1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Vranken, W.F.
James, S.
Bennett, H.P.J.
Ni, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proteins
PSFGEY
0867
0887-3585
47
14
24
10.1002/prot.10077.abs
11870861
Solution structures of a 30-residue amino-terminal domain of the carp granulin-1 protein and its amino-terminally truncated 3-30 subfragment: implications for the conformational stability of the stack of two beta-hairpins.
2002
10.2210/pdb1i8x/pdb
pdb_00001i8x
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
3195.601
GRANULIN-1
N-TERMINUS (RESIDUES 1-30)
C17S, C27S
1
syn
polymer
no
no
VIHCDAATICPDGTTCSLSPYGVWYCSPFS
VIHCDAATICPDGTTCSLSPYGVWYCSPFS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2002-04-17
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-10-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
1qgm is the Same molecule with a different
structure calculation method
4351 is NMR data for molecule
RCSB
Y
RCSB
2001-03-16
REL
REL
THE PEPTIDE WAS CHEMICALLY SYNTHESIZED by SOlid phase synthesis. The SEQUENCE OF THE PEPTIDE IS NATURALLY FOUND IN CYPRINUS CARPIO (CARP).
sample
structures with the lowest energy
30
10
2D NOESY
DQF-COSY
2D NOESY
0.02
4.5
1
atm
288
K
No NOE peaks were manually assigned - calculation
is based on initial NOE peak lists and chemical
shift assignments combined with ambiguous restraints
used in ARIA.
Semi-automated calculation based on a set of ARIA runs.
1
lowest energy
Acetate buffer
90% H2O/10% D2O
Acetate buffer
100% D2O
Bruker
processing
XwinNMR
2.1
Linge
refinement
ARIA
1.0
500
Bruker
AVANCE
800
Bruker
AVANCE
VAL
1
n
1
VAL
1
A
ILE
2
n
2
ILE
2
A
HIS
3
n
3
HIS
3
A
CYS
4
n
4
CYS
4
A
ASP
5
n
5
ASP
5
A
ALA
6
n
6
ALA
6
A
ALA
7
n
7
ALA
7
A
THR
8
n
8
THR
8
A
ILE
9
n
9
ILE
9
A
CYS
10
n
10
CYS
10
A
PRO
11
n
11
PRO
11
A
ASP
12
n
12
ASP
12
A
GLY
13
n
13
GLY
13
A
THR
14
n
14
THR
14
A
THR
15
n
15
THR
15
A
CYS
16
n
16
CYS
16
A
SER
17
n
17
SER
17
A
LEU
18
n
18
LEU
18
A
SER
19
n
19
SER
19
A
PRO
20
n
20
PRO
20
A
TYR
21
n
21
TYR
21
A
GLY
22
n
22
GLY
22
A
VAL
23
n
23
VAL
23
A
TRP
24
n
24
TRP
24
A
TYR
25
n
25
TYR
25
A
CYS
26
n
26
CYS
26
A
SER
27
n
27
SER
27
A
PRO
28
n
28
PRO
28
A
PHE
29
n
29
PHE
29
A
SER
30
n
30
SER
30
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
17
A
O
SER
17
A
N
TYR
25
A
N
TYR
25
1
A
CYS
4
58.81
-90.13
1
A
ASP
12
-59.52
104.13
2
A
ALA
7
-124.03
-51.76
2
A
PRO
20
-59.31
-8.06
3
A
PRO
20
-58.36
-4.80
4
A
ALA
6
58.40
15.76
4
A
THR
8
53.37
86.75
4
A
ASP
12
-59.65
104.27
5
A
HIS
3
-133.90
-33.60
5
A
CYS
4
55.51
-94.05
5
A
ASP
5
-94.37
30.71
5
A
THR
8
55.64
87.29
6
A
HIS
3
-137.25
-64.21
6
A
CYS
4
60.93
-86.40
6
A
PRO
20
-59.45
-6.43
7
A
ASP
5
59.98
18.19
7
A
PRO
20
-56.62
-8.36
8
A
CYS
4
58.80
-90.84
8
A
ALA
6
58.23
16.76
8
A
ASP
12
-55.43
99.96
9
A
CYS
4
63.54
-84.35
9
A
ALA
7
-137.27
-31.46
9
A
ASP
12
69.65
138.14
10
A
CYS
4
60.94
-87.10
SEMI-AUTOMATIC STRUCTURE DETERMINATION OF THE CG1 1-30 PEPTIDE BASED ON ARIA
1
N
N
disulf
2.031
A
CYS
4
A
SG
CYS
4
1_555
A
CYS
16
A
SG
CYS
16
1_555
disulf
2.029
A
CYS
10
A
SG
CYS
10
1_555
A
CYS
26
A
SG
CYS
26
1_555
CYTOKINE
Two beta-hairpin stack, CYTOKINE
GRN1_CYPCA
UNP
1
1
P81013
VIHCDAATICPDGTTCCLSPYGVWYCCPFS
1
30
1I8X
1
30
P81013
A
1
1
30
1
CYS
engineered mutation
SER
17
1I8X
A
P81013
UNP
17
17
1
CYS
engineered mutation
SER
27
1I8X
A
P81013
UNP
27
27
2
anti-parallel
A
THR
14
A
THR
14
A
LEU
18
A
LEU
18
A
TRP
24
A
TRP
24
A
PRO
28
A
PRO
28