1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Jablonsky, M.J. Jackson, P.L. Krishna, N.R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 C3 H7 N O2 89.093 y ALANINE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 40 8273 8282 10.1021/bi010223h 11444973 Solution structure of an insect-specific neurotoxin from the New World scorpion Centruroides sculpturatus Ewing. 2001 10.2210/pdb1i6g/pdb pdb_00001i6g 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 6370.235 NEUROTOXIN V-5 1 nat polymer CSE-V5 no no KDGYPVDSKGCKLSCVANNYCDNQCKMKKASGGHCYAMSCYCEGLPENAKVSDSATNICG KDGYPVDSKGCKLSCVANNYCDNQCKMKKASGGHCYAMSCYCEGLPENAKVSDSATNICG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n bark scorpion Centruroides sample 218467 Centruroides sculpturatus 5 database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2001-08-01 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name Neurotoxin CsE-V Neurotoxin CsE-I Neurotoxin CsE-v5 minimized average structure SEQUENCE The authors have found that the previously published sequence (PIR C23727) was incorrect. They have demonstrated the existence of an additional Gly, 60, from sequencing, NMR, and mass spec. (Data included in the primary citation article). RCSB Y RCSB 2001-03-02 REL REL This structure was determined using standard homonuclear 2D-NMR techniques. target function 30 20 2D NOESY TOCSY 2D NOESY DQF-COSY 4.0 ambient 303 K The structures are based on 1010 total restraints: 849 distance, 70 H-bonds, 91 dihedral angle distance geometry simulated annealing 1mM CsE-v5, pH 4.0 90% H20, 10% D2O 1mM CsE-v5, pH 4.0 100% D2O Bruker collection DISNMR disr88 Biosym processing Felix 9.80 Brunger refinement X-PLOR 3.851 600 Bruker AM LYS 1 n 1 LYS 1 A ASP 2 n 2 ASP 2 A GLY 3 n 3 GLY 3 A TYR 4 n 4 TYR 4 A PRO 5 n 5 PRO 5 A VAL 6 n 6 VAL 6 A ASP 7 n 7 ASP 7 A SER 8 n 8 SER 8 A LYS 9 n 9 LYS 9 A GLY 10 n 10 GLY 10 A CYS 11 n 11 CYS 11 A LYS 12 n 12 LYS 12 A LEU 13 n 13 LEU 13 A SER 14 n 14 SER 14 A CYS 15 n 15 CYS 15 A VAL 16 n 16 VAL 16 A ALA 17 n 17 ALA 17 A ASN 18 n 18 ASN 18 A ASN 19 n 19 ASN 19 A TYR 20 n 20 TYR 20 A CYS 21 n 21 CYS 21 A ASP 22 n 22 ASP 22 A ASN 23 n 23 ASN 23 A GLN 24 n 24 GLN 24 A CYS 25 n 25 CYS 25 A LYS 26 n 26 LYS 26 A MET 27 n 27 MET 27 A LYS 28 n 28 LYS 28 A LYS 29 n 29 LYS 29 A ALA 30 n 30 ALA 30 A SER 31 n 31 SER 31 A GLY 32 n 32 GLY 32 A GLY 33 n 33 GLY 33 A HIS 34 n 34 HIS 34 A CYS 35 n 35 CYS 35 A TYR 36 n 36 TYR 36 A ALA 37 n 37 ALA 37 A MET 38 n 38 MET 38 A SER 39 n 39 SER 39 A CYS 40 n 40 CYS 40 A TYR 41 n 41 TYR 41 A CYS 42 n 42 CYS 42 A GLU 43 n 43 GLU 43 A GLY 44 n 44 GLY 44 A LEU 45 n 45 LEU 45 A PRO 46 n 46 PRO 46 A GLU 47 n 47 GLU 47 A ASN 48 n 48 ASN 48 A ALA 49 n 49 ALA 49 A LYS 50 n 50 LYS 50 A VAL 51 n 51 VAL 51 A SER 52 n 52 SER 52 A ASP 53 n 53 ASP 53 A SER 54 n 54 SER 54 A ALA 55 n 55 ALA 55 A THR 56 n 56 THR 56 A ASN 57 n 57 ASN 57 A ILE 58 n 58 ILE 58 A CYS 59 n 59 CYS 59 A GLY 60 n 60 GLY 60 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 36 A N TYR 36 A O SER 39 A O SER 39 A N CYS 42 A N CYS 42 A O GLY 3 A O GLY 3 A O TYR 4 A O TYR 4 A N SER 52 A N SER 52 2 A A H O SER GLU 31 43 1.58 6 A A O H LYS LEU 1 45 1.60 7 A A O H CYS CYS 21 25 1.57 11 A A O H PRO ALA 46 49 1.60 12 A A HG O SER THR 54 56 1.51 13 A A H1 O LYS LEU 1 45 1.55 14 A A H O SER GLU 31 43 1.60 16 A A H O SER GLU 31 43 1.60 18 A A H3 O LYS LEU 1 45 1.56 19 A A OD1 H ASP GLY 7 10 1.58 1 A ASP 7 -106.75 -164.53 1 A LYS 28 -90.67 43.25 1 A LYS 29 43.91 27.36 1 A SER 31 -139.43 -36.95 1 A MET 38 59.23 11.98 1 A LYS 50 -104.35 77.05 1 A ILE 58 -105.36 60.73 2 A LYS 28 -95.27 34.10 3 A THR 56 -142.88 54.71 4 A VAL 16 -158.33 -36.95 4 A LYS 29 73.17 42.33 4 A THR 56 -99.01 56.53 5 A LYS 12 -56.77 173.53 5 A SER 31 -134.40 -40.04 5 A MET 38 52.59 18.43 7 A ASP 7 -104.18 -168.64 7 A LYS 12 -48.03 159.34 7 A LYS 29 70.38 43.02 7 A LEU 45 -43.26 169.88 7 A THR 56 -150.08 55.54 8 A SER 14 -37.37 135.97 8 A LYS 28 -99.02 39.49 8 A LYS 29 58.74 19.36 8 A MET 38 53.87 16.31 8 A ASP 53 -99.10 32.14 8 A ILE 58 -109.87 51.69 9 A LEU 45 -48.59 167.55 10 A MET 38 59.70 17.36 11 A ASP 7 -109.96 -164.78 11 A LYS 28 -92.97 43.18 11 A LEU 45 -42.41 162.09 12 A VAL 16 -143.67 -36.71 12 A LYS 28 -94.05 34.85 12 A ILE 58 -114.86 56.59 13 A LYS 28 -87.70 33.75 13 A MET 38 57.21 17.84 13 A LEU 45 -41.50 160.23 14 A LYS 28 -84.22 42.85 14 A THR 56 -144.10 53.70 14 A CYS 59 -92.45 -139.64 15 A ASP 7 -106.34 -169.93 15 A THR 56 -160.35 95.23 15 A CYS 59 -121.97 -165.58 16 A ASP 7 -108.45 -168.23 16 A MET 38 59.28 14.29 16 A LEU 45 -48.42 163.11 17 A SER 31 -138.69 -37.90 17 A ASP 53 -86.13 31.95 17 A CYS 59 -89.29 41.58 19 A LYS 50 -103.53 74.87 20 A MET 38 57.96 16.59 20 A ILE 58 -106.96 63.74 NMR SOLUTION STRUCTURE OF THE INSECT-SPECIFIC NEUROTOXIN VARIANT 5 (CSE-V5) FROM THE SCORPION CENTRUROIDES SCULPTURATUS EWING 1 N N A ALA 17 A ALA 17 HELX_P A LYS 28 A LYS 28 1 1 12 disulf 2.019 A CYS 11 A SG CYS 11 1_555 A CYS 59 A SG CYS 59 1_555 disulf 2.022 A CYS 15 A SG CYS 15 1_555 A CYS 35 A SG CYS 35 1_555 disulf 2.020 A CYS 21 A SG CYS 21 1_555 A CYS 40 A SG CYS 40 1_555 disulf 2.020 A CYS 25 A SG CYS 25 1_555 A CYS 42 A SG CYS 42 1_555 TOXIN scorpion, neurotoxin, sodium channel, alpha helix, beta sheet, disulfide linkages, TOXIN SCX5_CENSC UNP 1 1 P58779 KDGYPVDSKGCKLSCVANNYCDNQCKMKKASGGHCYAMSCYCEGLPENAKVSDSATNIC 1 59 1I6G 1 59 P58779 A 1 1 59 1 SEE REMARK 999 GLY 60 1I6G A P58779 UNP 60 4 anti-parallel anti-parallel anti-parallel A GLY 32 A GLY 32 A TYR 36 A TYR 36 A SER 39 A SER 39 A GLU 43 A GLU 43 A ASP 2 A ASP 2 A PRO 5 A PRO 5 A VAL 51 A VAL 51 A SER 52 A SER 52