0.010677 0.000000 0.008327 0.000000 0.011797 0.000000 0.000000 0.000000 0.018096 0.00000 0.00000 0.00000 CIS PROLINE - PRO L 8 CIS PROLINE - PRO L 77 CIS PROLINE - PRO L 95 CIS PROLINE - PRO L 141 GLY H 8 - PRO H 9 OMEGA = 236.30 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION CIS PROLINE - PRO H 149 CIS PROLINE - PRO H 151 TRP H 199 - PRO H 200 OMEGA = 215.31 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION Jeffrey, P.D. Sheriff, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 127.95 90.00 93.660 84.770 70.080 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cu 2 63.546 COPPER (II) ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C29 H44 O12 584.652 OUABAIN non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 248 344 360 7739045 Structure and Specificity of the Anti-Digoxin Antibody 40-50 1995 To be Published 0353 Crystallization and Preliminary X-Ray Analysis of Anti-Digoxin Antibodies 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 23842.357 IGG2B-KAPPA 40-50 FAB (LIGHT CHAIN) 1 man polymer 23146.904 IGG2B-KAPPA 40-50 FAB (HEAVY CHAIN) 1 man polymer 63.546 COPPER (II) ION 1 syn non-polymer 584.652 OUABAIN 1 syn non-polymer 18.015 water 1 nat water no no IVLTQSPASLAVSLGQRATISCRASKSVSTSGYSHIHWYQQKPGQPPKLLIYLASILESGVPARFSGSGSGTDFTLNIHP VEEEDAATYYCQHSREYPLTFGAGTELELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC IVLTQSPASLAVSLGQRATISCRASKSVSTSGYSHIHWYQQKPGQPPKLLIYLASILESGVPARFSGSGSGTDFTLNIHP VEEEDAATYYCQHSREYPLTFGAGTELELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC L polypeptide(L) no no VHLVQSGPGLVAPSQSLSITCTVSGFSLTTYGVHWFRQPPGKGLEWLGLIWAGGNTDYNSALMSRLSINKDNSKSQVFLK MNSLQADDTAMYYCARFRFASYYDYAVDYWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTSGCLVKGYFPEPVTVT WNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKL VHLVQSGPGLVAPSQSLSITCTVSGFSLTTYGVHWFRQPPGKGLEWLGLIWAGGNTDYNSALMSRLSINKDNSKSQVFLK MNSLQADDTAMYYCARFRFASYYDYAVDYWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTSGCLVKGYFPEPVTVT WNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKL H polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n mouse A/J sample 10090 Mus musculus mouse sample 10090 Mus musculus 2.33 47.28 repository Initial release Version format compliance Version format compliance Source and taxonomy 1 0 1995-05-08 1 1 2008-03-03 1 2 2011-07-13 1 3 2013-09-18 Y 1994-10-25 REL REL CU COPPER (II) ION OBN OUABAIN HOH water THE FAB LIGHT CHAIN (RESIDUES 1 - 214) HAS BEEN ASSIGNED CHAIN INDICATOR L. THE FAB HEAVY CHAIN (RESIDUES 1 - 223) HAS BEEN ASSIGNED CHAIN INDICATOR H. THE FAB FRAGMENT IS NUMBERED BY THE CONVENTION OF E. KABAT (E.A. KABAT, T.T. WU, H.M. PERRY, K.S. GOTTESMAN, C. FOELLER SEQUENCES OF PROTEINS OF IMMUNOLOGICAL INTEREST, 5TH ED., (1991), NATIONAL INSTITUTES OF HEALTH, BETHESDA, MD.). RESIDUE 1 (ASP) OF THE LIGHT CHAIN (L) AND RESIDUE 1 (GLN) OF THE HEAVY CHAIN (H) ARE MISSING FROM THE MODEL DUE TO NO ELECTRON DENSITY. CU 1 3 CU CU 1 L OBN 1 4 OBN OBN 1 H HOH 2 5 HOH HOH 215 L ILE 2 n 1 ILE 2 L VAL 3 n 2 VAL 3 L LEU 4 n 3 LEU 4 L THR 5 n 4 THR 5 L GLN 6 n 5 GLN 6 L SER 7 n 6 SER 7 L PRO 8 n 7 PRO 8 L ALA 9 n 8 ALA 9 L SER 10 n 9 SER 10 L LEU 11 n 10 LEU 11 L ALA 12 n 11 ALA 12 L VAL 13 n 12 VAL 13 L SER 14 n 13 SER 14 L LEU 15 n 14 LEU 15 L GLY 16 n 15 GLY 16 L GLN 17 n 16 GLN 17 L ARG 18 n 17 ARG 18 L ALA 19 n 18 ALA 19 L THR 20 n 19 THR 20 L ILE 21 n 20 ILE 21 L SER 22 n 21 SER 22 L CYS 23 n 22 CYS 23 L ARG 24 n 23 ARG 24 L ALA 25 n 24 ALA 25 L SER 26 n 25 SER 26 L LYS 27 n 26 LYS 27 L SER 27 n 27 A SER 27 L VAL 27 n 28 B VAL 27 L SER 27 n 29 C SER 27 L THR 27 n 30 D THR 27 L SER 28 n 31 SER 28 L GLY 29 n 32 GLY 29 L TYR 30 n 33 TYR 30 L SER 31 n 34 SER 31 L HIS 32 n 35 HIS 32 L ILE 33 n 36 ILE 33 L HIS 34 n 37 HIS 34 L TRP 35 n 38 TRP 35 L TYR 36 n 39 TYR 36 L GLN 37 n 40 GLN 37 L GLN 38 n 41 GLN 38 L LYS 39 n 42 LYS 39 L PRO 40 n 43 PRO 40 L GLY 41 n 44 GLY 41 L GLN 42 n 45 GLN 42 L PRO 43 n 46 PRO 43 L PRO 44 n 47 PRO 44 L LYS 45 n 48 LYS 45 L LEU 46 n 49 LEU 46 L LEU 47 n 50 LEU 47 L ILE 48 n 51 ILE 48 L TYR 49 n 52 TYR 49 L LEU 50 n 53 LEU 50 L ALA 51 n 54 ALA 51 L SER 52 n 55 SER 52 L ILE 53 n 56 ILE 53 L LEU 54 n 57 LEU 54 L GLU 55 n 58 GLU 55 L SER 56 n 59 SER 56 L GLY 57 n 60 GLY 57 L VAL 58 n 61 VAL 58 L PRO 59 n 62 PRO 59 L ALA 60 n 63 ALA 60 L ARG 61 n 64 ARG 61 L PHE 62 n 65 PHE 62 L SER 63 n 66 SER 63 L GLY 64 n 67 GLY 64 L SER 65 n 68 SER 65 L GLY 66 n 69 GLY 66 L SER 67 n 70 SER 67 L GLY 68 n 71 GLY 68 L THR 69 n 72 THR 69 L ASP 70 n 73 ASP 70 L PHE 71 n 74 PHE 71 L THR 72 n 75 THR 72 L LEU 73 n 76 LEU 73 L ASN 74 n 77 ASN 74 L ILE 75 n 78 ILE 75 L HIS 76 n 79 HIS 76 L PRO 77 n 80 PRO 77 L VAL 78 n 81 VAL 78 L GLU 79 n 82 GLU 79 L GLU 80 n 83 GLU 80 L GLU 81 n 84 GLU 81 L ASP 82 n 85 ASP 82 L ALA 83 n 86 ALA 83 L ALA 84 n 87 ALA 84 L THR 85 n 88 THR 85 L TYR 86 n 89 TYR 86 L TYR 87 n 90 TYR 87 L CYS 88 n 91 CYS 88 L GLN 89 n 92 GLN 89 L HIS 90 n 93 HIS 90 L SER 91 n 94 SER 91 L ARG 92 n 95 ARG 92 L GLU 93 n 96 GLU 93 L TYR 94 n 97 TYR 94 L PRO 95 n 98 PRO 95 L LEU 96 n 99 LEU 96 L THR 97 n 100 THR 97 L PHE 98 n 101 PHE 98 L GLY 99 n 102 GLY 99 L ALA 100 n 103 ALA 100 L GLY 101 n 104 GLY 101 L THR 102 n 105 THR 102 L GLU 103 n 106 GLU 103 L LEU 104 n 107 LEU 104 L GLU 105 n 108 GLU 105 L LEU 106 n 109 LEU 106 L LYS 107 n 110 LYS 107 L ARG 108 n 111 ARG 108 L ALA 109 n 112 ALA 109 L ASP 110 n 113 ASP 110 L ALA 111 n 114 ALA 111 L ALA 112 n 115 ALA 112 L PRO 113 n 116 PRO 113 L THR 114 n 117 THR 114 L VAL 115 n 118 VAL 115 L SER 116 n 119 SER 116 L ILE 117 n 120 ILE 117 L PHE 118 n 121 PHE 118 L PRO 119 n 122 PRO 119 L PRO 120 n 123 PRO 120 L SER 121 n 124 SER 121 L SER 122 n 125 SER 122 L GLU 123 n 126 GLU 123 L GLN 124 n 127 GLN 124 L LEU 125 n 128 LEU 125 L THR 126 n 129 THR 126 L SER 127 n 130 SER 127 L GLY 128 n 131 GLY 128 L GLY 129 n 132 GLY 129 L ALA 130 n 133 ALA 130 L SER 131 n 134 SER 131 L VAL 132 n 135 VAL 132 L VAL 133 n 136 VAL 133 L CYS 134 n 137 CYS 134 L PHE 135 n 138 PHE 135 L LEU 136 n 139 LEU 136 L ASN 137 n 140 ASN 137 L ASN 138 n 141 ASN 138 L PHE 139 n 142 PHE 139 L TYR 140 n 143 TYR 140 L PRO 141 n 144 PRO 141 L LYS 142 n 145 LYS 142 L ASP 143 n 146 ASP 143 L ILE 144 n 147 ILE 144 L ASN 145 n 148 ASN 145 L VAL 146 n 149 VAL 146 L LYS 147 n 150 LYS 147 L TRP 148 n 151 TRP 148 L LYS 149 n 152 LYS 149 L ILE 150 n 153 ILE 150 L ASP 151 n 154 ASP 151 L GLY 152 n 155 GLY 152 L SER 153 n 156 SER 153 L GLU 154 n 157 GLU 154 L ARG 155 n 158 ARG 155 L GLN 156 n 159 GLN 156 L ASN 157 n 160 ASN 157 L GLY 158 n 161 GLY 158 L VAL 159 n 162 VAL 159 L LEU 160 n 163 LEU 160 L ASN 161 n 164 ASN 161 L SER 162 n 165 SER 162 L TRP 163 n 166 TRP 163 L THR 164 n 167 THR 164 L ASP 165 n 168 ASP 165 L GLN 166 n 169 GLN 166 L ASP 167 n 170 ASP 167 L SER 168 n 171 SER 168 L LYS 169 n 172 LYS 169 L ASP 170 n 173 ASP 170 L SER 171 n 174 SER 171 L THR 172 n 175 THR 172 L TYR 173 n 176 TYR 173 L SER 174 n 177 SER 174 L MET 175 n 178 MET 175 L SER 176 n 179 SER 176 L SER 177 n 180 SER 177 L THR 178 n 181 THR 178 L LEU 179 n 182 LEU 179 L THR 180 n 183 THR 180 L LEU 181 n 184 LEU 181 L THR 182 n 185 THR 182 L LYS 183 n 186 LYS 183 L ASP 184 n 187 ASP 184 L GLU 185 n 188 GLU 185 L TYR 186 n 189 TYR 186 L GLU 187 n 190 GLU 187 L ARG 188 n 191 ARG 188 L HIS 189 n 192 HIS 189 L ASN 190 n 193 ASN 190 L SER 191 n 194 SER 191 L TYR 192 n 195 TYR 192 L THR 193 n 196 THR 193 L CYS 194 n 197 CYS 194 L GLU 195 n 198 GLU 195 L ALA 196 n 199 ALA 196 L THR 197 n 200 THR 197 L HIS 198 n 201 HIS 198 L LYS 199 n 202 LYS 199 L THR 200 n 203 THR 200 L SER 201 n 204 SER 201 L THR 202 n 205 THR 202 L SER 203 n 206 SER 203 L PRO 204 n 207 PRO 204 L ILE 205 n 208 ILE 205 L VAL 206 n 209 VAL 206 L LYS 207 n 210 LYS 207 L SER 208 n 211 SER 208 L PHE 209 n 212 PHE 209 L ASN 210 n 213 ASN 210 L ARG 211 n 214 ARG 211 L ASN 212 n 215 ASN 212 L GLU 213 n 216 GLU 213 L CYS 214 n 217 CYS 214 L VAL 2 n 1 VAL 2 H HIS 3 n 2 HIS 3 H LEU 4 n 3 LEU 4 H VAL 5 n 4 VAL 5 H GLN 6 n 5 GLN 6 H SER 7 n 6 SER 7 H GLY 8 n 7 GLY 8 H PRO 9 n 8 PRO 9 H GLY 10 n 9 GLY 10 H LEU 11 n 10 LEU 11 H VAL 12 n 11 VAL 12 H ALA 13 n 12 ALA 13 H PRO 14 n 13 PRO 14 H SER 15 n 14 SER 15 H GLN 16 n 15 GLN 16 H SER 17 n 16 SER 17 H LEU 18 n 17 LEU 18 H SER 19 n 18 SER 19 H ILE 20 n 19 ILE 20 H THR 21 n 20 THR 21 H CYS 22 n 21 CYS 22 H THR 23 n 22 THR 23 H VAL 24 n 23 VAL 24 H SER 25 n 24 SER 25 H GLY 26 n 25 GLY 26 H PHE 27 n 26 PHE 27 H SER 28 n 27 SER 28 H LEU 29 n 28 LEU 29 H THR 30 n 29 THR 30 H THR 31 n 30 THR 31 H TYR 32 n 31 TYR 32 H GLY 33 n 32 GLY 33 H VAL 34 n 33 VAL 34 H HIS 35 n 34 HIS 35 H TRP 36 n 35 TRP 36 H PHE 37 n 36 PHE 37 H ARG 38 n 37 ARG 38 H GLN 39 n 38 GLN 39 H PRO 40 n 39 PRO 40 H PRO 41 n 40 PRO 41 H GLY 42 n 41 GLY 42 H LYS 43 n 42 LYS 43 H GLY 44 n 43 GLY 44 H LEU 45 n 44 LEU 45 H GLU 46 n 45 GLU 46 H TRP 47 n 46 TRP 47 H LEU 48 n 47 LEU 48 H GLY 49 n 48 GLY 49 H LEU 50 n 49 LEU 50 H ILE 51 n 50 ILE 51 H TRP 52 n 51 TRP 52 H ALA 53 n 52 ALA 53 H GLY 54 n 53 GLY 54 H GLY 55 n 54 GLY 55 H ASN 56 n 55 ASN 56 H THR 57 n 56 THR 57 H ASP 58 n 57 ASP 58 H TYR 59 n 58 TYR 59 H ASN 60 n 59 ASN 60 H SER 61 n 60 SER 61 H ALA 62 n 61 ALA 62 H LEU 63 n 62 LEU 63 H MET 64 n 63 MET 64 H SER 65 n 64 SER 65 H ARG 66 n 65 ARG 66 H LEU 67 n 66 LEU 67 H SER 68 n 67 SER 68 H ILE 69 n 68 ILE 69 H ASN 70 n 69 ASN 70 H LYS 71 n 70 LYS 71 H ASP 72 n 71 ASP 72 H ASN 73 n 72 ASN 73 H SER 74 n 73 SER 74 H LYS 75 n 74 LYS 75 H SER 76 n 75 SER 76 H GLN 77 n 76 GLN 77 H VAL 78 n 77 VAL 78 H PHE 79 n 78 PHE 79 H LEU 80 n 79 LEU 80 H LYS 81 n 80 LYS 81 H MET 82 n 81 MET 82 H ASN 82 n 82 A ASN 82 H SER 82 n 83 B SER 82 H LEU 82 n 84 C LEU 82 H GLN 83 n 85 GLN 83 H ALA 84 n 86 ALA 84 H ASP 85 n 87 ASP 85 H ASP 86 n 88 ASP 86 H THR 87 n 89 THR 87 H ALA 88 n 90 ALA 88 H MET 89 n 91 MET 89 H TYR 90 n 92 TYR 90 H TYR 91 n 93 TYR 91 H CYS 92 n 94 CYS 92 H ALA 93 n 95 ALA 93 H ARG 94 n 96 ARG 94 H PHE 95 n 97 PHE 95 H ARG 96 n 98 ARG 96 H PHE 97 n 99 PHE 97 H ALA 98 n 100 ALA 98 H SER 99 n 101 SER 99 H TYR 100 n 102 TYR 100 H TYR 100 n 103 A TYR 100 H ASP 100 n 104 B ASP 100 H TYR 100 n 105 C TYR 100 H ALA 100 n 106 D ALA 100 H VAL 100 n 107 E VAL 100 H ASP 101 n 108 ASP 101 H TYR 102 n 109 TYR 102 H TRP 103 n 110 TRP 103 H GLY 104 n 111 GLY 104 H GLN 105 n 112 GLN 105 H GLY 106 n 113 GLY 106 H THR 107 n 114 THR 107 H SER 108 n 115 SER 108 H VAL 109 n 116 VAL 109 H THR 110 n 117 THR 110 H VAL 111 n 118 VAL 111 H SER 112 n 119 SER 112 H SER 113 n 120 SER 113 H ALA 114 n 121 ALA 114 H LYS 115 n 122 LYS 115 H THR 116 n 123 THR 116 H THR 117 n 124 THR 117 H PRO 118 n 125 PRO 118 H PRO 119 n 126 PRO 119 H SER 120 n 127 SER 120 H VAL 121 n 128 VAL 121 H TYR 122 n 129 TYR 122 H PRO 123 n 130 PRO 123 H LEU 124 n 131 LEU 124 H ALA 125 n 132 ALA 125 H PRO 126 n 133 PRO 126 H GLY 127 n 134 GLY 127 H CYS 128 n 135 CYS 128 H GLY 129 n 136 GLY 129 H ASP 130 n 137 ASP 130 H THR 133 n 138 THR 133 H THR 134 n 139 THR 134 H GLY 135 n 140 GLY 135 H SER 136 n 141 SER 136 H SER 137 n 142 SER 137 H VAL 138 n 143 VAL 138 H THR 139 n 144 THR 139 H SER 140 n 145 SER 140 H GLY 141 n 146 GLY 141 H CYS 142 n 147 CYS 142 H LEU 143 n 148 LEU 143 H VAL 144 n 149 VAL 144 H LYS 145 n 150 LYS 145 H GLY 146 n 151 GLY 146 H TYR 147 n 152 TYR 147 H PHE 148 n 153 PHE 148 H PRO 149 n 154 PRO 149 H GLU 150 n 155 GLU 150 H PRO 151 n 156 PRO 151 H VAL 152 n 157 VAL 152 H THR 153 n 158 THR 153 H VAL 154 n 159 VAL 154 H THR 156 n 160 THR 156 H TRP 157 n 161 TRP 157 H ASN 162 n 162 ASN 162 H SER 163 n 163 SER 163 H GLY 164 n 164 GLY 164 H SER 165 n 165 SER 165 H LEU 166 n 166 LEU 166 H SER 167 n 167 SER 167 H SER 168 n 168 SER 168 H SER 169 n 169 SER 169 H VAL 171 n 170 VAL 171 H HIS 172 n 171 HIS 172 H THR 173 n 172 THR 173 H PHE 174 n 173 PHE 174 H PRO 175 n 174 PRO 175 H ALA 176 n 175 ALA 176 H LEU 177 n 176 LEU 177 H LEU 178 n 177 LEU 178 H GLN 179 n 178 GLN 179 H SER 180 n 179 SER 180 H GLY 183 n 180 GLY 183 H LEU 184 n 181 LEU 184 H TYR 185 n 182 TYR 185 H THR 186 n 183 THR 186 H MET 187 n 184 MET 187 H SER 188 n 185 SER 188 H SER 189 n 186 SER 189 H SER 190 n 187 SER 190 H VAL 191 n 188 VAL 191 H THR 192 n 189 THR 192 H VAL 193 n 190 VAL 193 H PRO 194 n 191 PRO 194 H SER 195 n 192 SER 195 H SER 196 n 193 SER 196 H THR 198 n 194 THR 198 H TRP 199 n 195 TRP 199 H PRO 200 n 196 PRO 200 H SER 202 n 197 SER 202 H GLN 203 n 198 GLN 203 H THR 204 n 199 THR 204 H VAL 205 n 200 VAL 205 H THR 206 n 201 THR 206 H CYS 208 n 202 CYS 208 H SER 209 n 203 SER 209 H VAL 210 n 204 VAL 210 H ALA 211 n 205 ALA 211 H HIS 212 n 206 HIS 212 H PRO 213 n 207 PRO 213 H ALA 214 n 208 ALA 214 H SER 215 n 209 SER 215 H SER 216 n 210 SER 216 H THR 217 n 211 THR 217 H THR 218 n 212 THR 218 H VAL 219 n 213 VAL 219 H ASP 220 n 214 ASP 220 H LYS 221 n 215 LYS 221 H LYS 222 n 216 LYS 222 H LEU 223 n 217 LEU 223 H author_and_software_defined_assembly PISA 2 dimeric software_defined_assembly PISA 4 tetrameric 4700 -34 18810 11380 -83 35630 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_555 -x,y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 L O THR 5 A O THR 4 L N ARG 24 A N ARG 23 L O ALA 19 A O ALA 18 L N ILE 75 A N ILE 78 L O ASP 70 A O ASP 73 L N SER 67 A N SER 70 L O LEU 11 A O LEU 10 L N GLU 103 A N GLU 106 L O THR 85 A O THR 88 L N GLN 38 A N GLN 41 L O TRP 35 A O TRP 38 L N ILE 48 A N ILE 51 L O THR 114 A O THR 117 L N ASN 137 A N ASN 140 L O ALA 130 A O ALA 133 L N LEU 181 A N LEU 184 L O SER 176 A O SER 179 L N SER 162 A N SER 165 L O ASN 145 A O ASN 148 L N THR 197 A N THR 200 L O TYR 192 A O TYR 195 L N PHE 209 A N PHE 212 H O VAL 5 B O VAL 4 H N THR 23 B N THR 22 H O LEU 18 B O LEU 17 H N MET 82 B N MET 81 H O GLN 77 B O GLN 76 H N ASP 72 B N ASP 71 H O GLY 10 B O GLY 9 H N THR 110 B N THR 117 H O THR 107 B O THR 114 H N TYR 90 B N TYR 92 H O MET 89 B O MET 91 H N GLN 39 B N GLN 38 H O VAL 34 B O VAL 33 H N ILE 51 B N ILE 50 H O LEU 50 B O LEU 49 H N ASP 58 B N ASP 57 H O SER 120 B O SER 127 H N LYS 145 B N LYS 150 H O VAL 138 B O VAL 143 H N VAL 193 B N VAL 190 H O SER 188 B O SER 185 H N PHE 174 B N PHE 173 H O THR 153 B O THR 158 H N ALA 211 B N ALA 205 H O CYS 208 B O CYS 202 H N LYS 221 B N LYS 215 H N ARG 94 B N ARG 96 H O TYR 102 B O TYR 109 1 L CB GLU 154 A CB GLU 157 0 Y 1 L CG GLU 154 A CG GLU 157 0 Y 1 L CD GLU 154 A CD GLU 157 0 Y 1 L OE1 GLU 154 A OE1 GLU 157 0 Y 1 L OE2 GLU 154 A OE2 GLU 157 0 Y 1 L ILE 2 A ILE 1 0 Y 1 H ALA 125 B ALA 132 0 Y 1 H PRO 126 B PRO 133 0 Y 1 H GLY 127 B GLY 134 0 Y 1 H CYS 128 B CYS 135 0 Y 1 H GLY 129 B GLY 136 0 Y 1 H ASP 130 B ASP 137 0 Y 1 H THR 133 B THR 138 0 Y 1 H THR 134 B THR 139 0 Y 1 H GLY 135 B GLY 140 0 Y 1 H SER 136 B SER 141 0 Y 1 H SER 137 B SER 142 0 Y 1 H VAL 138 B VAL 143 0 Y 1 H THR 139 B THR 144 0 Y 1 H H GLY PRO 8 9 -123.70 1 H H TRP PRO 199 200 -144.69 1 L TYR 86 0.070 SIDE CHAIN 1 16.26 2.20 113.40 129.66 L L L CA CB CG GLU GLU GLU 81 81 81 N 1 13.82 2.20 113.40 127.22 L L L CA CB CG GLU GLU GLU 93 93 93 N 1 -13.26 2.20 117.20 103.94 L L L CA C N PRO PRO LEU 95 95 96 Y 1 10.72 1.60 122.70 133.42 L L L O C N PRO PRO LEU 95 95 96 Y 1 -9.77 1.60 110.90 101.13 L L L CG1 CB CG2 VAL VAL VAL 133 133 133 N 1 15.76 2.20 113.40 129.16 L L L CA CB CG GLU GLU GLU 185 185 185 N 1 13.44 2.20 113.40 126.84 L L L CA CB CG GLU GLU GLU 195 195 195 N 1 -17.03 2.70 111.00 93.97 H H H N CA C ALA ALA ALA 62 62 62 N 1 15.51 2.30 115.30 130.81 H H H CA CB CG LEU LEU LEU 67 67 67 N 1 -10.27 1.70 113.30 103.03 H H H CA CB CG MET MET MET 82 82 82 N 1 10.70 1.10 114.20 124.90 H H H CA CB SG CYS CYS CYS 92 92 92 N 1 -3.77 0.50 120.30 116.53 H H H NE CZ NH2 ARG ARG ARG 96 96 96 N 1 L CYS 23 -166.92 117.95 B 1 L VAL 27 -79.32 34.86 1 L SER 28 61.53 -134.14 1 L PRO 40 -17.55 -61.14 1 L ALA 51 58.99 -31.71 1 L ALA 60 -69.30 12.60 1 L ALA 83 -67.25 89.09 1 L SER 91 -144.20 34.36 1 L PRO 119 -57.21 170.07 1 L ASN 138 67.99 61.61 1 L PRO 141 -69.18 -171.49 1 L ASP 151 72.72 -47.83 1 L LYS 169 -97.61 -60.21 1 L SER 171 -86.31 42.81 1 L ASP 184 -67.73 15.79 1 L GLU 185 -151.01 -30.81 1 L GLU 187 -39.63 -27.97 1 L LYS 199 -7.37 -40.84 1 L ARG 211 -58.14 107.61 1 L GLU 213 70.21 32.45 1 H SER 15 51.78 -20.49 1 H LYS 43 -104.95 -150.11 1 H SER 61 -53.66 109.04 1 H ALA 62 154.34 -91.65 1 H MET 64 4.42 -66.35 1 H SER 76 60.30 62.72 B 1 H SER 82 75.14 51.34 B 1 H ASP 100 -169.86 103.52 1 H ASN 162 38.81 59.72 1 H SER 163 61.08 -5.80 1 H SER 167 -153.42 61.54 1 H GLN 179 -110.83 -124.71 1 H SER 196 167.04 -55.03 1 H TRP 199 -95.06 -91.11 1 H THR 204 66.91 110.59 1 H THR 218 -159.20 84.55 31.4 0.209 0.209 2.7 10.0 9717 1 1. 0.35 2.7 10.0 1 3348 42 0 3305 0.015 3.2 28.5 1.35 1IBG 12688 1 model building X-PLOR refinement X-PLOR phasing X-PLOR IGG FAB (IGG2B, KAPPA) FRAGMENT (40-50 FAB) COMPLEXED WITH OUABAIN STRUCTURE AND SPECIFICITY OF THE ANTI-DIGOXIN ANTIBODY 40-50 1 N N 2 N N 3 N N 4 N N 5 N N L LEU 50 A LEU 53 HELX_P L SER 52 A SER 55 5 1 3 L GLU 80 A GLU 83 HELX_P L ASP 82 A ASP 85 5 2 3 L SER 122 A SER 125 HELX_P L SER 127 A SER 130 1 3 6 L LYS 183 A LYS 186 HELX_P L ARG 188 A ARG 191 1 4 6 H LEU 63 B LEU 62 HELX_P H ARG 66 B ARG 65 5 5 4 H ASN 73 B ASN 72 HELX_P H LYS 75 B LYS 74 5 6 3 H ALA 84 B ALA 86 HELX_P H ASP 86 B ASP 88 5 7 3 H ASN 162 B ASN 162 HELX_P H GLY 164 B GLY 164 5 8 3 H PRO 213 B PRO 207 HELX_P H SER 215 B SER 209 5 9 3 disulf 2.034 L CYS 23 A SG CYS 22 1_555 L CYS 88 A SG CYS 91 1_555 disulf 2.014 L CYS 134 A SG CYS 137 1_555 L CYS 194 A SG CYS 197 1_555 disulf 2.018 H CYS 22 B SG CYS 21 1_555 H CYS 92 B SG CYS 94 1_555 disulf 2.034 H CYS 142 B SG CYS 147 1_555 H CYS 208 B SG CYS 202 1_555 IMMUNE SYSTEM IMMUNOGLOBULIN, FAB, COMPLEX, IMMUNE SYSTEM L SER 7 A SER 6 1 L PRO 8 A PRO 7 -13.06 L HIS 76 A HIS 79 1 L PRO 77 A PRO 80 -3.93 L TYR 94 A TYR 97 1 L PRO 95 A PRO 98 -1.53 L TYR 140 A TYR 143 1 L PRO 141 A PRO 144 -4.08 H PHE 148 B PHE 153 1 H PRO 149 B PRO 154 -13.91 H GLU 150 B GLU 155 1 H PRO 151 B PRO 156 22.23 JC5810 PIR 1 1 JC5810 NIVLTQSPASLAVSLGQRATISCRASKSVSASGYIYMHWYQQKPGQPPKLLISLASNLESGVPARFSGSGSGTDFTLNIH PVEEEDVATYYCQHSRELPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 1IBG PDB 2 1IBG 2 218 1IBG 2 214 JC5810 L 1 1 217 2 223 1IBG 2 223 1IBG H 2 1 217 1 ALA CONFLICT THR 27 1IBG D L JC5810 PIR 31 30 1 ILE CONFLICT SER 31 1IBG L JC5810 PIR 35 34 1 TYR CONFLICT HIS 32 1IBG L JC5810 PIR 36 35 1 MET CONFLICT ILE 33 1IBG L JC5810 PIR 37 36 1 SER CONFLICT TYR 49 1IBG L JC5810 PIR 53 52 1 ASN CONFLICT ILE 53 1IBG L JC5810 PIR 57 56 1 VAL CONFLICT ALA 83 1IBG L JC5810 PIR 87 86 1 LEU CONFLICT TYR 94 1IBG L JC5810 PIR 98 97 1 LYS CONFLICT GLU 103 1IBG L JC5810 PIR 107 106 4 2 3 4 3 4 6 4 3 2 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel L LEU 4 A LEU 3 L SER 7 A SER 6 L ALA 19 A ALA 18 L ALA 25 A ALA 24 L ASP 70 A ASP 73 L ILE 75 A ILE 78 L PHE 62 A PHE 65 L SER 67 A SER 70 L SER 10 A SER 9 L SER 14 A SER 13 L GLU 103 A GLU 106 L LYS 107 A LYS 110 L ALA 84 A ALA 87 L HIS 90 A HIS 93 L ILE 33 A ILE 36 L LYS 39 A LYS 42 L LYS 45 A LYS 48 L TYR 49 A TYR 52 L THR 114 A THR 117 L PHE 118 A PHE 121 L GLY 129 A GLY 132 L PHE 139 A PHE 142 L TYR 173 A TYR 176 L THR 182 A THR 185 L VAL 159 A VAL 162 L TRP 163 A TRP 166 L ASN 145 A ASN 148 L ILE 150 A ILE 153 L SER 191 A SER 194 L THR 197 A THR 200 L ILE 205 A ILE 208 L ASN 210 A ASN 213 H LEU 4 B LEU 3 H SER 7 B SER 6 H SER 17 B SER 16 H VAL 24 B VAL 23 H GLN 77 B GLN 76 H ASN 82 B ASN 82 A H LEU 67 B LEU 66 H ASP 72 B ASP 71 H GLY 10 B GLY 9 H VAL 12 B VAL 11 H THR 107 B THR 114 H VAL 111 B VAL 118 H ALA 88 B ALA 90 H PHE 95 B PHE 97 H GLY 33 B GLY 32 H GLN 39 B GLN 38 H LEU 45 B LEU 44 H ILE 51 B ILE 50 H THR 57 B THR 56 H TYR 59 B TYR 58 H SER 120 B SER 127 H ALA 125 B ALA 132 H SER 137 B SER 142 H TYR 147 B TYR 152 H TYR 185 B TYR 182 H PRO 194 B PRO 191 H VAL 171 B VAL 170 H PHE 174 B PHE 173 H THR 153 B THR 158 H TRP 157 B TRP 161 H THR 206 B THR 201 H HIS 212 B HIS 206 H THR 217 B THR 211 H LYS 222 B LYS 216 H ALA 88 B ALA 90 H ARG 94 B ARG 96 H TYR 102 B TYR 109 H VAL 109 B VAL 116 BINDING SITE FOR RESIDUE CU L 1 Software 1 BINDING SITE FOR RESIDUE OBN H 1 Software 12 L HIS 189 A HIS 192 1 2_555 H HIS 35 B HIS 34 12 1_555 H LEU 50 B LEU 49 12 1_555 H PHE 95 B PHE 97 12 1_555 H TYR 100 B TYR 102 12 1_555 H TYR 100 B TYR 105 C 12 1_555 H VAL 100 B VAL 107 E 12 1_555 L THR 27 A THR 30 D 12 1_555 L HIS 32 A HIS 35 12 1_555 L SER 91 A SER 94 12 1_555 L ARG 92 A ARG 95 12 1_555 L TYR 94 A TYR 97 12 1_555 L LEU 96 A LEU 99 12 1_555 5 C 1 2 1