1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Kobashigawa, Y.
Tsuda, S.
Nitta, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Solution structure of Ca2+-bound state of canine milk lysozyme
10.2210/pdb1i56/pdb
pdb_00001i56
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
14577.523
LYSOZYME C
3.2.1.17
ADDITIONAL N-TERMINAL SER
1
man
polymer
no
no
SKIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLNSKWWCKSNSHSSANACNIM
CSKFLDDNIDDDIACAKRVVKDPNGMSAWVAWVKHCKGKDLSKYLASCNL
SKIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLNSKWWCKSNSHSSANACNIM
CSKFLDDNIDDDIACAKRVVKDPNGMSAWVAWVKHCKGKDLSKYLASCNL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
dog
Canis
Canis lupus
familiaris
MILK
Escherichia
sample
9615
MAMMARY GLAND
Canis lupus familiaris
562
Escherichia coli
BACTERIA
PLASMID
PSCREEN 1-B(+)
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2002-02-27
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2001-02-25
REL
1
4.5
ambient
303
K
simulated annealing
Brunger
structure solution
X-PLOR
3.851
Brunger
refinement
X-PLOR
3.851
500
Varian
INOVA
SER
1
n
1
SER
1
A
LYS
2
n
2
LYS
2
A
ILE
3
n
3
ILE
3
A
PHE
4
n
4
PHE
4
A
SER
5
n
5
SER
5
A
LYS
6
n
6
LYS
6
A
CYS
7
n
7
CYS
7
A
GLU
8
n
8
GLU
8
A
LEU
9
n
9
LEU
9
A
ALA
10
n
10
ALA
10
A
ARG
11
n
11
ARG
11
A
LYS
12
n
12
LYS
12
A
LEU
13
n
13
LEU
13
A
LYS
14
n
14
LYS
14
A
SER
15
n
15
SER
15
A
MET
16
n
16
MET
16
A
GLY
17
n
17
GLY
17
A
MET
18
n
18
MET
18
A
ASP
19
n
19
ASP
19
A
GLY
20
n
20
GLY
20
A
PHE
21
n
21
PHE
21
A
HIS
22
n
22
HIS
22
A
GLY
23
n
23
GLY
23
A
TYR
24
n
24
TYR
24
A
SER
25
n
25
SER
25
A
LEU
26
n
26
LEU
26
A
ALA
27
n
27
ALA
27
A
ASN
28
n
28
ASN
28
A
TRP
29
n
29
TRP
29
A
VAL
30
n
30
VAL
30
A
CYS
31
n
31
CYS
31
A
MET
32
n
32
MET
32
A
ALA
33
n
33
ALA
33
A
GLU
34
n
34
GLU
34
A
TYR
35
n
35
TYR
35
A
GLU
36
n
36
GLU
36
A
SER
37
n
37
SER
37
A
ASN
38
n
38
ASN
38
A
PHE
39
n
39
PHE
39
A
ASN
40
n
40
ASN
40
A
THR
41
n
41
THR
41
A
GLN
42
n
42
GLN
42
A
ALA
43
n
43
ALA
43
A
PHE
44
n
44
PHE
44
A
ASN
45
n
45
ASN
45
A
GLY
46
n
46
GLY
46
A
ARG
47
n
47
ARG
47
A
ASN
48
n
48
ASN
48
A
SER
49
n
49
SER
49
A
ASN
50
n
50
ASN
50
A
GLY
51
n
51
GLY
51
A
SER
52
n
52
SER
52
A
SER
53
n
53
SER
53
A
ASP
54
n
54
ASP
54
A
TYR
55
n
55
TYR
55
A
GLY
56
n
56
GLY
56
A
ILE
57
n
57
ILE
57
A
PHE
58
n
58
PHE
58
A
GLN
59
n
59
GLN
59
A
LEU
60
n
60
LEU
60
A
ASN
61
n
61
ASN
61
A
SER
62
n
62
SER
62
A
LYS
63
n
63
LYS
63
A
TRP
64
n
64
TRP
64
A
TRP
65
n
65
TRP
65
A
CYS
66
n
66
CYS
66
A
LYS
67
n
67
LYS
67
A
SER
68
n
68
SER
68
A
ASN
69
n
69
ASN
69
A
SER
70
n
70
SER
70
A
HIS
71
n
71
HIS
71
A
SER
72
n
72
SER
72
A
SER
73
n
73
SER
73
A
ALA
74
n
74
ALA
74
A
ASN
75
n
75
ASN
75
A
ALA
76
n
76
ALA
76
A
CYS
77
n
77
CYS
77
A
ASN
78
n
78
ASN
78
A
ILE
79
n
79
ILE
79
A
MET
80
n
80
MET
80
A
CYS
81
n
81
CYS
81
A
SER
82
n
82
SER
82
A
LYS
83
n
83
LYS
83
A
PHE
84
n
84
PHE
84
A
LEU
85
n
85
LEU
85
A
ASP
86
n
86
ASP
86
A
ASP
87
n
87
ASP
87
A
ASN
88
n
88
ASN
88
A
ILE
89
n
89
ILE
89
A
ASP
90
n
90
ASP
90
A
ASP
91
n
91
ASP
91
A
ASP
92
n
92
ASP
92
A
ILE
93
n
93
ILE
93
A
ALA
94
n
94
ALA
94
A
CYS
95
n
95
CYS
95
A
ALA
96
n
96
ALA
96
A
LYS
97
n
97
LYS
97
A
ARG
98
n
98
ARG
98
A
VAL
99
n
99
VAL
99
A
VAL
100
n
100
VAL
100
A
LYS
101
n
101
LYS
101
A
ASP
102
n
102
ASP
102
A
PRO
103
n
103
PRO
103
A
ASN
104
n
104
ASN
104
A
GLY
105
n
105
GLY
105
A
MET
106
n
106
MET
106
A
SER
107
n
107
SER
107
A
ALA
108
n
108
ALA
108
A
TRP
109
n
109
TRP
109
A
VAL
110
n
110
VAL
110
A
ALA
111
n
111
ALA
111
A
TRP
112
n
112
TRP
112
A
VAL
113
n
113
VAL
113
A
LYS
114
n
114
LYS
114
A
HIS
115
n
115
HIS
115
A
CYS
116
n
116
CYS
116
A
LYS
117
n
117
LYS
117
A
GLY
118
n
118
GLY
118
A
LYS
119
n
119
LYS
119
A
ASP
120
n
120
ASP
120
A
LEU
121
n
121
LEU
121
A
SER
122
n
122
SER
122
A
LYS
123
n
123
LYS
123
A
TYR
124
n
124
TYR
124
A
LEU
125
n
125
LEU
125
A
ALA
126
n
126
ALA
126
A
SER
127
n
127
SER
127
A
CYS
128
n
128
CYS
128
A
ASN
129
n
129
ASN
129
A
LEU
130
n
130
LEU
130
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
TYR
55
A
O
TYR
55
A
N
LEU
60
A
N
LEU
60
1
A
ARG
11
0.316
SIDE CHAIN
1
A
ARG
47
0.313
SIDE CHAIN
1
A
ARG
98
0.291
SIDE CHAIN
1
A
LYS
2
-58.91
-172.60
1
A
SER
25
-59.65
172.47
1
A
PHE
39
57.25
18.91
1
A
ASN
48
-117.69
-161.54
1
A
LYS
63
-158.74
-29.22
1
A
TRP
65
-158.98
21.26
1
A
SER
68
-144.70
-155.70
1
A
SER
70
-89.83
40.06
1
A
SER
72
65.60
161.31
1
A
LYS
83
-93.13
54.87
1
A
ILE
89
-101.70
52.97
1
A
CYS
116
-156.24
-68.14
1
A
TYR
124
-70.44
-105.83
1
A
ASN
129
38.11
-150.96
SOLUTION STRUCTURE OF CA2+-BOUND STATE OF CANINE MILK LYSOZYME
1
N
N
A
SER
5
A
SER
5
HELX_P
A
GLY
17
A
GLY
17
1
1
13
A
SER
25
A
SER
25
HELX_P
A
GLU
36
A
GLU
36
1
2
12
A
ASP
90
A
ASP
90
HELX_P
A
ASP
102
A
ASP
102
1
3
13
A
ASN
104
A
ASN
104
HELX_P
A
ALA
108
A
ALA
108
5
4
5
A
TRP
109
A
TRP
109
HELX_P
A
CYS
116
A
CYS
116
1
5
8
A
TYR
124
A
TYR
124
HELX_P
A
CYS
128
A
CYS
128
5
6
5
disulf
2.016
A
CYS
31
A
SG
CYS
31
1_555
A
CYS
116
A
SG
CYS
116
1_555
disulf
2.020
A
CYS
66
A
SG
CYS
66
1_555
A
CYS
81
A
SG
CYS
81
1_555
disulf
2.023
A
CYS
77
A
SG
CYS
77
1_555
A
CYS
95
A
SG
CYS
95
1_555
HYDROLASE
CALCIUM BINDING LYSOZYME, ENZYME, HYDROLASE
LYSC1_CANFA
UNP
1
1
P81708
KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLNSKWWCKSNSHSSANACNIMC
SKFLDDNIDDDIACAKRVVKDPNGMSAWVAWVKHCKGKDLSKYLASCNL
1
129
1I56
2
130
P81708
A
1
2
130
1
cloning artifact
SER
1
1I56
A
P81708
UNP
1
2
anti-parallel
A
ASP
54
A
ASP
54
A
TYR
55
A
TYR
55
A
LEU
60
A
LEU
60
A
ASN
61
A
ASN
61