1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Vranken, W.F.
James, S.
Bennett, H.P.J.
Ni, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proteins
PSFGEY
0867
0887-3585
47
14
24
10.1002/prot.10077.abs
11870861
Solution structures of a 30-residue amino-terminal domain of the carp granulin-1 protein and its amino-terminally truncated 3-30 subfragment: implications for the conformational stability of the stack of two beta-hairpins.
2002
10.2210/pdb1i8y/pdb
pdb_00001i8y
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
2983.312
GRANULIN-1
N-TERMINUS (RESIDUES 3-30)
C15S, C25S
1
syn
polymer
no
no
HCDAATICPDGTTCSLSPYGVWYCSPFS
HCDAATICPDGTTCSLSPYGVWYCSPFS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2002-04-17
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-10-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
1qgm is CG1-30 molecule
1i8x is CG1-30 molecule
4871 is NMR data for this molecule
RCSB
Y
RCSB
2001-03-16
REL
REL
THE PEPTIDE WAS CHEMICALLY SYNTHESIZED by SOlid phase synthesis. The SEQUENCE OF THE PEPTIDE IS NATURALLY FOUND IN CYPRINUS CARPIO (CARP).
sample
structures with the lowest energy
30
10
2D NOESY
2D NOESY
0.02
5.0
1
atm
288
K
No NOE peaks were manually assigned - calculation is based on initial NOE peak lists and chemical shift assignments combined with ambiguous restraints used in ARIA.
Semi-automated calculation based on a set of ARIA runs.
1
lowest energy
Acetate buffer
90% H2O/10% D2O
Acetate buffer
100% D2O
Bruker
processing
XwinNMR
2.1
Linge
refinement
ARIA
1.0
Johnson, B.
data analysis
NMRView
3.0
500
Bruker
AVANCE
800
Bruker
AVANCE
HIS
1
n
1
HIS
1
A
CYS
2
n
2
CYS
2
A
ASP
3
n
3
ASP
3
A
ALA
4
n
4
ALA
4
A
ALA
5
n
5
ALA
5
A
THR
6
n
6
THR
6
A
ILE
7
n
7
ILE
7
A
CYS
8
n
8
CYS
8
A
PRO
9
n
9
PRO
9
A
ASP
10
n
10
ASP
10
A
GLY
11
n
11
GLY
11
A
THR
12
n
12
THR
12
A
THR
13
n
13
THR
13
A
CYS
14
n
14
CYS
14
A
SER
15
n
15
SER
15
A
LEU
16
n
16
LEU
16
A
SER
17
n
17
SER
17
A
PRO
18
n
18
PRO
18
A
TYR
19
n
19
TYR
19
A
GLY
20
n
20
GLY
20
A
VAL
21
n
21
VAL
21
A
TRP
22
n
22
TRP
22
A
TYR
23
n
23
TYR
23
A
CYS
24
n
24
CYS
24
A
SER
25
n
25
SER
25
A
PRO
26
n
26
PRO
26
A
PHE
27
n
27
PHE
27
A
SER
28
n
28
SER
28
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
15
A
N
SER
15
A
O
TYR
23
A
O
TYR
23
1
A
CYS
2
-103.11
57.46
1
A
ALA
5
-148.34
12.65
1
A
THR
6
-143.80
-50.79
1
A
ILE
7
54.28
80.31
1
A
PRO
9
-48.68
162.20
1
A
PRO
26
-78.75
20.41
1
A
PHE
27
-140.41
35.82
2
A
ASP
3
-160.67
114.64
2
A
ALA
5
-164.87
-49.86
2
A
ILE
7
64.58
107.06
3
A
CYS
2
-117.37
-162.04
3
A
ALA
4
-161.16
-19.90
3
A
ALA
5
-152.58
-38.11
3
A
THR
6
-94.38
-63.94
3
A
ILE
7
64.78
124.30
3
A
ASP
10
61.88
-170.01
4
A
ALA
4
54.40
-151.39
4
A
THR
6
-130.00
-72.59
4
A
ILE
7
49.22
73.47
4
A
PRO
9
-44.98
152.78
5
A
CYS
2
-57.25
108.32
5
A
ALA
5
-153.12
-26.61
5
A
ILE
7
60.67
91.37
5
A
PHE
27
61.44
-179.06
6
A
CYS
2
-156.49
4.85
6
A
ALA
4
-105.44
-71.56
6
A
ALA
5
-135.60
-57.73
6
A
THR
6
42.43
-159.04
6
A
ILE
7
-141.07
43.82
6
A
PRO
9
-52.19
170.83
6
A
PRO
26
-80.33
31.96
6
A
PHE
27
-161.02
40.88
7
A
CYS
2
-52.37
101.37
7
A
ALA
4
50.66
-98.99
7
A
ALA
5
-113.55
50.61
7
A
ILE
7
35.08
87.25
8
A
CYS
2
-51.61
104.39
8
A
THR
6
-137.03
-78.04
8
A
CYS
8
59.98
165.78
8
A
PRO
9
-49.77
-72.20
8
A
TYR
19
-75.45
-81.88
9
A
CYS
2
-154.91
-157.55
9
A
ALA
4
-156.87
-57.97
9
A
ALA
5
-164.18
115.33
9
A
THR
6
-162.29
-39.60
9
A
ASP
10
54.47
-162.79
10
A
CYS
2
-48.20
96.39
10
A
THR
6
-136.68
-95.66
10
A
ILE
7
58.34
108.05
10
A
ASP
10
55.50
-166.75
SEMI-AUTOMATIC STRUCTURE DETERMINATION OF THE CG1 3-30 PEPTIDE BASED ON ARIA
1
N
N
disulf
2.030
A
CYS
2
A
SG
CYS
2
1_555
A
CYS
14
A
SG
CYS
14
1_555
disulf
2.032
A
CYS
8
A
SG
CYS
8
1_555
A
CYS
24
A
SG
CYS
24
1_555
CYTOKINE
Beta-hairpin stack, CYTOKINE
GRN1_CYPCA
UNP
1
3
P81013
HCDAATICPDGTTCCLSPYGVWYCCPFS
3
30
1I8Y
1
28
P81013
A
1
1
28
1
CYS
engineered mutation
SER
15
1I8Y
A
P81013
UNP
17
15
1
CYS
engineered mutation
SER
25
1I8Y
A
P81013
UNP
27
25
2
anti-parallel
A
THR
13
A
THR
13
A
LEU
16
A
LEU
16
A
TRP
22
A
TRP
22
A
SER
25
A
SER
25