0.018428
0.000000
0.000000
0.000000
0.006819
0.000000
0.000000
0.000000
0.021410
0.00000
0.00000
0.00000
Cote, M.L.
Georgiadis, M.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
54.264
146.648
46.708
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
N
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
N
Y
287
N
C
Y
288
N
C
Y
289
N
N
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
S
C
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
N
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
S
N
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
N
421
N
C
N
422
N
C
N
423
N
O
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
N
N
434
S
C
N
435
N
C
N
436
N
O
N
437
N
C
N
438
N
O
N
439
N
O
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
N
N
448
S
C
N
449
N
C
N
450
N
O
N
451
R
C
N
452
N
O
N
453
N
C
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
N
N
465
S
C
N
466
N
C
N
467
N
O
N
468
N
C
Y
469
N
C
Y
470
N
C
Y
471
N
C
Y
472
N
N
Y
473
N
C
Y
474
N
C
Y
475
N
C
Y
476
N
C
Y
477
N
C
N
478
N
O
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
N
N
492
S
C
N
493
N
C
N
494
N
O
N
495
N
C
Y
496
N
C
Y
497
N
C
Y
498
N
C
Y
499
N
C
Y
500
N
C
Y
501
N
C
N
502
N
O
N
503
N
O
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
N
N
516
S
C
N
517
N
C
N
518
N
O
N
519
N
C
N
520
N
C
N
521
N
C
N
522
N
O
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
sing
Y
290
N
doub
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
Y
397
N
doub
Y
398
N
sing
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
Y
466
N
doub
Y
467
N
sing
Y
468
N
sing
N
469
N
sing
Y
470
N
doub
Y
471
N
sing
Y
472
N
sing
N
473
N
sing
Y
474
N
sing
Y
475
N
doub
N
476
N
sing
Y
477
N
doub
N
478
N
sing
Y
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
doub
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
Y
494
N
doub
Y
495
N
sing
Y
496
N
sing
N
497
N
sing
Y
498
N
doub
N
499
N
sing
Y
500
N
doub
N
501
N
sing
Y
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
doub
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
57
1238
1250
10.1107/S090744490100943X
11526315
Structure of a pseudo-16-mer DNA with stacked guanines and two G-A mispairs complexed with the N-terminal fragment of Moloney murine leukemia virus reverse transcriptase.
2001
10.2210/pdb1i6j/pdb
pdb_00001i6j
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
108.0
1
mirrors
IMAGE PLATE
2000-02-28
RIGAKU RAXIS IV
Ni FILTER
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
1800.203
5'-D(*GP*TP*CP*GP*TP*C)-3'
1
syn
polymer
3079.031
5'-D(*AP*CP*GP*GP*GP*AP*CP*GP*AP*C)-3'
1
syn
polymer
29065.480
REVERSE TRANSCRIPTASE
2.7.7.49
N-TERMINAL FRAGMENT
1
man
polymer
18.015
water
204
nat
water
no
no
(DG)(DT)(DC)(DG)(DT)(DC)
GTCGTC
B
polydeoxyribonucleotide
no
no
(DA)(DC)(DG)(DG)(DG)(DA)(DC)(DG)(DA)(DC)
ACGGGACGAC
C
polydeoxyribonucleotide
no
no
MTWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVK
KPGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQ
LTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKAQIC
QKQVKYLGYLLKEGQR
MTWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVK
KPGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQ
LTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKAQIC
QKQVKYLGYLLKEGQR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Gammaretrovirus
Murine leukemia virus
Escherichia
Escherichia coli
sample
VIRUS
11801
Moloney murine leukemia virus
511693
Escherichia coli BL21
BL21
PLASMID
PET15B
1
2.72
54.74
VAPOR DIFFUSION, HANGING DROP
6.5
PEG 4000, NaCl, ADA, MgCl2, HEPES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
PEG 4000
1
NaCl
1
ADA
1
MgCl2
1
HEPES
1
-17.614
1
19
B
1
C
16
-4.957
B_DG1:DC16_C
1
-6.893
-0.405
-0.047
-0.180
-15.543
1
20
B
2
C
15
1.039
B_DT2:DA15_C
2
-9.130
-0.366
0.500
-0.142
-3.449
1
19
B
3
C
14
1.067
B_DC3:DG14_C
3
-4.361
0.677
-0.410
0.034
1.706
1
19
B
4
C
13
-2.582
B_DG4:DC13_C
4
-0.247
0.730
0.553
0.006
10.871
1
20
B
5
C
12
-7.839
B_DT5:DA12_C
5
-3.449
0.946
0.512
-0.035
3.078
34.866
B
B
1
2
9.875
C
C
16
15
3.211
5.882
0.156
-0.376
BB_DG1DT2:DA15DC16_CC
1
-3.368
5.656
34.221
-1.495
-0.756
2.886
38.353
B
B
2
3
-2.886
C
C
15
14
2.912
-1.881
0.190
-0.071
BB_DT2DC3:DG14DA15_CC
2
8.480
-13.012
37.392
0.103
0.663
3.404
35.825
B
B
3
4
7.614
C
C
14
13
3.202
4.619
-1.033
0.563
BB_DC3DG4:DC13DG14_CC
3
-9.429
15.543
34.300
0.230
0.280
3.227
34.253
B
B
4
5
1.228
C
C
13
12
3.246
0.723
0.260
-1.192
BB_DG4DT5:DA12DC13_CC
4
0.875
-1.485
34.235
-2.137
-0.306
database_2
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Database references
Data collection
Refinement description
1
0
2001-09-07
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-12-21
1
4
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
1D1U contains the same protein.
RCSB
Y
RCSB
2001-03-02
REL
REL
HOH
water
ABI 392 DNA Synthesizer
sample
ABI 392 DNA Synthesizer
sample
1D1U
PDB ENTRY 1D1U
PDB
experimental model
HOH
195
4
HOH
HOH
195
B
HOH
92
4
HOH
HOH
92
C
HOH
93
4
HOH
HOH
93
C
HOH
148
4
HOH
HOH
148
C
HOH
153
4
HOH
HOH
153
C
HOH
197
4
HOH
HOH
197
C
HOH
198
4
HOH
HOH
198
C
HOH
1
4
HOH
HOH
279
A
HOH
2
4
HOH
HOH
280
A
HOH
3
4
HOH
HOH
281
A
HOH
4
4
HOH
HOH
282
A
HOH
5
4
HOH
HOH
283
A
HOH
6
4
HOH
HOH
284
A
HOH
7
4
HOH
HOH
285
A
HOH
8
4
HOH
HOH
286
A
HOH
9
4
HOH
HOH
287
A
HOH
10
4
HOH
HOH
288
A
HOH
11
4
HOH
HOH
289
A
HOH
12
4
HOH
HOH
290
A
HOH
13
4
HOH
HOH
291
A
HOH
14
4
HOH
HOH
292
A
HOH
15
4
HOH
HOH
293
A
HOH
16
4
HOH
HOH
294
A
HOH
17
4
HOH
HOH
295
A
HOH
18
4
HOH
HOH
296
A
HOH
19
4
HOH
HOH
297
A
HOH
20
4
HOH
HOH
298
A
HOH
21
4
HOH
HOH
299
A
HOH
22
4
HOH
HOH
300
A
HOH
23
4
HOH
HOH
301
A
HOH
24
4
HOH
HOH
302
A
HOH
25
4
HOH
HOH
303
A
HOH
26
4
HOH
HOH
304
A
HOH
27
4
HOH
HOH
305
A
HOH
28
4
HOH
HOH
306
A
HOH
29
4
HOH
HOH
307
A
HOH
30
4
HOH
HOH
308
A
HOH
31
4
HOH
HOH
309
A
HOH
32
4
HOH
HOH
310
A
HOH
33
4
HOH
HOH
311
A
HOH
34
4
HOH
HOH
312
A
HOH
35
4
HOH
HOH
313
A
HOH
36
4
HOH
HOH
314
A
HOH
37
4
HOH
HOH
315
A
HOH
38
4
HOH
HOH
316
A
HOH
39
4
HOH
HOH
317
A
HOH
40
4
HOH
HOH
318
A
HOH
41
4
HOH
HOH
319
A
HOH
42
4
HOH
HOH
320
A
HOH
43
4
HOH
HOH
321
A
HOH
44
4
HOH
HOH
322
A
HOH
45
4
HOH
HOH
323
A
HOH
46
4
HOH
HOH
324
A
HOH
47
4
HOH
HOH
325
A
HOH
48
4
HOH
HOH
326
A
HOH
49
4
HOH
HOH
327
A
HOH
50
4
HOH
HOH
328
A
HOH
51
4
HOH
HOH
329
A
HOH
52
4
HOH
HOH
330
A
HOH
53
4
HOH
HOH
331
A
HOH
54
4
HOH
HOH
332
A
HOH
55
4
HOH
HOH
333
A
HOH
56
4
HOH
HOH
334
A
HOH
57
4
HOH
HOH
335
A
HOH
58
4
HOH
HOH
336
A
HOH
59
4
HOH
HOH
337
A
HOH
60
4
HOH
HOH
338
A
HOH
61
4
HOH
HOH
339
A
HOH
62
4
HOH
HOH
340
A
HOH
63
4
HOH
HOH
341
A
HOH
64
4
HOH
HOH
342
A
HOH
65
4
HOH
HOH
343
A
HOH
66
4
HOH
HOH
344
A
HOH
67
4
HOH
HOH
345
A
HOH
68
4
HOH
HOH
346
A
HOH
69
4
HOH
HOH
347
A
HOH
70
4
HOH
HOH
348
A
HOH
71
4
HOH
HOH
349
A
HOH
72
4
HOH
HOH
350
A
HOH
73
4
HOH
HOH
351
A
HOH
74
4
HOH
HOH
352
A
HOH
75
4
HOH
HOH
353
A
HOH
76
4
HOH
HOH
354
A
HOH
77
4
HOH
HOH
355
A
HOH
78
4
HOH
HOH
356
A
HOH
79
4
HOH
HOH
357
A
HOH
80
4
HOH
HOH
358
A
HOH
81
4
HOH
HOH
359
A
HOH
82
4
HOH
HOH
360
A
HOH
83
4
HOH
HOH
361
A
HOH
84
4
HOH
HOH
362
A
HOH
85
4
HOH
HOH
363
A
HOH
86
4
HOH
HOH
364
A
HOH
87
4
HOH
HOH
365
A
HOH
88
4
HOH
HOH
366
A
HOH
89
4
HOH
HOH
367
A
HOH
90
4
HOH
HOH
368
A
HOH
91
4
HOH
HOH
369
A
HOH
94
4
HOH
HOH
370
A
HOH
95
4
HOH
HOH
371
A
HOH
96
4
HOH
HOH
372
A
HOH
97
4
HOH
HOH
373
A
HOH
98
4
HOH
HOH
374
A
HOH
99
4
HOH
HOH
375
A
HOH
100
4
HOH
HOH
376
A
HOH
101
4
HOH
HOH
377
A
HOH
102
4
HOH
HOH
378
A
HOH
103
4
HOH
HOH
379
A
HOH
104
4
HOH
HOH
380
A
HOH
105
4
HOH
HOH
381
A
HOH
106
4
HOH
HOH
382
A
HOH
107
4
HOH
HOH
383
A
HOH
108
4
HOH
HOH
384
A
HOH
109
4
HOH
HOH
385
A
HOH
110
4
HOH
HOH
386
A
HOH
111
4
HOH
HOH
387
A
HOH
112
4
HOH
HOH
388
A
HOH
113
4
HOH
HOH
389
A
HOH
114
4
HOH
HOH
390
A
HOH
115
4
HOH
HOH
391
A
HOH
116
4
HOH
HOH
392
A
HOH
117
4
HOH
HOH
393
A
HOH
118
4
HOH
HOH
394
A
HOH
119
4
HOH
HOH
395
A
HOH
120
4
HOH
HOH
396
A
HOH
121
4
HOH
HOH
397
A
HOH
122
4
HOH
HOH
398
A
HOH
123
4
HOH
HOH
399
A
HOH
124
4
HOH
HOH
400
A
HOH
125
4
HOH
HOH
401
A
HOH
126
4
HOH
HOH
402
A
HOH
127
4
HOH
HOH
403
A
HOH
128
4
HOH
HOH
404
A
HOH
129
4
HOH
HOH
405
A
HOH
130
4
HOH
HOH
406
A
HOH
131
4
HOH
HOH
407
A
HOH
132
4
HOH
HOH
408
A
HOH
133
4
HOH
HOH
409
A
HOH
134
4
HOH
HOH
410
A
HOH
135
4
HOH
HOH
411
A
HOH
136
4
HOH
HOH
412
A
HOH
137
4
HOH
HOH
413
A
HOH
138
4
HOH
HOH
414
A
HOH
139
4
HOH
HOH
415
A
HOH
140
4
HOH
HOH
416
A
HOH
141
4
HOH
HOH
417
A
HOH
142
4
HOH
HOH
418
A
HOH
143
4
HOH
HOH
419
A
HOH
144
4
HOH
HOH
420
A
HOH
145
4
HOH
HOH
421
A
HOH
146
4
HOH
HOH
422
A
HOH
147
4
HOH
HOH
423
A
HOH
149
4
HOH
HOH
424
A
HOH
150
4
HOH
HOH
425
A
HOH
151
4
HOH
HOH
426
A
HOH
152
4
HOH
HOH
427
A
HOH
154
4
HOH
HOH
428
A
HOH
155
4
HOH
HOH
429
A
HOH
156
4
HOH
HOH
430
A
HOH
157
4
HOH
HOH
431
A
HOH
158
4
HOH
HOH
432
A
HOH
159
4
HOH
HOH
433
A
HOH
160
4
HOH
HOH
434
A
HOH
161
4
HOH
HOH
435
A
HOH
162
4
HOH
HOH
436
A
HOH
163
4
HOH
HOH
437
A
HOH
164
4
HOH
HOH
438
A
HOH
165
4
HOH
HOH
439
A
HOH
166
4
HOH
HOH
440
A
HOH
167
4
HOH
HOH
441
A
HOH
168
4
HOH
HOH
442
A
HOH
169
4
HOH
HOH
443
A
HOH
170
4
HOH
HOH
444
A
HOH
171
4
HOH
HOH
445
A
HOH
172
4
HOH
HOH
446
A
HOH
173
4
HOH
HOH
447
A
HOH
174
4
HOH
HOH
448
A
HOH
175
4
HOH
HOH
449
A
HOH
176
4
HOH
HOH
450
A
HOH
177
4
HOH
HOH
451
A
HOH
178
4
HOH
HOH
452
A
HOH
179
4
HOH
HOH
453
A
HOH
180
4
HOH
HOH
454
A
HOH
181
4
HOH
HOH
455
A
HOH
182
4
HOH
HOH
456
A
HOH
183
4
HOH
HOH
457
A
HOH
184
4
HOH
HOH
458
A
HOH
185
4
HOH
HOH
459
A
HOH
186
4
HOH
HOH
460
A
HOH
187
4
HOH
HOH
461
A
HOH
188
4
HOH
HOH
462
A
HOH
189
4
HOH
HOH
463
A
HOH
190
4
HOH
HOH
464
A
HOH
191
4
HOH
HOH
465
A
HOH
192
4
HOH
HOH
466
A
HOH
193
4
HOH
HOH
467
A
HOH
194
4
HOH
HOH
468
A
HOH
196
4
HOH
HOH
469
A
HOH
199
4
HOH
HOH
470
A
HOH
200
4
HOH
HOH
471
A
HOH
201
4
HOH
HOH
472
A
HOH
202
4
HOH
HOH
473
A
HOH
203
4
HOH
HOH
474
A
HOH
204
4
HOH
HOH
475
A
G
1
n
1
DG
1
B
T
2
n
2
DT
2
B
C
3
n
3
DC
3
B
G
4
n
4
DG
4
B
T
5
n
5
DT
5
B
C
6
n
6
DC
6
B
A
7
n
1
DA
7
C
C
8
n
2
DC
8
C
G
9
n
3
DG
9
C
G
10
n
4
DG
10
C
G
11
n
5
DG
11
C
A
12
n
6
DA
12
C
C
13
n
7
DC
13
C
G
14
n
8
DG
14
C
A
15
n
9
DA
15
C
C
16
n
10
DC
16
C
MET
23
n
1
MET
23
A
THR
24
n
2
THR
24
A
TRP
25
n
3
TRP
25
A
LEU
26
n
4
LEU
26
A
SER
27
n
5
SER
27
A
ASP
28
n
6
ASP
28
A
PHE
29
n
7
PHE
29
A
PRO
30
n
8
PRO
30
A
GLN
31
n
9
GLN
31
A
ALA
32
n
10
ALA
32
A
TRP
33
n
11
TRP
33
A
ALA
34
n
12
ALA
34
A
GLU
35
n
13
GLU
35
A
THR
36
n
14
THR
36
A
GLY
37
n
15
GLY
37
A
GLY
38
n
16
GLY
38
A
MET
39
n
17
MET
39
A
GLY
40
n
18
GLY
40
A
LEU
41
n
19
LEU
41
A
ALA
42
n
20
ALA
42
A
VAL
43
n
21
VAL
43
A
ARG
44
n
22
ARG
44
A
GLN
45
n
23
GLN
45
A
ALA
46
n
24
ALA
46
A
PRO
47
n
25
PRO
47
A
LEU
48
n
26
LEU
48
A
ILE
49
n
27
ILE
49
A
ILE
50
n
28
ILE
50
A
PRO
51
n
29
PRO
51
A
LEU
52
n
30
LEU
52
A
LYS
53
n
31
LYS
53
A
ALA
54
n
32
ALA
54
A
THR
55
n
33
THR
55
A
SER
56
n
34
SER
56
A
THR
57
n
35
THR
57
A
PRO
58
n
36
PRO
58
A
VAL
59
n
37
VAL
59
A
SER
60
n
38
SER
60
A
ILE
61
n
39
ILE
61
A
LYS
62
n
40
LYS
62
A
GLN
63
n
41
GLN
63
A
TYR
64
n
42
TYR
64
A
PRO
65
n
43
PRO
65
A
MET
66
n
44
MET
66
A
SER
67
n
45
SER
67
A
GLN
68
n
46
GLN
68
A
GLU
69
n
47
GLU
69
A
ALA
70
n
48
ALA
70
A
ARG
71
n
49
ARG
71
A
LEU
72
n
50
LEU
72
A
GLY
73
n
51
GLY
73
A
ILE
74
n
52
ILE
74
A
LYS
75
n
53
LYS
75
A
PRO
76
n
54
PRO
76
A
HIS
77
n
55
HIS
77
A
ILE
78
n
56
ILE
78
A
GLN
79
n
57
GLN
79
A
ARG
80
n
58
ARG
80
A
LEU
81
n
59
LEU
81
A
LEU
82
n
60
LEU
82
A
ASP
83
n
61
ASP
83
A
GLN
84
n
62
GLN
84
A
GLY
85
n
63
GLY
85
A
ILE
86
n
64
ILE
86
A
LEU
87
n
65
LEU
87
A
VAL
88
n
66
VAL
88
A
PRO
89
n
67
PRO
89
A
CYS
90
n
68
CYS
90
A
GLN
91
n
69
GLN
91
A
SER
92
n
70
SER
92
A
PRO
93
n
71
PRO
93
A
TRP
94
n
72
TRP
94
A
ASN
95
n
73
ASN
95
A
THR
96
n
74
THR
96
A
PRO
97
n
75
PRO
97
A
LEU
98
n
76
LEU
98
A
LEU
99
n
77
LEU
99
A
PRO
100
n
78
PRO
100
A
VAL
101
n
79
VAL
101
A
LYS
102
n
80
LYS
102
A
LYS
103
n
81
LYS
103
A
PRO
104
n
82
PRO
104
A
GLY
105
n
83
GLY
105
A
THR
106
n
84
THR
106
A
ASN
107
n
85
ASN
107
A
ASP
108
n
86
ASP
108
A
TYR
109
n
87
TYR
109
A
ARG
110
n
88
ARG
110
A
PRO
111
n
89
PRO
111
A
VAL
112
n
90
VAL
112
A
GLN
113
n
91
GLN
113
A
ASP
114
n
92
ASP
114
A
LEU
115
n
93
LEU
115
A
ARG
116
n
94
ARG
116
A
GLU
117
n
95
GLU
117
A
VAL
118
n
96
VAL
118
A
ASN
119
n
97
ASN
119
A
LYS
120
n
98
LYS
120
A
ARG
121
n
99
ARG
121
A
VAL
122
n
100
VAL
122
A
GLU
123
n
101
GLU
123
A
ASP
124
n
102
ASP
124
A
ILE
125
n
103
ILE
125
A
HIS
126
n
104
HIS
126
A
PRO
127
n
105
PRO
127
A
THR
128
n
106
THR
128
A
VAL
129
n
107
VAL
129
A
PRO
130
n
108
PRO
130
A
ASN
131
n
109
ASN
131
A
PRO
132
n
110
PRO
132
A
TYR
133
n
111
TYR
133
A
ASN
134
n
112
ASN
134
A
LEU
135
n
113
LEU
135
A
LEU
136
n
114
LEU
136
A
SER
137
n
115
SER
137
A
GLY
138
n
116
GLY
138
A
LEU
139
n
117
LEU
139
A
PRO
140
n
118
PRO
140
A
PRO
141
n
119
PRO
141
A
SER
142
n
120
SER
142
A
HIS
143
n
121
HIS
143
A
GLN
144
n
122
GLN
144
A
TRP
145
n
123
TRP
145
A
TYR
146
n
124
TYR
146
A
THR
147
n
125
THR
147
A
VAL
148
n
126
VAL
148
A
LEU
149
n
127
LEU
149
A
ASP
150
n
128
ASP
150
A
LEU
151
n
129
LEU
151
A
LYS
152
n
130
LYS
152
A
ASP
153
n
131
ASP
153
A
ALA
154
n
132
ALA
154
A
PHE
155
n
133
PHE
155
A
PHE
156
n
134
PHE
156
A
CYS
157
n
135
CYS
157
A
LEU
158
n
136
LEU
158
A
ARG
159
n
137
ARG
159
A
LEU
160
n
138
LEU
160
A
HIS
161
n
139
HIS
161
A
PRO
162
n
140
PRO
162
A
THR
163
n
141
THR
163
A
SER
164
n
142
SER
164
A
GLN
165
n
143
GLN
165
A
PRO
166
n
144
PRO
166
A
LEU
167
n
145
LEU
167
A
PHE
168
n
146
PHE
168
A
ALA
169
n
147
ALA
169
A
PHE
170
n
148
PHE
170
A
GLU
171
n
149
GLU
171
A
TRP
172
n
150
TRP
172
A
ARG
173
n
151
ARG
173
A
ASP
174
n
152
ASP
174
A
PRO
175
n
153
PRO
175
A
GLU
176
n
154
GLU
176
A
MET
177
n
155
MET
177
A
GLY
178
n
156
GLY
178
A
ILE
179
n
157
ILE
179
A
SER
180
n
158
SER
180
A
GLY
181
n
159
GLY
181
A
GLN
182
n
160
GLN
182
A
LEU
183
n
161
LEU
183
A
THR
184
n
162
THR
184
A
TRP
185
n
163
TRP
185
A
THR
186
n
164
THR
186
A
ARG
187
n
165
ARG
187
A
LEU
188
n
166
LEU
188
A
PRO
189
n
167
PRO
189
A
GLN
190
n
168
GLN
190
A
GLY
191
n
169
GLY
191
A
PHE
192
n
170
PHE
192
A
LYS
193
n
171
LYS
193
A
ASN
194
n
172
ASN
194
A
SER
195
n
173
SER
195
A
PRO
196
n
174
PRO
196
A
THR
197
n
175
THR
197
A
LEU
198
n
176
LEU
198
A
PHE
199
n
177
PHE
199
A
ASP
200
n
178
ASP
200
A
GLU
201
n
179
GLU
201
A
ALA
202
n
180
ALA
202
A
LEU
203
n
181
LEU
203
A
HIS
204
n
182
HIS
204
A
ARG
205
n
183
ARG
205
A
ASP
206
n
184
ASP
206
A
LEU
207
n
185
LEU
207
A
ALA
208
n
186
ALA
208
A
ASP
209
n
187
ASP
209
A
PHE
210
n
188
PHE
210
A
ARG
211
n
189
ARG
211
A
ILE
212
n
190
ILE
212
A
GLN
213
n
191
GLN
213
A
HIS
214
n
192
HIS
214
A
PRO
215
n
193
PRO
215
A
ASP
216
n
194
ASP
216
A
LEU
217
n
195
LEU
217
A
ILE
218
n
196
ILE
218
A
LEU
219
n
197
LEU
219
A
LEU
220
n
198
LEU
220
A
GLN
221
n
199
GLN
221
A
TYR
222
n
200
TYR
222
A
VAL
223
n
201
VAL
223
A
ASP
224
n
202
ASP
224
A
ASP
225
n
203
ASP
225
A
LEU
226
n
204
LEU
226
A
LEU
227
n
205
LEU
227
A
LEU
228
n
206
LEU
228
A
ALA
229
n
207
ALA
229
A
ALA
230
n
208
ALA
230
A
THR
231
n
209
THR
231
A
SER
232
n
210
SER
232
A
GLU
233
n
211
GLU
233
A
LEU
234
n
212
LEU
234
A
ASP
235
n
213
ASP
235
A
CYS
236
n
214
CYS
236
A
GLN
237
n
215
GLN
237
A
GLN
238
n
216
GLN
238
A
GLY
239
n
217
GLY
239
A
THR
240
n
218
THR
240
A
ARG
241
n
219
ARG
241
A
ALA
242
n
220
ALA
242
A
LEU
243
n
221
LEU
243
A
LEU
244
n
222
LEU
244
A
GLN
245
n
223
GLN
245
A
THR
246
n
224
THR
246
A
LEU
247
n
225
LEU
247
A
GLY
248
n
226
GLY
248
A
ASN
249
n
227
ASN
249
A
LEU
250
n
228
LEU
250
A
GLY
251
n
229
GLY
251
A
TYR
252
n
230
TYR
252
A
ARG
253
n
231
ARG
253
A
ALA
254
n
232
ALA
254
A
SER
255
n
233
SER
255
A
ALA
256
n
234
ALA
256
A
LYS
257
n
235
LYS
257
A
LYS
258
n
236
LYS
258
A
ALA
259
n
237
ALA
259
A
GLN
260
n
238
GLN
260
A
ILE
261
n
239
ILE
261
A
CYS
262
n
240
CYS
262
A
GLN
263
n
241
GLN
263
A
LYS
264
n
242
LYS
264
A
GLN
265
n
243
GLN
265
A
VAL
266
n
244
VAL
266
A
LYS
267
n
245
LYS
267
A
TYR
268
n
246
TYR
268
A
LEU
269
n
247
LEU
269
A
GLY
270
n
248
GLY
270
A
TYR
271
n
249
TYR
271
A
LEU
272
n
250
LEU
272
A
LEU
273
n
251
LEU
273
A
LYS
274
n
252
LYS
274
A
GLU
275
n
253
GLU
275
A
GLY
276
n
254
GLY
276
A
GLN
277
n
255
GLN
277
A
ARG
278
n
256
ARG
278
A
author_defined_assembly
3
trimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
CYS
90
C
N
CYS
68
A
O
GLN
182
C
O
GLN
160
A
N
LEU
183
C
N
LEU
161
A
O
PHE
170
C
O
PHE
148
A
N
VAL
101
C
N
VAL
79
A
O
ARG
110
C
O
ARG
88
A
O
TYR
222
C
O
TYR
200
A
N
ASP
225
C
N
ASP
203
A
N
ALA
230
C
N
ALA
208
A
O
TRP
145
C
O
TRP
123
A
N
VAL
148
C
N
VAL
126
A
O
GLN
260
C
O
GLN
238
A
N
TYR
268
C
N
TYR
246
A
O
TYR
271
C
O
TYR
249
1
A
LEU
41
-171.23
117.63
1
A
PRO
104
21.81
39.76
1
A
ASN
107
-90.57
50.87
1
A
MET
177
52.27
89.73
1
A
VAL
223
55.89
-108.17
44.0
0.2520000
0.2250000
2.00
50.00
1204
25995
24781
95.5
RANDOM
1
Isotropic
THROUGHOUT
0.0
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1D1U
Engh & Huber
0.28
0.20
2.00
50.00
204
2577
0
324
2049
0.005
1.26
22.8
1.0
41.3
2.0
50
1I6J
25995
24781
0.0
0.0
0.0280000
1
28.2
1.1
95.3
0.2980000
2.00
2.07
3.4
2163
2.1
85.4
phasing
AMoRE
refinement
CNS
1.0
data reduction
DENZO
data scaling
SCALEPACK
CRYSTAL STRUCTURE OF A PSEUDO-16-MER DNA WITH STACKED GUANINES AND TWO G-A MISPAIRS COMPLEXED WITH THE N-TERMINAL FRAGMENT OF MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
The second part of the DNA is generated by the 2-fold: -x-1, -y, z
The second part of the DNA is generated by the 2-fold: -x-1, -y, z
A
MET
23
C
MET
1
HELX_P
A
PHE
29
C
PHE
7
1
1
7
A
TRP
33
C
TRP
11
HELX_P
A
GLY
38
C
GLY
16
1
2
6
A
SER
67
C
SER
45
HELX_P
A
GLN
84
C
GLN
62
1
3
18
A
PRO
104
C
PRO
82
HELX_P
A
THR
106
C
THR
84
5
4
3
A
LEU
115
C
LEU
93
HELX_P
A
LYS
120
C
LYS
98
1
5
6
A
ASN
131
C
ASN
109
HELX_P
A
SER
137
C
SER
115
1
6
7
A
ALA
154
C
ALA
132
HELX_P
A
LEU
158
C
LEU
136
5
7
5
A
SER
164
C
SER
142
HELX_P
A
ALA
169
C
ALA
147
5
8
6
A
ASN
194
C
ASN
172
HELX_P
A
LEU
207
C
LEU
185
1
9
14
A
LEU
207
C
LEU
185
HELX_P
A
HIS
214
C
HIS
192
1
10
8
A
SER
232
C
SER
210
HELX_P
A
GLY
251
C
GLY
229
1
11
20
hydrog
WATSON-CRICK
B
DG
1
A
N1
DG
1
1_555
C
DC
16
B
N3
DC
10
1_555
hydrog
WATSON-CRICK
B
DG
1
A
N2
DG
1
1_555
C
DC
16
B
O2
DC
10
1_555
hydrog
WATSON-CRICK
B
DG
1
A
O6
DG
1
1_555
C
DC
16
B
N4
DC
10
1_555
hydrog
WATSON-CRICK
B
DT
2
A
N3
DT
2
1_555
C
DA
15
B
N1
DA
9
1_555
hydrog
WATSON-CRICK
B
DT
2
A
O4
DT
2
1_555
C
DA
15
B
N6
DA
9
1_555
hydrog
WATSON-CRICK
B
DC
3
A
N3
DC
3
1_555
C
DG
14
B
N1
DG
8
1_555
hydrog
WATSON-CRICK
B
DC
3
A
N4
DC
3
1_555
C
DG
14
B
O6
DG
8
1_555
hydrog
WATSON-CRICK
B
DC
3
A
O2
DC
3
1_555
C
DG
14
B
N2
DG
8
1_555
hydrog
WATSON-CRICK
B
DG
4
A
N1
DG
4
1_555
C
DC
13
B
N3
DC
7
1_555
hydrog
WATSON-CRICK
B
DG
4
A
N2
DG
4
1_555
C
DC
13
B
O2
DC
7
1_555
hydrog
WATSON-CRICK
B
DG
4
A
O6
DG
4
1_555
C
DC
13
B
N4
DC
7
1_555
hydrog
WATSON-CRICK
B
DT
5
A
N3
DT
5
1_555
C
DA
12
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
B
DT
5
A
O4
DT
5
1_555
C
DA
12
B
N6
DA
6
1_555
TRANSFERASE/DNA
Moloney Murine Leukemia Virus, Reverse Transcriptase, G-A Mispair, TRANSFERASE-DNA COMPLEX
POL_MLVMO
UNP
3
144
P03355
TWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKK
PGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQL
TWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKAQICQ
KQVKYLGYLLKEGQR
1I6J
PDB
1
1I6J
1I6J
PDB
2
1I6J
144
398
1I6J
24
278
P03355
A
1
2
256
1
6
1I6J
1
6
1I6J
B
2
1
6
7
16
1I6J
7
16
1I6J
C
3
1
10
1
initiating methionine
MET
23
1I6J
A
P03355
UNP
1
3
2
4
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
87
C
LEU
65
A
CYS
90
C
CYS
68
A
GLN
182
C
GLN
160
A
TRP
185
C
TRP
163
A
PHE
170
C
PHE
148
A
GLU
171
C
GLU
149
A
LEU
98
C
LEU
76
A
LYS
102
C
LYS
80
A
TYR
109
C
TYR
87
A
GLN
113
C
GLN
91
A
ILE
218
C
ILE
196
A
TYR
222
C
TYR
200
A
ASP
225
C
ASP
203
A
ALA
230
C
ALA
208
A
TRP
145
C
TRP
123
A
ASP
150
C
ASP
128
A
GLN
260
C
GLN
238
A
GLN
263
C
GLN
241
A
GLN
265
C
GLN
243
A
TYR
268
C
TYR
246
A
TYR
271
C
TYR
249
A
LYS
274
C
LYS
252
18
P 21 21 2