28 ? 10 DG B N3 1 ATOM 199 C C4 . DG B 1 4 ? 11.696 10.344 26.018 1.00 3.22 ? 10 DG B C4 1 ATOM 200 P P . DC B 1 5 ? 6.384 13.159 26.638 1.00 4.08 ? 11 DC B P 1 ATOM 201 O OP1 . DC B 1 5 ? 4.934 13.104 26.974 1.00 6.07 ? 11 DC B OP1 1 ATOM 202 O OP2 . DC B 1 5 ? 6.855 14.213 25.703 1.00 5.16 ? 11 DC B OP2 1 ATOM 203 O "O5'" . DC B 1 5 ? 7.242 13.150 28.004 1.00 4.93 ? 11 DC B "O5'" 1 ATOM 204 C "C5'" . DC B 1 5 ? 6.864 13.982 29.116 1.00 3.86 ? 11 DC B "C5'" 1 ATOM 205 C "C4'" . DC B 1 5 ? 8.040 14.753 29.632 1.00 4.06 ? 11 DC B "C4'" 1 ATOM 206 O "O4'" . DC B 1 5 ? 9.017 13.845 30.166 1.00 4.32 ? 11 DC B "O4'" 1 ATOM 207 C "C3'" . DC B 1 5 ? 8.793 15.560 28.581 1.00 4.21 ? 11 DC B "C3'" 1 ATOM 208 O "O3'" . DC B 1 5 ? 9.248 16.780 29.146 1.00 5.39 ? 11 DC B "O3'" 1 ATOM 209 C "C2'" . DC B 1 5 ? 9.983 14.734 28.240 1.00 4.69 ? 11 DC B "C2'" 1 ATOM 210 C "C1'" . DC B 1 5 ? 10.283 14.117 29.609 1.00 4.07 ? 11 DC B "C1'" 1 ATOM 211 N N1 . DC B 1 5 ? 11.033 12.873 29.556 1.00 4.00 ? 11 DC B N1 1 ATOM 212 C C2 . DC B 1 5 ? 12.429 12.952 29.445 1.00 3.73 ? 11 DC B C2 1 ATOM 213 O O2 . DC B 1 5 ? 12.952 14.062 29.410 1.00 4.19 ? 11 DC B O2 1 ATOM 214 N N3 . DC B 1 5 ? 13.144 11.792 29.373 1.00 3.79 ? 11 DC B N3 1 ATOM 215 C C4 . DC B 1 5 ? 12.515 10.620 29.408 1.00 3.79 ? 11 DC B C4 1 ATOM 216 N N4 . DC B 1 5 ? 13.256 9.508 29.359 1.00 4.39 ? 11 DC B N4 1 ATOM 217 C C5 . DC B 1 5 ? 11.092 10.500 29.483 1.00 4.23 ? 11 DC B C5 1 ATOM 218 C C6 . DC B 1 5 ? 10.407 11.680 29.542 1.00 4.64 ? 11 DC B C6 1 ATOM 219 P P . DG B 1 6 ? 8.436 18.145 29.097 1.00 5.77 ? 12 DG B P 1 ATOM 220 O OP1 . DG B 1 6 ? 7.994 18.398 27.706 1.00 6.22 ? 12 DG B OP1 1 ATOM 221 O OP2 . DG B 1 6 ? 9.316 19.127 29.812 1.00 7.26 ? 12 DG B OP2 1 ATOM 222 O "O5'" . DG B 1 6 ? 7.084 17.899 29.888 1.00 5.47 ? 12 DG B "O5'" 1 ATOM 223 C "C5'" . DG B 1 6 ? 7.018 18.030 31.307 1.00 6.21 ? 12 DG B "C5'" 1 ATOM 224 C "C4'" . DG B 1 6 ? 5.674 17.596 31.804 1.00 6.11 ? 12 DG B "C4'" 1 ATOM 225 O "O4'" . DG B 1 6 ? 5.546 16.182 31.675 1.00 4.20 ? 12 DG B "O4'" 1 ATOM 226 C "C3'" . DG B 1 6 ? 5.460 17.867 33.284 1.00 7.09 ? 12 DG B "C3'" 1 ATOM 227 O "O3'" . DG B 1 6 ? 4.085 18.108 33.568 1.00 9.48 ? 12 DG B "O3'" 1 ATOM 228 C "C2'" . DG B 1 6 ? 5.932 16.622 33.974 1.00 5.58 ? 12 DG B "C2'" 1 ATOM 229 C "C1'" . DG B 1 6 ? 5.358 15.590 32.988 1.00 5.02 ? 12 DG B "C1'" 1 ATOM 230 N N9 . DG B 1 6 ? 5.970 14.291 32.979 1.00 4.39 ? 12 DG B N9 1 ATOM 231 C C8 . DG B 1 6 ? 5.255 13.109 32.800 1.00 5.47 ? 12 DG B C8 1 ATOM 232 N N7 . DG B 1 6 ? 6.025 12.072 32.763 1.00 6.09 ? 12 DG B N7 1 ATOM 233 C C5 . DG B 1 6 ? 7.326 12.552 32.844 1.00 4.24 ? 12 DG B C5 1 ATOM 234 C C6 . DG B 1 6 ? 8.586 11.912 32.808 1.00 3.94 ? 12 DG B C6 1 ATOM 235 O O6 . DG B 1 6 ? 8.760 10.671 32.647 1.00 5.59 ? 12 DG B O6 1 ATOM 236 N N1 . DG B 1 6 ? 9.656 12.774 32.950 1.00 3.80 ? 12 DG B N1 1 ATOM 237 C C2 . DG B 1 6 ? 9.529 14.120 33.039 1.00 3.57 ? 12 DG B C2 1 ATOM 238 N N2 . DG B 1 6 ? 10.665 14.793 33.079 1.00 4.49 ? 12 DG B N2 1 ATOM 239 N N3 . DG B 1 6 ? 8.361 14.760 33.077 1.00 3.91 ? 12 DG B N3 1 ATOM 240 C C4 . DG B 1 6 ? 7.308 13.928 32.981 1.00 3.86 ? 12 DG B C4 1 HETATM 241 N N1 . SPM C 2 . ? 23.624 18.368 26.830 1.00 4.03 ? 13 SPM A N1 1 HETATM 242 C C2 . SPM C 2 . ? 23.504 17.015 26.311 1.00 4.10 ? 13 SPM A C2 1 HETATM 243 C C3 . SPM C 2 . ? 22.295 16.903 25.390 1.00 4.29 ? 13 SPM A C3 1 HETATM 244 C C4 . SPM C 2 . ? 22.001 15.493 24.854 1.00 4.45 ? 13 SPM A C4 1 HETATM 245 N N5 . SPM C 2 . ? 23.082 14.973 23.980 1.00 4.04 ? 13 SPM A N5 1 HETATM 246 C C6 . SPM C 2 . ? 22.599 13.803 23.155 1.00 4.55 ? 13 SPM A C6 1 HETATM 247 C C7 . SPM C 2 . ? 23.674 13.174 22.328 1.00 8.90 ? 13 SPM A C7 1 HETATM 248 C C8 . SPM C 2 . ? 23.106 12.211 21.274 1.00 6.92 ? 13 SPM A C8 1 HETATM 249 C C9 . SPM C 2 . ? 24.211 11.608 20.482 1.00 7.60 ? 13 SPM A C9 1 HETATM 250 N N10 . SPM C 2 . ? 23.679 10.761 19.324 1.00 6.15 ? 13 SPM A N10 1 HETATM 251 C C11 . SPM C 2 . ? 24.749 10.378 18.342 1.00 10.73 ? 13 SPM A C11 1 HETATM 252 C C12 . SPM C 2 . ? 24.217 9.299 17.357 1.00 8.85 ? 13 SPM A C12 1 HETATM 253 C C13 . SPM C 2 . ? 25.397 8.850 16.450 1.00 9.57 ? 13 SPM A C13 1 HETATM 254 N N14 . SPM C 2 . ? 25.022 7.763 15.504 1.00 9.45 ? 13 SPM A N14 1 HETATM 255 O O . HOH D 3 . ? 16.969 17.142 30.382 1.00 5.58 ? 100 HOH A O 1 HETATM 256 O O . HOH D 3 . ? 13.570 25.535 17.368 1.00 5.81 ? 101 HOH A O 1 HETATM 257 O O . HOH D 3 . ? 23.545 16.969 22.119 1.00 6.83 ? 103 HOH A O 1 HETATM 258 O O . HOH D 3 . ? 22.646 20.894 30.466 1.00 7.82 ? 104 HOH A O 1 HETATM 259 O O . HOH D 3 . ? 11.707 6.525 32.208 1.00 7.57 ? 105 HOH A O 1 HETATM 260 O O . HOH D 3 . ? 17.128 8.370 31.398 1.00 9.99 ? 110 HOH A O 1 HETATM 261 O O . HOH D 3 . ? 13.339 16.391 27.954 1.00 7.04 ? 111 HOH A O 1 HETATM 262 O O . HOH D 3 . ? 27.568 7.887 14.194 1.00 10.39 ? 112 HOH A O 1 HETATM 263 O O . HOH D 3 . ? 14.474 18.161 29.792 1.00 13.65 ? 115 HOH A O 1 HETATM 264 O O . HOH D 3 . ? 22.037 19.459 18.285 1.00 17.86 ? 116 HOH A O 1 HETATM 265 O O . HOH D 3 . ? 13.981 19.745 23.345 1.00 14.58 ? 117 HOH A O 1 HETATM 266 O O . HOH D 3 . ? 22.389 14.961 36.699 1.00 10.54 ? 118 HOH A O 1 HETATM 267 O O . HOH D 3 . ? 23.433 9.331 13.767 1.00 8.55 ? 119 HOH A O 1 HETATM 268 O O . HOH D 3 . ? 9.306 25.101 11.873 1.00 11.13 ? 120 HOH A O 1 HETATM 269 O O . HOH D 3 . ? 9.997 19.892 22.902 1.00 16.39 ? 121 HOH A O 1 HETATM 270 O O . HOH D 3 . ? 11.339 17.891 16.407 1.00 12.99 ? 122 HOH A O 1 HETATM 271 O O . HOH D 3 . ? 12.455 21.658 22.432 1.00 17.03 ? 124 HOH A O 1 HETATM 272 O O . HOH D 3 . ? 15.915 27.478 18.548 1.00 10.99 ? 128 HOH A O 1 HETATM 273 O O . HOH D 3 . ? 18.894 21.981 17.514 1.00 15.53 ? 131 HOH A O 1 HETATM 274 O O . HOH D 3 . ? 18.106 24.588 17.912 1.00 17.89 ? 132 HOH A O 1 HETATM 275 O O . HOH D 3 . ? 17.967 24.771 15.088 1.00 14.05 ? 145 HOH A O 1 HETATM 276 O O . HOH D 3 . ? 20.489 9.228 34.787 1.00 20.87 ? 147 HOH A O 1 HETATM 277 O O . HOH E 3 . ? 9.516 14.953 24.977 1.00 6.07 ? 102 HOH B O 1 HETATM 278 O O . HOH E 3 . ? 7.835 9.730 30.150 1.00 11.29 ? 106 HOH B O 1 HETATM 279 O O . HOH E 3 . ? 10.752 17.780 32.031 1.00 11.06 ? 107 HOH B O 1 HETATM 280 O O . HOH E 3 . ? 9.236 17.694 25.376 1.00 12.23 ? 109 HOH B O 1 HETATM 281 O O . HOH E 3 . ? 21.042 8.418 12.970 1.00 9.57 ? 113 HOH B O 1 HETATM 282 O O . HOH E 3 . ? 22.414 18.410 15.669 1.00 9.08 ? 114 HOH B O 1 HETATM 283 O O . HOH E 3 . ? 5.356 10.743 28.991 1.00 22.06 ? 123 HOH B O 1 HETATM 284 O O . HOH E 3 . ? 3.452 18.718 36.150 1.00 16.41 ? 125 HOH B O 1 HETATM 285 O O . HOH E 3 . ? 13.422 12.374 17.509 1.00 23.19 ? 129 HOH B O 1 HETATM 286 O O . HOH E 3 . ? 1.866 19.226 32.429 1.00 22.00 ? 133 HOH B O 1 HETATM 287 O O . HOH E 3 . ? 10.169 8.740 19.105 1.00 18.59 ? 134 HOH B O 1 HETATM 288 O O . HOH E 3 . ? 2.765 21.418 32.674 1.00 11.68 ? 135 HOH B O 1 HETATM 289 O O . HOH E 3 . ? 2.766 11.833 25.825 1.00 18.44 ? 136 HOH B O 1 HETATM 290 O O . HOH E 3 . ? 13.975 5.234 18.545 1.00 18.81 ? 149 HOH B O 1 HETATM 291 O O . HOH E 3 . ? 15.447 10.209 11.236 1.00 14.54 ? 157 HOH B O 1 HETATM 292 O O . HOH E 3 . ? 9.076 21.506 30.943 1.00 13.25 ? 165 HOH B O 1 HETATM 293 O O . HOH E 3 . ? 17.112 8.604 24.157 1.00 25.59 ? 173 HOH B O 1 HETATM 294 O O . HOH E 3 . ? 13.153 18.596 32.476 1.00 20.16 ? 191 HOH B O 1 #