0.007785
0.000000
0.000000
0.000000
0.007785
0.000000
0.000000
0.000000
0.007308
0.00000
0.00000
0.00000
Mihara, H.
Fujii, T.
Kurihara, T.
Hata, Y.
Esaki, N.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
128.459
128.459
136.830
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C4 H5 N O2
99.088
n
(2S)-2-aminobut-3-ynoic acid
2-AMINO-BUT-3-YNOIC ACID; 2-amino-3-butynoic acid
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C8 H10 N O6 P
247.142
PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
C
N
203
N
C
N
204
N
O
N
205
N
O
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
N
N
215
S
C
N
216
N
C
N
217
N
O
N
218
N
C
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
N
N
223
N
O
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
N
N
240
S
C
N
241
N
C
N
242
N
O
N
243
N
C
N
244
N
C
N
245
N
S
N
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
Y
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
N
270
N
O
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
Y
282
N
N
Y
283
N
C
N
284
N
C
Y
285
N
C
N
286
N
O
Y
287
N
C
N
288
N
C
N
289
N
O
Y
290
N
C
Y
291
N
C
N
292
N
C
N
293
N
O
N
294
N
P
N
295
N
O
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
N
N
309
S
C
N
310
N
C
N
311
N
O
N
312
N
C
N
313
N
C
N
314
N
C
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
N
330
N
O
N
331
N
O
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
R
C
N
344
N
O
N
345
N
C
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
N
N
357
S
C
N
358
N
C
N
359
N
O
N
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
N
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
N
394
N
O
N
395
N
O
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
N
N
408
S
C
N
409
N
C
N
410
N
O
N
411
N
C
N
412
N
C
N
413
N
C
N
414
N
O
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
trip
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
doub
Y
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
Y
269
N
doub
Y
270
N
sing
N
271
N
sing
Y
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
Y
277
N
doub
N
278
N
sing
N
279
N
sing
Y
280
N
sing
N
281
N
doub
N
282
N
sing
Y
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
Y
352
N
doub
Y
353
N
sing
Y
354
N
sing
N
355
N
sing
Y
356
N
doub
Y
357
N
sing
Y
358
N
sing
N
359
N
sing
Y
360
N
sing
Y
361
N
doub
N
362
N
sing
Y
363
N
doub
N
364
N
sing
Y
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
doub
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
Y
380
N
doub
Y
381
N
sing
Y
382
N
sing
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
doub
N
387
N
sing
Y
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
doub
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
JA
J.BIOCHEM.(TOKYO)
JOBIAO
0418
0021-924X
131
679
685
11983074
Structure of external aldimine of Escherichia coli CsdB, an IscS/NifS homolog: implications for its specificity toward
selenocysteine.
2002
US
Biochemistry
BICHAW
0033
0006-2960
39
1263
1273
10.1021/bi991732a
Structure of a NifS Homologue: X-ray Structure Analysis of CsdB, An Escherichia coli Counterpart of Mammalian Selenocysteine Lyase
2000
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
274
14768
14772
10.1074/jbc.274.21.14768
A NifS-like Gene, CsdB, Encodes an Escherichia coli Counterpart of Mammalian Selenocysteine Lyase: Gene Cloning, Purification, Characterization and Preliminary X-ray Crystallographic Studies
1999
10.2210/pdb1i29/pdb
pdb_00001i29
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293.15
1
GRAPHITE-MONOCHROMATER
IMAGE PLATE
1998-05-23
RIGAKU RAXIS IIC
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.54180
1.0
1.54180
ROTATING ANODE
RIGAKU RU300
44480.594
CSDB
4.4.1.16
1
man
polymer
99.088
(2S)-2-aminobut-3-ynoic acid
1
syn
non-polymer
247.142
PYRIDOXAL-5'-PHOSPHATE
1
syn
non-polymer
no
no
MIFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI
NARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTL
FDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKE
ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESV
PDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQR
IHRLLG
MIFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI
NARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTL
FDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKE
ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESV
PDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQR
IHRLLG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
CSDB OR SUFS
562
Escherichia coli
562
Escherichia coli
JM109
PLASMID
PUC118
1
VAPOR DIFFUSION, HANGING DROP
6.8
sodium acetate, potassium phosphate, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 298.15K
298.15
software
chem_comp
database_2
entity
pdbx_entity_nonpoly
struct_conn
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Refinement description
Database references
Derived calculations
Structure summary
Data collection
Refinement description
1
0
2003-07-01
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2022-03-02
1
5
2023-08-09
_chem_comp.name
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1C0N: The native CsdB structure
CRYSTAL STRUCTURE OF CSDB COMPLEXED WITH L-ASPARTATE
RCSB
Y
RCSB
2001-02-07
REL
REL
LPG
(2S)-2-aminobut-3-ynoic acid
PLP
PYRIDOXAL-5'-PHOSPHATE
1C0N
PDB ENTRY 1C0N
PDB
experimental model
ALA
460
2
LPG
LPG
460
A
PLP
500
3
PLP
PLP
500
A
n
1
1
A
ALA
2
n
2
ILE
2
A
PHE
3
n
3
PHE
3
A
SER
4
n
4
SER
4
A
VAL
5
n
5
VAL
5
A
ASP
6
n
6
ASP
6
A
ALA
7
n
7
LYS
7
A
VAL
8
n
8
VAL
8
A
ARG
9
n
9
ARG
9
A
ALA
10
n
10
ALA
10
A
ASP
11
n
11
ASP
11
A
PHE
12
n
12
PHE
12
A
PRO
13
n
13
PRO
13
A
VAL
14
n
14
VAL
14
A
LEU
15
n
15
LEU
15
A
SER
16
n
16
SER
16
A
ARG
17
n
17
ARG
17
A
GLU
18
n
18
GLU
18
A
VAL
19
n
19
VAL
19
A
ASN
20
n
20
ASN
20
A
GLY
21
n
21
GLY
21
A
LEU
22
n
22
LEU
22
A
PRO
23
n
23
PRO
23
A
LEU
24
n
24
LEU
24
A
ALA
25
n
25
ALA
25
A
TYR
26
n
26
TYR
26
A
LEU
27
n
27
LEU
27
A
ASP
28
n
28
ASP
28
A
SER
29
n
29
SER
29
A
ALA
30
n
30
ALA
30
A
ALA
31
n
31
ALA
31
A
SER
32
n
32
SER
32
A
ALA
33
n
33
ALA
33
A
GLN
34
n
34
GLN
34
A
LYS
35
n
35
LYS
35
A
PRO
36
n
36
PRO
36
A
SER
37
n
37
SER
37
A
GLN
38
n
38
GLN
38
A
VAL
39
n
39
VAL
39
A
ILE
40
n
40
ILE
40
A
ASP
41
n
41
ASP
41
A
ALA
42
n
42
ALA
42
A
GLU
43
n
43
GLU
43
A
ALA
44
n
44
ALA
44
A
GLU
45
n
45
GLU
45
A
PHE
46
n
46
PHE
46
A
TYR
47
n
47
TYR
47
A
ARG
48
n
48
ARG
48
A
HIS
49
n
49
HIS
49
A
GLY
50
n
50
GLY
50
A
TYR
51
n
51
TYR
51
A
ALA
52
n
52
ALA
52
A
ALA
53
n
53
ALA
53
A
VAL
54
n
54
VAL
54
A
HIS
55
n
55
HIS
55
A
ALA
56
n
56
ARG
56
A
GLY
57
n
57
GLY
57
A
ALA
58
n
58
ILE
58
A
HIS
59
n
59
HIS
59
A
THR
60
n
60
THR
60
A
LEU
61
n
61
LEU
61
A
SER
62
n
62
SER
62
A
ALA
63
n
63
ALA
63
A
GLN
64
n
64
GLN
64
A
ALA
65
n
65
ALA
65
A
THR
66
n
66
THR
66
A
GLU
67
n
67
GLU
67
A
LYS
68
n
68
LYS
68
A
MET
69
n
69
MET
69
A
GLU
70
n
70
GLU
70
A
ASN
71
n
71
ASN
71
A
VAL
72
n
72
VAL
72
A
ARG
73
n
73
ARG
73
A
LYS
74
n
74
LYS
74
A
ARG
75
n
75
ARG
75
A
ALA
76
n
76
ALA
76
A
SER
77
n
77
SER
77
A
LEU
78
n
78
LEU
78
A
PHE
79
n
79
PHE
79
A
ILE
80
n
80
ILE
80
A
ASN
81
n
81
ASN
81
A
ALA
82
n
82
ALA
82
A
ARG
83
n
83
ARG
83
A
SER
84
n
84
SER
84
A
ALA
85
n
85
ALA
85
A
GLU
86
n
86
GLU
86
A
GLU
87
n
87
GLU
87
A
LEU
88
n
88
LEU
88
A
VAL
89
n
89
VAL
89
A
PHE
90
n
90
PHE
90
A
VAL
91
n
91
VAL
91
A
ARG
92
n
92
ARG
92
A
GLY
93
n
93
GLY
93
A
THR
94
n
94
THR
94
A
THR
95
n
95
THR
95
A
GLU
96
n
96
GLU
96
A
GLY
97
n
97
GLY
97
A
ILE
98
n
98
ILE
98
A
ASN
99
n
99
ASN
99
A
LEU
100
n
100
LEU
100
A
VAL
101
n
101
VAL
101
A
ALA
102
n
102
ALA
102
A
ASN
103
n
103
ASN
103
A
SER
104
n
104
SER
104
A
TRP
105
n
105
TRP
105
A
GLY
106
n
106
GLY
106
A
ASN
107
n
107
ASN
107
A
SER
108
n
108
SER
108
A
ASN
109
n
109
ASN
109
A
VAL
110
n
110
VAL
110
A
ARG
111
n
111
ARG
111
A
ALA
112
n
112
ALA
112
A
GLY
113
n
113
GLY
113
A
ASP
114
n
114
ASP
114
A
ASN
115
n
115
ASN
115
A
ILE
116
n
116
ILE
116
A
ILE
117
n
117
ILE
117
A
ILE
118
n
118
ILE
118
A
SER
119
n
119
SER
119
A
GLN
120
n
120
GLN
120
A
MET
121
n
121
MET
121
A
GLU
122
n
122
GLU
122
A
HIS
123
n
123
HIS
123
A
HIS
124
n
124
HIS
124
A
ALA
125
n
125
ALA
125
A
ASN
126
n
126
ASN
126
A
ILE
127
n
127
ILE
127
A
VAL
128
n
128
VAL
128
A
PRO
129
n
129
PRO
129
A
TRP
130
n
130
TRP
130
A
GLN
131
n
131
GLN
131
A
MET
132
n
132
MET
132
A
LEU
133
n
133
LEU
133
A
CYS
134
n
134
CYS
134
A
ALA
135
n
135
ALA
135
A
ARG
136
n
136
ARG
136
A
VAL
137
n
137
VAL
137
A
GLY
138
n
138
GLY
138
A
ALA
139
n
139
ALA
139
A
GLU
140
n
140
GLU
140
A
LEU
141
n
141
LEU
141
A
ARG
142
n
142
ARG
142
A
VAL
143
n
143
VAL
143
A
ILE
144
n
144
ILE
144
A
PRO
145
n
145
PRO
145
A
LEU
146
n
146
LEU
146
A
ASN
147
n
147
ASN
147
A
PRO
148
n
148
PRO
148
A
ASP
149
n
149
ASP
149
A
GLY
150
n
150
GLY
150
A
THR
151
n
151
THR
151
A
LEU
152
n
152
LEU
152
A
GLN
153
n
153
GLN
153
A
LEU
154
n
154
LEU
154
A
GLU
155
n
155
GLU
155
A
THR
156
n
156
THR
156
A
LEU
157
n
157
LEU
157
A
PRO
158
n
158
PRO
158
A
THR
159
n
159
THR
159
A
LEU
160
n
160
LEU
160
A
PHE
161
n
161
PHE
161
A
ASP
162
n
162
ASP
162
A
GLU
163
n
163
GLU
163
A
LYS
164
n
164
LYS
164
A
THR
165
n
165
THR
165
A
ARG
166
n
166
ARG
166
A
LEU
167
n
167
LEU
167
A
LEU
168
n
168
LEU
168
A
ALA
169
n
169
ALA
169
A
ILE
170
n
170
ILE
170
A
THR
171
n
171
THR
171
A
HIS
172
n
172
HIS
172
A
VAL
173
n
173
VAL
173
A
SER
174
n
174
SER
174
A
ASN
175
n
175
ASN
175
A
VAL
176
n
176
VAL
176
A
LEU
177
n
177
LEU
177
A
GLY
178
n
178
GLY
178
A
THR
179
n
179
THR
179
A
GLU
180
n
180
GLU
180
A
ASN
181
n
181
ASN
181
A
PRO
182
n
182
PRO
182
A
LEU
183
n
183
LEU
183
A
ALA
184
n
184
ALA
184
A
GLU
185
n
185
GLU
185
A
MET
186
n
186
MET
186
A
ILE
187
n
187
ILE
187
A
THR
188
n
188
THR
188
A
LEU
189
n
189
LEU
189
A
ALA
190
n
190
ALA
190
A
HIS
191
n
191
HIS
191
A
GLN
192
n
192
GLN
192
A
HIS
193
n
193
HIS
193
A
GLY
194
n
194
GLY
194
A
ALA
195
n
195
ALA
195
A
LYS
196
n
196
LYS
196
A
VAL
197
n
197
VAL
197
A
LEU
198
n
198
LEU
198
A
VAL
199
n
199
VAL
199
A
ASP
200
n
200
ASP
200
A
GLY
201
n
201
GLY
201
A
ALA
202
n
202
ALA
202
A
GLN
203
n
203
GLN
203
A
ALA
204
n
204
ALA
204
A
VAL
205
n
205
VAL
205
A
MET
206
n
206
MET
206
A
HIS
207
n
207
HIS
207
A
HIS
208
n
208
HIS
208
A
PRO
209
n
209
PRO
209
A
VAL
210
n
210
VAL
210
A
ASP
211
n
211
ASP
211
A
VAL
212
n
212
VAL
212
A
GLN
213
n
213
GLN
213
A
ALA
214
n
214
ALA
214
A
LEU
215
n
215
LEU
215
A
ASP
216
n
216
ASP
216
A
CYS
217
n
217
CYS
217
A
ASP
218
n
218
ASP
218
A
PHE
219
n
219
PHE
219
A
TYR
220
n
220
TYR
220
A
VAL
221
n
221
VAL
221
A
PHE
222
n
222
PHE
222
A
SER
223
n
223
SER
223
A
GLY
224
n
224
GLY
224
A
HIS
225
n
225
HIS
225
A
LYS
226
n
226
LYS
226
A
LEU
227
n
227
LEU
227
A
TYR
228
n
228
TYR
228
A
GLY
229
n
229
GLY
229
A
PRO
230
n
230
PRO
230
A
THR
231
n
231
THR
231
A
GLY
232
n
232
GLY
232
A
ILE
233
n
233
ILE
233
A
GLY
234
n
234
GLY
234
A
ILE
235
n
235
ILE
235
A
LEU
236
n
236
LEU
236
A
TYR
237
n
237
TYR
237
A
VAL
238
n
238
VAL
238
A
LYS
239
n
239
LYS
239
A
GLU
240
n
240
GLU
240
A
ALA
241
n
241
ALA
241
A
LEU
242
n
242
LEU
242
A
LEU
243
n
243
LEU
243
A
GLN
244
n
244
GLN
244
A
GLU
245
n
245
GLU
245
A
MET
246
n
246
MET
246
A
PRO
247
n
247
PRO
247
A
PRO
248
n
248
PRO
248
A
TRP
249
n
249
TRP
249
A
GLU
250
n
250
GLU
250
A
GLY
251
n
251
GLY
251
A
GLY
252
n
252
GLY
252
A
GLY
253
n
253
GLY
253
A
SER
254
n
254
SER
254
A
MET
255
n
255
MET
255
A
ILE
256
n
256
ILE
256
A
ALA
257
n
257
ALA
257
A
THR
258
n
258
THR
258
A
VAL
259
n
259
VAL
259
A
SER
260
n
260
SER
260
A
LEU
261
n
261
LEU
261
A
SER
262
n
262
SER
262
A
GLU
263
n
263
GLU
263
A
GLY
264
n
264
GLY
264
A
THR
265
n
265
THR
265
A
THR
266
n
266
THR
266
A
TRP
267
n
267
TRP
267
A
THR
268
n
268
THR
268
A
LYS
269
n
269
LYS
269
A
ALA
270
n
270
ALA
270
A
PRO
271
n
271
PRO
271
A
TRP
272
n
272
TRP
272
A
ARG
273
n
273
ARG
273
A
PHE
274
n
274
PHE
274
A
GLU
275
n
275
GLU
275
A
ALA
276
n
276
ALA
276
A
GLY
277
n
277
GLY
277
A
THR
278
n
278
THR
278
A
PRO
279
n
279
PRO
279
A
ASN
280
n
280
ASN
280
A
THR
281
n
281
THR
281
A
GLY
282
n
282
GLY
282
A
GLY
283
n
283
GLY
283
A
ILE
284
n
284
ILE
284
A
ILE
285
n
285
ILE
285
A
GLY
286
n
286
GLY
286
A
LEU
287
n
287
LEU
287
A
GLY
288
n
288
GLY
288
A
ALA
289
n
289
ALA
289
A
ALA
290
n
290
ALA
290
A
LEU
291
n
291
LEU
291
A
GLU
292
n
292
GLU
292
A
TYR
293
n
293
TYR
293
A
VAL
294
n
294
VAL
294
A
SER
295
n
295
SER
295
A
ALA
296
n
296
ALA
296
A
LEU
297
n
297
LEU
297
A
GLY
298
n
298
GLY
298
A
LEU
299
n
299
LEU
299
A
ASN
300
n
300
ASN
300
A
ASN
301
n
301
ASN
301
A
ILE
302
n
302
ILE
302
A
ALA
303
n
303
ALA
303
A
GLU
304
n
304
GLU
304
A
TYR
305
n
305
TYR
305
A
GLU
306
n
306
GLU
306
A
GLN
307
n
307
GLN
307
A
ASN
308
n
308
ASN
308
A
LEU
309
n
309
LEU
309
A
MET
310
n
310
MET
310
A
HIS
311
n
311
HIS
311
A
TYR
312
n
312
TYR
312
A
ALA
313
n
313
ALA
313
A
LEU
314
n
314
LEU
314
A
SER
315
n
315
SER
315
A
GLN
316
n
316
GLN
316
A
LEU
317
n
317
LEU
317
A
GLU
318
n
318
GLU
318
A
SER
319
n
319
SER
319
A
VAL
320
n
320
VAL
320
A
PRO
321
n
321
PRO
321
A
ASP
322
n
322
ASP
322
A
LEU
323
n
323
LEU
323
A
THR
324
n
324
THR
324
A
LEU
325
n
325
LEU
325
A
TYR
326
n
326
TYR
326
A
GLY
327
n
327
GLY
327
A
PRO
328
n
328
PRO
328
A
GLN
329
n
329
GLN
329
A
ALA
330
n
330
ASN
330
A
ARG
331
n
331
ARG
331
A
LEU
332
n
332
LEU
332
A
GLY
333
n
333
GLY
333
A
VAL
334
n
334
VAL
334
A
ILE
335
n
335
ILE
335
A
ALA
336
n
336
ALA
336
A
PHE
337
n
337
PHE
337
A
ASN
338
n
338
ASN
338
A
LEU
339
n
339
LEU
339
A
GLY
340
n
340
GLY
340
A
ALA
341
n
341
LYS
341
A
HIS
342
n
342
HIS
342
A
HIS
343
n
343
HIS
343
A
ALA
344
n
344
ALA
344
A
TYR
345
n
345
TYR
345
A
ASP
346
n
346
ASP
346
A
VAL
347
n
347
VAL
347
A
GLY
348
n
348
GLY
348
A
SER
349
n
349
SER
349
A
PHE
350
n
350
PHE
350
A
LEU
351
n
351
LEU
351
A
ASP
352
n
352
ASP
352
A
ASN
353
n
353
ASN
353
A
TYR
354
n
354
TYR
354
A
GLY
355
n
355
GLY
355
A
ILE
356
n
356
ILE
356
A
ALA
357
n
357
ALA
357
A
VAL
358
n
358
VAL
358
A
ARG
359
n
359
ARG
359
A
THR
360
n
360
THR
360
A
GLY
361
n
361
GLY
361
A
HIS
362
n
362
HIS
362
A
HIS
363
n
363
HIS
363
A
CYS
364
n
364
CYS
364
A
ALA
365
n
365
ALA
365
A
MET
366
n
366
MET
366
A
PRO
367
n
367
PRO
367
A
LEU
368
n
368
LEU
368
A
MET
369
n
369
MET
369
A
ALA
370
n
370
ALA
370
A
TYR
371
n
371
TYR
371
A
TYR
372
n
372
TYR
372
A
ASN
373
n
373
ASN
373
A
VAL
374
n
374
VAL
374
A
PRO
375
n
375
PRO
375
A
ALA
376
n
376
ALA
376
A
MET
377
n
377
MET
377
A
CYS
378
n
378
CYS
378
A
ARG
379
n
379
ARG
379
A
ALA
380
n
380
ALA
380
A
SER
381
n
381
SER
381
A
LEU
382
n
382
LEU
382
A
ALA
383
n
383
ALA
383
A
MET
384
n
384
MET
384
A
TYR
385
n
385
TYR
385
A
ASN
386
n
386
ASN
386
A
THR
387
n
387
THR
387
A
HIS
388
n
388
HIS
388
A
GLU
389
n
389
GLU
389
A
GLU
390
n
390
GLU
390
A
VAL
391
n
391
VAL
391
A
ASP
392
n
392
ASP
392
A
ARG
393
n
393
ARG
393
A
LEU
394
n
394
LEU
394
A
VAL
395
n
395
VAL
395
A
THR
396
n
396
THR
396
A
GLY
397
n
397
GLY
397
A
LEU
398
n
398
LEU
398
A
GLN
399
n
399
GLN
399
A
ARG
400
n
400
ARG
400
A
ILE
401
n
401
ILE
401
A
HIS
402
n
402
HIS
402
A
ARG
403
n
403
ARG
403
A
LEU
404
n
404
LEU
404
A
LEU
405
n
405
LEU
405
A
GLY
406
n
406
GLY
406
A
author_and_software_defined_assembly
PISA,PQS
2
dimeric
7720
-39
26760
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
19
A
N
VAL
19
A
O
LEU
22
A
O
LEU
22
A
O
ALA
25
A
O
ALA
25
A
N
ALA
357
A
N
ALA
357
A
O
VAL
91
A
O
VAL
91
A
N
GLY
234
A
N
GLY
234
A
N
TYR
237
A
N
TYR
237
A
O
TYR
220
A
O
TYR
220
A
N
PHE
219
A
N
PHE
219
A
O
VAL
197
A
O
VAL
197
A
N
LYS
196
A
N
LYS
196
A
O
ARG
166
A
O
ARG
166
A
N
ARG
166
A
N
ARG
166
A
O
ASN
115
A
O
ASN
115
A
N
ILE
116
A
N
ILE
116
A
O
GLU
140
A
O
GLU
140
A
O
SER
260
A
O
SER
260
A
N
GLY
264
A
N
GLY
264
A
N
TYR
326
A
N
TYR
326
A
O
ALA
336
A
O
ALA
336
A
O
PHE
337
A
O
PHE
337
A
N
CYS
378
A
N
CYS
378
A
N
ARG
379
A
N
ARG
379
A
O
ARG
359
A
O
ARG
359
1
A
CG1
ILE
2
A
CG1
ILE
2
1
Y
1
A
CG2
ILE
2
A
CG2
ILE
2
1
Y
1
A
CD1
ILE
2
A
CD1
ILE
2
1
Y
1
A
CG
LYS
7
A
CG
LYS
7
1
Y
1
A
CD
LYS
7
A
CD
LYS
7
1
Y
1
A
CE
LYS
7
A
CE
LYS
7
1
Y
1
A
NZ
LYS
7
A
NZ
LYS
7
1
Y
1
A
CG
ARG
56
A
CG
ARG
56
1
Y
1
A
CD
ARG
56
A
CD
ARG
56
1
Y
1
A
NE
ARG
56
A
NE
ARG
56
1
Y
1
A
CZ
ARG
56
A
CZ
ARG
56
1
Y
1
A
NH1
ARG
56
A
NH1
ARG
56
1
Y
1
A
NH2
ARG
56
A
NH2
ARG
56
1
Y
1
A
CG1
ILE
58
A
CG1
ILE
58
1
Y
1
A
CG2
ILE
58
A
CG2
ILE
58
1
Y
1
A
CD1
ILE
58
A
CD1
ILE
58
1
Y
1
A
CG
ASN
330
A
CG
ASN
330
1
Y
1
A
OD1
ASN
330
A
OD1
ASN
330
1
Y
1
A
ND2
ASN
330
A
ND2
ASN
330
1
Y
1
A
CG
LYS
341
A
CG
LYS
341
1
Y
1
A
CD
LYS
341
A
CD
LYS
341
1
Y
1
A
CE
LYS
341
A
CE
LYS
341
1
Y
1
A
NZ
LYS
341
A
NZ
LYS
341
1
Y
1
A
CG
LPG
460
B
CG
LPG
1
1
N
1
A
MET
1
A
MET
1
1
Y
1
A
SER
32
-179.87
130.72
1
A
VAL
54
-76.16
-132.63
1
A
ARG
56
46.58
92.92
1
A
ASN
103
-90.95
-69.62
1
A
ILE
127
-142.81
-66.94
1
A
ASP
162
-118.33
-158.81
1
A
VAL
205
-36.50
-32.56
1
A
HIS
208
179.02
158.91
1
A
LEU
227
-103.65
43.91
1
A
TRP
249
-103.04
-67.92
1
A
SER
254
72.79
-30.57
1
A
PRO
279
-65.62
-179.26
1
A
ASN
280
-103.90
53.82
1
A
ALA
365
-153.60
58.22
1
A
ASN
373
57.79
17.98
1
A
ALA
376
174.28
160.79
PROTEIN_REP.PARAM
PROTEIN.TOP
PARA.PLP
TOPO.PLP
WATER_REP.PARAM
WATER.TOP
ION.PARAM
ION.TOP
40.9
5.54
0.00
0.00
5.54
0.00
-11.07
0.233
0.007
0.209
2.80
50.0
1152
23684
23684
4.9
82.3
RANDOM
215785.24
0.00
1
ISOTROPIC
0.0
FOURIER SYNTHESIS
PDB ENTRY 1C0N
Engh & Huber
FLAT MODEL
31.91
0.318
0.43
0.40
5.00
0.93
0.95
2.80
50.0
0
3117
21
0
3096
0.006
1.172
22.5
0.75
1.20
1.50
2.11
2.00
1.95
2.00
3.29
2.50
0.42
0.42
2.93
120
2784
2022
6
5.3
42.782
2.8
50.0
1I29
25650
23684
1.0
0.096
1
10.6
2.7
82.3
0.341
2.8
5.1
1
78.5
refinement
CNS
phasing
CNS
CRYSTAL STRUCTURE OF CSDB COMPLEXED WITH L-PROPARGYLGLYCINE
1
N
N
2
N
N
3
N
N
The second part of the biological assembly is generated by the two fold axis: y, x, -z.
A
SER
4
A
SER
4
HELX_P
A
ALA
10
A
ALA
10
1
1
7
A
ASP
11
A
ASP
11
HELX_P
A
SER
16
A
SER
16
5
2
6
A
PRO
36
A
PRO
36
HELX_P
A
GLY
50
A
GLY
50
1
3
15
A
HIS
59
A
HIS
59
HELX_P
A
ILE
80
A
ILE
80
1
4
22
A
SER
84
A
SER
84
HELX_P
A
GLU
86
A
GLU
86
5
5
3
A
GLY
93
A
GLY
93
HELX_P
A
TRP
105
A
TRP
105
1
6
13
A
GLY
106
A
GLY
106
HELX_P
A
ASN
109
A
ASN
109
5
7
4
A
HIS
123
A
HIS
123
HELX_P
A
ASN
126
A
ASN
126
5
8
4
A
ILE
127
A
ILE
127
HELX_P
A
GLY
138
A
GLY
138
1
9
12
A
GLN
153
A
GLN
153
HELX_P
A
LEU
160
A
LEU
160
5
10
8
A
PRO
182
A
PRO
182
HELX_P
A
GLN
192
A
GLN
192
1
11
11
A
ASP
211
A
ASP
211
HELX_P
A
ASP
216
A
ASP
216
1
12
6
A
HIS
225
A
HIS
225
HELX_P
A
LEU
227
A
LEU
227
5
13
3
A
LYS
239
A
LYS
239
HELX_P
A
GLN
244
A
GLN
244
1
14
6
A
PRO
271
A
PRO
271
HELX_P
A
GLU
275
A
GLU
275
5
15
5
A
ASN
280
A
ASN
280
HELX_P
A
GLY
298
A
GLY
298
1
16
19
A
GLY
298
A
GLY
298
HELX_P
A
LEU
317
A
LEU
317
1
17
20
A
GLU
318
A
GLU
318
HELX_P
A
VAL
320
A
VAL
320
5
18
3
A
HIS
343
A
HIS
343
HELX_P
A
TYR
354
A
TYR
354
1
19
12
A
ALA
365
A
ALA
365
HELX_P
A
TYR
372
A
TYR
372
1
20
8
A
THR
387
A
THR
387
HELX_P
A
GLY
406
A
GLY
406
1
21
20
covale
1.366
both
A
LPG
460
B
N
LPG
1_555
A
PLP
500
C
C4A
PLP
1_555
LYASE
External aldimine, LYASE
A
ALA
270
A
ALA
270
1
A
PRO
271
A
PRO
271
0.09
BAB21542
GB
1
1
12619308
MIFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI
NARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTL
FDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKE
ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESV
PDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQR
IHRLLG
1
406
1I29
1
406
12619308
A
1
1
406
2
2
7
2
4
anti-parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
18
A
GLU
18
A
VAL
19
A
VAL
19
A
LEU
22
A
LEU
22
A
PRO
23
A
PRO
23
A
ALA
25
A
ALA
25
A
TYR
26
A
TYR
26
A
ILE
356
A
ILE
356
A
ALA
357
A
ALA
357
A
LEU
88
A
LEU
88
A
VAL
91
A
VAL
91
A
GLY
234
A
GLY
234
A
VAL
238
A
VAL
238
A
PHE
219
A
PHE
219
A
SER
223
A
SER
223
A
LYS
196
A
LYS
196
A
ASP
200
A
ASP
200
A
THR
165
A
THR
165
A
THR
171
A
THR
171
A
ASN
115
A
ASN
115
A
SER
119
A
SER
119
A
GLU
140
A
GLU
140
A
ILE
144
A
ILE
144
A
ILE
256
A
ILE
256
A
SER
260
A
SER
260
A
GLY
264
A
GLY
264
A
TRP
267
A
TRP
267
A
LEU
323
A
LEU
323
A
TYR
326
A
TYR
326
A
VAL
334
A
VAL
334
A
LEU
339
A
LEU
339
A
MET
377
A
MET
377
A
SER
381
A
SER
381
A
ARG
359
A
ARG
359
A
GLY
361
A
GLY
361
BINDING SITE FOR RESIDUE LPG A 460
A
LPG
460
Software
6
BINDING SITE FOR RESIDUE PLP A 500
A
PLP
500
Software
10
A
ALA
30
A
ALA
30
6
1_555
A
ALA
31
A
ALA
31
6
1_555
A
HIS
123
A
HIS
123
6
1_555
A
ASN
175
A
ASN
175
6
1_555
A
ARG
379
A
ARG
379
6
1_555
A
PLP
500
C
PLP
6
1_555
A
THR
94
A
THR
94
10
1_555
A
THR
95
A
THR
95
10
1_555
A
ASN
175
A
ASN
175
10
1_555
A
ASP
200
A
ASP
200
10
1_555
A
ALA
202
A
ALA
202
10
1_555
A
SER
223
A
SER
223
10
1_555
A
HIS
225
A
HIS
225
10
1_555
A
LYS
226
A
LYS
226
10
1_555
A
THR
278
A
THR
278
10
7_555
A
LPG
460
B
LPG
10
1_555
96
P 43 21 2