0.025320 0.000000 0.000000 0.000000 0.013877 0.000000 0.000000 0.000000 0.012246 0.000000 0.000000 0.000000 Jensen, P.Y. Parsons, J.F. Fisher, K.E. Pachikara, A.S. Tordova, M. Howard, A.J. Eisenstein, E. Ladner, J.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 39.494 72.060 81.662 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C11 H16 N3 O7 P 333.234 D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE D-PYRIDOXYL-N,O-CYCLOSERYLAMIDE-5-MONOPHOSPHATE non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H Y 88 N N Y 89 N C N 90 N C Y 91 N C N 92 N O Y 93 N C N 94 N C Y 95 N C Y 96 N C N 97 N C N 98 N O N 99 N P N 100 N O N 101 N O N 102 N O N 103 N N N 104 R C N 105 N C N 106 N O N 107 N N N 108 N O N 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N N N 127 S C N 128 N C N 129 N O N 130 N C N 131 N C N 132 N C N 133 N O N 134 N N N 135 N O N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N N N 147 S C N 148 N C N 149 N O N 150 N C N 151 N C N 152 N C N 153 N O N 154 N O N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N N N 166 N C N 167 N C N 168 N O N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N N N 176 S C N 177 N C N 178 N O N 179 N C Y 180 N C Y 181 N N Y 182 N C Y 183 N C Y 184 N N N 185 N O N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N O N 197 N H N 198 N H N 199 N N N 200 S C N 201 N C N 202 N O N 203 S C N 204 N C N 205 N C N 206 N C N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N N N 222 S C N 223 N C N 224 N O N 225 N C N 226 N C N 227 N C N 228 N C N 229 N O N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N N N 244 S C N 245 N C N 246 N O N 247 N C N 248 N C N 249 N C N 250 N C N 251 N N N 252 N O N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N N N 269 S C N 270 N C N 271 N O N 272 N C N 273 N C N 274 N S N 275 N C N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N N N 289 S C N 290 N C N 291 N O N 292 N C Y 293 N C Y 294 N C Y 295 N C Y 296 N C Y 297 N C Y 298 N C N 299 N O N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N N N 312 S C N 313 N C N 314 N O N 315 N C N 316 N C N 317 N C N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N N N 329 S C N 330 N C N 331 N O N 332 N C N 333 N O N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N N N 343 S C N 344 N C N 345 N O N 346 R C N 347 N O N 348 N C N 349 N O N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C Y 364 N C Y 365 N C Y 366 N C Y 367 N N Y 368 N C Y 369 N C Y 370 N C Y 371 N C Y 372 N C N 373 N O N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N N N 387 S C N 388 N C N 389 N O N 390 N C Y 391 N C Y 392 N C Y 393 N C Y 394 N C Y 395 N C Y 396 N C N 397 N O N 398 N O N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N N N 411 S C N 412 N C N 413 N O N 414 N C N 415 N C N 416 N C N 417 N O N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing Y 83 N doub Y 84 N sing N 85 N sing Y 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing Y 91 N doub N 92 N sing N 93 N sing Y 94 N sing N 95 N sing N 96 N sing N 97 N sing Y 98 N doub N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N doub Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N doub N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N doub N 283 N sing N 284 N sing N 285 N sing N 286 N sing Y 287 N doub Y 288 N sing Y 289 N sing N 290 N sing Y 291 N doub N 292 N sing Y 293 N doub N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing Y 356 N doub Y 357 N sing Y 358 N sing N 359 N sing Y 360 N doub Y 361 N sing Y 362 N sing N 363 N sing Y 364 N sing Y 365 N doub N 366 N sing Y 367 N doub N 368 N sing Y 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing Y 384 N doub Y 385 N sing Y 386 N sing N 387 N sing Y 388 N doub N 389 N sing Y 390 N doub N 391 N sing Y 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N doub N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing To be Published 0353 Structure and Mechanism of Escherichia coli Aminodeoxychorismate Lyase 10.2210/pdb1i2l/pdb pdb_00001i2l 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 115 1 CCD 2000-02-27 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 0.98790 1.0 0.9879 1.0 17-ID APS 0.98790 0.9879 SYNCHROTRON APS BEAMLINE 17-ID 29745.031 4-AMINO-4-DEOXYCHORISMATE LYASE 4.-.-.- 1 man polymer 333.234 D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE 1 syn non-polymer 18.015 water 142 nat water no no MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLK VVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMP VMPVCACGDVSFSSATLYEYLAPLCERPN MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLK VVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMP VMPVCACGDVSFSSATLYEYLAPLCERPN A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia sample PABC 562 Escherichia coli 562 Escherichia coli 1 2 37.01 THE WATER MOLECULES HAVE BEEN ORDERED SO THAT THOSE THAT AGREE WITHIN 1.0 A OF WATER MOLECULES IN THE ADC LYASE 1.8 A STRUCTURE WITHOUT AN INHIBITOR ARE NUMBERED THE SAME. OTHER WATER MOLECULES ARE NUMBERED STARTING WITH 801. VAPOR DIFFUSION, HANGING DROP 6 20% PEG 4000, 0.2M magnesium acetate, 0.1M HEPES, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 software chem_comp_atom chem_comp_bond database_2 struct_site pdbx_initial_refinement_model repository Initial release Version format compliance Derived calculations Version format compliance Refinement description Data collection Database references Derived calculations Refinement description 1 0 2003-09-02 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 1 4 2024-02-07 1 5 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2001-02-09 REL REL DCS D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE HOH water ADC LYASE other SCP 301 2 DCS DCS 301 A WAT 402 3 HOH HOH 402 A WAT 403 3 HOH HOH 403 A WAT 407 3 HOH HOH 407 A WAT 410 3 HOH HOH 410 A WAT 413 3 HOH HOH 413 A WAT 414 3 HOH HOH 414 A WAT 418 3 HOH HOH 418 A WAT 419 3 HOH HOH 419 A WAT 420 3 HOH HOH 420 A WAT 422 3 HOH HOH 422 A WAT 423 3 HOH HOH 423 A WAT 424 3 HOH HOH 424 A WAT 425 3 HOH HOH 425 A WAT 428 3 HOH HOH 428 A WAT 429 3 HOH HOH 429 A WAT 430 3 HOH HOH 430 A WAT 435 3 HOH HOH 435 A WAT 436 3 HOH HOH 436 A WAT 437 3 HOH HOH 437 A WAT 440 3 HOH HOH 440 A WAT 441 3 HOH HOH 441 A WAT 445 3 HOH HOH 445 A WAT 447 3 HOH HOH 447 A WAT 448 3 HOH HOH 448 A WAT 450 3 HOH HOH 450 A WAT 454 3 HOH HOH 454 A WAT 457 3 HOH HOH 457 A WAT 459 3 HOH HOH 459 A WAT 460 3 HOH HOH 460 A WAT 461 3 HOH HOH 461 A WAT 466 3 HOH HOH 466 A WAT 474 3 HOH HOH 474 A WAT 475 3 HOH HOH 475 A WAT 477 3 HOH HOH 477 A WAT 480 3 HOH HOH 480 A WAT 482 3 HOH HOH 482 A WAT 487 3 HOH HOH 487 A WAT 488 3 HOH HOH 488 A WAT 489 3 HOH HOH 489 A WAT 491 3 HOH HOH 491 A WAT 493 3 HOH HOH 493 A WAT 494 3 HOH HOH 494 A WAT 496 3 HOH HOH 496 A WAT 498 3 HOH HOH 498 A WAT 499 3 HOH HOH 499 A WAT 500 3 HOH HOH 500 A WAT 501 3 HOH HOH 501 A WAT 502 3 HOH HOH 502 A WAT 503 3 HOH HOH 503 A WAT 506 3 HOH HOH 506 A WAT 510 3 HOH HOH 510 A WAT 511 3 HOH HOH 511 A WAT 512 3 HOH HOH 512 A WAT 513 3 HOH HOH 513 A WAT 515 3 HOH HOH 515 A WAT 516 3 HOH HOH 516 A WAT 517 3 HOH HOH 517 A WAT 518 3 HOH HOH 518 A WAT 521 3 HOH HOH 521 A WAT 522 3 HOH HOH 522 A WAT 523 3 HOH HOH 523 A WAT 524 3 HOH HOH 524 A WAT 526 3 HOH HOH 526 A WAT 527 3 HOH HOH 527 A WAT 530 3 HOH HOH 530 A WAT 531 3 HOH HOH 531 A WAT 532 3 HOH HOH 532 A WAT 533 3 HOH HOH 533 A WAT 534 3 HOH HOH 534 A WAT 536 3 HOH HOH 536 A WAT 537 3 HOH HOH 537 A WAT 539 3 HOH HOH 539 A WAT 540 3 HOH HOH 540 A WAT 541 3 HOH HOH 541 A WAT 542 3 HOH HOH 542 A WAT 543 3 HOH HOH 543 A WAT 547 3 HOH HOH 547 A WAT 551 3 HOH HOH 551 A WAT 556 3 HOH HOH 556 A WAT 562 3 HOH HOH 562 A WAT 563 3 HOH HOH 563 A WAT 564 3 HOH HOH 564 A WAT 566 3 HOH HOH 566 A WAT 568 3 HOH HOH 568 A WAT 574 3 HOH HOH 574 A WAT 577 3 HOH HOH 577 A WAT 582 3 HOH HOH 582 A WAT 583 3 HOH HOH 583 A WAT 594 3 HOH HOH 594 A WAT 603 3 HOH HOH 603 A WAT 606 3 HOH HOH 606 A WAT 801 3 HOH HOH 801 A WAT 802 3 HOH HOH 802 A WAT 803 3 HOH HOH 803 A WAT 804 3 HOH HOH 804 A WAT 805 3 HOH HOH 805 A WAT 806 3 HOH HOH 806 A WAT 807 3 HOH HOH 807 A WAT 808 3 HOH HOH 808 A WAT 809 3 HOH HOH 809 A WAT 810 3 HOH HOH 810 A WAT 811 3 HOH HOH 811 A WAT 812 3 HOH HOH 812 A WAT 813 3 HOH HOH 813 A WAT 814 3 HOH HOH 814 A WAT 815 3 HOH HOH 815 A WAT 816 3 HOH HOH 816 A WAT 817 3 HOH HOH 817 A WAT 818 3 HOH HOH 818 A WAT 819 3 HOH HOH 819 A WAT 820 3 HOH HOH 820 A WAT 821 3 HOH HOH 821 A WAT 822 3 HOH HOH 822 A WAT 823 3 HOH HOH 823 A WAT 824 3 HOH HOH 824 A WAT 825 3 HOH HOH 825 A WAT 826 3 HOH HOH 826 A WAT 827 3 HOH HOH 827 A WAT 828 3 HOH HOH 828 A WAT 829 3 HOH HOH 829 A WAT 830 3 HOH HOH 830 A WAT 831 3 HOH HOH 831 A WAT 832 3 HOH HOH 832 A WAT 833 3 HOH HOH 833 A WAT 834 3 HOH HOH 834 A WAT 835 3 HOH HOH 835 A WAT 836 3 HOH HOH 836 A WAT 837 3 HOH HOH 837 A WAT 838 3 HOH HOH 838 A WAT 839 3 HOH HOH 839 A WAT 840 3 HOH HOH 840 A WAT 841 3 HOH HOH 841 A WAT 842 3 HOH HOH 842 A WAT 843 3 HOH HOH 843 A WAT 844 3 HOH HOH 844 A WAT 845 3 HOH HOH 845 A WAT 846 3 HOH HOH 846 A WAT 847 3 HOH HOH 847 A WAT 848 3 HOH HOH 848 A WAT 849 3 HOH HOH 849 A WAT 850 3 HOH HOH 850 A WAT 851 3 HOH HOH 851 A MET 1 n 1 MET 1 A PHE 2 n 2 PHE 2 A LEU 3 n 3 LEU 3 A ILE 4 n 4 ILE 4 A ASN 5 n 5 ASN 5 A GLY 6 n 6 GLY 6 A HIS 7 n 7 HIS 7 A LYS 8 n 8 LYS 8 A GLN 9 n 9 GLN 9 A GLU 10 n 10 GLU 10 A SER 11 n 11 SER 11 A LEU 12 n 12 LEU 12 A ALA 13 n 13 ALA 13 A VAL 14 n 14 VAL 14 A SER 15 n 15 SER 15 A ASP 16 n 16 ASP 16 A ARG 17 n 17 ARG 17 A ALA 18 n 18 ALA 18 A THR 19 n 19 THR 19 A GLN 20 n 20 GLN 20 A PHE 21 n 21 PHE 21 A GLY 22 n 22 GLY 22 A ASP 23 n 23 ASP 23 A GLY 24 n 24 GLY 24 A CYS 25 n 25 CYS 25 A PHE 26 n 26 PHE 26 A THR 27 n 27 THR 27 A THR 28 n 28 THR 28 A ALA 29 n 29 ALA 29 A ARG 30 n 30 ARG 30 A VAL 31 n 31 VAL 31 A ILE 32 n 32 ILE 32 A ASP 33 n 33 ASP 33 A GLY 34 n 34 GLY 34 A LYS 35 n 35 LYS 35 A VAL 36 n 36 VAL 36 A SER 37 n 37 SER 37 A LEU 38 n 38 LEU 38 A LEU 39 n 39 LEU 39 A SER 40 n 40 SER 40 A ALA 41 n 41 ALA 41 A HIS 42 n 42 HIS 42 A ILE 43 n 43 ILE 43 A GLN 44 n 44 GLN 44 A ARG 45 n 45 ARG 45 A LEU 46 n 46 LEU 46 A GLN 47 n 47 GLN 47 A ASP 48 n 48 ASP 48 A ALA 49 n 49 ALA 49 A CYS 50 n 50 CYS 50 A GLN 51 n 51 GLN 51 A ARG 52 n 52 ARG 52 A LEU 53 n 53 LEU 53 A MET 54 n 54 MET 54 A ILE 55 n 55 ILE 55 A SER 56 n 56 SER 56 A CYS 57 n 57 CYS 57 A ASP 58 n 58 ASP 58 A PHE 59 n 59 PHE 59 A TRP 60 n 60 TRP 60 A PRO 61 n 61 PRO 61 A GLN 62 n 62 GLN 62 A LEU 63 n 63 LEU 63 A GLU 64 n 64 GLU 64 A GLN 65 n 65 GLN 65 A GLU 66 n 66 GLU 66 A MET 67 n 67 MET 67 A LYS 68 n 68 LYS 68 A THR 69 n 69 THR 69 A LEU 70 n 70 LEU 70 A ALA 71 n 71 ALA 71 A ALA 72 n 72 ALA 72 A GLU 73 n 73 GLU 73 A GLN 74 n 74 GLN 74 A GLN 75 n 75 GLN 75 A ASN 76 n 76 ASN 76 A GLY 77 n 77 GLY 77 A VAL 78 n 78 VAL 78 A LEU 79 n 79 LEU 79 A LYS 80 n 80 LYS 80 A VAL 81 n 81 VAL 81 A VAL 82 n 82 VAL 82 A ILE 83 n 83 ILE 83 A SER 84 n 84 SER 84 A ARG 85 n 85 ARG 85 A GLY 86 n 86 GLY 86 A SER 87 n 87 SER 87 A GLY 88 n 88 GLY 88 A GLY 89 n 89 GLY 89 A ARG 90 n 90 ARG 90 A GLY 91 n 91 GLY 91 A TYR 92 n 92 TYR 92 A SER 93 n 93 SER 93 A THR 94 n 94 THR 94 A LEU 95 n 95 LEU 95 A ASN 96 n 96 ASN 96 A SER 97 n 97 SER 97 A GLY 98 n 98 GLY 98 A PRO 99 n 99 PRO 99 A ALA 100 n 100 ALA 100 A THR 101 n 101 THR 101 A ARG 102 n 102 ARG 102 A ILE 103 n 103 ILE 103 A LEU 104 n 104 LEU 104 A SER 105 n 105 SER 105 A VAL 106 n 106 VAL 106 A THR 107 n 107 THR 107 A ALA 108 n 108 ALA 108 A TYR 109 n 109 TYR 109 A PRO 110 n 110 PRO 110 A ALA 111 n 111 ALA 111 A HIS 112 n 112 HIS 112 A TYR 113 n 113 TYR 113 A ASP 114 n 114 ASP 114 A ARG 115 n 115 ARG 115 A LEU 116 n 116 LEU 116 A ARG 117 n 117 ARG 117 A ASN 118 n 118 ASN 118 A GLU 119 n 119 GLU 119 A GLY 120 n 120 GLY 120 A ILE 121 n 121 ILE 121 A THR 122 n 122 THR 122 A LEU 123 n 123 LEU 123 A ALA 124 n 124 ALA 124 A LEU 125 n 125 LEU 125 A SER 126 n 126 SER 126 A PRO 127 n 127 PRO 127 A VAL 128 n 128 VAL 128 A ARG 129 n 129 ARG 129 A LEU 130 n 130 LEU 130 A GLY 131 n 131 GLY 131 A ARG 132 n 132 ARG 132 A ASN 133 n 133 ASN 133 A PRO 134 n 134 PRO 134 A HIS 135 n 135 HIS 135 A LEU 136 n 136 LEU 136 A ALA 137 n 137 ALA 137 A GLY 138 n 138 GLY 138 A ILE 139 n 139 ILE 139 A LYS 140 n 140 LYS 140 A HIS 141 n 141 HIS 141 A LEU 142 n 142 LEU 142 A ASN 143 n 143 ASN 143 A ARG 144 n 144 ARG 144 A LEU 145 n 145 LEU 145 A GLU 146 n 146 GLU 146 A GLN 147 n 147 GLN 147 A VAL 148 n 148 VAL 148 A LEU 149 n 149 LEU 149 A ILE 150 n 150 ILE 150 A ARG 151 n 151 ARG 151 A SER 152 n 152 SER 152 A HIS 153 n 153 HIS 153 A LEU 154 n 154 LEU 154 A GLU 155 n 155 GLU 155 A GLN 156 n 156 GLN 156 A THR 157 n 157 THR 157 A ASN 158 n 158 ASN 158 A ALA 159 n 159 ALA 159 A ASP 160 n 160 ASP 160 A GLU 161 n 161 GLU 161 A ALA 162 n 162 ALA 162 A LEU 163 n 163 LEU 163 A VAL 164 n 164 VAL 164 A LEU 165 n 165 LEU 165 A ASP 166 n 166 ASP 166 A SER 167 n 167 SER 167 A GLU 168 n 168 GLU 168 A GLY 169 n 169 GLY 169 A TRP 170 n 170 TRP 170 A VAL 171 n 171 VAL 171 A THR 172 n 172 THR 172 A GLU 173 n 173 GLU 173 A CYS 174 n 174 CYS 174 A CYS 175 n 175 CYS 175 A ALA 176 n 176 ALA 176 A ALA 177 n 177 ALA 177 A ASN 178 n 178 ASN 178 A LEU 179 n 179 LEU 179 A PHE 180 n 180 PHE 180 A TRP 181 n 181 TRP 181 A ARG 182 n 182 ARG 182 A LYS 183 n 183 LYS 183 A GLY 184 n 184 GLY 184 A ASN 185 n 185 ASN 185 A VAL 186 n 186 VAL 186 A VAL 187 n 187 VAL 187 A TYR 188 n 188 TYR 188 A THR 189 n 189 THR 189 A PRO 190 n 190 PRO 190 A ARG 191 n 191 ARG 191 A LEU 192 n 192 LEU 192 A ASP 193 n 193 ASP 193 A GLN 194 n 194 GLN 194 A ALA 195 n 195 ALA 195 A GLY 196 n 196 GLY 196 A VAL 197 n 197 VAL 197 A ASN 198 n 198 ASN 198 A GLY 199 n 199 GLY 199 A ILE 200 n 200 ILE 200 A MET 201 n 201 MET 201 A ARG 202 n 202 ARG 202 A GLN 203 n 203 GLN 203 A PHE 204 n 204 PHE 204 A CYS 205 n 205 CYS 205 A ILE 206 n 206 ILE 206 A ARG 207 n 207 ARG 207 A LEU 208 n 208 LEU 208 A LEU 209 n 209 LEU 209 A ALA 210 n 210 ALA 210 A GLN 211 n 211 GLN 211 A SER 212 n 212 SER 212 A SER 213 n 213 SER 213 A TYR 214 n 214 TYR 214 A GLN 215 n 215 GLN 215 A LEU 216 n 216 LEU 216 A VAL 217 n 217 VAL 217 A GLU 218 n 218 GLU 218 A VAL 219 n 219 VAL 219 A GLN 220 n 220 GLN 220 A ALA 221 n 221 ALA 221 A SER 222 n 222 SER 222 A LEU 223 n 223 LEU 223 A GLU 224 n 224 GLU 224 A GLU 225 n 225 GLU 225 A SER 226 n 226 SER 226 A LEU 227 n 227 LEU 227 A GLN 228 n 228 GLN 228 A ALA 229 n 229 ALA 229 A ASP 230 n 230 ASP 230 A GLU 231 n 231 GLU 231 A MET 232 n 232 MET 232 A VAL 233 n 233 VAL 233 A ILE 234 n 234 ILE 234 A CYS 235 n 235 CYS 235 A ASN 236 n 236 ASN 236 A ALA 237 n 237 ALA 237 A LEU 238 n 238 LEU 238 A MET 239 n 239 MET 239 A PRO 240 n 240 PRO 240 A VAL 241 n 241 VAL 241 A MET 242 n 242 MET 242 A PRO 243 n 243 PRO 243 A VAL 244 n 244 VAL 244 A CYS 245 n 245 CYS 245 A ALA 246 n 246 ALA 246 A CYS 247 n 247 CYS 247 A GLY 248 n 248 GLY 248 A ASP 249 n 249 ASP 249 A VAL 250 n 250 VAL 250 A SER 251 n 251 SER 251 A PHE 252 n 252 PHE 252 A SER 253 n 253 SER 253 A SER 254 n 254 SER 254 A ALA 255 n 255 ALA 255 A THR 256 n 256 THR 256 A LEU 257 n 257 LEU 257 A TYR 258 n 258 TYR 258 A GLU 259 n 259 GLU 259 A TYR 260 n 260 TYR 260 A LEU 261 n 261 LEU 261 A ALA 262 n 262 ALA 262 A PRO 263 n 263 PRO 263 A LEU 264 n 264 LEU 264 A CYS 265 n 265 CYS 265 A GLU 266 n 266 GLU 266 A ARG 267 n 267 ARG 267 A PRO 268 n 268 PRO 268 A ASN 269 n 269 ASN 269 A author_and_software_defined_assembly PISA,PQS 2 dimeric 5810 -31 20440 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_655 -x+1,-y,z crystal symmetry operation 39.4940000000 0.0000000000 0.0000000000 A N GLN 9 A N GLN 9 A O PHE 2 A O PHE 2 A N LEU 3 A N LEU 3 A O LEU 104 A O LEU 104 A O THR 107 A O THR 107 A N VAL 78 A N VAL 78 A N ILE 83 A N ILE 83 A O CYS 25 A O CYS 25 A N ILE 32 A N ILE 32 A O LYS 35 A O LYS 35 A O GLN 215 A O GLN 215 A N VAL 187 A N VAL 187 A N TYR 188 A N TYR 188 A O TRP 181 A O TRP 181 A N ARG 182 A N ARG 182 A O GLU 231 A O GLU 231 A O ILE 234 A O ILE 234 A N MET 242 A N MET 242 A N CYS 245 A N CYS 245 A O ILE 121 A O ILE 121 A N ALA 124 A N ALA 124 A O GLU 161 A O GLU 161 A O VAL 164 A O VAL 164 A N THR 172 A N THR 172 A O GLN 215 A O GLN 215 A N VAL 187 A N VAL 187 A N TYR 188 A N TYR 188 A O TRP 181 A O TRP 181 A N ARG 182 A N ARG 182 A O GLU 231 A O GLU 231 A O ILE 234 A O ILE 234 A N MET 242 A N MET 242 A O CYS 247 A O CYS 247 A N VAL 250 A N VAL 250 1 A PHE 21 -141.09 11.33 1 A GLN 75 73.31 -54.12 1 A PRO 110 -49.11 158.87 1 A ASN 118 -92.69 30.92 1 A GLU 119 -156.27 -14.04 1 A ASN 133 -164.24 93.21 1 A GLU 173 -170.63 -154.16 1 A ALA 255 -151.73 22.95 1 A PRO 268 -68.52 -174.93 0.275 0.183 2.3 36.00 542 9900 5 95.8 RANDOM 1 FREE R 0.0 MOLECULAR REPLACEMENT ADC LYASE 2.3 36.00 142 2243 22 0 2079 2.30 36.0 1I2L 10442 0.088 1 10.0 4.1 95.8 0.217 2.3 2.4 3.7 1 3.8 91.7 data scaling X-GEN data reduction X-GEN refinement CNS phasing CNS DEOXYCHORISMATE LYASE FROM ESCHERICHIA COLI WITH INHIBITOR 1 N N 2 N N 3 N N The second chain in the dimer is generated by the crystal two fold: Use the symmetry -x,-y,z and add one cell in X A ASP 16 A ASP 16 HELX_P A GLY 22 A GLY 22 1 1 7 A LEU 38 A LEU 38 HELX_P A LEU 53 A LEU 53 1 2 16 A PHE 59 A PHE 59 HELX_P A GLN 75 A GLN 75 1 3 17 A ALA 111 A ALA 111 HELX_P A ASN 118 A ASN 118 1 4 8 A ARG 144 A ARG 144 HELX_P A GLU 155 A GLU 155 1 5 12 A GLY 199 A GLY 199 HELX_P A SER 212 A SER 212 1 6 14 A SER 222 A SER 222 HELX_P A LEU 227 A LEU 227 1 7 6 A ALA 255 A ALA 255 HELX_P A GLU 266 A GLU 266 1 8 12 LYASE LYASE, PYRIDOXAL PHOSPHATE, AMINODEOXYCHORISMATE, PABC, D-CYCLOSERINE A GLY 98 A GLY 98 1 A PRO 99 A PRO 99 0.16 A MET 239 A MET 239 1 A PRO 240 A PRO 240 -0.22 PABC_ECOLI UNP 1 1 P28305 MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLK VVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMP VMPVCACGDVSFSSATLYEYLAPLCERPN 1 269 1I2L 1 269 P28305 A 1 1 269 6 8 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A HIS 7 A HIS 7 A GLN 9 A GLN 9 A PHE 2 A PHE 2 A ILE 4 A ILE 4 A THR 101 A THR 101 A THR 107 A THR 107 A GLY 77 A GLY 77 A SER 84 A SER 84 A GLY 24 A GLY 24 A ILE 32 A ILE 32 A LYS 35 A LYS 35 A VAL 36 A VAL 36 A GLN 215 A GLN 215 A VAL 219 A VAL 219 A VAL 186 A VAL 186 A PRO 190 A PRO 190 A ASN 178 A ASN 178 A LYS 183 A LYS 183 A GLU 231 A GLU 231 A CYS 235 A CYS 235 A VAL 241 A VAL 241 A CYS 247 A CYS 247 A ILE 121 A ILE 121 A LEU 125 A LEU 125 A GLU 161 A GLU 161 A LEU 165 A LEU 165 A VAL 171 A VAL 171 A GLU 173 A GLU 173 A GLN 215 A GLN 215 A VAL 219 A VAL 219 A VAL 186 A VAL 186 A PRO 190 A PRO 190 A ASN 178 A ASN 178 A LYS 183 A LYS 183 A GLU 231 A GLU 231 A CYS 235 A CYS 235 A VAL 241 A VAL 241 A CYS 247 A CYS 247 A VAL 250 A VAL 250 A SER 251 A SER 251 BINDING SITE FOR RESIDUE DCS A 301 A DCS 301 Software 17 A ARG 45 A ARG 45 17 1_555 A TYR 92 A TYR 92 17 2_655 A LYS 140 A LYS 140 17 1_555 A GLN 147 A GLN 147 17 1_555 A GLU 173 A GLU 173 17 1_555 A CYS 175 A CYS 175 17 1_555 A ALA 176 A ALA 176 17 1_555 A ALA 177 A ALA 177 17 1_555 A ASN 178 A ASN 178 17 1_555 A VAL 197 A VAL 197 17 1_555 A GLY 199 A GLY 199 17 1_555 A ILE 200 A ILE 200 17 1_555 A MET 201 A MET 201 17 1_555 A ASN 236 A ASN 236 17 1_555 A ALA 237 A ALA 237 17 1_555 A HOH 413 C HOH 17 1_555 A HOH 577 C HOH 17 1_555 18 P 21 21 2