0.016077 0.000000 0.000000 0.000000 0.016077 0.000000 0.000000 0.000000 0.007310 0.00000 0.00000 0.00000 Jung, S. Spinelli, S. Schimmele, B. Honegger, A. Pugliese, L. Cambillau, C. Pluckthun, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.0 90.0 90.0 62.2 62.2 136.8 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C6 H14 O2 118.174 (4S)-2-METHYL-2,4-PENTANEDIOL non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N C N 251 N C N 252 N O N 253 N C N 254 N C N 255 S C N 256 N O N 257 N C N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N N N 273 S C N 274 N C N 275 N O N 276 N C Y 277 N C Y 278 N C Y 279 N C Y 280 N C Y 281 N C Y 282 N C N 283 N O N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N N N 296 S C N 297 N C N 298 N O N 299 N C N 300 N C N 301 N C N 302 N O N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C N 317 N O N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 R C N 331 N O N 332 N C N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N N N 344 S C N 345 N C N 346 N O N 347 N C Y 348 N C Y 349 N C Y 350 N C Y 351 N N Y 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N N N 371 S C N 372 N C N 373 N O N 374 N C Y 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N C Y 380 N C N 381 N O N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 N C N 399 N C N 400 N C N 401 N O N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing Y 269 N doub Y 270 N sing Y 271 N sing N 272 N sing Y 273 N doub N 274 N sing Y 275 N doub N 276 N sing Y 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N doub N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N doub N 334 N sing N 335 N sing N 336 N sing N 337 N sing Y 338 N doub Y 339 N sing Y 340 N sing N 341 N sing Y 342 N doub Y 343 N sing Y 344 N sing N 345 N sing Y 346 N sing Y 347 N doub N 348 N sing Y 349 N doub N 350 N sing Y 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N doub N 362 N sing N 363 N sing N 364 N sing N 365 N sing Y 366 N doub Y 367 N sing Y 368 N sing N 369 N sing Y 370 N doub N 371 N sing Y 372 N doub N 373 N sing Y 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N doub N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 309 671 685 10.1006/jmbi.2001.4663 11397088 Selection, characterization and x-ray structure of anti-ampicillin single-chain Fv fragments from phage-displayed murine antibody libraries. 2001 10.2210/pdb1i3g/pdb pdb_00001i3g 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 IMAGE PLATE MARRESEARCH GRAPHITE SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 12295.677 ANTIBODY FV FRAGMENT VL DOMAIN 1 man polymer 13480.933 ANTIBODY FV FRAGMENT VH DOMAIN 1 man polymer 118.174 (4S)-2-METHYL-2,4-PENTANEDIOL 1 syn non-polymer 18.015 water 69 nat water no no DYKDIVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISN VQSEDLADYFCQQYSSYPLTFGAGTKLELKR DYKDIVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISN VQSEDLADYFCQQYSSYPLTFGAGTKLELKR L polypeptide(L) no no QVQLQQPGAELVRPGASVKLSCKASGYTFTSYWINWVKQRPGQGLEWIGNIYPSDSYTNYNQKFKDKATLTVDKSSSTAY MQLSSLTSEDSAVYFCARWGYWGQGTLVTVSAASGAHHHHH QVQLQQPGAELVRPGASVKLSCKASGYTFTSYWINWVKQRPGQGLEWIGNIYPSDSYTNYNQKFKDKATLTVDKSSSTAY MQLSSLTSEDSAVYFCARWGYWGQGTLVTVSAASGAHHHHH H polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia sample PROTEIN SELECTED BY PHAGE DISPLAY 10090 Mus musculus 562 Escherichia coli PLASMID house mouse Mus Escherichia sample PROTEIN SELECTED BY PHAGE DISPLAY 10090 Mus musculus 562 Escherichia coli PLASMID 1 2.57 52.06 VAPOR DIFFUSION, HANGING DROP 6.5 Ammonium Sulfate,potassium phosphate, MPD, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2001-10-17 1 1 2008-04-27 1 2 2011-07-13 1 3 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1h8s contains the same protein with the mutations:6E7P10G, and complexed with ampicillin 1h8o contains the same protein with the mutations:6E7P10G 1h8n contains the same protein with the mutations:6E7S9G RCSB Y RCSB 2001-02-15 REL MPD (4S)-2-METHYL-2,4-PENTANEDIOL HOH water unpublished structure from alternate crystal form Other experimental model MPD 500 3 MPD MPD 500 L HOH 401 4 HOH HOH 401 L HOH 406 4 HOH HOH 406 L HOH 407 4 HOH HOH 407 L HOH 411 4 HOH HOH 411 L HOH 414 4 HOH HOH 414 L HOH 419 4 HOH HOH 419 L HOH 420 4 HOH HOH 420 L HOH 424 4 HOH HOH 424 L HOH 425 4 HOH HOH 425 L HOH 426 4 HOH HOH 426 L HOH 427 4 HOH HOH 427 L HOH 433 4 HOH HOH 433 L HOH 436 4 HOH HOH 436 L HOH 437 4 HOH HOH 437 L HOH 438 4 HOH HOH 438 L HOH 440 4 HOH HOH 440 L HOH 442 4 HOH HOH 442 L HOH 444 4 HOH HOH 444 L HOH 446 4 HOH HOH 446 L HOH 448 4 HOH HOH 448 L HOH 450 4 HOH HOH 450 L HOH 452 4 HOH HOH 452 L HOH 459 4 HOH HOH 459 L HOH 460 4 HOH HOH 460 L HOH 461 4 HOH HOH 461 L HOH 462 4 HOH HOH 462 L HOH 463 4 HOH HOH 463 L HOH 468 4 HOH HOH 468 L HOH 473 4 HOH HOH 473 L HOH 474 4 HOH HOH 474 L HOH 402 4 HOH HOH 402 H HOH 403 4 HOH HOH 403 H HOH 404 4 HOH HOH 404 H HOH 405 4 HOH HOH 405 H HOH 408 4 HOH HOH 408 H HOH 409 4 HOH HOH 409 H HOH 410 4 HOH HOH 410 H HOH 412 4 HOH HOH 412 H HOH 413 4 HOH HOH 413 H HOH 415 4 HOH HOH 415 H HOH 416 4 HOH HOH 416 H HOH 417 4 HOH HOH 417 H HOH 418 4 HOH HOH 418 H HOH 421 4 HOH HOH 421 H HOH 422 4 HOH HOH 422 H HOH 423 4 HOH HOH 423 H HOH 428 4 HOH HOH 428 H HOH 429 4 HOH HOH 429 H HOH 430 4 HOH HOH 430 H HOH 431 4 HOH HOH 431 H HOH 432 4 HOH HOH 432 H HOH 434 4 HOH HOH 434 H HOH 439 4 HOH HOH 439 H HOH 441 4 HOH HOH 441 H HOH 443 4 HOH HOH 443 H HOH 445 4 HOH HOH 445 H HOH 447 4 HOH HOH 447 H HOH 451 4 HOH HOH 451 H HOH 453 4 HOH HOH 453 H HOH 454 4 HOH HOH 454 H HOH 455 4 HOH HOH 455 H HOH 456 4 HOH HOH 456 H HOH 457 4 HOH HOH 457 H HOH 458 4 HOH HOH 458 H HOH 465 4 HOH HOH 465 H HOH 466 4 HOH HOH 466 H HOH 467 4 HOH HOH 467 H HOH 469 4 HOH HOH 469 H HOH 471 4 HOH HOH 471 H n 1 -2 L n 2 -1 L n 3 0 L ASP 1 n 4 ASP 1 L ILE 2 n 5 ILE 2 L VAL 3 n 6 VAL 3 L LEU 4 n 7 LEU 4 L THR 5 n 8 THR 5 L GLN 6 n 9 GLN 6 L SER 7 n 10 SER 7 L HIS 8 n 11 HIS 8 L LYS 9 n 12 LYS 9 L PHE 10 n 13 PHE 10 L MET 11 n 14 MET 11 L SER 12 n 15 SER 12 L THR 13 n 16 THR 13 L SER 14 n 17 SER 14 L VAL 15 n 18 VAL 15 L GLY 16 n 19 GLY 16 L ASP 17 n 20 ASP 17 L ARG 18 n 21 ARG 18 L VAL 19 n 22 VAL 19 L SER 20 n 23 SER 20 L ILE 21 n 24 ILE 21 L THR 22 n 25 THR 22 L CYS 23 n 26 CYS 23 L LYS 24 n 27 LYS 24 L ALA 25 n 28 ALA 25 L SER 26 n 29 SER 26 L GLN 29 n 30 GLN 29 L ASP 30 n 31 ASP 30 L VAL 31 n 32 VAL 31 L GLY 32 n 33 GLY 32 L THR 39 n 34 THR 39 L ALA 40 n 35 ALA 40 L VAL 41 n 36 VAL 41 L ALA 42 n 37 ALA 42 L TRP 43 n 38 TRP 43 L TYR 44 n 39 TYR 44 L GLN 45 n 40 GLN 45 L GLN 46 n 41 GLN 46 L LYS 47 n 42 LYS 47 L PRO 48 n 43 PRO 48 L GLY 49 n 44 GLY 49 L GLN 50 n 45 GLN 50 L SER 51 n 46 SER 51 L PRO 52 n 47 PRO 52 L LYS 53 n 48 LYS 53 L LEU 54 n 49 LEU 54 L LEU 55 n 50 LEU 55 L ILE 56 n 51 ILE 56 L TYR 57 n 52 TYR 57 L TRP 58 n 53 TRP 58 L ALA 67 n 54 ALA 67 L SER 68 n 55 SER 68 L THR 69 n 56 THR 69 L ARG 70 n 57 ARG 70 L HIS 71 n 58 HIS 71 L THR 72 n 59 THR 72 L GLY 73 n 60 GLY 73 L VAL 74 n 61 VAL 74 L PRO 75 n 62 PRO 75 L ASP 76 n 63 ASP 76 L ARG 77 n 64 ARG 77 L PHE 78 n 65 PHE 78 L THR 79 n 66 THR 79 L GLY 80 n 67 GLY 80 L SER 81 n 68 SER 81 L GLY 82 n 69 GLY 82 L SER 83 n 70 SER 83 L GLY 84 n 71 GLY 84 L THR 87 n 72 THR 87 L ASP 88 n 73 ASP 88 L PHE 89 n 74 PHE 89 L THR 90 n 75 THR 90 L LEU 91 n 76 LEU 91 L THR 92 n 77 THR 92 L ILE 93 n 78 ILE 93 L SER 94 n 79 SER 94 L ASN 95 n 80 ASN 95 L VAL 96 n 81 VAL 96 L GLN 97 n 82 GLN 97 L SER 98 n 83 SER 98 L GLU 99 n 84 GLU 99 L ASP 100 n 85 ASP 100 L LEU 101 n 86 LEU 101 L ALA 102 n 87 ALA 102 L ASP 103 n 88 ASP 103 L TYR 104 n 89 TYR 104 L PHE 105 n 90 PHE 105 L CYS 106 n 91 CYS 106 L GLN 107 n 92 GLN 107 L GLN 108 n 93 GLN 108 L TYR 109 n 94 TYR 109 L SER 110 n 95 SER 110 L SER 111 n 96 SER 111 L TYR 135 n 97 TYR 135 L PRO 136 n 98 PRO 136 L LEU 137 n 99 LEU 137 L THR 138 n 100 THR 138 L PHE 139 n 101 PHE 139 L GLY 140 n 102 GLY 140 L ALA 141 n 103 ALA 141 L GLY 142 n 104 GLY 142 L THR 143 n 105 THR 143 L LYS 144 n 106 LYS 144 L LEU 145 n 107 LEU 145 L GLU 146 n 108 GLU 146 L LEU 147 n 109 LEU 147 L n 110 148 L n 111 149 L GLN 1 n 1 GLN 1 H VAL 2 n 2 VAL 2 H GLN 3 n 3 GLN 3 H LEU 4 n 4 LEU 4 H GLN 5 n 5 GLN 5 H GLN 6 n 6 GLN 6 H PRO 7 n 7 PRO 7 H GLY 9 n 8 GLY 9 H ALA 10 n 9 ALA 10 H GLU 11 n 10 GLU 11 H LEU 12 n 11 LEU 12 H VAL 13 n 12 VAL 13 H ARG 14 n 13 ARG 14 H PRO 15 n 14 PRO 15 H GLY 16 n 15 GLY 16 H ALA 17 n 16 ALA 17 H SER 18 n 17 SER 18 H VAL 19 n 18 VAL 19 H LYS 20 n 19 LYS 20 H LEU 21 n 20 LEU 21 H SER 22 n 21 SER 22 H CYS 23 n 22 CYS 23 H LYS 24 n 23 LYS 24 H ALA 25 n 24 ALA 25 H SER 26 n 25 SER 26 H GLY 27 n 26 GLY 27 H TYR 29 n 27 TYR 29 H THR 30 n 28 THR 30 H PHE 31 n 29 PHE 31 H THR 32 n 30 THR 32 H SER 33 n 31 SER 33 H TYR 39 n 32 TYR 39 H TRP 40 n 33 TRP 40 H ILE 41 n 34 ILE 41 H ASN 42 n 35 ASN 42 H TRP 43 n 36 TRP 43 H VAL 44 n 37 VAL 44 H LYS 45 n 38 LYS 45 H GLN 46 n 39 GLN 46 H ARG 47 n 40 ARG 47 H PRO 48 n 41 PRO 48 H GLY 49 n 42 GLY 49 H GLN 50 n 43 GLN 50 H GLY 51 n 44 GLY 51 H LEU 52 n 45 LEU 52 H GLU 53 n 46 GLU 53 H TRP 54 n 47 TRP 54 H ILE 55 n 48 ILE 55 H GLY 56 n 49 GLY 56 H ASN 57 n 50 ASN 57 H ILE 58 n 51 ILE 58 H TYR 59 n 52 TYR 59 H PRO 60 n 53 PRO 60 H SER 61 n 54 SER 61 H ASP 65 n 55 ASP 65 H SER 66 n 56 SER 66 H TYR 67 n 57 TYR 67 H THR 68 n 58 THR 68 H ASN 69 n 59 ASN 69 H TYR 70 n 60 TYR 70 H ASN 71 n 61 ASN 71 H GLN 72 n 62 GLN 72 H LYS 73 n 63 LYS 73 H PHE 74 n 64 PHE 74 H LYS 75 n 65 LYS 75 H ASP 76 n 66 ASP 76 H LYS 77 n 67 LYS 77 H ALA 78 n 68 ALA 78 H THR 79 n 69 THR 79 H LEU 80 n 70 LEU 80 H THR 81 n 71 THR 81 H VAL 82 n 72 VAL 82 H ASP 83 n 73 ASP 83 H LYS 84 n 74 LYS 84 H SER 85 n 75 SER 85 H SER 86 n 76 SER 86 H SER 87 n 77 SER 87 H THR 88 n 78 THR 88 H ALA 89 n 79 ALA 89 H TYR 90 n 80 TYR 90 H MET 91 n 81 MET 91 H GLN 92 n 82 GLN 92 H LEU 93 n 83 LEU 93 H SER 94 n 84 SER 94 H SER 95 n 85 SER 95 H LEU 96 n 86 LEU 96 H THR 97 n 87 THR 97 H SER 98 n 88 SER 98 H GLU 99 n 89 GLU 99 H ASP 100 n 90 ASP 100 H SER 101 n 91 SER 101 H ALA 102 n 92 ALA 102 H VAL 103 n 93 VAL 103 H TYR 104 n 94 TYR 104 H PHE 105 n 95 PHE 105 H CYS 106 n 96 CYS 106 H ALA 107 n 97 ALA 107 H ARG 108 n 98 ARG 108 H TRP 109 n 99 TRP 109 H GLY 137 n 100 GLY 137 H TYR 138 n 101 TYR 138 H TRP 139 n 102 TRP 139 H GLY 140 n 103 GLY 140 H GLN 141 n 104 GLN 141 H GLY 142 n 105 GLY 142 H THR 143 n 106 THR 143 H LEU 144 n 107 LEU 144 H VAL 145 n 108 VAL 145 H THR 146 n 109 THR 146 H VAL 147 n 110 VAL 147 H SER 148 n 111 SER 148 H n 112 149 H n 113 150 H n 114 151 H n 115 152 H n 116 153 H n 117 154 H n 118 155 H n 119 156 H n 120 157 H n 121 158 H author_and_software_defined_assembly PISA 2 dimeric 1740 -23 10250 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 L N THR 5 A N THR 8 L O LYS 24 A O LYS 27 L N CYS 23 A N CYS 26 L O PHE 89 A O PHE 74 L O THR 92 A O THR 77 L N THR 79 A N THR 66 L N THR 69 A N THR 56 L O TYR 57 A O TYR 52 L N LEU 55 A N LEU 50 L O TRP 43 A O TRP 38 L O GLN 46 A O GLN 41 L N ASP 103 A N ASP 88 L N GLN 108 A N GLN 93 L O THR 138 A O THR 100 L N THR 69 A N THR 56 L O TYR 57 A O TYR 52 L N LEU 55 A N LEU 50 L O TRP 43 A O TRP 38 L O GLN 46 A O GLN 41 L N ASP 103 A N ASP 88 L N TYR 104 A N TYR 89 L O THR 143 A O THR 105 L N GLU 146 A N GLU 108 L O MET 11 A O MET 14 H O GLN 5 B O GLN 5 H N LYS 24 B N LYS 23 H O CYS 23 B O CYS 22 H N ALA 89 B N ALA 79 H N GLN 92 B N GLN 82 H O THR 79 B O THR 69 H O ASN 69 B O ASN 59 H N ASN 57 B N ASN 50 H O ILE 58 B O ILE 51 H N ILE 41 B N ILE 34 H O GLN 46 B O GLN 39 H N VAL 103 B N VAL 93 H N ARG 108 B N ARG 98 H O TYR 138 B O TYR 101 H O ASN 69 B O ASN 59 H N ASN 57 B N ASN 50 H O ILE 58 B O ILE 51 H N ILE 41 B N ILE 34 H O GLN 46 B O GLN 39 H N VAL 103 B N VAL 93 H N TYR 104 B N TYR 94 H O THR 143 B O THR 106 H N THR 146 B N THR 109 H O GLU 11 B O GLU 10 1 L CD LYS 9 A CD LYS 12 0 Y 1 L CE LYS 9 A CE LYS 12 0 Y 1 L NZ LYS 9 A NZ LYS 12 0 Y 1 L C THR 13 A C THR 16 0 Y 1 L CG LYS 53 A CG LYS 48 0 Y 1 L CD LYS 53 A CD LYS 48 0 Y 1 L CE LYS 53 A CE LYS 48 0 Y 1 L NZ LYS 53 A NZ LYS 48 0 Y 1 L CB SER 68 A CB SER 55 0 Y 1 L N THR 72 A N THR 59 0 Y 1 L O THR 72 A O THR 59 0 Y 1 L CB THR 72 A CB THR 59 0 Y 1 L OG1 THR 72 A OG1 THR 59 0 Y 1 L CG2 THR 72 A CG2 THR 59 0 Y 1 L CG1 VAL 74 A CG1 VAL 61 0 Y 1 L CB ASP 76 A CB ASP 63 0 Y 1 L CG ASP 76 A CG ASP 63 0 Y 1 L OD1 ASP 76 A OD1 ASP 63 0 Y 1 L OD2 ASP 76 A OD2 ASP 63 0 Y 1 L CG2 THR 79 A CG2 THR 66 0 Y 1 L C SER 94 A C SER 79 0 Y 1 L O SER 94 A O SER 79 0 Y 1 L ND2 ASN 95 A ND2 ASN 80 0 Y 1 L NE2 GLN 97 A NE2 GLN 82 0 Y 1 L OE1 GLU 99 A OE1 GLU 84 0 Y 1 L O LEU 147 A O LEU 109 0 Y 1 H N GLN 1 B N GLN 1 0 Y 1 H CA GLN 1 B CA GLN 1 0 Y 1 H CG GLN 1 B CG GLN 1 0 Y 1 H CD GLN 1 B CD GLN 1 0 Y 1 H OE1 GLN 1 B OE1 GLN 1 0 Y 1 H NE2 GLN 1 B NE2 GLN 1 0 Y 1 H CG1 VAL 2 B CG1 VAL 2 0 Y 1 H OE2 GLU 11 B OE2 GLU 10 0 Y 1 H CG ARG 14 B CG ARG 13 0 Y 1 H CD ARG 14 B CD ARG 13 0 Y 1 H NE ARG 14 B NE ARG 13 0 Y 1 H NH1 ARG 14 B NH1 ARG 13 0 Y 1 H NH2 ARG 14 B NH2 ARG 13 0 Y 1 H CE LYS 24 B CE LYS 23 0 Y 1 H NZ LYS 24 B NZ LYS 23 0 Y 1 H OG SER 61 B OG SER 54 0 Y 1 H CG GLN 72 B CG GLN 62 0 Y 1 H CD GLN 72 B CD GLN 62 0 Y 1 H OE1 GLN 72 B OE1 GLN 62 0 Y 1 H NE2 GLN 72 B NE2 GLN 62 0 Y 1 H CD LYS 75 B CD LYS 65 0 Y 1 H CE LYS 75 B CE LYS 65 0 Y 1 H NZ LYS 75 B NZ LYS 65 0 Y 1 H CG GLU 99 B CG GLU 89 0 Y 1 H CD GLU 99 B CD GLU 89 0 Y 1 H OE1 GLU 99 B OE1 GLU 89 0 Y 1 H OE2 GLU 99 B OE2 GLU 89 0 Y 1 H C SER 148 B C SER 111 0 Y 1 L ASP -2 A ASP 1 1 Y 1 L TYR -1 A TYR 2 1 Y 1 L LYS 0 A LYS 3 1 Y 1 L LYS 148 A LYS 110 1 Y 1 L ARG 149 A ARG 111 1 Y 1 H ALA 149 B ALA 112 1 Y 1 H ALA 150 B ALA 113 1 Y 1 H SER 151 B SER 114 1 Y 1 H GLY 152 B GLY 115 1 Y 1 H ALA 153 B ALA 116 1 Y 1 H HIS 154 B HIS 117 1 Y 1 H HIS 155 B HIS 118 1 Y 1 H HIS 156 B HIS 119 1 Y 1 H HIS 157 B HIS 120 1 Y 1 H HIS 158 B HIS 121 1 Y 1 11.16 1.60 122.70 133.86 H H H O C N GLN GLN GLN 5 5 6 Y 1 L SER 7 -41.09 -70.26 1 L THR 13 174.83 164.97 1 L VAL 15 -38.55 141.19 1 L ALA 67 68.83 -46.35 1 L THR 72 -55.41 104.28 1 L ALA 102 -174.63 -177.07 1 H ALA 102 -175.10 -177.26 0 0 0 0 0 0 0.243 0.175 2.44 15. 9323 RANDOM 1 Isotropic THROUGHOUT 0 0 MOLECULAR REPLACEMENT anti-N9-neuraminidase antibody NC41/anti-lysozyme antibody D11.15 Engh & Huber 2.44 15. 77 1770 0 0 1693 0.008 1.81 1.21 2.44 20.0 1I3G 41050 9809 2 2 0.07 1 11 89.2 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement X-PLOR 3.851 CRYSTAL STRUCTURE OF AN AMPICILLIN SINGLE CHAIN FV, FORM 1, FREE 1 N N 2 N N 3 N N 4 N N 4 N N L GLN 97 A GLN 82 HELX_P L LEU 101 A LEU 86 5 1 5 H THR 30 B THR 28 HELX_P H TYR 39 B TYR 32 5 2 5 H THR 97 B THR 87 HELX_P H SER 101 B SER 91 5 3 5 disulf 2.019 L CYS 23 A SG CYS 26 1_555 L CYS 106 A SG CYS 91 1_555 disulf 2.032 H CYS 23 B SG CYS 22 1_555 H CYS 106 B SG CYS 96 1_555 ANTIBIOTIC ANTIBODY FV FRAGMENT, antibiotic L TYR 135 A TYR 97 1 L PRO 136 A PRO 98 -0.89 1I3G PDB 1 1I3G 1I3G PDB 2 1I3G -2 149 1I3G -2 149 1I3G L 1 1 111 1 158 1I3G 1 158 1I3G H 2 1 121 4 5 6 4 5 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel L LEU 4 A LEU 7 L GLN 6 A GLN 9 L VAL 19 A VAL 22 L ALA 25 A ALA 28 L ASP 88 A ASP 73 L ILE 93 A ILE 78 L PHE 78 A PHE 65 L SER 83 A SER 70 L THR 69 A THR 56 L ARG 70 A ARG 57 L LYS 53 A LYS 48 L TYR 57 A TYR 52 L VAL 41 A VAL 36 L GLN 46 A GLN 41 L ASP 103 A ASP 88 L GLN 108 A GLN 93 L THR 138 A THR 100 L PHE 139 A PHE 101 L THR 69 A THR 56 L ARG 70 A ARG 57 L LYS 53 A LYS 48 L TYR 57 A TYR 52 L VAL 41 A VAL 36 L GLN 46 A GLN 41 L ASP 103 A ASP 88 L GLN 108 A GLN 93 L THR 143 A THR 105 L GLU 146 A GLU 108 L PHE 10 A PHE 13 L SER 12 A SER 15 H GLN 3 B GLN 3 H GLN 5 B GLN 5 H VAL 19 B VAL 18 H SER 26 B SER 25 H THR 88 B THR 78 H LEU 93 B LEU 83 H ALA 78 B ALA 68 H ASP 83 B ASP 73 H THR 68 B THR 58 H TYR 70 B TYR 60 H LEU 52 B LEU 45 H ILE 58 B ILE 51 H ILE 41 B ILE 34 H GLN 46 B GLN 39 H ALA 102 B ALA 92 H ARG 108 B ARG 98 H TYR 138 B TYR 101 H TRP 139 B TRP 102 H THR 68 B THR 58 H TYR 70 B TYR 60 H LEU 52 B LEU 45 H ILE 58 B ILE 51 H ILE 41 B ILE 34 H GLN 46 B GLN 39 H ALA 102 B ALA 92 H ARG 108 B ARG 98 H THR 143 B THR 106 H VAL 147 B VAL 110 H ALA 10 B ALA 9 H VAL 13 B VAL 12 BINDING SITE FOR RESIDUE MPD L 500 L MPD 500 Software 6 H ASN 42 B ASN 35 6 1_555 H TRP 139 B TRP 102 6 1_555 L TYR 44 A TYR 39 6 1_555 L GLN 107 A GLN 92 6 1_555 L TYR 109 A TYR 94 6 1_555 L HOH 436 D HOH 6 1_555 92 P 41 21 2