0.010677
0.000000
0.008327
0.000000
0.011797
0.000000
0.000000
0.000000
0.018096
0.00000
0.00000
0.00000
CIS PROLINE - PRO L 8
CIS PROLINE - PRO L 77
CIS PROLINE - PRO L 95
CIS PROLINE - PRO L 141
GLY H 8 - PRO H 9 OMEGA = 236.30 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION
CIS PROLINE - PRO H 149
CIS PROLINE - PRO H 151
TRP H 199 - PRO H 200 OMEGA = 215.31 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION
Jeffrey, P.D.
Sheriff, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
127.95
90.00
93.660
84.770
70.080
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cu 2
63.546
COPPER (II) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C29 H44 O12
584.652
OUABAIN
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
248
344
360
7739045
Structure and Specificity of the Anti-Digoxin Antibody 40-50
1995
To be Published
0353
Crystallization and Preliminary X-Ray Analysis of Anti-Digoxin Antibodies
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
23842.357
IGG2B-KAPPA 40-50 FAB (LIGHT CHAIN)
1
man
polymer
23146.904
IGG2B-KAPPA 40-50 FAB (HEAVY CHAIN)
1
man
polymer
63.546
COPPER (II) ION
1
syn
non-polymer
584.652
OUABAIN
1
syn
non-polymer
18.015
water
1
nat
water
no
no
IVLTQSPASLAVSLGQRATISCRASKSVSTSGYSHIHWYQQKPGQPPKLLIYLASILESGVPARFSGSGSGTDFTLNIHP
VEEEDAATYYCQHSREYPLTFGAGTELELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN
GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
IVLTQSPASLAVSLGQRATISCRASKSVSTSGYSHIHWYQQKPGQPPKLLIYLASILESGVPARFSGSGSGTDFTLNIHP
VEEEDAATYYCQHSREYPLTFGAGTELELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN
GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
L
polypeptide(L)
no
no
VHLVQSGPGLVAPSQSLSITCTVSGFSLTTYGVHWFRQPPGKGLEWLGLIWAGGNTDYNSALMSRLSINKDNSKSQVFLK
MNSLQADDTAMYYCARFRFASYYDYAVDYWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTSGCLVKGYFPEPVTVT
WNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKL
VHLVQSGPGLVAPSQSLSITCTVSGFSLTTYGVHWFRQPPGKGLEWLGLIWAGGNTDYNSALMSRLSINKDNSKSQVFLK
MNSLQADDTAMYYCARFRFASYYDYAVDYWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTSGCLVKGYFPEPVTVT
WNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKL
H
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
mouse
A/J
sample
10090
Mus musculus
mouse
sample
10090
Mus musculus
2.33
47.28
repository
Initial release
Version format compliance
Version format compliance
Source and taxonomy
1
0
1995-05-08
1
1
2008-03-03
1
2
2011-07-13
1
3
2013-09-18
Y
1994-10-25
REL
REL
CU
COPPER (II) ION
OBN
OUABAIN
HOH
water
THE FAB LIGHT CHAIN (RESIDUES 1 - 214) HAS BEEN ASSIGNED
CHAIN INDICATOR L. THE FAB HEAVY CHAIN (RESIDUES 1 - 223)
HAS BEEN ASSIGNED CHAIN INDICATOR H. THE FAB FRAGMENT
IS NUMBERED BY THE CONVENTION OF E. KABAT (E.A. KABAT,
T.T. WU, H.M. PERRY, K.S. GOTTESMAN, C. FOELLER
SEQUENCES OF PROTEINS OF IMMUNOLOGICAL INTEREST, 5TH ED.,
(1991), NATIONAL INSTITUTES OF HEALTH, BETHESDA, MD.).
RESIDUE 1 (ASP) OF THE LIGHT CHAIN (L) AND RESIDUE 1 (GLN)
OF THE HEAVY CHAIN (H) ARE MISSING FROM THE MODEL DUE TO NO
ELECTRON DENSITY.
CU
1
3
CU
CU
1
L
OBN
1
4
OBN
OBN
1
H
HOH
2
5
HOH
HOH
215
L
ILE
2
n
1
ILE
2
L
VAL
3
n
2
VAL
3
L
LEU
4
n
3
LEU
4
L
THR
5
n
4
THR
5
L
GLN
6
n
5
GLN
6
L
SER
7
n
6
SER
7
L
PRO
8
n
7
PRO
8
L
ALA
9
n
8
ALA
9
L
SER
10
n
9
SER
10
L
LEU
11
n
10
LEU
11
L
ALA
12
n
11
ALA
12
L
VAL
13
n
12
VAL
13
L
SER
14
n
13
SER
14
L
LEU
15
n
14
LEU
15
L
GLY
16
n
15
GLY
16
L
GLN
17
n
16
GLN
17
L
ARG
18
n
17
ARG
18
L
ALA
19
n
18
ALA
19
L
THR
20
n
19
THR
20
L
ILE
21
n
20
ILE
21
L
SER
22
n
21
SER
22
L
CYS
23
n
22
CYS
23
L
ARG
24
n
23
ARG
24
L
ALA
25
n
24
ALA
25
L
SER
26
n
25
SER
26
L
LYS
27
n
26
LYS
27
L
SER
27
n
27
A
SER
27
L
VAL
27
n
28
B
VAL
27
L
SER
27
n
29
C
SER
27
L
THR
27
n
30
D
THR
27
L
SER
28
n
31
SER
28
L
GLY
29
n
32
GLY
29
L
TYR
30
n
33
TYR
30
L
SER
31
n
34
SER
31
L
HIS
32
n
35
HIS
32
L
ILE
33
n
36
ILE
33
L
HIS
34
n
37
HIS
34
L
TRP
35
n
38
TRP
35
L
TYR
36
n
39
TYR
36
L
GLN
37
n
40
GLN
37
L
GLN
38
n
41
GLN
38
L
LYS
39
n
42
LYS
39
L
PRO
40
n
43
PRO
40
L
GLY
41
n
44
GLY
41
L
GLN
42
n
45
GLN
42
L
PRO
43
n
46
PRO
43
L
PRO
44
n
47
PRO
44
L
LYS
45
n
48
LYS
45
L
LEU
46
n
49
LEU
46
L
LEU
47
n
50
LEU
47
L
ILE
48
n
51
ILE
48
L
TYR
49
n
52
TYR
49
L
LEU
50
n
53
LEU
50
L
ALA
51
n
54
ALA
51
L
SER
52
n
55
SER
52
L
ILE
53
n
56
ILE
53
L
LEU
54
n
57
LEU
54
L
GLU
55
n
58
GLU
55
L
SER
56
n
59
SER
56
L
GLY
57
n
60
GLY
57
L
VAL
58
n
61
VAL
58
L
PRO
59
n
62
PRO
59
L
ALA
60
n
63
ALA
60
L
ARG
61
n
64
ARG
61
L
PHE
62
n
65
PHE
62
L
SER
63
n
66
SER
63
L
GLY
64
n
67
GLY
64
L
SER
65
n
68
SER
65
L
GLY
66
n
69
GLY
66
L
SER
67
n
70
SER
67
L
GLY
68
n
71
GLY
68
L
THR
69
n
72
THR
69
L
ASP
70
n
73
ASP
70
L
PHE
71
n
74
PHE
71
L
THR
72
n
75
THR
72
L
LEU
73
n
76
LEU
73
L
ASN
74
n
77
ASN
74
L
ILE
75
n
78
ILE
75
L
HIS
76
n
79
HIS
76
L
PRO
77
n
80
PRO
77
L
VAL
78
n
81
VAL
78
L
GLU
79
n
82
GLU
79
L
GLU
80
n
83
GLU
80
L
GLU
81
n
84
GLU
81
L
ASP
82
n
85
ASP
82
L
ALA
83
n
86
ALA
83
L
ALA
84
n
87
ALA
84
L
THR
85
n
88
THR
85
L
TYR
86
n
89
TYR
86
L
TYR
87
n
90
TYR
87
L
CYS
88
n
91
CYS
88
L
GLN
89
n
92
GLN
89
L
HIS
90
n
93
HIS
90
L
SER
91
n
94
SER
91
L
ARG
92
n
95
ARG
92
L
GLU
93
n
96
GLU
93
L
TYR
94
n
97
TYR
94
L
PRO
95
n
98
PRO
95
L
LEU
96
n
99
LEU
96
L
THR
97
n
100
THR
97
L
PHE
98
n
101
PHE
98
L
GLY
99
n
102
GLY
99
L
ALA
100
n
103
ALA
100
L
GLY
101
n
104
GLY
101
L
THR
102
n
105
THR
102
L
GLU
103
n
106
GLU
103
L
LEU
104
n
107
LEU
104
L
GLU
105
n
108
GLU
105
L
LEU
106
n
109
LEU
106
L
LYS
107
n
110
LYS
107
L
ARG
108
n
111
ARG
108
L
ALA
109
n
112
ALA
109
L
ASP
110
n
113
ASP
110
L
ALA
111
n
114
ALA
111
L
ALA
112
n
115
ALA
112
L
PRO
113
n
116
PRO
113
L
THR
114
n
117
THR
114
L
VAL
115
n
118
VAL
115
L
SER
116
n
119
SER
116
L
ILE
117
n
120
ILE
117
L
PHE
118
n
121
PHE
118
L
PRO
119
n
122
PRO
119
L
PRO
120
n
123
PRO
120
L
SER
121
n
124
SER
121
L
SER
122
n
125
SER
122
L
GLU
123
n
126
GLU
123
L
GLN
124
n
127
GLN
124
L
LEU
125
n
128
LEU
125
L
THR
126
n
129
THR
126
L
SER
127
n
130
SER
127
L
GLY
128
n
131
GLY
128
L
GLY
129
n
132
GLY
129
L
ALA
130
n
133
ALA
130
L
SER
131
n
134
SER
131
L
VAL
132
n
135
VAL
132
L
VAL
133
n
136
VAL
133
L
CYS
134
n
137
CYS
134
L
PHE
135
n
138
PHE
135
L
LEU
136
n
139
LEU
136
L
ASN
137
n
140
ASN
137
L
ASN
138
n
141
ASN
138
L
PHE
139
n
142
PHE
139
L
TYR
140
n
143
TYR
140
L
PRO
141
n
144
PRO
141
L
LYS
142
n
145
LYS
142
L
ASP
143
n
146
ASP
143
L
ILE
144
n
147
ILE
144
L
ASN
145
n
148
ASN
145
L
VAL
146
n
149
VAL
146
L
LYS
147
n
150
LYS
147
L
TRP
148
n
151
TRP
148
L
LYS
149
n
152
LYS
149
L
ILE
150
n
153
ILE
150
L
ASP
151
n
154
ASP
151
L
GLY
152
n
155
GLY
152
L
SER
153
n
156
SER
153
L
GLU
154
n
157
GLU
154
L
ARG
155
n
158
ARG
155
L
GLN
156
n
159
GLN
156
L
ASN
157
n
160
ASN
157
L
GLY
158
n
161
GLY
158
L
VAL
159
n
162
VAL
159
L
LEU
160
n
163
LEU
160
L
ASN
161
n
164
ASN
161
L
SER
162
n
165
SER
162
L
TRP
163
n
166
TRP
163
L
THR
164
n
167
THR
164
L
ASP
165
n
168
ASP
165
L
GLN
166
n
169
GLN
166
L
ASP
167
n
170
ASP
167
L
SER
168
n
171
SER
168
L
LYS
169
n
172
LYS
169
L
ASP
170
n
173
ASP
170
L
SER
171
n
174
SER
171
L
THR
172
n
175
THR
172
L
TYR
173
n
176
TYR
173
L
SER
174
n
177
SER
174
L
MET
175
n
178
MET
175
L
SER
176
n
179
SER
176
L
SER
177
n
180
SER
177
L
THR
178
n
181
THR
178
L
LEU
179
n
182
LEU
179
L
THR
180
n
183
THR
180
L
LEU
181
n
184
LEU
181
L
THR
182
n
185
THR
182
L
LYS
183
n
186
LYS
183
L
ASP
184
n
187
ASP
184
L
GLU
185
n
188
GLU
185
L
TYR
186
n
189
TYR
186
L
GLU
187
n
190
GLU
187
L
ARG
188
n
191
ARG
188
L
HIS
189
n
192
HIS
189
L
ASN
190
n
193
ASN
190
L
SER
191
n
194
SER
191
L
TYR
192
n
195
TYR
192
L
THR
193
n
196
THR
193
L
CYS
194
n
197
CYS
194
L
GLU
195
n
198
GLU
195
L
ALA
196
n
199
ALA
196
L
THR
197
n
200
THR
197
L
HIS
198
n
201
HIS
198
L
LYS
199
n
202
LYS
199
L
THR
200
n
203
THR
200
L
SER
201
n
204
SER
201
L
THR
202
n
205
THR
202
L
SER
203
n
206
SER
203
L
PRO
204
n
207
PRO
204
L
ILE
205
n
208
ILE
205
L
VAL
206
n
209
VAL
206
L
LYS
207
n
210
LYS
207
L
SER
208
n
211
SER
208
L
PHE
209
n
212
PHE
209
L
ASN
210
n
213
ASN
210
L
ARG
211
n
214
ARG
211
L
ASN
212
n
215
ASN
212
L
GLU
213
n
216
GLU
213
L
CYS
214
n
217
CYS
214
L
VAL
2
n
1
VAL
2
H
HIS
3
n
2
HIS
3
H
LEU
4
n
3
LEU
4
H
VAL
5
n
4
VAL
5
H
GLN
6
n
5
GLN
6
H
SER
7
n
6
SER
7
H
GLY
8
n
7
GLY
8
H
PRO
9
n
8
PRO
9
H
GLY
10
n
9
GLY
10
H
LEU
11
n
10
LEU
11
H
VAL
12
n
11
VAL
12
H
ALA
13
n
12
ALA
13
H
PRO
14
n
13
PRO
14
H
SER
15
n
14
SER
15
H
GLN
16
n
15
GLN
16
H
SER
17
n
16
SER
17
H
LEU
18
n
17
LEU
18
H
SER
19
n
18
SER
19
H
ILE
20
n
19
ILE
20
H
THR
21
n
20
THR
21
H
CYS
22
n
21
CYS
22
H
THR
23
n
22
THR
23
H
VAL
24
n
23
VAL
24
H
SER
25
n
24
SER
25
H
GLY
26
n
25
GLY
26
H
PHE
27
n
26
PHE
27
H
SER
28
n
27
SER
28
H
LEU
29
n
28
LEU
29
H
THR
30
n
29
THR
30
H
THR
31
n
30
THR
31
H
TYR
32
n
31
TYR
32
H
GLY
33
n
32
GLY
33
H
VAL
34
n
33
VAL
34
H
HIS
35
n
34
HIS
35
H
TRP
36
n
35
TRP
36
H
PHE
37
n
36
PHE
37
H
ARG
38
n
37
ARG
38
H
GLN
39
n
38
GLN
39
H
PRO
40
n
39
PRO
40
H
PRO
41
n
40
PRO
41
H
GLY
42
n
41
GLY
42
H
LYS
43
n
42
LYS
43
H
GLY
44
n
43
GLY
44
H
LEU
45
n
44
LEU
45
H
GLU
46
n
45
GLU
46
H
TRP
47
n
46
TRP
47
H
LEU
48
n
47
LEU
48
H
GLY
49
n
48
GLY
49
H
LEU
50
n
49
LEU
50
H
ILE
51
n
50
ILE
51
H
TRP
52
n
51
TRP
52
H
ALA
53
n
52
ALA
53
H
GLY
54
n
53
GLY
54
H
GLY
55
n
54
GLY
55
H
ASN
56
n
55
ASN
56
H
THR
57
n
56
THR
57
H
ASP
58
n
57
ASP
58
H
TYR
59
n
58
TYR
59
H
ASN
60
n
59
ASN
60
H
SER
61
n
60
SER
61
H
ALA
62
n
61
ALA
62
H
LEU
63
n
62
LEU
63
H
MET
64
n
63
MET
64
H
SER
65
n
64
SER
65
H
ARG
66
n
65
ARG
66
H
LEU
67
n
66
LEU
67
H
SER
68
n
67
SER
68
H
ILE
69
n
68
ILE
69
H
ASN
70
n
69
ASN
70
H
LYS
71
n
70
LYS
71
H
ASP
72
n
71
ASP
72
H
ASN
73
n
72
ASN
73
H
SER
74
n
73
SER
74
H
LYS
75
n
74
LYS
75
H
SER
76
n
75
SER
76
H
GLN
77
n
76
GLN
77
H
VAL
78
n
77
VAL
78
H
PHE
79
n
78
PHE
79
H
LEU
80
n
79
LEU
80
H
LYS
81
n
80
LYS
81
H
MET
82
n
81
MET
82
H
ASN
82
n
82
A
ASN
82
H
SER
82
n
83
B
SER
82
H
LEU
82
n
84
C
LEU
82
H
GLN
83
n
85
GLN
83
H
ALA
84
n
86
ALA
84
H
ASP
85
n
87
ASP
85
H
ASP
86
n
88
ASP
86
H
THR
87
n
89
THR
87
H
ALA
88
n
90
ALA
88
H
MET
89
n
91
MET
89
H
TYR
90
n
92
TYR
90
H
TYR
91
n
93
TYR
91
H
CYS
92
n
94
CYS
92
H
ALA
93
n
95
ALA
93
H
ARG
94
n
96
ARG
94
H
PHE
95
n
97
PHE
95
H
ARG
96
n
98
ARG
96
H
PHE
97
n
99
PHE
97
H
ALA
98
n
100
ALA
98
H
SER
99
n
101
SER
99
H
TYR
100
n
102
TYR
100
H
TYR
100
n
103
A
TYR
100
H
ASP
100
n
104
B
ASP
100
H
TYR
100
n
105
C
TYR
100
H
ALA
100
n
106
D
ALA
100
H
VAL
100
n
107
E
VAL
100
H
ASP
101
n
108
ASP
101
H
TYR
102
n
109
TYR
102
H
TRP
103
n
110
TRP
103
H
GLY
104
n
111
GLY
104
H
GLN
105
n
112
GLN
105
H
GLY
106
n
113
GLY
106
H
THR
107
n
114
THR
107
H
SER
108
n
115
SER
108
H
VAL
109
n
116
VAL
109
H
THR
110
n
117
THR
110
H
VAL
111
n
118
VAL
111
H
SER
112
n
119
SER
112
H
SER
113
n
120
SER
113
H
ALA
114
n
121
ALA
114
H
LYS
115
n
122
LYS
115
H
THR
116
n
123
THR
116
H
THR
117
n
124
THR
117
H
PRO
118
n
125
PRO
118
H
PRO
119
n
126
PRO
119
H
SER
120
n
127
SER
120
H
VAL
121
n
128
VAL
121
H
TYR
122
n
129
TYR
122
H
PRO
123
n
130
PRO
123
H
LEU
124
n
131
LEU
124
H
ALA
125
n
132
ALA
125
H
PRO
126
n
133
PRO
126
H
GLY
127
n
134
GLY
127
H
CYS
128
n
135
CYS
128
H
GLY
129
n
136
GLY
129
H
ASP
130
n
137
ASP
130
H
THR
133
n
138
THR
133
H
THR
134
n
139
THR
134
H
GLY
135
n
140
GLY
135
H
SER
136
n
141
SER
136
H
SER
137
n
142
SER
137
H
VAL
138
n
143
VAL
138
H
THR
139
n
144
THR
139
H
SER
140
n
145
SER
140
H
GLY
141
n
146
GLY
141
H
CYS
142
n
147
CYS
142
H
LEU
143
n
148
LEU
143
H
VAL
144
n
149
VAL
144
H
LYS
145
n
150
LYS
145
H
GLY
146
n
151
GLY
146
H
TYR
147
n
152
TYR
147
H
PHE
148
n
153
PHE
148
H
PRO
149
n
154
PRO
149
H
GLU
150
n
155
GLU
150
H
PRO
151
n
156
PRO
151
H
VAL
152
n
157
VAL
152
H
THR
153
n
158
THR
153
H
VAL
154
n
159
VAL
154
H
THR
156
n
160
THR
156
H
TRP
157
n
161
TRP
157
H
ASN
162
n
162
ASN
162
H
SER
163
n
163
SER
163
H
GLY
164
n
164
GLY
164
H
SER
165
n
165
SER
165
H
LEU
166
n
166
LEU
166
H
SER
167
n
167
SER
167
H
SER
168
n
168
SER
168
H
SER
169
n
169
SER
169
H
VAL
171
n
170
VAL
171
H
HIS
172
n
171
HIS
172
H
THR
173
n
172
THR
173
H
PHE
174
n
173
PHE
174
H
PRO
175
n
174
PRO
175
H
ALA
176
n
175
ALA
176
H
LEU
177
n
176
LEU
177
H
LEU
178
n
177
LEU
178
H
GLN
179
n
178
GLN
179
H
SER
180
n
179
SER
180
H
GLY
183
n
180
GLY
183
H
LEU
184
n
181
LEU
184
H
TYR
185
n
182
TYR
185
H
THR
186
n
183
THR
186
H
MET
187
n
184
MET
187
H
SER
188
n
185
SER
188
H
SER
189
n
186
SER
189
H
SER
190
n
187
SER
190
H
VAL
191
n
188
VAL
191
H
THR
192
n
189
THR
192
H
VAL
193
n
190
VAL
193
H
PRO
194
n
191
PRO
194
H
SER
195
n
192
SER
195
H
SER
196
n
193
SER
196
H
THR
198
n
194
THR
198
H
TRP
199
n
195
TRP
199
H
PRO
200
n
196
PRO
200
H
SER
202
n
197
SER
202
H
GLN
203
n
198
GLN
203
H
THR
204
n
199
THR
204
H
VAL
205
n
200
VAL
205
H
THR
206
n
201
THR
206
H
CYS
208
n
202
CYS
208
H
SER
209
n
203
SER
209
H
VAL
210
n
204
VAL
210
H
ALA
211
n
205
ALA
211
H
HIS
212
n
206
HIS
212
H
PRO
213
n
207
PRO
213
H
ALA
214
n
208
ALA
214
H
SER
215
n
209
SER
215
H
SER
216
n
210
SER
216
H
THR
217
n
211
THR
217
H
THR
218
n
212
THR
218
H
VAL
219
n
213
VAL
219
H
ASP
220
n
214
ASP
220
H
LYS
221
n
215
LYS
221
H
LYS
222
n
216
LYS
222
H
LEU
223
n
217
LEU
223
H
author_and_software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
4700
-34
18810
11380
-83
35630
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
L
O
THR
5
A
O
THR
4
L
N
ARG
24
A
N
ARG
23
L
O
ALA
19
A
O
ALA
18
L
N
ILE
75
A
N
ILE
78
L
O
ASP
70
A
O
ASP
73
L
N
SER
67
A
N
SER
70
L
O
LEU
11
A
O
LEU
10
L
N
GLU
103
A
N
GLU
106
L
O
THR
85
A
O
THR
88
L
N
GLN
38
A
N
GLN
41
L
O
TRP
35
A
O
TRP
38
L
N
ILE
48
A
N
ILE
51
L
O
THR
114
A
O
THR
117
L
N
ASN
137
A
N
ASN
140
L
O
ALA
130
A
O
ALA
133
L
N
LEU
181
A
N
LEU
184
L
O
SER
176
A
O
SER
179
L
N
SER
162
A
N
SER
165
L
O
ASN
145
A
O
ASN
148
L
N
THR
197
A
N
THR
200
L
O
TYR
192
A
O
TYR
195
L
N
PHE
209
A
N
PHE
212
H
O
VAL
5
B
O
VAL
4
H
N
THR
23
B
N
THR
22
H
O
LEU
18
B
O
LEU
17
H
N
MET
82
B
N
MET
81
H
O
GLN
77
B
O
GLN
76
H
N
ASP
72
B
N
ASP
71
H
O
GLY
10
B
O
GLY
9
H
N
THR
110
B
N
THR
117
H
O
THR
107
B
O
THR
114
H
N
TYR
90
B
N
TYR
92
H
O
MET
89
B
O
MET
91
H
N
GLN
39
B
N
GLN
38
H
O
VAL
34
B
O
VAL
33
H
N
ILE
51
B
N
ILE
50
H
O
LEU
50
B
O
LEU
49
H
N
ASP
58
B
N
ASP
57
H
O
SER
120
B
O
SER
127
H
N
LYS
145
B
N
LYS
150
H
O
VAL
138
B
O
VAL
143
H
N
VAL
193
B
N
VAL
190
H
O
SER
188
B
O
SER
185
H
N
PHE
174
B
N
PHE
173
H
O
THR
153
B
O
THR
158
H
N
ALA
211
B
N
ALA
205
H
O
CYS
208
B
O
CYS
202
H
N
LYS
221
B
N
LYS
215
H
N
ARG
94
B
N
ARG
96
H
O
TYR
102
B
O
TYR
109
1
L
CB
GLU
154
A
CB
GLU
157
0
Y
1
L
CG
GLU
154
A
CG
GLU
157
0
Y
1
L
CD
GLU
154
A
CD
GLU
157
0
Y
1
L
OE1
GLU
154
A
OE1
GLU
157
0
Y
1
L
OE2
GLU
154
A
OE2
GLU
157
0
Y
1
L
ILE
2
A
ILE
1
0
Y
1
H
ALA
125
B
ALA
132
0
Y
1
H
PRO
126
B
PRO
133
0
Y
1
H
GLY
127
B
GLY
134
0
Y
1
H
CYS
128
B
CYS
135
0
Y
1
H
GLY
129
B
GLY
136
0
Y
1
H
ASP
130
B
ASP
137
0
Y
1
H
THR
133
B
THR
138
0
Y
1
H
THR
134
B
THR
139
0
Y
1
H
GLY
135
B
GLY
140
0
Y
1
H
SER
136
B
SER
141
0
Y
1
H
SER
137
B
SER
142
0
Y
1
H
VAL
138
B
VAL
143
0
Y
1
H
THR
139
B
THR
144
0
Y
1
H
H
GLY
PRO
8
9
-123.70
1
H
H
TRP
PRO
199
200
-144.69
1
L
TYR
86
0.070
SIDE CHAIN
1
16.26
2.20
113.40
129.66
L
L
L
CA
CB
CG
GLU
GLU
GLU
81
81
81
N
1
13.82
2.20
113.40
127.22
L
L
L
CA
CB
CG
GLU
GLU
GLU
93
93
93
N
1
-13.26
2.20
117.20
103.94
L
L
L
CA
C
N
PRO
PRO
LEU
95
95
96
Y
1
10.72
1.60
122.70
133.42
L
L
L
O
C
N
PRO
PRO
LEU
95
95
96
Y
1
-9.77
1.60
110.90
101.13
L
L
L
CG1
CB
CG2
VAL
VAL
VAL
133
133
133
N
1
15.76
2.20
113.40
129.16
L
L
L
CA
CB
CG
GLU
GLU
GLU
185
185
185
N
1
13.44
2.20
113.40
126.84
L
L
L
CA
CB
CG
GLU
GLU
GLU
195
195
195
N
1
-17.03
2.70
111.00
93.97
H
H
H
N
CA
C
ALA
ALA
ALA
62
62
62
N
1
15.51
2.30
115.30
130.81
H
H
H
CA
CB
CG
LEU
LEU
LEU
67
67
67
N
1
-10.27
1.70
113.30
103.03
H
H
H
CA
CB
CG
MET
MET
MET
82
82
82
N
1
10.70
1.10
114.20
124.90
H
H
H
CA
CB
SG
CYS
CYS
CYS
92
92
92
N
1
-3.77
0.50
120.30
116.53
H
H
H
NE
CZ
NH2
ARG
ARG
ARG
96
96
96
N
1
L
CYS
23
-166.92
117.95
B
1
L
VAL
27
-79.32
34.86
1
L
SER
28
61.53
-134.14
1
L
PRO
40
-17.55
-61.14
1
L
ALA
51
58.99
-31.71
1
L
ALA
60
-69.30
12.60
1
L
ALA
83
-67.25
89.09
1
L
SER
91
-144.20
34.36
1
L
PRO
119
-57.21
170.07
1
L
ASN
138
67.99
61.61
1
L
PRO
141
-69.18
-171.49
1
L
ASP
151
72.72
-47.83
1
L
LYS
169
-97.61
-60.21
1
L
SER
171
-86.31
42.81
1
L
ASP
184
-67.73
15.79
1
L
GLU
185
-151.01
-30.81
1
L
GLU
187
-39.63
-27.97
1
L
LYS
199
-7.37
-40.84
1
L
ARG
211
-58.14
107.61
1
L
GLU
213
70.21
32.45
1
H
SER
15
51.78
-20.49
1
H
LYS
43
-104.95
-150.11
1
H
SER
61
-53.66
109.04
1
H
ALA
62
154.34
-91.65
1
H
MET
64
4.42
-66.35
1
H
SER
76
60.30
62.72
B
1
H
SER
82
75.14
51.34
B
1
H
ASP
100
-169.86
103.52
1
H
ASN
162
38.81
59.72
1
H
SER
163
61.08
-5.80
1
H
SER
167
-153.42
61.54
1
H
GLN
179
-110.83
-124.71
1
H
SER
196
167.04
-55.03
1
H
TRP
199
-95.06
-91.11
1
H
THR
204
66.91
110.59
1
H
THR
218
-159.20
84.55
31.4
0.209
0.209
2.7
10.0
9717
1
1.
0.35
2.7
10.0
1
3348
42
0
3305
0.015
3.2
28.5
1.35
1IBG
12688
1
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
IGG FAB (IGG2B, KAPPA) FRAGMENT (40-50 FAB) COMPLEXED WITH OUABAIN
STRUCTURE AND SPECIFICITY OF THE ANTI-DIGOXIN ANTIBODY 40-50
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
L
LEU
50
A
LEU
53
HELX_P
L
SER
52
A
SER
55
5
1
3
L
GLU
80
A
GLU
83
HELX_P
L
ASP
82
A
ASP
85
5
2
3
L
SER
122
A
SER
125
HELX_P
L
SER
127
A
SER
130
1
3
6
L
LYS
183
A
LYS
186
HELX_P
L
ARG
188
A
ARG
191
1
4
6
H
LEU
63
B
LEU
62
HELX_P
H
ARG
66
B
ARG
65
5
5
4
H
ASN
73
B
ASN
72
HELX_P
H
LYS
75
B
LYS
74
5
6
3
H
ALA
84
B
ALA
86
HELX_P
H
ASP
86
B
ASP
88
5
7
3
H
ASN
162
B
ASN
162
HELX_P
H
GLY
164
B
GLY
164
5
8
3
H
PRO
213
B
PRO
207
HELX_P
H
SER
215
B
SER
209
5
9
3
disulf
2.034
L
CYS
23
A
SG
CYS
22
1_555
L
CYS
88
A
SG
CYS
91
1_555
disulf
2.014
L
CYS
134
A
SG
CYS
137
1_555
L
CYS
194
A
SG
CYS
197
1_555
disulf
2.018
H
CYS
22
B
SG
CYS
21
1_555
H
CYS
92
B
SG
CYS
94
1_555
disulf
2.034
H
CYS
142
B
SG
CYS
147
1_555
H
CYS
208
B
SG
CYS
202
1_555
IMMUNE SYSTEM
IMMUNOGLOBULIN, FAB, COMPLEX, IMMUNE SYSTEM
L
SER
7
A
SER
6
1
L
PRO
8
A
PRO
7
-13.06
L
HIS
76
A
HIS
79
1
L
PRO
77
A
PRO
80
-3.93
L
TYR
94
A
TYR
97
1
L
PRO
95
A
PRO
98
-1.53
L
TYR
140
A
TYR
143
1
L
PRO
141
A
PRO
144
-4.08
H
PHE
148
B
PHE
153
1
H
PRO
149
B
PRO
154
-13.91
H
GLU
150
B
GLU
155
1
H
PRO
151
B
PRO
156
22.23
JC5810
PIR
1
1
JC5810
NIVLTQSPASLAVSLGQRATISCRASKSVSASGYIYMHWYQQKPGQPPKLLISLASNLESGVPARFSGSGSGTDFTLNIH
PVEEEDVATYYCQHSRELPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ
NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
1IBG
PDB
2
1IBG
2
218
1IBG
2
214
JC5810
L
1
1
217
2
223
1IBG
2
223
1IBG
H
2
1
217
1
ALA
CONFLICT
THR
27
1IBG
D
L
JC5810
PIR
31
30
1
ILE
CONFLICT
SER
31
1IBG
L
JC5810
PIR
35
34
1
TYR
CONFLICT
HIS
32
1IBG
L
JC5810
PIR
36
35
1
MET
CONFLICT
ILE
33
1IBG
L
JC5810
PIR
37
36
1
SER
CONFLICT
TYR
49
1IBG
L
JC5810
PIR
53
52
1
ASN
CONFLICT
ILE
53
1IBG
L
JC5810
PIR
57
56
1
VAL
CONFLICT
ALA
83
1IBG
L
JC5810
PIR
87
86
1
LEU
CONFLICT
TYR
94
1IBG
L
JC5810
PIR
98
97
1
LYS
CONFLICT
GLU
103
1IBG
L
JC5810
PIR
107
106
4
2
3
4
3
4
6
4
3
2
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
L
LEU
4
A
LEU
3
L
SER
7
A
SER
6
L
ALA
19
A
ALA
18
L
ALA
25
A
ALA
24
L
ASP
70
A
ASP
73
L
ILE
75
A
ILE
78
L
PHE
62
A
PHE
65
L
SER
67
A
SER
70
L
SER
10
A
SER
9
L
SER
14
A
SER
13
L
GLU
103
A
GLU
106
L
LYS
107
A
LYS
110
L
ALA
84
A
ALA
87
L
HIS
90
A
HIS
93
L
ILE
33
A
ILE
36
L
LYS
39
A
LYS
42
L
LYS
45
A
LYS
48
L
TYR
49
A
TYR
52
L
THR
114
A
THR
117
L
PHE
118
A
PHE
121
L
GLY
129
A
GLY
132
L
PHE
139
A
PHE
142
L
TYR
173
A
TYR
176
L
THR
182
A
THR
185
L
VAL
159
A
VAL
162
L
TRP
163
A
TRP
166
L
ASN
145
A
ASN
148
L
ILE
150
A
ILE
153
L
SER
191
A
SER
194
L
THR
197
A
THR
200
L
ILE
205
A
ILE
208
L
ASN
210
A
ASN
213
H
LEU
4
B
LEU
3
H
SER
7
B
SER
6
H
SER
17
B
SER
16
H
VAL
24
B
VAL
23
H
GLN
77
B
GLN
76
H
ASN
82
B
ASN
82
A
H
LEU
67
B
LEU
66
H
ASP
72
B
ASP
71
H
GLY
10
B
GLY
9
H
VAL
12
B
VAL
11
H
THR
107
B
THR
114
H
VAL
111
B
VAL
118
H
ALA
88
B
ALA
90
H
PHE
95
B
PHE
97
H
GLY
33
B
GLY
32
H
GLN
39
B
GLN
38
H
LEU
45
B
LEU
44
H
ILE
51
B
ILE
50
H
THR
57
B
THR
56
H
TYR
59
B
TYR
58
H
SER
120
B
SER
127
H
ALA
125
B
ALA
132
H
SER
137
B
SER
142
H
TYR
147
B
TYR
152
H
TYR
185
B
TYR
182
H
PRO
194
B
PRO
191
H
VAL
171
B
VAL
170
H
PHE
174
B
PHE
173
H
THR
153
B
THR
158
H
TRP
157
B
TRP
161
H
THR
206
B
THR
201
H
HIS
212
B
HIS
206
H
THR
217
B
THR
211
H
LYS
222
B
LYS
216
H
ALA
88
B
ALA
90
H
ARG
94
B
ARG
96
H
TYR
102
B
TYR
109
H
VAL
109
B
VAL
116
BINDING SITE FOR RESIDUE CU L 1
Software
1
BINDING SITE FOR RESIDUE OBN H 1
Software
12
L
HIS
189
A
HIS
192
1
2_555
H
HIS
35
B
HIS
34
12
1_555
H
LEU
50
B
LEU
49
12
1_555
H
PHE
95
B
PHE
97
12
1_555
H
TYR
100
B
TYR
102
12
1_555
H
TYR
100
B
TYR
105
C
12
1_555
H
VAL
100
B
VAL
107
E
12
1_555
L
THR
27
A
THR
30
D
12
1_555
L
HIS
32
A
HIS
35
12
1_555
L
SER
91
A
SER
94
12
1_555
L
ARG
92
A
ARG
95
12
1_555
L
TYR
94
A
TYR
97
12
1_555
L
LEU
96
A
LEU
99
12
1_555
5
C 1 2 1