0.024971
0.000000
0.000000
0.000000
0.013705
0.000000
0.000000
0.000000
0.012067
0.000000
0.000000
0.000000
Jensen, P.Y.
Parsons, J.F.
Fisher, K.E.
Pachikara, A.S.
Tordova, M.
Howard, A.J.
Eisenstein, E.
Ladner, J.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
40.047
72.966
82.871
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C8 H10 N O6 P
247.142
PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Structure and Mechanism of Escherichia coli Aminodeoxychorismate Lyase
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
115
1
CCD
1999-07-03
BRUKER
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
17-ID
APS
1.0
1.0
SYNCHROTRON
APS BEAMLINE 17-ID
29745.031
4-AMINO-4-DEOXYCHORISMATE LYASE
4.-.-.-
1
man
polymer
247.142
PYRIDOXAL-5'-PHOSPHATE
1
syn
non-polymer
18.015
water
212
nat
water
no
no
MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLK
VVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD
EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMP
VMPVCACGDVSFSSATLYEYLAPLCERPN
MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLK
VVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD
EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMP
VMPVCACGDVSFSSATLYEYLAPLCERPN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
PABC
562
Escherichia coli
562
Escherichia coli
1
2
39.54
THE WATER MOLECULES HAVE BEEN ORDERED SO THAT THE FIRST 177 FORM THE FIRST HYDRATION SPHERE, THE NEXT 30 BELONG TO THE SECOND HYDRATION SHPERE AND THE FINAL 5 BELONG TO THE THIRD HYDRATION SHPERE.
VAPOR DIFFUSION, HANGING DROP
6
20% PEG 4000, 0.2M magnesium acetate, 0.1M HEPES, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
software
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Refinement description
1
0
2003-09-02
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
RCSB
Y
RCSB
2001-02-09
REL
REL
PLP
PYRIDOXAL-5'-PHOSPHATE
HOH
water
PLP
301
2
PLP
PLP
301
A
WAT
401
3
HOH
HOH
401
A
WAT
402
3
HOH
HOH
402
A
WAT
403
3
HOH
HOH
403
A
WAT
404
3
HOH
HOH
404
A
WAT
405
3
HOH
HOH
405
A
WAT
406
3
HOH
HOH
406
A
WAT
407
3
HOH
HOH
407
A
WAT
408
3
HOH
HOH
408
A
WAT
409
3
HOH
HOH
409
A
WAT
410
3
HOH
HOH
410
A
WAT
411
3
HOH
HOH
411
A
WAT
412
3
HOH
HOH
412
A
WAT
413
3
HOH
HOH
413
A
WAT
414
3
HOH
HOH
414
A
WAT
415
3
HOH
HOH
415
A
WAT
416
3
HOH
HOH
416
A
WAT
417
3
HOH
HOH
417
A
WAT
418
3
HOH
HOH
418
A
WAT
419
3
HOH
HOH
419
A
WAT
420
3
HOH
HOH
420
A
WAT
421
3
HOH
HOH
421
A
WAT
422
3
HOH
HOH
422
A
WAT
423
3
HOH
HOH
423
A
WAT
424
3
HOH
HOH
424
A
WAT
425
3
HOH
HOH
425
A
WAT
426
3
HOH
HOH
426
A
WAT
427
3
HOH
HOH
427
A
WAT
428
3
HOH
HOH
428
A
WAT
429
3
HOH
HOH
429
A
WAT
430
3
HOH
HOH
430
A
WAT
431
3
HOH
HOH
431
A
WAT
432
3
HOH
HOH
432
A
WAT
433
3
HOH
HOH
433
A
WAT
434
3
HOH
HOH
434
A
WAT
435
3
HOH
HOH
435
A
WAT
436
3
HOH
HOH
436
A
WAT
437
3
HOH
HOH
437
A
WAT
438
3
HOH
HOH
438
A
WAT
439
3
HOH
HOH
439
A
WAT
440
3
HOH
HOH
440
A
WAT
441
3
HOH
HOH
441
A
WAT
442
3
HOH
HOH
442
A
WAT
443
3
HOH
HOH
443
A
WAT
444
3
HOH
HOH
444
A
WAT
445
3
HOH
HOH
445
A
WAT
446
3
HOH
HOH
446
A
WAT
447
3
HOH
HOH
447
A
WAT
448
3
HOH
HOH
448
A
WAT
449
3
HOH
HOH
449
A
WAT
450
3
HOH
HOH
450
A
WAT
451
3
HOH
HOH
451
A
WAT
452
3
HOH
HOH
452
A
WAT
453
3
HOH
HOH
453
A
WAT
454
3
HOH
HOH
454
A
WAT
455
3
HOH
HOH
455
A
WAT
456
3
HOH
HOH
456
A
WAT
457
3
HOH
HOH
457
A
WAT
458
3
HOH
HOH
458
A
WAT
459
3
HOH
HOH
459
A
WAT
460
3
HOH
HOH
460
A
WAT
461
3
HOH
HOH
461
A
WAT
462
3
HOH
HOH
462
A
WAT
463
3
HOH
HOH
463
A
WAT
464
3
HOH
HOH
464
A
WAT
465
3
HOH
HOH
465
A
WAT
466
3
HOH
HOH
466
A
WAT
467
3
HOH
HOH
467
A
WAT
468
3
HOH
HOH
468
A
WAT
469
3
HOH
HOH
469
A
WAT
470
3
HOH
HOH
470
A
WAT
471
3
HOH
HOH
471
A
WAT
472
3
HOH
HOH
472
A
WAT
473
3
HOH
HOH
473
A
WAT
474
3
HOH
HOH
474
A
WAT
475
3
HOH
HOH
475
A
WAT
476
3
HOH
HOH
476
A
WAT
477
3
HOH
HOH
477
A
WAT
478
3
HOH
HOH
478
A
WAT
479
3
HOH
HOH
479
A
WAT
480
3
HOH
HOH
480
A
WAT
481
3
HOH
HOH
481
A
WAT
482
3
HOH
HOH
482
A
WAT
483
3
HOH
HOH
483
A
WAT
484
3
HOH
HOH
484
A
WAT
485
3
HOH
HOH
485
A
WAT
486
3
HOH
HOH
486
A
WAT
487
3
HOH
HOH
487
A
WAT
488
3
HOH
HOH
488
A
WAT
489
3
HOH
HOH
489
A
WAT
490
3
HOH
HOH
490
A
WAT
491
3
HOH
HOH
491
A
WAT
492
3
HOH
HOH
492
A
WAT
493
3
HOH
HOH
493
A
WAT
494
3
HOH
HOH
494
A
WAT
495
3
HOH
HOH
495
A
WAT
496
3
HOH
HOH
496
A
WAT
497
3
HOH
HOH
497
A
WAT
498
3
HOH
HOH
498
A
WAT
499
3
HOH
HOH
499
A
WAT
500
3
HOH
HOH
500
A
WAT
501
3
HOH
HOH
501
A
WAT
502
3
HOH
HOH
502
A
WAT
503
3
HOH
HOH
503
A
WAT
504
3
HOH
HOH
504
A
WAT
505
3
HOH
HOH
505
A
WAT
506
3
HOH
HOH
506
A
WAT
507
3
HOH
HOH
507
A
WAT
508
3
HOH
HOH
508
A
WAT
509
3
HOH
HOH
509
A
WAT
510
3
HOH
HOH
510
A
WAT
511
3
HOH
HOH
511
A
WAT
512
3
HOH
HOH
512
A
WAT
513
3
HOH
HOH
513
A
WAT
514
3
HOH
HOH
514
A
WAT
515
3
HOH
HOH
515
A
WAT
516
3
HOH
HOH
516
A
WAT
517
3
HOH
HOH
517
A
WAT
518
3
HOH
HOH
518
A
WAT
519
3
HOH
HOH
519
A
WAT
520
3
HOH
HOH
520
A
WAT
521
3
HOH
HOH
521
A
WAT
522
3
HOH
HOH
522
A
WAT
523
3
HOH
HOH
523
A
WAT
524
3
HOH
HOH
524
A
WAT
525
3
HOH
HOH
525
A
WAT
526
3
HOH
HOH
526
A
WAT
527
3
HOH
HOH
527
A
WAT
528
3
HOH
HOH
528
A
WAT
529
3
HOH
HOH
529
A
WAT
530
3
HOH
HOH
530
A
WAT
531
3
HOH
HOH
531
A
WAT
532
3
HOH
HOH
532
A
WAT
533
3
HOH
HOH
533
A
WAT
534
3
HOH
HOH
534
A
WAT
535
3
HOH
HOH
535
A
WAT
536
3
HOH
HOH
536
A
WAT
537
3
HOH
HOH
537
A
WAT
538
3
HOH
HOH
538
A
WAT
539
3
HOH
HOH
539
A
WAT
540
3
HOH
HOH
540
A
WAT
541
3
HOH
HOH
541
A
WAT
542
3
HOH
HOH
542
A
WAT
543
3
HOH
HOH
543
A
WAT
544
3
HOH
HOH
544
A
WAT
545
3
HOH
HOH
545
A
WAT
546
3
HOH
HOH
546
A
WAT
547
3
HOH
HOH
547
A
WAT
548
3
HOH
HOH
548
A
WAT
549
3
HOH
HOH
549
A
WAT
550
3
HOH
HOH
550
A
WAT
551
3
HOH
HOH
551
A
WAT
552
3
HOH
HOH
552
A
WAT
553
3
HOH
HOH
553
A
WAT
554
3
HOH
HOH
554
A
WAT
555
3
HOH
HOH
555
A
WAT
556
3
HOH
HOH
556
A
WAT
557
3
HOH
HOH
557
A
WAT
558
3
HOH
HOH
558
A
WAT
559
3
HOH
HOH
559
A
WAT
560
3
HOH
HOH
560
A
WAT
561
3
HOH
HOH
561
A
WAT
562
3
HOH
HOH
562
A
WAT
563
3
HOH
HOH
563
A
WAT
564
3
HOH
HOH
564
A
WAT
565
3
HOH
HOH
565
A
WAT
566
3
HOH
HOH
566
A
WAT
567
3
HOH
HOH
567
A
WAT
568
3
HOH
HOH
568
A
WAT
569
3
HOH
HOH
569
A
WAT
570
3
HOH
HOH
570
A
WAT
571
3
HOH
HOH
571
A
WAT
572
3
HOH
HOH
572
A
WAT
573
3
HOH
HOH
573
A
WAT
574
3
HOH
HOH
574
A
WAT
575
3
HOH
HOH
575
A
WAT
576
3
HOH
HOH
576
A
WAT
577
3
HOH
HOH
577
A
WAT
578
3
HOH
HOH
578
A
WAT
579
3
HOH
HOH
579
A
WAT
580
3
HOH
HOH
580
A
WAT
581
3
HOH
HOH
581
A
WAT
582
3
HOH
HOH
582
A
WAT
583
3
HOH
HOH
583
A
WAT
584
3
HOH
HOH
584
A
WAT
585
3
HOH
HOH
585
A
WAT
586
3
HOH
HOH
586
A
WAT
587
3
HOH
HOH
587
A
WAT
588
3
HOH
HOH
588
A
WAT
589
3
HOH
HOH
589
A
WAT
590
3
HOH
HOH
590
A
WAT
591
3
HOH
HOH
591
A
WAT
592
3
HOH
HOH
592
A
WAT
593
3
HOH
HOH
593
A
WAT
594
3
HOH
HOH
594
A
WAT
595
3
HOH
HOH
595
A
WAT
596
3
HOH
HOH
596
A
WAT
597
3
HOH
HOH
597
A
WAT
598
3
HOH
HOH
598
A
WAT
599
3
HOH
HOH
599
A
WAT
600
3
HOH
HOH
600
A
WAT
601
3
HOH
HOH
601
A
WAT
602
3
HOH
HOH
602
A
WAT
603
3
HOH
HOH
603
A
WAT
604
3
HOH
HOH
604
A
WAT
605
3
HOH
HOH
605
A
WAT
606
3
HOH
HOH
606
A
WAT
607
3
HOH
HOH
607
A
WAT
608
3
HOH
HOH
608
A
WAT
609
3
HOH
HOH
609
A
WAT
610
3
HOH
HOH
610
A
WAT
611
3
HOH
HOH
611
A
WAT
612
3
HOH
HOH
612
A
MET
1
n
1
MET
1
A
PHE
2
n
2
PHE
2
A
LEU
3
n
3
LEU
3
A
ILE
4
n
4
ILE
4
A
ASN
5
n
5
ASN
5
A
GLY
6
n
6
GLY
6
A
HIS
7
n
7
HIS
7
A
LYS
8
n
8
LYS
8
A
GLN
9
n
9
GLN
9
A
GLU
10
n
10
GLU
10
A
SER
11
n
11
SER
11
A
LEU
12
n
12
LEU
12
A
ALA
13
n
13
ALA
13
A
VAL
14
n
14
VAL
14
A
SER
15
n
15
SER
15
A
ASP
16
n
16
ASP
16
A
ARG
17
n
17
ARG
17
A
ALA
18
n
18
ALA
18
A
THR
19
n
19
THR
19
A
GLN
20
n
20
GLN
20
A
PHE
21
n
21
PHE
21
A
GLY
22
n
22
GLY
22
A
ASP
23
n
23
ASP
23
A
GLY
24
n
24
GLY
24
A
CYS
25
n
25
CYS
25
A
PHE
26
n
26
PHE
26
A
THR
27
n
27
THR
27
A
THR
28
n
28
THR
28
A
ALA
29
n
29
ALA
29
A
ARG
30
n
30
ARG
30
A
VAL
31
n
31
VAL
31
A
ILE
32
n
32
ILE
32
A
ASP
33
n
33
ASP
33
A
GLY
34
n
34
GLY
34
A
LYS
35
n
35
LYS
35
A
VAL
36
n
36
VAL
36
A
SER
37
n
37
SER
37
A
LEU
38
n
38
LEU
38
A
LEU
39
n
39
LEU
39
A
SER
40
n
40
SER
40
A
ALA
41
n
41
ALA
41
A
HIS
42
n
42
HIS
42
A
ILE
43
n
43
ILE
43
A
GLN
44
n
44
GLN
44
A
ARG
45
n
45
ARG
45
A
LEU
46
n
46
LEU
46
A
GLN
47
n
47
GLN
47
A
ASP
48
n
48
ASP
48
A
ALA
49
n
49
ALA
49
A
CYS
50
n
50
CYS
50
A
GLN
51
n
51
GLN
51
A
ARG
52
n
52
ARG
52
A
LEU
53
n
53
LEU
53
A
MET
54
n
54
MET
54
A
ILE
55
n
55
ILE
55
A
SER
56
n
56
SER
56
A
CYS
57
n
57
CYS
57
A
ASP
58
n
58
ASP
58
A
PHE
59
n
59
PHE
59
A
TRP
60
n
60
TRP
60
A
PRO
61
n
61
PRO
61
A
GLN
62
n
62
GLN
62
A
LEU
63
n
63
LEU
63
A
GLU
64
n
64
GLU
64
A
GLN
65
n
65
GLN
65
A
GLU
66
n
66
GLU
66
A
MET
67
n
67
MET
67
A
LYS
68
n
68
LYS
68
A
THR
69
n
69
THR
69
A
LEU
70
n
70
LEU
70
A
ALA
71
n
71
ALA
71
A
ALA
72
n
72
ALA
72
A
GLU
73
n
73
GLU
73
A
GLN
74
n
74
GLN
74
A
GLN
75
n
75
GLN
75
A
ASN
76
n
76
ASN
76
A
GLY
77
n
77
GLY
77
A
VAL
78
n
78
VAL
78
A
LEU
79
n
79
LEU
79
A
LYS
80
n
80
LYS
80
A
VAL
81
n
81
VAL
81
A
VAL
82
n
82
VAL
82
A
ILE
83
n
83
ILE
83
A
SER
84
n
84
SER
84
A
ARG
85
n
85
ARG
85
A
GLY
86
n
86
GLY
86
A
SER
87
n
87
SER
87
A
GLY
88
n
88
GLY
88
A
GLY
89
n
89
GLY
89
A
ARG
90
n
90
ARG
90
A
GLY
91
n
91
GLY
91
A
TYR
92
n
92
TYR
92
A
SER
93
n
93
SER
93
A
THR
94
n
94
THR
94
A
LEU
95
n
95
LEU
95
A
ASN
96
n
96
ASN
96
A
SER
97
n
97
SER
97
A
GLY
98
n
98
GLY
98
A
PRO
99
n
99
PRO
99
A
ALA
100
n
100
ALA
100
A
THR
101
n
101
THR
101
A
ARG
102
n
102
ARG
102
A
ILE
103
n
103
ILE
103
A
LEU
104
n
104
LEU
104
A
SER
105
n
105
SER
105
A
VAL
106
n
106
VAL
106
A
THR
107
n
107
THR
107
A
ALA
108
n
108
ALA
108
A
TYR
109
n
109
TYR
109
A
PRO
110
n
110
PRO
110
A
ALA
111
n
111
ALA
111
A
HIS
112
n
112
HIS
112
A
TYR
113
n
113
TYR
113
A
ASP
114
n
114
ASP
114
A
ARG
115
n
115
ARG
115
A
LEU
116
n
116
LEU
116
A
ARG
117
n
117
ARG
117
A
ASN
118
n
118
ASN
118
A
GLU
119
n
119
GLU
119
A
GLY
120
n
120
GLY
120
A
ILE
121
n
121
ILE
121
A
THR
122
n
122
THR
122
A
LEU
123
n
123
LEU
123
A
ALA
124
n
124
ALA
124
A
LEU
125
n
125
LEU
125
A
SER
126
n
126
SER
126
A
PRO
127
n
127
PRO
127
A
VAL
128
n
128
VAL
128
A
ARG
129
n
129
ARG
129
A
LEU
130
n
130
LEU
130
A
GLY
131
n
131
GLY
131
A
ARG
132
n
132
ARG
132
A
ASN
133
n
133
ASN
133
A
PRO
134
n
134
PRO
134
A
HIS
135
n
135
HIS
135
A
LEU
136
n
136
LEU
136
A
ALA
137
n
137
ALA
137
A
GLY
138
n
138
GLY
138
A
ILE
139
n
139
ILE
139
A
LYS
140
n
140
LYS
140
A
HIS
141
n
141
HIS
141
A
LEU
142
n
142
LEU
142
A
ASN
143
n
143
ASN
143
A
ARG
144
n
144
ARG
144
A
LEU
145
n
145
LEU
145
A
GLU
146
n
146
GLU
146
A
GLN
147
n
147
GLN
147
A
VAL
148
n
148
VAL
148
A
LEU
149
n
149
LEU
149
A
ILE
150
n
150
ILE
150
A
ARG
151
n
151
ARG
151
A
SER
152
n
152
SER
152
A
HIS
153
n
153
HIS
153
A
LEU
154
n
154
LEU
154
A
GLU
155
n
155
GLU
155
A
GLN
156
n
156
GLN
156
A
THR
157
n
157
THR
157
A
ASN
158
n
158
ASN
158
A
ALA
159
n
159
ALA
159
A
ASP
160
n
160
ASP
160
A
GLU
161
n
161
GLU
161
A
ALA
162
n
162
ALA
162
A
LEU
163
n
163
LEU
163
A
VAL
164
n
164
VAL
164
A
LEU
165
n
165
LEU
165
A
ASP
166
n
166
ASP
166
A
SER
167
n
167
SER
167
A
GLU
168
n
168
GLU
168
A
GLY
169
n
169
GLY
169
A
TRP
170
n
170
TRP
170
A
VAL
171
n
171
VAL
171
A
THR
172
n
172
THR
172
A
GLU
173
n
173
GLU
173
A
CYS
174
n
174
CYS
174
A
CYS
175
n
175
CYS
175
A
ALA
176
n
176
ALA
176
A
ALA
177
n
177
ALA
177
A
ASN
178
n
178
ASN
178
A
LEU
179
n
179
LEU
179
A
PHE
180
n
180
PHE
180
A
TRP
181
n
181
TRP
181
A
ARG
182
n
182
ARG
182
A
LYS
183
n
183
LYS
183
A
GLY
184
n
184
GLY
184
A
ASN
185
n
185
ASN
185
A
VAL
186
n
186
VAL
186
A
VAL
187
n
187
VAL
187
A
TYR
188
n
188
TYR
188
A
THR
189
n
189
THR
189
A
PRO
190
n
190
PRO
190
A
ARG
191
n
191
ARG
191
A
LEU
192
n
192
LEU
192
A
ASP
193
n
193
ASP
193
A
GLN
194
n
194
GLN
194
A
ALA
195
n
195
ALA
195
A
GLY
196
n
196
GLY
196
A
VAL
197
n
197
VAL
197
A
ASN
198
n
198
ASN
198
A
GLY
199
n
199
GLY
199
A
ILE
200
n
200
ILE
200
A
MET
201
n
201
MET
201
A
ARG
202
n
202
ARG
202
A
GLN
203
n
203
GLN
203
A
PHE
204
n
204
PHE
204
A
CYS
205
n
205
CYS
205
A
ILE
206
n
206
ILE
206
A
ARG
207
n
207
ARG
207
A
LEU
208
n
208
LEU
208
A
LEU
209
n
209
LEU
209
A
ALA
210
n
210
ALA
210
A
GLN
211
n
211
GLN
211
A
SER
212
n
212
SER
212
A
SER
213
n
213
SER
213
A
TYR
214
n
214
TYR
214
A
GLN
215
n
215
GLN
215
A
LEU
216
n
216
LEU
216
A
VAL
217
n
217
VAL
217
A
GLU
218
n
218
GLU
218
A
VAL
219
n
219
VAL
219
A
GLN
220
n
220
GLN
220
A
ALA
221
n
221
ALA
221
A
SER
222
n
222
SER
222
A
LEU
223
n
223
LEU
223
A
GLU
224
n
224
GLU
224
A
GLU
225
n
225
GLU
225
A
SER
226
n
226
SER
226
A
LEU
227
n
227
LEU
227
A
GLN
228
n
228
GLN
228
A
ALA
229
n
229
ALA
229
A
ASP
230
n
230
ASP
230
A
GLU
231
n
231
GLU
231
A
MET
232
n
232
MET
232
A
VAL
233
n
233
VAL
233
A
ILE
234
n
234
ILE
234
A
CYS
235
n
235
CYS
235
A
ASN
236
n
236
ASN
236
A
ALA
237
n
237
ALA
237
A
LEU
238
n
238
LEU
238
A
MET
239
n
239
MET
239
A
PRO
240
n
240
PRO
240
A
VAL
241
n
241
VAL
241
A
MET
242
n
242
MET
242
A
PRO
243
n
243
PRO
243
A
VAL
244
n
244
VAL
244
A
CYS
245
n
245
CYS
245
A
ALA
246
n
246
ALA
246
A
CYS
247
n
247
CYS
247
A
GLY
248
n
248
GLY
248
A
ASP
249
n
249
ASP
249
A
VAL
250
n
250
VAL
250
A
SER
251
n
251
SER
251
A
PHE
252
n
252
PHE
252
A
SER
253
n
253
SER
253
A
SER
254
n
254
SER
254
A
ALA
255
n
255
ALA
255
A
THR
256
n
256
THR
256
A
LEU
257
n
257
LEU
257
A
TYR
258
n
258
TYR
258
A
GLU
259
n
259
GLU
259
A
TYR
260
n
260
TYR
260
A
LEU
261
n
261
LEU
261
A
ALA
262
n
262
ALA
262
A
PRO
263
n
263
PRO
263
A
LEU
264
n
264
LEU
264
A
CYS
265
n
265
CYS
265
A
GLU
266
n
266
GLU
266
A
ARG
267
n
267
ARG
267
A
PRO
268
n
268
PRO
268
A
ASN
269
n
269
ASN
269
A
0.1593
0.163
0.1596
0.164
0.2424
0.248
1115
1153
5.4
5.
20568
author_and_software_defined_assembly
PISA,PQS
2
dimeric
5610
-29
21050
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_655
-x+1,-y,z
crystal symmetry operation
40.0470000000
0.0000000000
0.0000000000
A
N
GLN
9
A
N
GLN
9
A
O
PHE
2
A
O
PHE
2
A
O
LEU
3
A
O
LEU
3
A
N
LEU
104
A
N
LEU
104
A
O
THR
107
A
O
THR
107
A
N
VAL
78
A
N
VAL
78
A
N
ILE
83
A
N
ILE
83
A
O
CYS
25
A
O
CYS
25
A
N
ILE
32
A
N
ILE
32
A
O
LYS
35
A
O
LYS
35
A
O
GLN
215
A
O
GLN
215
A
N
VAL
187
A
N
VAL
187
A
N
TYR
188
A
N
TYR
188
A
O
TRP
181
A
O
TRP
181
A
N
ARG
182
A
N
ARG
182
A
O
GLU
231
A
O
GLU
231
A
O
ILE
234
A
O
ILE
234
A
N
MET
242
A
N
MET
242
A
O
PRO
243
A
O
PRO
243
A
N
ILE
121
A
N
ILE
121
A
O
THR
122
A
O
THR
122
A
N
GLU
161
A
N
GLU
161
A
O
VAL
164
A
O
VAL
164
A
N
THR
172
A
N
THR
172
A
O
GLN
215
A
O
GLN
215
A
N
VAL
187
A
N
VAL
187
A
N
TYR
188
A
N
TYR
188
A
O
TRP
181
A
O
TRP
181
A
N
ARG
182
A
N
ARG
182
A
O
GLU
231
A
O
GLU
231
A
O
ILE
234
A
O
ILE
234
A
N
MET
242
A
N
MET
242
A
N
CYS
247
A
N
CYS
247
A
O
VAL
250
A
O
VAL
250
1
A
HOH
519
C
HOH
1
A
GLN
75
68.26
-55.51
1
A
GLU
173
-167.70
-166.94
1
A
CYS
174
-104.07
-160.96
0.248
0.1641
0.163
0.164
1.79
10.00
9409
115
21637
8766
5.
93.1
RANDOM
1
FREE R
0.0
AB INITIO
ENGH AND HUBER
12
0.00
2305.50
1.79
10.00
212
2306
15
0
2079
0.007
0.024
0.000
0.0271
0.038
0.045
0.008
0.000
0.079
0.000
1.79
36.0
1I2K
21637
0.089
1
10.7
6.8
92.4
0.362
1.8
1.9
2.8
1
6.4
88.3
data scaling
X-GEN
data reduction
X-GEN
model building
SHELX
refinement
SHELXL-97
phasing
SHELX
4-AMINO-4-DEOXYCHORISMATE LYASE (E.C.4.-.-.-)
AMINODEOXYCHORISMATE LYASE FROM ESCHERICHIA COLI
1
N
N
2
N
N
3
N
N
The second chain in the dimer is generated by the crystal two fold:
Use the symmetry -x,-y,z and add one cell in X
A
ASP
16
A
ASP
16
HELX_P
A
GLY
22
A
GLY
22
1
1
7
A
LEU
38
A
LEU
38
HELX_P
A
LEU
53
A
LEU
53
1
2
16
A
PHE
59
A
PHE
59
HELX_P
A
GLN
75
A
GLN
75
1
3
17
A
ALA
111
A
ALA
111
HELX_P
A
GLY
120
A
GLY
120
1
4
10
A
ARG
144
A
ARG
144
HELX_P
A
GLU
155
A
GLU
155
1
5
12
A
GLY
199
A
GLY
199
HELX_P
A
SER
212
A
SER
212
1
6
14
A
SER
222
A
SER
222
HELX_P
A
GLN
228
A
GLN
228
1
7
7
A
ALA
255
A
ALA
255
HELX_P
A
ARG
267
A
ARG
267
1
8
13
covale
1.359
A
PLP
301
B
C4A
PLP
1_555
A
LYS
140
A
NZ
LYS
140
1_555
LYASE
LYASE, PYRIDOXAL PHOSPHATE, AMINODEOXYCHORISMATE, PABC
A
GLY
98
A
GLY
98
1
A
PRO
99
A
PRO
99
8.30
A
MET
239
A
MET
239
1
A
PRO
240
A
PRO
240
-1.88
A
ARG
267
A
ARG
267
1
A
PRO
268
A
PRO
268
-1.31
PABC_ECOLI
UNP
1
1
P28305
MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLK
VVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD
EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMP
VMPVCACGDVSFSSATLYEYLAPLCERPN
1
269
1I2K
1
269
P28305
A
1
1
269
6
8
6
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
HIS
7
A
HIS
7
A
GLN
9
A
GLN
9
A
PHE
2
A
PHE
2
A
ILE
4
A
ILE
4
A
THR
101
A
THR
101
A
THR
107
A
THR
107
A
GLY
77
A
GLY
77
A
SER
84
A
SER
84
A
GLY
24
A
GLY
24
A
ILE
32
A
ILE
32
A
LYS
35
A
LYS
35
A
VAL
36
A
VAL
36
A
GLN
215
A
GLN
215
A
VAL
219
A
VAL
219
A
VAL
186
A
VAL
186
A
PRO
190
A
PRO
190
A
ASN
178
A
ASN
178
A
LYS
183
A
LYS
183
A
GLU
231
A
GLU
231
A
CYS
235
A
CYS
235
A
VAL
241
A
VAL
241
A
CYS
247
A
CYS
247
A
ILE
121
A
ILE
121
A
LEU
125
A
LEU
125
A
GLU
161
A
GLU
161
A
LEU
165
A
LEU
165
A
VAL
171
A
VAL
171
A
GLU
173
A
GLU
173
A
GLN
215
A
GLN
215
A
VAL
219
A
VAL
219
A
VAL
186
A
VAL
186
A
PRO
190
A
PRO
190
A
ASN
178
A
ASN
178
A
LYS
183
A
LYS
183
A
GLU
231
A
GLU
231
A
CYS
235
A
CYS
235
A
VAL
241
A
VAL
241
A
CYS
247
A
CYS
247
A
VAL
250
A
VAL
250
A
SER
251
A
SER
251
BINDING SITE FOR RESIDUE PLP A 301
Software
17
A
ARG
45
A
ARG
45
17
1_555
A
TYR
92
A
TYR
92
17
2_655
A
LYS
140
A
LYS
140
17
1_555
A
GLU
173
A
GLU
173
17
1_555
A
CYS
175
A
CYS
175
17
1_555
A
ALA
176
A
ALA
176
17
1_555
A
ALA
177
A
ALA
177
17
1_555
A
ASN
178
A
ASN
178
17
1_555
A
VAL
197
A
VAL
197
17
1_555
A
GLY
199
A
GLY
199
17
1_555
A
ILE
200
A
ILE
200
17
1_555
A
MET
201
A
MET
201
17
1_555
A
ASN
236
A
ASN
236
17
1_555
A
ALA
237
A
ALA
237
17
1_555
A
HOH
413
C
HOH
17
1_555
A
HOH
576
C
HOH
17
1_555
A
HOH
577
C
HOH
17
1_555
18
P 21 21 2