0.009571 0.000000 0.000000 0.000000 0.011543 0.000000 0.000000 0.000000 0.026882 0.000000 0.000000 0.000000 Cho, S.W. Lee, S. Shin, W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 104.480 86.630 37.200 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H12 O6 180.156 alpha-D-mannopyranose D-saccharide, alpha linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 311 863 878 10.1006/jmbi.2001.4919 11518536 The X-ray structure of Aspergillus aculeatus polygalacturonase and a modeled structure of the polygalacturonase-octagalacturonate complex. 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 288 1 COLLIMATOR AREA DETECTOR 1999-10-21 ENRAF-NONIUS FAST GRAPHITE SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 1.5418 ROTATING ANODE RIGAKU RU200H 34675.590 POLYGALACTURONASE 3.2.1.15 1 nat polymer 586.542 alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 180.156 alpha-D-mannopyranose 10 man non-polymer 18.015 water 193 nat water no no ATTCTFSGSNGASSASKSKTSCSTIVLSNVAVPSGTTLDLTKLNDGTHVIFSGETTFGYKEWSGPLISVSGSDLTITGAS GHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDA FDIGTSTYVTISGATVYNQDDCVAVNSGENIYFSGGYCSGGHGLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNI DTTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTTGVPITDFVLDNVHGSVVSSGTNILISCGSGSCSDWTWTDVS VSGGKTSSKCTNVPSGASC ATTCTFSGSNGASSASKSKTSCSTIVLSNVAVPSGTTLDLTKLNDGTHVIFSGETTFGYKEWSGPLISVSGSDLTITGAS GHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDA FDIGTSTYVTISGATVYNQDDCVAVNSGENIYFSGGYCSGGHGLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNI DTTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTTGVPITDFVLDNVHGSVVSSGTNILISCGSGSCSDWTWTDVS VSGGKTSSKCTNVPSGASC A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Aspergillus sample 5053 Aspergillus aculeatus 1 1 49.32 VAPOR DIFFUSION, HANGING DROP 8.5 45% 1,6-HEXANEDIOL, 0.1M TRIS-HCL , 0.2M AMMONIUM ACETATE, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K 288 software atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen struct_asym struct_conn struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Version format compliance Non-polymer description Version format compliance Refinement description Atomic model Data collection Derived calculations Structure summary 1 0 2001-09-19 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 2 0 2020-07-29 _software.name _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.type_symbol _chem_comp.name _chem_comp.type _entity.formula_weight _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.type _pdbx_struct_assembly_gen.asym_id_list _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id NAG 351 n B NAG 1 NAG 352 n B NAG 2 MAN 353 n B MAN 3 DManpa a-D-mannopyranose a-D-Manp Man DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc 1BHE contains the same protein FROM ERWINIA CAROTOVORA SSP.CAROTOVORA 1CZF contains Endo-Polygalacturonase II From Aspergillus Niger 1RMG contains RHAMNOGALACTURONASE A 1IB4 contains the same protein at PH4.5 RCSB Y PDBJ 2001-03-22 REL REL oligosaccharide DManpa1-4DGlcpNAcb1-4DGlcpNAcb1- 2 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5]/1-1-2/a4-b1_b4-c1 2 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}}} 2 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 2 O1 HO4 sing C1 O4 MAN NAG 3 2 2 O1 HO4 sing n n n MAN alpha-D-mannopyranose HOH water MAN 405 3 MAN MAN 405 A MAN 407 3 MAN MAN 407 A MAN 409 3 MAN MAN 409 A MAN 413 3 MAN MAN 413 A MAN 414 3 MAN MAN 414 A MAN 416 3 MAN MAN 416 A MAN 418 3 MAN MAN 418 A MAN 423 3 MAN MAN 423 A MAN 424 3 MAN MAN 424 A MAN 434 3 MAN MAN 434 A HOH 501 4 HOH HOH 501 A HOH 502 4 HOH HOH 502 A HOH 503 4 HOH HOH 503 A HOH 504 4 HOH HOH 504 A HOH 505 4 HOH HOH 505 A HOH 506 4 HOH HOH 506 A HOH 507 4 HOH HOH 507 A HOH 508 4 HOH HOH 508 A HOH 509 4 HOH HOH 509 A HOH 510 4 HOH HOH 510 A HOH 511 4 HOH HOH 511 A HOH 512 4 HOH HOH 512 A HOH 513 4 HOH HOH 513 A HOH 514 4 HOH HOH 514 A HOH 515 4 HOH HOH 515 A HOH 516 4 HOH HOH 516 A HOH 517 4 HOH HOH 517 A HOH 518 4 HOH HOH 518 A HOH 519 4 HOH HOH 519 A HOH 520 4 HOH HOH 520 A HOH 521 4 HOH HOH 521 A HOH 522 4 HOH HOH 522 A HOH 523 4 HOH HOH 523 A HOH 524 4 HOH HOH 524 A HOH 525 4 HOH HOH 525 A HOH 526 4 HOH HOH 526 A HOH 527 4 HOH HOH 527 A HOH 528 4 HOH HOH 528 A HOH 529 4 HOH HOH 529 A HOH 530 4 HOH HOH 530 A HOH 531 4 HOH HOH 531 A HOH 532 4 HOH HOH 532 A HOH 533 4 HOH HOH 533 A HOH 534 4 HOH HOH 534 A HOH 535 4 HOH HOH 535 A HOH 536 4 HOH HOH 536 A HOH 537 4 HOH HOH 537 A HOH 538 4 HOH HOH 538 A HOH 539 4 HOH HOH 539 A HOH 540 4 HOH HOH 540 A HOH 541 4 HOH HOH 541 A HOH 542 4 HOH HOH 542 A HOH 543 4 HOH HOH 543 A HOH 544 4 HOH HOH 544 A HOH 545 4 HOH HOH 545 A HOH 546 4 HOH HOH 546 A HOH 547 4 HOH HOH 547 A HOH 548 4 HOH HOH 548 A HOH 549 4 HOH HOH 549 A HOH 550 4 HOH HOH 550 A HOH 551 4 HOH HOH 551 A HOH 552 4 HOH HOH 552 A HOH 553 4 HOH HOH 553 A HOH 554 4 HOH HOH 554 A HOH 555 4 HOH HOH 555 A HOH 556 4 HOH HOH 556 A HOH 557 4 HOH HOH 557 A HOH 558 4 HOH HOH 558 A HOH 559 4 HOH HOH 559 A HOH 560 4 HOH HOH 560 A HOH 561 4 HOH HOH 561 A HOH 562 4 HOH HOH 562 A HOH 563 4 HOH HOH 563 A HOH 564 4 HOH HOH 564 A HOH 565 4 HOH HOH 565 A HOH 566 4 HOH HOH 566 A HOH 567 4 HOH HOH 567 A HOH 568 4 HOH HOH 568 A HOH 569 4 HOH HOH 569 A HOH 570 4 HOH HOH 570 A HOH 571 4 HOH HOH 571 A HOH 572 4 HOH HOH 572 A HOH 573 4 HOH HOH 573 A HOH 574 4 HOH HOH 574 A HOH 575 4 HOH HOH 575 A HOH 576 4 HOH HOH 576 A HOH 577 4 HOH HOH 577 A HOH 578 4 HOH HOH 578 A HOH 579 4 HOH HOH 579 A HOH 580 4 HOH HOH 580 A HOH 581 4 HOH HOH 581 A HOH 582 4 HOH HOH 582 A HOH 583 4 HOH HOH 583 A HOH 584 4 HOH HOH 584 A HOH 585 4 HOH HOH 585 A HOH 586 4 HOH HOH 586 A HOH 587 4 HOH HOH 587 A HOH 588 4 HOH HOH 588 A HOH 589 4 HOH HOH 589 A HOH 590 4 HOH HOH 590 A HOH 591 4 HOH HOH 591 A HOH 592 4 HOH HOH 592 A HOH 593 4 HOH HOH 593 A HOH 594 4 HOH HOH 594 A HOH 595 4 HOH HOH 595 A HOH 596 4 HOH HOH 596 A HOH 597 4 HOH HOH 597 A HOH 598 4 HOH HOH 598 A HOH 599 4 HOH HOH 599 A HOH 600 4 HOH HOH 600 A HOH 601 4 HOH HOH 601 A HOH 602 4 HOH HOH 602 A HOH 603 4 HOH HOH 603 A HOH 604 4 HOH HOH 604 A HOH 605 4 HOH HOH 605 A HOH 606 4 HOH HOH 606 A HOH 607 4 HOH HOH 607 A HOH 608 4 HOH HOH 608 A HOH 609 4 HOH HOH 609 A HOH 610 4 HOH HOH 610 A HOH 611 4 HOH HOH 611 A HOH 612 4 HOH HOH 612 A HOH 613 4 HOH HOH 613 A HOH 614 4 HOH HOH 614 A HOH 615 4 HOH HOH 615 A HOH 616 4 HOH HOH 616 A HOH 617 4 HOH HOH 617 A HOH 618 4 HOH HOH 618 A HOH 619 4 HOH HOH 619 A HOH 620 4 HOH HOH 620 A HOH 621 4 HOH HOH 621 A HOH 622 4 HOH HOH 622 A HOH 623 4 HOH HOH 623 A HOH 624 4 HOH HOH 624 A HOH 625 4 HOH HOH 625 A HOH 626 4 HOH HOH 626 A HOH 627 4 HOH HOH 627 A HOH 628 4 HOH HOH 628 A HOH 629 4 HOH HOH 629 A HOH 630 4 HOH HOH 630 A HOH 631 4 HOH HOH 631 A HOH 632 4 HOH HOH 632 A HOH 633 4 HOH HOH 633 A HOH 634 4 HOH HOH 634 A HOH 635 4 HOH HOH 635 A HOH 636 4 HOH HOH 636 A HOH 637 4 HOH HOH 637 A HOH 638 4 HOH HOH 638 A HOH 639 4 HOH HOH 639 A HOH 640 4 HOH HOH 640 A HOH 641 4 HOH HOH 641 A HOH 642 4 HOH HOH 642 A HOH 643 4 HOH HOH 643 A HOH 644 4 HOH HOH 644 A HOH 645 4 HOH HOH 645 A HOH 646 4 HOH HOH 646 A HOH 647 4 HOH HOH 647 A HOH 648 4 HOH HOH 648 A HOH 649 4 HOH HOH 649 A HOH 650 4 HOH HOH 650 A HOH 651 4 HOH HOH 651 A HOH 652 4 HOH HOH 652 A HOH 653 4 HOH HOH 653 A HOH 654 4 HOH HOH 654 A HOH 655 4 HOH HOH 655 A HOH 656 4 HOH HOH 656 A HOH 657 4 HOH HOH 657 A HOH 658 4 HOH HOH 658 A HOH 659 4 HOH HOH 659 A HOH 660 4 HOH HOH 660 A HOH 661 4 HOH HOH 661 A HOH 662 4 HOH HOH 662 A HOH 663 4 HOH HOH 663 A HOH 664 4 HOH HOH 664 A HOH 665 4 HOH HOH 665 A HOH 666 4 HOH HOH 666 A HOH 667 4 HOH HOH 667 A HOH 668 4 HOH HOH 668 A HOH 669 4 HOH HOH 669 A HOH 670 4 HOH HOH 670 A HOH 671 4 HOH HOH 671 A HOH 672 4 HOH HOH 672 A HOH 673 4 HOH HOH 673 A HOH 674 4 HOH HOH 674 A HOH 675 4 HOH HOH 675 A HOH 676 4 HOH HOH 676 A HOH 677 4 HOH HOH 677 A HOH 678 4 HOH HOH 678 A HOH 679 4 HOH HOH 679 A HOH 680 4 HOH HOH 680 A HOH 681 4 HOH HOH 681 A HOH 682 4 HOH HOH 682 A HOH 683 4 HOH HOH 683 A HOH 684 4 HOH HOH 684 A HOH 685 4 HOH HOH 685 A HOH 686 4 HOH HOH 686 A HOH 687 4 HOH HOH 687 A HOH 688 4 HOH HOH 688 A HOH 689 4 HOH HOH 689 A HOH 690 4 HOH HOH 690 A HOH 691 4 HOH HOH 691 A HOH 692 4 HOH HOH 692 A HOH 693 4 HOH HOH 693 A ALA 1 n 1 ALA 1 A THR 2 n 2 THR 2 A THR 3 n 3 THR 3 A CYS 4 n 4 CYS 4 A THR 5 n 5 THR 5 A PHE 6 n 6 PHE 6 A SER 7 n 7 SER 7 A GLY 8 n 8 GLY 8 A SER 9 n 9 SER 9 A ASN 10 n 10 ASN 10 A GLY 11 n 11 GLY 11 A ALA 12 n 12 ALA 12 A SER 13 n 13 SER 13 A SER 14 n 14 SER 14 A ALA 15 n 15 ALA 15 A SER 16 n 16 SER 16 A LYS 17 n 17 LYS 17 A SER 18 n 18 SER 18 A LYS 19 n 19 LYS 19 A THR 20 n 20 THR 20 A SER 21 n 21 SER 21 A CYS 22 n 22 CYS 22 A SER 23 n 23 SER 23 A THR 24 n 24 THR 24 A ILE 25 n 25 ILE 25 A VAL 26 n 26 VAL 26 A LEU 27 n 27 LEU 27 A SER 28 n 28 SER 28 A ASN 29 n 29 ASN 29 A VAL 30 n 30 VAL 30 A ALA 31 n 31 ALA 31 A VAL 32 n 32 VAL 32 A PRO 33 n 33 PRO 33 A SER 34 n 34 SER 34 A GLY 35 n 35 GLY 35 A THR 36 n 36 THR 36 A THR 37 n 37 THR 37 A LEU 38 n 38 LEU 38 A ASP 39 n 39 ASP 39 A LEU 40 n 40 LEU 40 A THR 41 n 41 THR 41 A LYS 42 n 42 LYS 42 A LEU 43 n 43 LEU 43 A ASN 44 n 44 ASN 44 A ASP 45 n 45 ASP 45 A GLY 46 n 46 GLY 46 A THR 47 n 47 THR 47 A HIS 48 n 48 HIS 48 A VAL 49 n 49 VAL 49 A ILE 50 n 50 ILE 50 A PHE 51 n 51 PHE 51 A SER 52 n 52 SER 52 A GLY 53 n 53 GLY 53 A GLU 54 n 54 GLU 54 A THR 55 n 55 THR 55 A THR 56 n 56 THR 56 A PHE 57 n 57 PHE 57 A GLY 58 n 58 GLY 58 A TYR 59 n 59 TYR 59 A LYS 60 n 60 LYS 60 A GLU 61 n 61 GLU 61 A TRP 62 n 62 TRP 62 A SER 63 n 63 SER 63 A GLY 64 n 64 GLY 64 A PRO 65 n 65 PRO 65 A LEU 66 n 66 LEU 66 A ILE 67 n 67 ILE 67 A SER 68 n 68 SER 68 A VAL 69 n 69 VAL 69 A SER 70 n 70 SER 70 A GLY 71 n 71 GLY 71 A SER 72 n 72 SER 72 A ASP 73 n 73 ASP 73 A LEU 74 n 74 LEU 74 A THR 75 n 75 THR 75 A ILE 76 n 76 ILE 76 A THR 77 n 77 THR 77 A GLY 78 n 78 GLY 78 A ALA 79 n 79 ALA 79 A SER 80 n 80 SER 80 A GLY 81 n 81 GLY 81 A HIS 82 n 82 HIS 82 A SER 83 n 83 SER 83 A ILE 84 n 84 ILE 84 A ASN 85 n 85 ASN 85 A GLY 86 n 86 GLY 86 A ASP 87 n 87 ASP 87 A GLY 88 n 88 GLY 88 A SER 89 n 89 SER 89 A ARG 90 n 90 ARG 90 A TRP 91 n 91 TRP 91 A TRP 92 n 92 TRP 92 A ASP 93 n 93 ASP 93 A GLY 94 n 94 GLY 94 A GLN 95 n 95 GLU 95 A GLY 96 n 96 GLY 96 A GLY 97 n 97 GLY 97 A ASN 98 n 98 ASN 98 A GLY 99 n 99 GLY 99 A GLY 100 n 100 GLY 100 A LYS 101 n 101 LYS 101 A THR 102 n 102 THR 102 A LYS 103 n 103 LYS 103 A PRO 104 n 104 PRO 104 A LYS 105 n 105 LYS 105 A PHE 106 n 106 PHE 106 A PHE 107 n 107 PHE 107 A ALA 108 n 108 ALA 108 A ALA 109 n 109 ALA 109 A HIS 110 n 110 HIS 110 A SER 111 n 111 SER 111 A LEU 112 n 112 LEU 112 A THR 113 n 113 THR 113 A ASN 114 n 114 ASN 114 A SER 115 n 115 SER 115 A VAL 116 n 116 VAL 116 A ILE 117 n 117 ILE 117 A SER 118 n 118 SER 118 A GLY 119 n 119 GLY 119 A LEU 120 n 120 LEU 120 A LYS 121 n 121 LYS 121 A ILE 122 n 122 ILE 122 A VAL 123 n 123 VAL 123 A ASN 124 n 124 ASN 124 A SER 125 n 125 SER 125 A PRO 126 n 126 PRO 126 A VAL 127 n 127 VAL 127 A GLN 128 n 128 GLN 128 A VAL 129 n 129 VAL 129 A PHE 130 n 130 PHE 130 A SER 131 n 131 SER 131 A VAL 132 n 132 VAL 132 A ALA 133 n 133 ALA 133 A GLY 134 n 134 GLY 134 A SER 135 n 135 SER 135 A ASP 136 n 136 ASP 136 A TYR 137 n 137 TYR 137 A LEU 138 n 138 LEU 138 A THR 139 n 139 THR 139 A LEU 140 n 140 LEU 140 A LYS 141 n 141 LYS 141 A ASP 142 n 142 ASP 142 A ILE 143 n 143 ILE 143 A THR 144 n 144 THR 144 A ILE 145 n 145 ILE 145 A ASP 146 n 146 ASP 146 A ASN 147 n 147 ASN 147 A SER 148 n 148 SER 148 A ASP 149 n 149 ASP 149 A GLY 150 n 150 GLY 150 A ASP 151 n 151 ASP 151 A ASP 152 n 152 ASP 152 A ASN 153 n 153 ASN 153 A GLY 154 n 154 GLY 154 A GLY 155 n 155 GLY 155 A HIS 156 n 156 HIS 156 A ASN 157 n 157 ASN 157 A THR 158 n 158 THR 158 A ASP 159 n 159 ASP 159 A ALA 160 n 160 ALA 160 A PHE 161 n 161 PHE 161 A ASP 162 n 162 ASP 162 A ILE 163 n 163 ILE 163 A GLY 164 n 164 GLY 164 A THR 165 n 165 THR 165 A SER 166 n 166 SER 166 A THR 167 n 167 THR 167 A TYR 168 n 168 TYR 168 A VAL 169 n 169 VAL 169 A THR 170 n 170 THR 170 A ILE 171 n 171 ILE 171 A SER 172 n 172 SER 172 A GLY 173 n 173 GLY 173 A ALA 174 n 174 ALA 174 A THR 175 n 175 THR 175 A VAL 176 n 176 VAL 176 A TYR 177 n 177 TYR 177 A ASN 178 n 178 ASN 178 A GLN 179 n 179 GLN 179 A ASP 180 n 180 ASP 180 A ASP 181 n 181 ASP 181 A CYS 182 n 182 CYS 182 A VAL 183 n 183 VAL 183 A ALA 184 n 184 ALA 184 A VAL 185 n 185 VAL 185 A ASN 186 n 186 ASN 186 A SER 187 n 187 SER 187 A GLY 188 n 188 GLY 188 A GLU 189 n 189 GLU 189 A ASN 190 n 190 ASN 190 A ILE 191 n 191 ILE 191 A TYR 192 n 192 TYR 192 A PHE 193 n 193 PHE 193 A SER 194 n 194 SER 194 A GLY 195 n 195 GLY 195 A GLY 196 n 196 GLY 196 A TYR 197 n 197 TYR 197 A CYS 198 n 198 CYS 198 A SER 199 n 199 SER 199 A GLY 200 n 200 GLY 200 A GLY 201 n 201 GLY 201 A HIS 202 n 202 HIS 202 A GLY 203 n 203 GLY 203 A LEU 204 n 204 LEU 204 A SER 205 n 205 SER 205 A ILE 206 n 206 ILE 206 A GLY 207 n 207 GLY 207 A SER 208 n 208 SER 208 A VAL 209 n 209 VAL 209 A GLY 210 n 210 GLY 210 A GLY 211 n 211 GLY 211 A ARG 212 n 212 ARG 212 A SER 213 n 213 SER 213 A ASP 214 n 214 ASP 214 A ASN 215 n 215 ASN 215 A THR 216 n 216 THR 216 A VAL 217 n 217 VAL 217 A LYS 218 n 218 LYS 218 A ASN 219 n 219 ASN 219 A VAL 220 n 220 VAL 220 A THR 221 n 221 THR 221 A PHE 222 n 222 PHE 222 A VAL 223 n 223 VAL 223 A ASP 224 n 224 ASP 224 A SER 225 n 225 SER 225 A THR 226 n 226 THR 226 A ILE 227 n 227 ILE 227 A ILE 228 n 228 ILE 228 A ASN 229 n 229 ASN 229 A SER 230 n 230 SER 230 A ASP 231 n 231 ASP 231 A ASN 232 n 232 ASN 232 A GLY 233 n 233 GLY 233 A VAL 234 n 234 VAL 234 A ARG 235 n 235 ARG 235 A ILE 236 n 236 ILE 236 A LYS 237 n 237 LYS 237 A THR 238 n 238 THR 238 A ASN 239 n 239 ASN 239 A ILE 240 n 240 ILE 240 A ASP 241 n 241 ASP 241 A THR 242 n 242 THR 242 A THR 243 n 243 THR 243 A GLY 244 n 244 GLY 244 A SER 245 n 245 SER 245 A VAL 246 n 246 VAL 246 A SER 247 n 247 SER 247 A ASP 248 n 248 ASP 248 A VAL 249 n 249 VAL 249 A THR 250 n 250 THR 250 A TYR 251 n 251 TYR 251 A LYS 252 n 252 LYS 252 A ASP 253 n 253 ASP 253 A ILE 254 n 254 ILE 254 A THR 255 n 255 THR 255 A LEU 256 n 256 LEU 256 A THR 257 n 257 THR 257 A SER 258 n 258 SER 258 A ILE 259 n 259 ILE 259 A ALA 260 n 260 ALA 260 A LYS 261 n 261 LYS 261 A TYR 262 n 262 TYR 262 A GLY 263 n 263 GLY 263 A ILE 264 n 264 ILE 264 A VAL 265 n 265 VAL 265 A VAL 266 n 266 VAL 266 A GLN 267 n 267 GLN 267 A GLN 268 n 268 GLN 268 A ASN 269 n 269 ASN 269 A TYR 270 n 270 TYR 270 A GLY 271 n 271 GLY 271 A ASP 272 n 272 ASP 272 A THR 273 n 273 THR 273 A SER 274 n 274 SER 274 A SER 275 n 275 SER 275 A THR 276 n 276 THR 276 A PRO 277 n 277 PRO 277 A THR 278 n 278 THR 278 A THR 279 n 279 THR 279 A GLY 280 n 280 GLY 280 A VAL 281 n 281 VAL 281 A PRO 282 n 282 PRO 282 A ILE 283 n 283 ILE 283 A THR 284 n 284 THR 284 A ASP 285 n 285 ASP 285 A PHE 286 n 286 PHE 286 A VAL 287 n 287 VAL 287 A LEU 288 n 288 LEU 288 A ASP 289 n 289 ASP 289 A ASN 290 n 290 ASN 290 A VAL 291 n 291 VAL 291 A HIS 292 n 292 HIS 292 A GLY 293 n 293 GLY 293 A SER 294 n 294 SER 294 A VAL 295 n 295 VAL 295 A VAL 296 n 296 VAL 296 A SER 297 n 297 SER 297 A SER 298 n 298 SER 298 A GLY 299 n 299 GLY 299 A THR 300 n 300 THR 300 A ASN 301 n 301 ASN 301 A ILE 302 n 302 ILE 302 A LEU 303 n 303 LEU 303 A ILE 304 n 304 ILE 304 A SER 305 n 305 SER 305 A CYS 306 n 306 CYS 306 A GLY 307 n 307 GLY 307 A SER 308 n 308 SER 308 A GLY 309 n 309 GLY 309 A SER 310 n 310 SER 310 A CYS 311 n 311 CYS 311 A SER 312 n 312 SER 312 A ASP 313 n 313 ASP 313 A TRP 314 n 314 TRP 314 A THR 315 n 315 THR 315 A TRP 316 n 316 TRP 316 A THR 317 n 317 THR 317 A ASP 318 n 318 ASP 318 A VAL 319 n 319 VAL 319 A SER 320 n 320 SER 320 A VAL 321 n 321 VAL 321 A SER 322 n 322 SER 322 A GLY 323 n 323 GLY 323 A GLY 324 n 324 GLY 324 A LYS 325 n 325 LYS 325 A THR 326 n 326 THR 326 A SER 327 n 327 SER 327 A SER 328 n 328 SER 328 A LYS 329 n 329 LYS 329 A CYS 330 n 330 CYS 330 A THR 331 n 331 THR 331 A ASN 332 n 332 ASN 332 A VAL 333 n 333 VAL 333 A PRO 334 n 334 PRO 334 A SER 335 n 335 SER 335 A GLY 336 n 336 GLY 336 A ALA 337 n 337 ALA 337 A SER 338 n 338 SER 338 A CYS 339 n 339 CYS 339 A author_defined_assembly 1 monomeric A SER 9 GLYCOSYLATION SITE A SER 9 SER A THR 24 GLYCOSYLATION SITE A THR 24 THR A THR 5 GLYCOSYLATION SITE A THR 5 THR A SER 23 GLYCOSYLATION SITE A SER 23 SER A SER 7 GLYCOSYLATION SITE A SER 7 SER A SER 18 GLYCOSYLATION SITE A SER 18 SER A SER 14 GLYCOSYLATION SITE A SER 14 SER A SER 16 GLYCOSYLATION SITE A SER 16 SER A SER 34 GLYCOSYLATION SITE A SER 34 SER A SER 13 GLYCOSYLATION SITE A SER 13 SER A ASN 219 GLYCOSYLATION SITE A ASN 219 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N CYS 4 A N CYS 4 A O THR 24 A O THR 24 A N ILE 25 A N ILE 25 A O HIS 48 A O HIS 48 A N VAL 49 A N VAL 49 A O THR 75 A O THR 75 A N ILE 76 A N ILE 76 A O VAL 116 A O VAL 116 A N ALA 108 A N ALA 108 A O ILE 67 A O ILE 67 A N SER 68 A N SER 68 A O LEU 38 A O LEU 38 A O LEU 38 A O LEU 38 A N SER 68 A N SER 68 A O ILE 67 A O ILE 67 A N ALA 108 A N ALA 108 A O PHE 107 A O PHE 107 A N SER 131 A N SER 131 A N VAL 132 A N VAL 132 A O ASP 162 A O ASP 162 A N ILE 163 A N ILE 163 A O ALA 184 A O ALA 184 A O VAL 183 A O VAL 183 A N SER 205 A N SER 205 A N LEU 204 A N LEU 204 A O GLY 233 A O GLY 233 A N GLY 233 A N GLY 233 A O TYR 262 A O TYR 262 A N GLY 263 A N GLY 263 A O THR 300 A O THR 300 A O THR 300 A O THR 300 A N GLY 263 A N GLY 263 A O TYR 262 A O TYR 262 A N GLY 233 A N GLY 233 A O GLY 233 A O GLY 233 A N LEU 204 A N LEU 204 A N SER 205 A N SER 205 A O VAL 183 A O VAL 183 A N ALA 184 A N ALA 184 A O PHE 161 A O PHE 161 A N ASP 162 A N ASP 162 A O PHE 130 A O PHE 130 A N SER 131 A N SER 131 A O PHE 107 A O PHE 107 A N ASN 114 A N ASN 114 A O ASP 136 A O ASP 136 A N TYR 137 A N TYR 137 A O THR 167 A O THR 167 A N TYR 168 A N TYR 168 A O GLU 189 A O GLU 189 A N GLY 188 A N GLY 188 A O THR 216 A O THR 216 A N VAL 217 A N VAL 217 A O SER 245 A O SER 245 A O VAL 246 A O VAL 246 A N THR 284 A N THR 284 A O ILE 283 A O ILE 283 A N SER 312 A N SER 312 A N SER 312 A N SER 312 A O ILE 283 A O ILE 283 A N THR 284 A N THR 284 A O VAL 246 A O VAL 246 A O SER 245 A O SER 245 A N VAL 217 A N VAL 217 A O THR 226 A O THR 226 A N CYS 198 A N CYS 198 A N SER 199 A N SER 199 A O VAL 176 A O VAL 176 A O THR 175 A O THR 175 A N ILE 145 A N ILE 145 A O THR 144 A O THR 144 A N ILE 122 A N ILE 122 A O LYS 121 A O LYS 121 A N ILE 84 A N ILE 84 A N ASN 85 A N ASN 85 A O THR 55 A O THR 55 A O THR 56 A O THR 56 A N VAL 32 A N VAL 32 1 9.28 1.40 123.60 132.88 A A A CD NE CZ ARG ARG ARG 212 212 212 N 1 15.10 2.10 122.30 137.40 A A A C N CA GLY GLY GLY 323 324 324 Y 1 A A CD OE2 GLU GLU 95 95 0.066 0.011 1.252 1.318 N 1 A LEU 38 -68.98 98.17 1 A ASP 93 -141.52 18.13 1 A VAL 127 -145.79 -131.63 1 A VAL 129 -94.20 -81.63 1 A THR 158 -97.18 44.68 1 A ASP 159 -39.70 131.47 1 A THR 165 37.35 54.46 1 A ASP 180 -147.04 -159.87 1 A ASN 190 62.24 63.55 1 A ASN 219 59.34 75.74 1 A ASP 272 -154.41 79.71 0.215 0.171 0.165 0.165 2.00 44.74 1060 21242 21242 4.990 RANDOM 1 THROUGHOUT 0 0 MIR Engh & Huber 0.25 0.19 5.0 0.22 0.15 2.00 44.74 193 2775 149 0 2433 0.005 1.3 2.36 1.82 0.267 0.020 0.202 2.13 172 2976 81.8 3.3 2.0 50.0 1IA5 52967 23026 2 4 0.056 1 11.5 2.3 85.1 0.124 2.00 2.13 1 5.3 81.8 data collection MADNESS data scaling SCALA phasing SHARP refinement CNS data reduction MADNESS data scaling CCP4 (SCALA) polygalacturonase (E.C.3.2.1.15) POLYGALACTURONASE FROM ASPERGILLUS ACULEATUS 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N A ASN 10 A ASN 10 HELX_P A LYS 19 A LYS 19 1 1 10 A THR 20 A THR 20 HELX_P A CYS 22 A CYS 22 5 2 3 A ASP 87 A ASP 87 HELX_P A TRP 91 A TRP 91 5 3 5 A SER 148 A SER 148 HELX_P A ASP 151 A ASP 151 5 4 4 disulf 2.041 A CYS 4 A SG CYS 4 1_555 A CYS 22 A SG CYS 22 1_555 disulf 2.007 A CYS 182 A SG CYS 182 1_555 A CYS 198 A SG CYS 198 1_555 disulf 2.022 A CYS 306 A SG CYS 306 1_555 A CYS 311 A SG CYS 311 1_555 disulf 1.996 A CYS 330 A SG CYS 330 1_555 A CYS 339 A SG CYS 339 1_555 covale 1.391 one O-Glycosylation A THR 5 A OG1 THR 5 1_555 A MAN 405 C C1 MAN 1_555 covale 1.395 one O-Glycosylation A SER 7 A OG SER 7 1_555 A MAN 407 D C1 MAN 1_555 covale 1.388 one O-Glycosylation A SER 9 A OG SER 9 1_555 A MAN 409 E C1 MAN 1_555 covale 1.401 one O-Glycosylation A SER 13 A OG SER 13 1_555 A MAN 413 F C1 MAN 1_555 covale 1.397 one O-Glycosylation A SER 14 A OG SER 14 1_555 A MAN 414 G C1 MAN 1_555 covale 1.398 one O-Glycosylation A SER 16 A OG SER 16 1_555 A MAN 416 H C1 MAN 1_555 covale 1.395 one O-Glycosylation A SER 18 A OG SER 18 1_555 A MAN 418 I C1 MAN 1_555 covale 1.393 one O-Glycosylation A SER 23 A OG SER 23 1_555 A MAN 423 J C1 MAN 1_555 covale 1.390 one O-Glycosylation A THR 24 A OG1 THR 24 1_555 A MAN 424 K C1 MAN 1_555 covale 1.399 one O-Glycosylation A SER 34 A OG SER 34 1_555 A MAN 434 L C1 MAN 1_555 covale 1.454 one N-Glycosylation A ASN 219 A ND2 ASN 219 1_555 B NAG 1 B C1 NAG 1_555 covale 1.382 both B NAG 1 B O4 NAG 1_555 B NAG 2 B C1 NAG 1_555 covale 1.342 both B NAG 2 B O4 NAG 1_555 B MAN 3 B C1 MAN 1_555 HYDROLASE POLYGALACTURONASE, GLYCOSYLHYDROLASE, HYDROLASE A GLY 64 A GLY 64 1 A PRO 65 A PRO 65 0.76 A GLY 207 A GLY 207 1 A SER 208 A SER 208 4.49 AAC23565 GB 1 40 3220207 40 378 1IA5 1 339 3220207 A 1 1 339 40 parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel A THR 3 A THR 3 A SER 7 A SER 7 A THR 24 A THR 24 A SER 28 A SER 28 A HIS 48 A HIS 48 A SER 52 A SER 52 A THR 75 A THR 75 A GLY 78 A GLY 78 A PHE 107 A PHE 107 A SER 118 A SER 118 A ILE 67 A ILE 67 A SER 72 A SER 72 A LEU 38 A LEU 38 A LEU 40 A LEU 40 A ILE 67 A ILE 67 A SER 72 A SER 72 A PHE 107 A PHE 107 A SER 118 A SER 118 A PHE 130 A PHE 130 A ALA 133 A ALA 133 A PHE 161 A PHE 161 A GLY 164 A GLY 164 A VAL 183 A VAL 183 A VAL 185 A VAL 185 A LEU 204 A LEU 204 A VAL 209 A VAL 209 A ASN 232 A ASN 232 A ASN 239 A ASN 239 A TYR 262 A TYR 262 A TYR 270 A TYR 270 A THR 300 A THR 300 A SER 305 A SER 305 A TYR 262 A TYR 262 A TYR 270 A TYR 270 A ASN 232 A ASN 232 A ASN 239 A ASN 239 A LEU 204 A LEU 204 A VAL 209 A VAL 209 A VAL 183 A VAL 183 A VAL 185 A VAL 185 A PHE 161 A PHE 161 A GLY 164 A GLY 164 A PHE 130 A PHE 130 A ALA 133 A ALA 133 A PHE 107 A PHE 107 A SER 118 A SER 118 A ASP 136 A ASP 136 A LYS 141 A LYS 141 A THR 167 A THR 167 A SER 172 A SER 172 A GLY 188 A GLY 188 A SER 194 A SER 194 A THR 216 A THR 216 A ILE 228 A ILE 228 A SER 245 A SER 245 A ILE 259 A ILE 259 A ILE 283 A ILE 283 A VAL 295 A VAL 295 A CYS 311 A CYS 311 A SER 322 A SER 322 A ILE 283 A ILE 283 A VAL 295 A VAL 295 A SER 245 A SER 245 A ILE 259 A ILE 259 A THR 216 A THR 216 A ILE 228 A ILE 228 A TYR 197 A TYR 197 A SER 199 A SER 199 A THR 175 A THR 175 A TYR 177 A TYR 177 A THR 144 A THR 144 A ASP 146 A ASP 146 A LYS 121 A LYS 121 A VAL 123 A VAL 123 A SER 83 A SER 83 A ASN 85 A ASN 85 A GLU 54 A GLU 54 A PHE 57 A PHE 57 A ALA 31 A ALA 31 A VAL 32 A VAL 32 18 P 21 21 2