1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Han, X.
Bushweller, J.H.
Cafiso, D.S.
Tamm, L.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
8
715
720
10.1038/90434
11473264
Membrane structure and fusion-triggering conformational change of the fusion domain from influenza hemagglutinin.
2001
10.2210/pdb1ibn/pdb
pdb_00001ibn
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
2054.284
HEMAGGLUTININ HA2 CHAIN PEPTIDE
RESIDUES 1 TO 20 OF N-TERMINUS OF HA2 SUBUNIT
1
syn
polymer
no
no
GLFGAIAGFIENGWEGMIDG
GLFGAIAGFIENGWEGMIDG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2001-08-08
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
NMR Structure of Hemagglutinin fusion peptide in DPC micelles at pH 7.4
RCSB
Y
RCSB
2001-03-28
REL
The sequence of the peptide is naturally found in INFLUENZA VIRUS strain X31.
sample
This structure was determined using standard 2D homonuclear techniques.
The submitted conformer models are the 20 structures with the lowest energy
20
20
DQF-COSY
2D-NOESY
TOCSY
0.02
5
ambient
303
K
the structures are based on a total of 408 restraints, 156 are NOE-derived distance constraints, 53 dihedral angle restraints.
torsion angle dynamics
1
closest to the average
2 mM peptide in the presence of 200 mM d38-DPC in 0.05% NaN3, 5 mM DTT, 20 mM d4-acetic acid, pH 5
95% H2O/5% D2O
Guntert
structure solution
DYANA
1.5
Luginbulh
refinement
OPAL
2.6
500
Varian
UNITYPLUS
600
Varian
UNITYPLUS
GLY
1
n
1
GLY
1
A
LEU
2
n
2
LEU
2
A
PHE
3
n
3
PHE
3
A
GLY
4
n
4
GLY
4
A
ALA
5
n
5
ALA
5
A
ILE
6
n
6
ILE
6
A
ALA
7
n
7
ALA
7
A
GLY
8
n
8
GLY
8
A
PHE
9
n
9
PHE
9
A
ILE
10
n
10
ILE
10
A
GLU
11
n
11
GLU
11
A
ASN
12
n
12
ASN
12
A
GLY
13
n
13
GLY
13
A
TRP
14
n
14
TRP
14
A
GLU
15
n
15
GLU
15
A
GLY
16
n
16
GLY
16
A
MET
17
n
17
MET
17
A
ILE
18
n
18
ILE
18
A
ASP
19
n
19
ASP
19
A
GLY
20
n
20
GLY
20
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ASN
12
-151.84
72.20
3
A
ASN
12
-145.11
-15.90
3
A
ASP
19
43.20
-105.95
5
A
ASN
12
-150.07
66.50
6
A
TRP
14
-38.56
-39.60
6
A
ASP
19
50.16
88.12
7
A
ASN
12
-146.04
-15.94
8
A
ASN
12
-155.48
71.79
9
A
ASN
12
-150.51
70.83
10
A
ASN
12
-151.81
66.54
11
A
TRP
14
-35.44
-39.14
12
A
ASN
12
-145.49
-15.86
17
A
ASN
12
-140.19
-15.93
18
A
ASP
19
30.91
75.54
19
A
ASN
12
-89.78
33.49
19
A
ASP
19
35.17
54.69
20
A
ASN
12
-146.25
-15.98
NMR STRUCTURE OF HEMAGGLUTININ FUSION PEPTIDE IN DPC MICELLES AT PH 5
1
N
N
A
GLY
1
A
GLY
1
HELX_P
A
GLU
11
A
GLU
11
1
1
11
A
TRP
14
A
TRP
14
HELX_P
A
ASP
19
A
ASP
19
1
2
6
VIRAL PROTEIN
helix-kink-helix, Viral protein
HEMA_IADU3
UNP
1
346
P03442
GLFGAIAGFIENGWEGMIDG
346
365
1IBN
1
20
P03442
A
1
1
20