0.009870
0.000000
0.000000
0.000000
0.009870
0.000000
0.000000
0.000000
0.004076
0.00000
0.00000
0.00000
Leonard, P.M.
Smits, S.H.J.
Sedelnikova, S.E.
Brinkman, A.B.
de Vos, W.M.
van der Oost, J.
Rice, D.W.
Rafferty, J.B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
32
90.00
90.00
90.00
101.318
101.318
245.361
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
O
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
N
N
108
N
C
N
109
N
C
N
110
N
O
N
111
N
O
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
N
N
118
S
C
N
119
N
C
N
120
N
O
N
121
N
C
Y
122
N
C
Y
123
N
N
Y
124
N
C
Y
125
N
C
Y
126
N
N
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
S
C
N
143
N
C
N
144
N
C
N
145
N
C
N
146
N
O
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
C
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
N
N
183
S
C
N
184
N
C
N
185
N
O
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
N
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
N
N
208
S
C
N
209
N
C
N
210
N
O
N
211
N
C
N
212
N
C
N
213
N
S
N
214
N
C
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
Y
232
N
C
Y
233
N
C
Y
234
N
C
Y
235
N
C
Y
236
N
C
Y
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
N
255
N
C
N
256
N
C
N
257
N
O
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
N
N
268
S
C
N
269
N
C
N
270
N
O
N
271
N
C
N
272
N
O
N
273
N
O
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
N
N
282
S
C
N
283
N
C
N
284
N
O
N
285
R
C
N
286
N
O
N
287
N
C
N
288
N
O
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
N
N
299
S
C
N
300
N
C
N
301
N
O
N
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
N
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
Y
121
N
sing
Y
122
N
doub
Y
123
N
doub
N
124
N
sing
Y
125
N
sing
N
126
N
sing
Y
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
Y
227
N
doub
Y
228
N
sing
Y
229
N
sing
N
230
N
sing
Y
231
N
doub
N
232
N
sing
Y
233
N
doub
N
234
N
sing
Y
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
doub
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
Y
296
N
doub
Y
297
N
sing
Y
298
N
sing
N
299
N
sing
Y
300
N
doub
Y
301
N
sing
Y
302
N
sing
N
303
N
sing
Y
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
doub
N
308
N
sing
Y
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
Y
324
N
doub
Y
325
N
sing
Y
326
N
sing
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
UK
EMBO J.
EMJODG
0897
0261-4189
20
990
997
10.1093/emboj/20.5.990
11230123
Crystal structure of the Lrp-like transcriptional regulator from the archaeon Pyrococcus furiosus.
2001
10.2210/pdb1i1g/pdb
pdb_00001i1g
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
1999-09-04
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.488
1.0
PX7.2
SRS
1.488
SYNCHROTRON
SRS BEAMLINE PX7.2
15917.790
TRANSCRIPTIONAL REGULATOR LRPA
2
man
polymer
no
no
MIDERDKIILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEKGIIEGYTIKINPKKLGYSLVTITGVDTKPEKLFEV
AEKLKEYDFVKELYLSSGDHMIMAVIWAKDGEDLAEIISNKIGKIEGVTKVCPAIILEKLK
MIDERDKIILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEKGIIEGYTIKINPKKLGYSLVTITGVDTKPEKLFEV
AEKLKEYDFVKELYLSSGDHMIMAVIWAKDGEDLAEIISNKIGKIEGVTKVCPAIILEKLK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Pyrococcus
Escherichia
sample
2261
Pyrococcus furiosus
562
Escherichia coli
1
4.94
75.12
VAPOR DIFFUSION, HANGING DROP
6
ammonium sulphate, sodium citrate, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 290K
290
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
1
0
2002-02-06
1
1
2008-04-27
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
BIOMOLECULE: 1
THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT
WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR
INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S).
AT PRESENT IT IS UNCLEAR WHETHER THE BIOLOGICAL UNIT
IS A DIMER OR OCTAMER. COORDINATES FOR A COMPLETE
BIOLOGICAL DIMER CAN BE GENERATED BY APPLYING BIOMT
TRANSFORMATIONS ONE AND FOUR LISTED IN REMARK 350 TO
SUBUNIT A IN THE ASYMMETRIC UNIT, OR BY APPLYING
BIOMT TRANSFORMATIONS ONE AND THREE TO SUBUNIT B.
COORDINATES FOR A COMPLETE BIOLOGICAL OCTAMER CAN BE
GENERATED BY APPLYING ALL FOUR BIOMT TRANSFORMATIONS
TO SUBUNITS A AND B IN THE ASYMMETRIC UNIT.
RCSB
Y
RCSB
2001-02-01
REL
REL
n
1
1
A
ILE
2
n
2
ILE
2
A
ASP
3
n
3
ASP
3
A
GLU
4
n
4
GLU
4
A
ARG
5
n
5
ARG
5
A
ASP
6
n
6
ASP
6
A
LYS
7
n
7
LYS
7
A
ILE
8
n
8
ILE
8
A
ILE
9
n
9
ILE
9
A
LEU
10
n
10
LEU
10
A
GLU
11
n
11
GLU
11
A
ILE
12
n
12
ILE
12
A
LEU
13
n
13
LEU
13
A
GLU
14
n
14
GLU
14
A
ALA
15
n
15
LYS
15
A
ASP
16
n
16
ASP
16
A
ALA
17
n
17
ALA
17
A
ARG
18
n
18
ARG
18
A
THR
19
n
19
THR
19
A
PRO
20
n
20
PRO
20
A
PHE
21
n
21
PHE
21
A
THR
22
n
22
THR
22
A
GLU
23
n
23
GLU
23
A
ILE
24
n
24
ILE
24
A
ALA
25
n
25
ALA
25
A
ALA
26
n
26
LYS
26
A
LYS
27
n
27
LYS
27
A
LEU
28
n
28
LEU
28
A
GLY
29
n
29
GLY
29
A
ILE
30
n
30
ILE
30
A
SER
31
n
31
SER
31
A
GLU
32
n
32
GLU
32
A
THR
33
n
33
THR
33
A
ALA
34
n
34
ALA
34
A
VAL
35
n
35
VAL
35
A
ALA
36
n
36
ARG
36
A
ALA
37
n
37
LYS
37
A
ARG
38
n
38
ARG
38
A
VAL
39
n
39
VAL
39
A
ALA
40
n
40
LYS
40
A
ALA
41
n
41
ALA
41
A
LEU
42
n
42
LEU
42
A
GLU
43
n
43
GLU
43
A
GLU
44
n
44
GLU
44
A
LYS
45
n
45
LYS
45
A
GLY
46
n
46
GLY
46
A
ILE
47
n
47
ILE
47
A
ILE
48
n
48
ILE
48
A
GLU
49
n
49
GLU
49
A
GLY
50
n
50
GLY
50
A
TYR
51
n
51
TYR
51
A
THR
52
n
52
THR
52
A
ILE
53
n
53
ILE
53
A
LYS
54
n
54
LYS
54
A
ILE
55
n
55
ILE
55
A
ASN
56
n
56
ASN
56
A
PRO
57
n
57
PRO
57
A
ALA
58
n
58
LYS
58
A
LYS
59
n
59
LYS
59
A
LEU
60
n
60
LEU
60
A
GLY
61
n
61
GLY
61
A
TYR
62
n
62
TYR
62
A
SER
63
n
63
SER
63
A
LEU
64
n
64
LEU
64
A
VAL
65
n
65
VAL
65
A
THR
66
n
66
THR
66
A
ILE
67
n
67
ILE
67
A
THR
68
n
68
THR
68
A
GLY
69
n
69
GLY
69
A
VAL
70
n
70
VAL
70
A
ASP
71
n
71
ASP
71
A
THR
72
n
72
THR
72
A
LYS
73
n
73
LYS
73
A
PRO
74
n
74
PRO
74
A
GLU
75
n
75
GLU
75
A
LYS
76
n
76
LYS
76
A
LEU
77
n
77
LEU
77
A
PHE
78
n
78
PHE
78
A
GLU
79
n
79
GLU
79
A
VAL
80
n
80
VAL
80
A
ALA
81
n
81
ALA
81
A
GLU
82
n
82
GLU
82
A
LYS
83
n
83
LYS
83
A
LEU
84
n
84
LEU
84
A
LYS
85
n
85
LYS
85
A
ALA
86
n
86
GLU
86
A
TYR
87
n
87
TYR
87
A
ASP
88
n
88
ASP
88
A
PHE
89
n
89
PHE
89
A
VAL
90
n
90
VAL
90
A
LYS
91
n
91
LYS
91
A
GLU
92
n
92
GLU
92
A
LEU
93
n
93
LEU
93
A
TYR
94
n
94
TYR
94
A
LEU
95
n
95
LEU
95
A
SER
96
n
96
SER
96
A
SER
97
n
97
SER
97
A
GLY
98
n
98
GLY
98
A
ASP
99
n
99
ASP
99
A
HIS
100
n
100
HIS
100
A
MET
101
n
101
MET
101
A
ILE
102
n
102
ILE
102
A
MET
103
n
103
MET
103
A
ALA
104
n
104
ALA
104
A
VAL
105
n
105
VAL
105
A
ILE
106
n
106
ILE
106
A
TRP
107
n
107
TRP
107
A
ALA
108
n
108
ALA
108
A
LYS
109
n
109
LYS
109
A
ASP
110
n
110
ASP
110
A
GLY
111
n
111
GLY
111
A
ALA
112
n
112
GLU
112
A
ASP
113
n
113
ASP
113
A
LEU
114
n
114
LEU
114
A
ALA
115
n
115
ALA
115
A
GLU
116
n
116
GLU
116
A
ILE
117
n
117
ILE
117
A
ILE
118
n
118
ILE
118
A
SER
119
n
119
SER
119
A
ASN
120
n
120
ASN
120
A
LYS
121
n
121
LYS
121
A
ILE
122
n
122
ILE
122
A
GLY
123
n
123
GLY
123
A
LYS
124
n
124
LYS
124
A
ILE
125
n
125
ILE
125
A
ALA
126
n
126
GLU
126
A
GLY
127
n
127
GLY
127
A
VAL
128
n
128
VAL
128
A
THR
129
n
129
THR
129
A
LYS
130
n
130
LYS
130
A
VAL
131
n
131
VAL
131
A
CYS
132
n
132
CYS
132
A
PRO
133
n
133
PRO
133
A
ALA
134
n
134
ALA
134
A
ILE
135
n
135
ILE
135
A
ILE
136
n
136
ILE
136
A
LEU
137
n
137
LEU
137
A
GLU
138
n
138
GLU
138
A
LYS
139
n
139
LYS
139
A
LEU
140
n
140
LEU
140
A
LYS
141
n
141
LYS
141
A
n
1
1
B
ILE
2
n
2
ILE
2
B
ASP
3
n
3
ASP
3
B
GLU
4
n
4
GLU
4
B
ARG
5
n
5
ARG
5
B
ASP
6
n
6
ASP
6
B
LYS
7
n
7
LYS
7
B
ILE
8
n
8
ILE
8
B
ILE
9
n
9
ILE
9
B
LEU
10
n
10
LEU
10
B
GLU
11
n
11
GLU
11
B
ILE
12
n
12
ILE
12
B
LEU
13
n
13
LEU
13
B
GLU
14
n
14
GLU
14
B
ALA
15
n
15
LYS
15
B
ASP
16
n
16
ASP
16
B
ALA
17
n
17
ALA
17
B
ARG
18
n
18
ARG
18
B
THR
19
n
19
THR
19
B
PRO
20
n
20
PRO
20
B
PHE
21
n
21
PHE
21
B
THR
22
n
22
THR
22
B
GLU
23
n
23
GLU
23
B
ILE
24
n
24
ILE
24
B
ALA
25
n
25
ALA
25
B
ALA
26
n
26
LYS
26
B
LYS
27
n
27
LYS
27
B
LEU
28
n
28
LEU
28
B
GLY
29
n
29
GLY
29
B
ILE
30
n
30
ILE
30
B
SER
31
n
31
SER
31
B
GLU
32
n
32
GLU
32
B
THR
33
n
33
THR
33
B
ALA
34
n
34
ALA
34
B
VAL
35
n
35
VAL
35
B
ALA
36
n
36
ARG
36
B
ALA
37
n
37
LYS
37
B
ARG
38
n
38
ARG
38
B
VAL
39
n
39
VAL
39
B
ALA
40
n
40
LYS
40
B
ALA
41
n
41
ALA
41
B
LEU
42
n
42
LEU
42
B
GLU
43
n
43
GLU
43
B
GLU
44
n
44
GLU
44
B
LYS
45
n
45
LYS
45
B
GLY
46
n
46
GLY
46
B
ILE
47
n
47
ILE
47
B
ILE
48
n
48
ILE
48
B
GLU
49
n
49
GLU
49
B
GLY
50
n
50
GLY
50
B
TYR
51
n
51
TYR
51
B
THR
52
n
52
THR
52
B
ILE
53
n
53
ILE
53
B
LYS
54
n
54
LYS
54
B
ILE
55
n
55
ILE
55
B
ASN
56
n
56
ASN
56
B
PRO
57
n
57
PRO
57
B
ALA
58
n
58
LYS
58
B
LYS
59
n
59
LYS
59
B
LEU
60
n
60
LEU
60
B
GLY
61
n
61
GLY
61
B
TYR
62
n
62
TYR
62
B
SER
63
n
63
SER
63
B
LEU
64
n
64
LEU
64
B
VAL
65
n
65
VAL
65
B
THR
66
n
66
THR
66
B
ILE
67
n
67
ILE
67
B
THR
68
n
68
THR
68
B
GLY
69
n
69
GLY
69
B
VAL
70
n
70
VAL
70
B
ASP
71
n
71
ASP
71
B
THR
72
n
72
THR
72
B
LYS
73
n
73
LYS
73
B
PRO
74
n
74
PRO
74
B
GLU
75
n
75
GLU
75
B
LYS
76
n
76
LYS
76
B
LEU
77
n
77
LEU
77
B
PHE
78
n
78
PHE
78
B
GLU
79
n
79
GLU
79
B
VAL
80
n
80
VAL
80
B
ALA
81
n
81
ALA
81
B
GLU
82
n
82
GLU
82
B
LYS
83
n
83
LYS
83
B
LEU
84
n
84
LEU
84
B
LYS
85
n
85
LYS
85
B
ALA
86
n
86
GLU
86
B
TYR
87
n
87
TYR
87
B
ASP
88
n
88
ASP
88
B
PHE
89
n
89
PHE
89
B
VAL
90
n
90
VAL
90
B
LYS
91
n
91
LYS
91
B
GLU
92
n
92
GLU
92
B
LEU
93
n
93
LEU
93
B
TYR
94
n
94
TYR
94
B
LEU
95
n
95
LEU
95
B
SER
96
n
96
SER
96
B
SER
97
n
97
SER
97
B
GLY
98
n
98
GLY
98
B
ASP
99
n
99
ASP
99
B
HIS
100
n
100
HIS
100
B
MET
101
n
101
MET
101
B
ILE
102
n
102
ILE
102
B
MET
103
n
103
MET
103
B
ALA
104
n
104
ALA
104
B
VAL
105
n
105
VAL
105
B
ILE
106
n
106
ILE
106
B
TRP
107
n
107
TRP
107
B
ALA
108
n
108
ALA
108
B
LYS
109
n
109
LYS
109
B
ASP
110
n
110
ASP
110
B
GLY
111
n
111
GLY
111
B
ALA
112
n
112
GLU
112
B
ASP
113
n
113
ASP
113
B
LEU
114
n
114
LEU
114
B
ALA
115
n
115
ALA
115
B
GLU
116
n
116
GLU
116
B
ILE
117
n
117
ILE
117
B
ILE
118
n
118
ILE
118
B
SER
119
n
119
SER
119
B
ASN
120
n
120
ASN
120
B
LYS
121
n
121
LYS
121
B
ILE
122
n
122
ILE
122
B
GLY
123
n
123
GLY
123
B
LYS
124
n
124
LYS
124
B
ILE
125
n
125
ILE
125
B
ALA
126
n
126
GLU
126
B
GLY
127
n
127
GLY
127
B
VAL
128
n
128
VAL
128
B
THR
129
n
129
THR
129
B
LYS
130
n
130
LYS
130
B
VAL
131
n
131
VAL
131
B
CYS
132
n
132
CYS
132
B
PRO
133
n
133
PRO
133
B
ALA
134
n
134
ALA
134
B
ILE
135
n
135
ILE
135
B
ILE
136
n
136
ILE
136
B
LEU
137
n
137
LEU
137
B
GLU
138
n
138
GLU
138
B
LYS
139
n
139
LYS
139
B
LEU
140
n
140
LEU
140
B
LYS
141
n
141
LYS
141
B
author_and_software_defined_assembly
PISA,PQS
8
octameric
27330
-186
47810
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_555
-y,-x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
10_555
-x,-y,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
15_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
91
A
N
LYS
91
A
O
VAL
105
A
O
VAL
105
A
N
ALA
108
A
N
ALA
108
A
O
LEU
64
A
O
LEU
64
A
O
ASP
71
A
O
ASP
71
A
N
THR
129
A
N
THR
129
B
N
TYR
94
B
N
TYR
94
B
O
MET
103
B
O
MET
103
B
O
ALA
108
B
O
ALA
108
B
N
LEU
64
B
N
LEU
64
B
O
ASP
71
B
O
ASP
71
B
N
THR
129
B
N
THR
129
1
A
CG
LYS
15
A
CG
LYS
15
1
Y
1
A
CD
LYS
15
A
CD
LYS
15
1
Y
1
A
CE
LYS
15
A
CE
LYS
15
1
Y
1
A
NZ
LYS
15
A
NZ
LYS
15
1
Y
1
A
CG
LYS
26
A
CG
LYS
26
1
Y
1
A
CD
LYS
26
A
CD
LYS
26
1
Y
1
A
CE
LYS
26
A
CE
LYS
26
1
Y
1
A
NZ
LYS
26
A
NZ
LYS
26
1
Y
1
A
CG
ARG
36
A
CG
ARG
36
1
Y
1
A
CD
ARG
36
A
CD
ARG
36
1
Y
1
A
NE
ARG
36
A
NE
ARG
36
1
Y
1
A
CZ
ARG
36
A
CZ
ARG
36
1
Y
1
A
NH1
ARG
36
A
NH1
ARG
36
1
Y
1
A
NH2
ARG
36
A
NH2
ARG
36
1
Y
1
A
CG
LYS
37
A
CG
LYS
37
1
Y
1
A
CD
LYS
37
A
CD
LYS
37
1
Y
1
A
CE
LYS
37
A
CE
LYS
37
1
Y
1
A
NZ
LYS
37
A
NZ
LYS
37
1
Y
1
A
CG
LYS
40
A
CG
LYS
40
1
Y
1
A
CD
LYS
40
A
CD
LYS
40
1
Y
1
A
CE
LYS
40
A
CE
LYS
40
1
Y
1
A
NZ
LYS
40
A
NZ
LYS
40
1
Y
1
A
CG
LYS
58
A
CG
LYS
58
1
Y
1
A
CD
LYS
58
A
CD
LYS
58
1
Y
1
A
CE
LYS
58
A
CE
LYS
58
1
Y
1
A
NZ
LYS
58
A
NZ
LYS
58
1
Y
1
A
CG
GLU
86
A
CG
GLU
86
1
Y
1
A
CD
GLU
86
A
CD
GLU
86
1
Y
1
A
OE1
GLU
86
A
OE1
GLU
86
1
Y
1
A
OE2
GLU
86
A
OE2
GLU
86
1
Y
1
A
CG
GLU
112
A
CG
GLU
112
1
Y
1
A
CD
GLU
112
A
CD
GLU
112
1
Y
1
A
OE1
GLU
112
A
OE1
GLU
112
1
Y
1
A
OE2
GLU
112
A
OE2
GLU
112
1
Y
1
A
CG
GLU
126
A
CG
GLU
126
1
Y
1
A
CD
GLU
126
A
CD
GLU
126
1
Y
1
A
OE1
GLU
126
A
OE1
GLU
126
1
Y
1
A
OE2
GLU
126
A
OE2
GLU
126
1
Y
1
B
CG
LYS
15
B
CG
LYS
15
1
Y
1
B
CD
LYS
15
B
CD
LYS
15
1
Y
1
B
CE
LYS
15
B
CE
LYS
15
1
Y
1
B
NZ
LYS
15
B
NZ
LYS
15
1
Y
1
B
CG
LYS
26
B
CG
LYS
26
1
Y
1
B
CD
LYS
26
B
CD
LYS
26
1
Y
1
B
CE
LYS
26
B
CE
LYS
26
1
Y
1
B
NZ
LYS
26
B
NZ
LYS
26
1
Y
1
B
CG
ARG
36
B
CG
ARG
36
1
Y
1
B
CD
ARG
36
B
CD
ARG
36
1
Y
1
B
NE
ARG
36
B
NE
ARG
36
1
Y
1
B
CZ
ARG
36
B
CZ
ARG
36
1
Y
1
B
NH1
ARG
36
B
NH1
ARG
36
1
Y
1
B
NH2
ARG
36
B
NH2
ARG
36
1
Y
1
B
CG
LYS
37
B
CG
LYS
37
1
Y
1
B
CD
LYS
37
B
CD
LYS
37
1
Y
1
B
CE
LYS
37
B
CE
LYS
37
1
Y
1
B
NZ
LYS
37
B
NZ
LYS
37
1
Y
1
B
CG
LYS
40
B
CG
LYS
40
1
Y
1
B
CD
LYS
40
B
CD
LYS
40
1
Y
1
B
CE
LYS
40
B
CE
LYS
40
1
Y
1
B
NZ
LYS
40
B
NZ
LYS
40
1
Y
1
B
CG
LYS
58
B
CG
LYS
58
1
Y
1
B
CD
LYS
58
B
CD
LYS
58
1
Y
1
B
CE
LYS
58
B
CE
LYS
58
1
Y
1
B
NZ
LYS
58
B
NZ
LYS
58
1
Y
1
B
CG
GLU
86
B
CG
GLU
86
1
Y
1
B
CD
GLU
86
B
CD
GLU
86
1
Y
1
B
OE1
GLU
86
B
OE1
GLU
86
1
Y
1
B
OE2
GLU
86
B
OE2
GLU
86
1
Y
1
B
CG
GLU
112
B
CG
GLU
112
1
Y
1
B
CD
GLU
112
B
CD
GLU
112
1
Y
1
B
OE1
GLU
112
B
OE1
GLU
112
1
Y
1
B
OE2
GLU
112
B
OE2
GLU
112
1
Y
1
B
CG
GLU
126
B
CG
GLU
126
1
Y
1
B
CD
GLU
126
B
CD
GLU
126
1
Y
1
B
OE1
GLU
126
B
OE1
GLU
126
1
Y
1
B
OE2
GLU
126
B
OE2
GLU
126
1
Y
1
A
MET
1
A
MET
1
1
Y
1
B
MET
1
B
MET
1
1
Y
1
A
GLU
75
12.31
1
A
VAL
90
10.66
1
A
GLU
92
11.77
1
A
ILE
102
10.36
1
A
SER
119
12.53
1
B
GLU
23
-12.27
1
B
THR
33
-10.67
1
B
LYS
37
-10.84
1
B
ILE
47
-12.51
1
B
ASP
88
-11.13
1
B
GLU
92
12.14
1
B
ASP
113
-10.23
1
-13.25
2.20
117.20
103.95
A
A
A
CA
C
N
ASP
ASP
GLU
3
3
4
Y
1
19.20
1.60
122.70
141.90
A
A
A
O
C
N
ASP
ASP
GLU
3
3
4
Y
1
15.87
2.30
115.30
131.17
A
A
A
CA
CB
CG
LEU
LEU
LEU
13
13
13
N
1
-9.50
1.40
110.10
100.60
A
A
A
N
CA
CB
ALA
ALA
ALA
34
34
34
N
1
-3.90
0.60
121.00
117.10
A
A
A
CB
CG
CD2
TYR
TYR
TYR
62
62
62
N
1
13.95
2.30
115.30
129.25
A
A
A
CA
CB
CG
LEU
LEU
LEU
64
64
64
N
1
5.94
0.90
118.30
124.24
A
A
A
CB
CG
OD1
ASP
ASP
ASP
110
110
110
N
1
-14.40
2.10
120.10
105.70
A
A
A
CA
C
O
LEU
LEU
LEU
137
137
137
N
1
11.71
1.40
123.60
135.31
B
B
B
CD
NE
CZ
ARG
ARG
ARG
5
5
5
N
1
-3.70
0.50
120.30
116.60
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
5
5
5
N
1
3.63
0.50
120.30
123.93
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
38
38
38
N
1
8.82
1.40
110.10
118.92
B
B
B
N
CA
CB
ALA
ALA
ALA
41
41
41
N
1
14.97
2.20
113.40
128.37
B
B
B
CA
CB
CG
GLU
GLU
GLU
44
44
44
N
1
18.91
2.20
113.40
132.31
B
B
B
CA
CB
CG
GLU
GLU
GLU
75
75
75
N
1
19.89
2.00
110.40
130.29
B
B
B
CB
CA
C
GLU
GLU
GLU
92
92
92
N
1
8.89
0.90
118.30
127.19
B
B
B
CB
CG
OD1
ASP
ASP
ASP
99
99
99
N
1
-5.66
0.90
118.30
112.64
B
B
B
CB
CG
OD2
ASP
ASP
ASP
99
99
99
N
1
8.22
0.90
118.30
126.52
B
B
B
CB
CG
OD1
ASP
ASP
ASP
113
113
113
N
1
8.96
1.40
110.10
119.06
B
B
B
N
CA
CB
ALA
ALA
ALA
134
134
134
N
1
A
A
N
CA
ASP
ASP
3
3
-0.141
0.020
1.459
1.318
N
1
A
A
C
O
ASP
ASP
3
3
0.130
0.019
1.229
1.359
N
1
A
ASP
3
-42.84
150.82
1
A
ILE
30
-91.25
-154.34
1
A
ARG
36
-58.78
-74.55
1
A
GLU
75
-41.87
-11.42
1
A
GLU
92
-179.29
134.74
1
A
GLU
126
-38.75
123.68
1
A
LYS
130
176.72
125.13
1
B
PRO
20
-35.59
142.41
1
B
LEU
64
-118.20
76.43
1
B
LYS
121
-95.47
-62.10
0.3820000
0.3130000
0.3160000
0.3160000
2.9
20
134
13354
12686
Random
1
0
0
MIR
Engh & Huber
2.9
20
0
2138
0
0
2138
73.6
2.9
20
1I1G
13809
13809
0
0
0.0650000
1
14.7
2.2
94.7
0.3460000
2.9
2.97
1
1.9
94.7
phasing
MLPHARE
refinement
REFMAC
data reduction
DENZO
data scaling
SCALEPACK
CRYSTAL STRUCTURE OF THE LRP-LIKE TRANSCRIPTIONAL REGULATOR FROM THE ARCHAEON PYROCOCCUS FURIOSUS
1
N
N
1
N
N
A
GLU
4
A
GLU
4
HELX_P
A
ASP
16
A
ASP
16
1
1
13
A
PRO
20
A
PRO
20
HELX_P
A
GLY
29
A
GLY
29
1
2
10
A
SER
31
A
SER
31
HELX_P
A
GLY
46
A
GLY
46
1
3
16
A
PRO
57
A
PRO
57
HELX_P
A
GLY
61
A
GLY
61
5
4
5
A
LYS
76
A
LYS
76
HELX_P
A
TYR
87
A
TYR
87
1
5
12
A
ASP
110
A
ASP
110
HELX_P
A
LYS
121
A
LYS
121
1
6
12
B
ASP
3
B
ASP
3
HELX_P
B
ASP
16
B
ASP
16
1
7
14
B
PRO
20
B
PRO
20
HELX_P
B
GLY
29
B
GLY
29
1
8
10
B
SER
31
B
SER
31
HELX_P
B
GLY
46
B
GLY
46
1
9
16
B
PRO
57
B
PRO
57
HELX_P
B
GLY
61
B
GLY
61
5
10
5
B
LYS
76
B
LYS
76
HELX_P
B
TYR
87
B
TYR
87
1
11
12
B
ASP
110
B
ASP
110
HELX_P
B
LYS
121
B
LYS
121
1
12
12
TRANSCRIPTION
helix-turn-helix, Lrp/AsnC family, Pyrococcus furiosus, transcriptional regulator, TRANSCRIPTION
REG7_PYRFU
UNP
1
1
P42180
MIDERDKIILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEKGIIEGYTIKINPKKLGYSLVTITGVDTKPEKLFEV
AEKLKEYDFVKELYLSSGDHMIMAVIWAKDGEDLAEIISNKIGKIEGVTKVCPAIILEKLK
1
141
1I1G
1
141
P42180
A
1
1
141
1
141
1I1G
1
141
P42180
B
1
1
141
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
90
A
VAL
90
A
LEU
93
A
LEU
93
A
ILE
102
A
ILE
102
A
ALA
108
A
ALA
108
A
LEU
64
A
LEU
64
A
THR
72
A
THR
72
A
VAL
128
A
VAL
128
A
ILE
135
A
ILE
135
B
VAL
90
B
VAL
90
B
LEU
95
B
LEU
95
B
ILE
102
B
ILE
102
B
ALA
108
B
ALA
108
B
LEU
64
B
LEU
64
B
THR
72
B
THR
72
B
VAL
128
B
VAL
128
B
ILE
135
B
ILE
135
98
I 41 2 2