0.011364
0.000000
0.003979
0.000000
0.023697
0.000000
0.000000
0.000000
0.011393
0.00000
0.00000
0.00000
Casasnovas, J.M.
Stehle, T.
Liu, J.-H.
Wang, J.-H.
Springer, T.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
109.30
90.00
88.000
42.200
93.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
95
4134
4139
10.1073/pnas.95.8.4134
9539702
A dimeric crystal structure for the N-terminal two domains of intercellular adhesion molecule-1.
1998
10.2210/pdb1ic1/pdb
pdb_00001ic1
THR A 190 HAS WRONG CHIRALITY AT ATOM CA
NAG D 1 HAS WRONG CHIRALITY AT ATOM C1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
113
1
IMAGE PLATE
1996-09
MARRESEARCH
M
x-ray
1
1.5418
1.0
1.5418
20919.848
INTERCELLULAR ADHESION MOLECULE-1
N-TERMINAL 190 RESIDUE DOMAIN
2
man
polymer
424.401
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
3
man
branched
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
5
man
non-polymer
18.015
water
43
nat
water
ICAM-1
no
no
QTSVSPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFL
TVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCR
TELDLRPQGLELFENTSAPYQLQTFVLPAT
QTSVSPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFL
TVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCR
TELDLRPQGLELFENTSAPYQLQTFVLPAT
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Chinese hamster
Cricetulus
sample
IC1-P191*
9606
Homo sapiens
CHO
EXTRACELLULAR
10029
Cricetulus griseus
GLUTAMINE SYNTHETASE
PBJ5-GS
1
3.89
60.
6.5
17% PEG 4000, NA CACODYLATE, PH 6.5, AND 100 MM B-OCTYL-GLUCOPYRANOSIDE.
atom_site
chem_comp
database_PDB_caveat
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_validate_chiral
struct_asym
struct_conn
struct_site
struct_site_gen
chem_comp
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Advisory
Atomic model
Data collection
Derived calculations
Non-polymer description
Structure summary
Database references
Refinement description
Structure summary
1
0
1998-06-17
1
1
2008-03-24
1
2
2011-07-13
2
0
2020-07-29
2
1
2023-08-09
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.type
_pdbx_struct_assembly_gen.asym_id_list
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
A
NAG
314
n
C
NAG
1
A
NAG
324
n
C
NAG
2
B
NAG
313
n
D
NAG
1
B
NAG
323
n
D
NAG
2
B
NAG
314
n
E
NAG
1
B
NAG
324
n
E
NAG
2
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
Y
BNL
1998-03-09
REL
REL
oligosaccharide
DGlcpNAcb1-4DGlcpNAcb1-
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1
2
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}
2
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
2
O1
HO4
sing
n
n
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
HOH
water
1ZXQ
PDB ENTRIES 1ZXQ AND 1VSC
PDB
experimental model
1VSC
PDB ENTRIES 1ZXQ AND 1VSC
PDB
experimental model
NAG
311
3
NAG
NAG
311
A
NAG
312
3
NAG
NAG
312
A
NAG
313
3
NAG
NAG
313
A
NAG
311
3
NAG
NAG
311
B
NAG
312
3
NAG
NAG
312
B
HOH
401
4
HOH
HOH
401
A
HOH
402
4
HOH
HOH
402
A
HOH
403
4
HOH
HOH
403
A
HOH
404
4
HOH
HOH
404
A
HOH
406
4
HOH
HOH
406
A
HOH
407
4
HOH
HOH
407
A
HOH
408
4
HOH
HOH
408
A
HOH
410
4
HOH
HOH
410
A
HOH
411
4
HOH
HOH
411
A
HOH
412
4
HOH
HOH
412
A
HOH
413
4
HOH
HOH
413
A
HOH
414
4
HOH
HOH
414
A
HOH
415
4
HOH
HOH
415
A
HOH
416
4
HOH
HOH
416
A
HOH
418
4
HOH
HOH
418
A
HOH
419
4
HOH
HOH
419
A
HOH
421
4
HOH
HOH
421
A
HOH
423
4
HOH
HOH
423
A
HOH
424
4
HOH
HOH
424
A
HOH
425
4
HOH
HOH
425
A
HOH
426
4
HOH
HOH
426
A
HOH
427
4
HOH
HOH
427
A
HOH
428
4
HOH
HOH
428
A
HOH
431
4
HOH
HOH
431
A
HOH
432
4
HOH
HOH
432
A
HOH
435
4
HOH
HOH
435
A
HOH
438
4
HOH
HOH
438
A
HOH
440
4
HOH
HOH
440
A
HOH
443
4
HOH
HOH
443
A
HOH
405
4
HOH
HOH
405
B
HOH
409
4
HOH
HOH
409
B
HOH
417
4
HOH
HOH
417
B
HOH
420
4
HOH
HOH
420
B
HOH
422
4
HOH
HOH
422
B
HOH
429
4
HOH
HOH
429
B
HOH
430
4
HOH
HOH
430
B
HOH
433
4
HOH
HOH
433
B
HOH
434
4
HOH
HOH
434
B
HOH
436
4
HOH
HOH
436
B
HOH
437
4
HOH
HOH
437
B
HOH
439
4
HOH
HOH
439
B
HOH
441
4
HOH
HOH
441
B
HOH
442
4
HOH
HOH
442
B
GLN
1
n
1
GLN
1
A
THR
2
n
2
THR
2
A
SER
3
n
3
SER
3
A
VAL
4
n
4
VAL
4
A
SER
5
n
5
SER
5
A
PRO
6
n
6
PRO
6
A
SER
7
n
7
SER
7
A
LYS
8
n
8
LYS
8
A
VAL
9
n
9
VAL
9
A
ILE
10
n
10
ILE
10
A
LEU
11
n
11
LEU
11
A
PRO
12
n
12
PRO
12
A
ARG
13
n
13
ARG
13
A
GLY
14
n
14
GLY
14
A
GLY
15
n
15
GLY
15
A
SER
16
n
16
SER
16
A
VAL
17
n
17
VAL
17
A
LEU
18
n
18
LEU
18
A
VAL
19
n
19
VAL
19
A
THR
20
n
20
THR
20
A
CYS
21
n
21
CYS
21
A
SER
22
n
22
SER
22
A
THR
23
n
23
THR
23
A
SER
24
n
24
SER
24
A
CYS
25
n
25
CYS
25
A
ASP
26
n
26
ASP
26
A
GLN
27
n
27
GLN
27
A
PRO
28
n
28
PRO
28
A
LYS
29
n
29
LYS
29
A
LEU
30
n
30
LEU
30
A
LEU
31
n
31
LEU
31
A
GLY
32
n
32
GLY
32
A
ILE
33
n
33
ILE
33
A
GLU
34
n
34
GLU
34
A
THR
35
n
35
THR
35
A
PRO
36
n
36
PRO
36
A
LEU
37
n
37
LEU
37
A
PRO
38
n
38
PRO
38
A
LYS
39
n
39
LYS
39
A
LYS
40
n
40
LYS
40
A
GLU
41
n
41
GLU
41
A
LEU
42
n
42
LEU
42
A
LEU
43
n
43
LEU
43
A
LEU
44
n
44
LEU
44
A
PRO
45
n
45
PRO
45
A
GLY
46
n
46
GLY
46
A
ASN
47
n
47
ASN
47
A
ASN
48
n
48
ASN
48
A
ARG
49
n
49
ARG
49
A
LYS
50
n
50
LYS
50
A
VAL
51
n
51
VAL
51
A
TYR
52
n
52
TYR
52
A
GLU
53
n
53
GLU
53
A
LEU
54
n
54
LEU
54
A
SER
55
n
55
SER
55
A
ASN
56
n
56
ASN
56
A
VAL
57
n
57
VAL
57
A
GLN
58
n
58
GLN
58
A
GLU
59
n
59
GLU
59
A
ASP
60
n
60
ASP
60
A
SER
61
n
61
SER
61
A
GLN
62
n
62
GLN
62
A
PRO
63
n
63
PRO
63
A
MET
64
n
64
MET
64
A
CYS
65
n
65
CYS
65
A
TYR
66
n
66
TYR
66
A
SER
67
n
67
SER
67
A
ASN
68
n
68
ASN
68
A
CYS
69
n
69
CYS
69
A
PRO
70
n
70
PRO
70
A
ASP
71
n
71
ASP
71
A
GLY
72
n
72
GLY
72
A
GLN
73
n
73
GLN
73
A
SER
74
n
74
SER
74
A
THR
75
n
75
THR
75
A
ALA
76
n
76
ALA
76
A
LYS
77
n
77
LYS
77
A
THR
78
n
78
THR
78
A
PHE
79
n
79
PHE
79
A
LEU
80
n
80
LEU
80
A
THR
81
n
81
THR
81
A
VAL
82
n
82
VAL
82
A
TYR
83
n
83
TYR
83
A
TRP
84
n
84
TRP
84
A
THR
85
n
85
THR
85
A
PRO
86
n
86
PRO
86
A
GLU
87
n
87
GLU
87
A
ARG
88
n
88
ARG
88
A
VAL
89
n
89
VAL
89
A
GLU
90
n
90
GLU
90
A
LEU
91
n
91
LEU
91
A
ALA
92
n
92
ALA
92
A
PRO
93
n
93
PRO
93
A
LEU
94
n
94
LEU
94
A
PRO
95
n
95
PRO
95
A
SER
96
n
96
SER
96
A
TRP
97
n
97
TRP
97
A
GLN
98
n
98
GLN
98
A
PRO
99
n
99
PRO
99
A
VAL
100
n
100
VAL
100
A
GLY
101
n
101
GLY
101
A
LYS
102
n
102
LYS
102
A
ASN
103
n
103
ASN
103
A
LEU
104
n
104
LEU
104
A
THR
105
n
105
THR
105
A
LEU
106
n
106
LEU
106
A
ARG
107
n
107
ARG
107
A
CYS
108
n
108
CYS
108
A
GLN
109
n
109
GLN
109
A
VAL
110
n
110
VAL
110
A
GLU
111
n
111
GLU
111
A
GLY
112
n
112
GLY
112
A
GLY
113
n
113
GLY
113
A
ALA
114
n
114
ALA
114
A
PRO
115
n
115
PRO
115
A
ARG
116
n
116
ARG
116
A
ALA
117
n
117
ALA
117
A
ASN
118
n
118
ASN
118
A
LEU
119
n
119
LEU
119
A
THR
120
n
120
THR
120
A
VAL
121
n
121
VAL
121
A
VAL
122
n
122
VAL
122
A
LEU
123
n
123
LEU
123
A
LEU
124
n
124
LEU
124
A
ARG
125
n
125
ARG
125
A
GLY
126
n
126
GLY
126
A
GLU
127
n
127
GLU
127
A
LYS
128
n
128
LYS
128
A
GLU
129
n
129
GLU
129
A
LEU
130
n
130
LEU
130
A
LYS
131
n
131
LYS
131
A
ARG
132
n
132
ARG
132
A
GLU
133
n
133
GLU
133
A
PRO
134
n
134
PRO
134
A
ALA
135
n
135
ALA
135
A
VAL
136
n
136
VAL
136
A
GLY
137
n
137
GLY
137
A
GLU
138
n
138
GLU
138
A
PRO
139
n
139
PRO
139
A
ALA
140
n
140
ALA
140
A
GLU
141
n
141
GLU
141
A
VAL
142
n
142
VAL
142
A
THR
143
n
143
THR
143
A
THR
144
n
144
THR
144
A
THR
145
n
145
THR
145
A
VAL
146
n
146
VAL
146
A
LEU
147
n
147
LEU
147
A
VAL
148
n
148
VAL
148
A
ARG
149
n
149
ARG
149
A
ARG
150
n
150
ARG
150
A
ASP
151
n
151
ASP
151
A
HIS
152
n
152
HIS
152
A
HIS
153
n
153
HIS
153
A
GLY
154
n
154
GLY
154
A
ALA
155
n
155
ALA
155
A
ASN
156
n
156
ASN
156
A
PHE
157
n
157
PHE
157
A
SER
158
n
158
SER
158
A
CYS
159
n
159
CYS
159
A
ARG
160
n
160
ARG
160
A
THR
161
n
161
THR
161
A
GLU
162
n
162
GLU
162
A
LEU
163
n
163
LEU
163
A
ASP
164
n
164
ASP
164
A
LEU
165
n
165
LEU
165
A
ARG
166
n
166
ARG
166
A
PRO
167
n
167
PRO
167
A
GLN
168
n
168
GLN
168
A
GLY
169
n
169
GLY
169
A
LEU
170
n
170
LEU
170
A
GLU
171
n
171
GLU
171
A
LEU
172
n
172
LEU
172
A
PHE
173
n
173
PHE
173
A
GLU
174
n
174
GLU
174
A
ASN
175
n
175
ASN
175
A
THR
176
n
176
THR
176
A
SER
177
n
177
SER
177
A
ALA
178
n
178
ALA
178
A
PRO
179
n
179
PRO
179
A
TYR
180
n
180
TYR
180
A
GLN
181
n
181
GLN
181
A
LEU
182
n
182
LEU
182
A
GLN
183
n
183
GLN
183
A
THR
184
n
184
THR
184
A
PHE
185
n
185
PHE
185
A
VAL
186
n
186
VAL
186
A
LEU
187
n
187
LEU
187
A
PRO
188
n
188
PRO
188
A
ALA
189
n
189
ALA
189
A
THR
190
n
190
THR
190
A
GLN
1
n
1
GLN
1
B
THR
2
n
2
THR
2
B
SER
3
n
3
SER
3
B
VAL
4
n
4
VAL
4
B
SER
5
n
5
SER
5
B
PRO
6
n
6
PRO
6
B
SER
7
n
7
SER
7
B
LYS
8
n
8
LYS
8
B
VAL
9
n
9
VAL
9
B
ILE
10
n
10
ILE
10
B
LEU
11
n
11
LEU
11
B
PRO
12
n
12
PRO
12
B
ARG
13
n
13
ARG
13
B
GLY
14
n
14
GLY
14
B
GLY
15
n
15
GLY
15
B
SER
16
n
16
SER
16
B
VAL
17
n
17
VAL
17
B
LEU
18
n
18
LEU
18
B
VAL
19
n
19
VAL
19
B
THR
20
n
20
THR
20
B
CYS
21
n
21
CYS
21
B
SER
22
n
22
SER
22
B
THR
23
n
23
THR
23
B
SER
24
n
24
SER
24
B
CYS
25
n
25
CYS
25
B
ASP
26
n
26
ASP
26
B
GLN
27
n
27
GLN
27
B
PRO
28
n
28
PRO
28
B
LYS
29
n
29
LYS
29
B
LEU
30
n
30
LEU
30
B
LEU
31
n
31
LEU
31
B
GLY
32
n
32
GLY
32
B
ILE
33
n
33
ILE
33
B
GLU
34
n
34
GLU
34
B
THR
35
n
35
THR
35
B
PRO
36
n
36
PRO
36
B
LEU
37
n
37
LEU
37
B
PRO
38
n
38
PRO
38
B
LYS
39
n
39
LYS
39
B
LYS
40
n
40
LYS
40
B
GLU
41
n
41
GLU
41
B
LEU
42
n
42
LEU
42
B
LEU
43
n
43
LEU
43
B
LEU
44
n
44
LEU
44
B
PRO
45
n
45
PRO
45
B
GLY
46
n
46
GLY
46
B
ASN
47
n
47
ASN
47
B
ASN
48
n
48
ASN
48
B
ARG
49
n
49
ARG
49
B
LYS
50
n
50
LYS
50
B
VAL
51
n
51
VAL
51
B
TYR
52
n
52
TYR
52
B
GLU
53
n
53
GLU
53
B
LEU
54
n
54
LEU
54
B
SER
55
n
55
SER
55
B
ASN
56
n
56
ASN
56
B
VAL
57
n
57
VAL
57
B
GLN
58
n
58
GLN
58
B
GLU
59
n
59
GLU
59
B
ASP
60
n
60
ASP
60
B
SER
61
n
61
SER
61
B
GLN
62
n
62
GLN
62
B
PRO
63
n
63
PRO
63
B
MET
64
n
64
MET
64
B
CYS
65
n
65
CYS
65
B
TYR
66
n
66
TYR
66
B
SER
67
n
67
SER
67
B
ASN
68
n
68
ASN
68
B
CYS
69
n
69
CYS
69
B
PRO
70
n
70
PRO
70
B
ASP
71
n
71
ASP
71
B
GLY
72
n
72
GLY
72
B
GLN
73
n
73
GLN
73
B
SER
74
n
74
SER
74
B
THR
75
n
75
THR
75
B
ALA
76
n
76
ALA
76
B
LYS
77
n
77
LYS
77
B
THR
78
n
78
THR
78
B
PHE
79
n
79
PHE
79
B
LEU
80
n
80
LEU
80
B
THR
81
n
81
THR
81
B
VAL
82
n
82
VAL
82
B
TYR
83
n
83
TYR
83
B
TRP
84
n
84
TRP
84
B
THR
85
n
85
THR
85
B
PRO
86
n
86
PRO
86
B
GLU
87
n
87
GLU
87
B
ARG
88
n
88
ARG
88
B
VAL
89
n
89
VAL
89
B
GLU
90
n
90
GLU
90
B
LEU
91
n
91
LEU
91
B
ALA
92
n
92
ALA
92
B
PRO
93
n
93
PRO
93
B
LEU
94
n
94
LEU
94
B
PRO
95
n
95
PRO
95
B
SER
96
n
96
SER
96
B
TRP
97
n
97
TRP
97
B
GLN
98
n
98
GLN
98
B
PRO
99
n
99
PRO
99
B
VAL
100
n
100
VAL
100
B
GLY
101
n
101
GLY
101
B
LYS
102
n
102
LYS
102
B
ASN
103
n
103
ASN
103
B
LEU
104
n
104
LEU
104
B
THR
105
n
105
THR
105
B
LEU
106
n
106
LEU
106
B
ARG
107
n
107
ARG
107
B
CYS
108
n
108
CYS
108
B
GLN
109
n
109
GLN
109
B
VAL
110
n
110
VAL
110
B
GLU
111
n
111
GLU
111
B
GLY
112
n
112
GLY
112
B
GLY
113
n
113
GLY
113
B
ALA
114
n
114
ALA
114
B
PRO
115
n
115
PRO
115
B
ARG
116
n
116
ARG
116
B
ALA
117
n
117
ALA
117
B
ASN
118
n
118
ASN
118
B
LEU
119
n
119
LEU
119
B
THR
120
n
120
THR
120
B
VAL
121
n
121
VAL
121
B
VAL
122
n
122
VAL
122
B
LEU
123
n
123
LEU
123
B
LEU
124
n
124
LEU
124
B
ARG
125
n
125
ARG
125
B
GLY
126
n
126
GLY
126
B
GLU
127
n
127
GLU
127
B
LYS
128
n
128
LYS
128
B
GLU
129
n
129
GLU
129
B
LEU
130
n
130
LEU
130
B
LYS
131
n
131
LYS
131
B
ARG
132
n
132
ARG
132
B
GLU
133
n
133
GLU
133
B
PRO
134
n
134
PRO
134
B
ALA
135
n
135
ALA
135
B
VAL
136
n
136
VAL
136
B
GLY
137
n
137
GLY
137
B
GLU
138
n
138
GLU
138
B
PRO
139
n
139
PRO
139
B
ALA
140
n
140
ALA
140
B
GLU
141
n
141
GLU
141
B
VAL
142
n
142
VAL
142
B
THR
143
n
143
THR
143
B
THR
144
n
144
THR
144
B
THR
145
n
145
THR
145
B
VAL
146
n
146
VAL
146
B
LEU
147
n
147
LEU
147
B
VAL
148
n
148
VAL
148
B
ARG
149
n
149
ARG
149
B
ARG
150
n
150
ARG
150
B
ASP
151
n
151
ASP
151
B
HIS
152
n
152
HIS
152
B
HIS
153
n
153
HIS
153
B
GLY
154
n
154
GLY
154
B
ALA
155
n
155
ALA
155
B
ASN
156
n
156
ASN
156
B
PHE
157
n
157
PHE
157
B
SER
158
n
158
SER
158
B
CYS
159
n
159
CYS
159
B
ARG
160
n
160
ARG
160
B
THR
161
n
161
THR
161
B
GLU
162
n
162
GLU
162
B
LEU
163
n
163
LEU
163
B
ASP
164
n
164
ASP
164
B
LEU
165
n
165
LEU
165
B
ARG
166
n
166
ARG
166
B
PRO
167
n
167
PRO
167
B
GLN
168
n
168
GLN
168
B
GLY
169
n
169
GLY
169
B
LEU
170
n
170
LEU
170
B
GLU
171
n
171
GLU
171
B
LEU
172
n
172
LEU
172
B
PHE
173
n
173
PHE
173
B
GLU
174
n
174
GLU
174
B
ASN
175
n
175
ASN
175
B
THR
176
n
176
THR
176
B
SER
177
n
177
SER
177
B
ALA
178
n
178
ALA
178
B
PRO
179
n
179
PRO
179
B
TYR
180
n
180
TYR
180
B
GLN
181
n
181
GLN
181
B
LEU
182
n
182
LEU
182
B
GLN
183
n
183
GLN
183
B
THR
184
n
184
THR
184
B
PHE
185
n
185
PHE
185
B
VAL
186
n
186
VAL
186
B
LEU
187
n
187
LEU
187
B
PRO
188
n
188
PRO
188
B
ALA
189
n
189
ALA
189
B
THR
190
n
190
THR
190
B
author_defined_assembly
2
dimeric
author_defined_assembly
2
dimeric
A
ASN
103
GLYCOSYLATION SITE
A
ASN
103
ASN
A
ASN
118
GLYCOSYLATION SITE
A
ASN
118
ASN
A
ASN
156
GLYCOSYLATION SITE
A
ASN
156
ASN
A
ASN
175
GLYCOSYLATION SITE
A
ASN
175
ASN
B
ASN
103
GLYCOSYLATION SITE
B
ASN
103
ASN
B
ASN
118
GLYCOSYLATION SITE
B
ASN
118
ASN
B
ASN
156
GLYCOSYLATION SITE
B
ASN
156
ASN
B
ASN
175
GLYCOSYLATION SITE
B
ASN
175
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_756
-x+2,y,-z+1
crystal symmetry operation
145.2621614777
0.0000000000
87.7734884972
A
O
SER
3
A
O
SER
3
A
N
SER
22
A
N
SER
22
A
O
VAL
17
A
O
VAL
17
A
N
LEU
54
A
N
LEU
54
A
O
VAL
9
A
O
VAL
9
A
N
PHE
79
A
N
PHE
79
A
O
LEU
30
A
O
LEU
30
A
N
ASN
68
A
N
ASN
68
A
O
CYS
65
A
O
CYS
65
A
N
ALA
76
A
N
ALA
76
A
O
ARG
88
A
O
ARG
88
A
N
GLU
111
A
N
GLU
111
A
O
LEU
104
A
O
LEU
104
A
N
VAL
146
A
N
VAL
146
A
O
GLN
98
A
O
GLN
98
A
N
GLN
183
A
N
GLN
183
A
O
PHE
173
A
O
PHE
173
A
N
LEU
163
A
N
LEU
163
A
O
SER
158
A
O
SER
158
A
N
LEU
124
A
N
LEU
124
A
O
VAL
121
A
O
VAL
121
A
N
GLU
133
A
N
GLU
133
B
O
SER
3
B
O
SER
3
B
N
SER
22
B
N
SER
22
B
O
VAL
17
B
O
VAL
17
B
N
LEU
54
B
N
LEU
54
B
O
VAL
51
B
O
VAL
51
B
N
LEU
42
B
N
LEU
42
B
O
VAL
9
B
O
VAL
9
B
N
PHE
79
B
N
PHE
79
B
O
GLY
72
B
O
GLY
72
B
N
CYS
69
B
N
CYS
69
B
O
TYR
66
B
O
TYR
66
B
N
GLY
32
B
N
GLY
32
B
O
ARG
88
B
O
ARG
88
B
N
GLU
111
B
N
GLU
111
B
O
LEU
104
B
O
LEU
104
B
N
VAL
146
B
N
VAL
146
B
O
GLN
98
B
O
GLN
98
B
N
GLN
183
B
N
GLN
183
B
O
THR
120
B
O
THR
120
B
N
GLU
162
B
N
GLU
162
B
O
ALA
155
B
O
ALA
155
B
N
LEU
182
B
N
LEU
182
B
O
THR
161
B
O
THR
161
B
N
ASN
175
B
N
ASN
175
1
A
CA
THR
190
WRONG HAND
1
D
C1
NAG
1
WRONG HAND
1
B
B
ND2
O5
ASN
NAG
118
312
2.19
1
B
PRO
188
-15.74
1
B
ALA
189
-23.44
1
A
TYR
83
0.068
SIDE CHAIN
1
9.84
1.50
119.30
129.14
A
A
A
C
N
CA
GLN
PRO
PRO
27
28
28
Y
1
17.18
2.30
115.30
132.48
A
A
A
CA
CB
CG
LEU
LEU
LEU
43
43
43
N
1
22.00
2.70
111.00
133.00
A
A
A
N
CA
C
SER
SER
SER
55
55
55
N
1
10.32
1.20
111.50
121.82
A
A
A
CB
CA
C
CYS
CYS
CYS
69
69
69
N
1
21.48
1.50
119.30
140.78
A
A
A
C
N
CA
CYS
PRO
PRO
69
70
70
Y
1
-34.39
2.10
128.40
94.01
A
A
A
C
N
CD
CYS
PRO
PRO
69
70
70
Y
1
11.99
1.80
110.60
122.59
A
A
A
N
CA
CB
ASP
ASP
ASP
71
71
71
N
1
-18.96
2.50
113.10
94.14
A
A
A
N
CA
C
GLY
GLY
GLY
72
72
72
N
1
14.83
2.30
115.30
130.13
A
A
A
CA
CB
CG
LEU
LEU
LEU
187
187
187
N
1
16.31
2.40
127.00
143.31
A
A
A
C
N
CA
LEU
PRO
PRO
187
188
188
Y
1
-18.34
2.20
120.60
102.26
A
A
A
C
N
CD
LEU
PRO
PRO
187
188
188
Y
1
29.45
2.70
111.00
140.45
A
A
A
N
CA
C
ALA
ALA
ALA
189
189
189
N
1
-16.61
2.30
115.30
98.69
B
B
B
CA
CB
CG
LEU
LEU
LEU
43
43
43
N
1
17.54
2.70
111.00
128.54
B
B
B
N
CA
C
LEU
LEU
LEU
43
43
43
N
1
10.29
1.50
119.30
129.59
B
B
B
C
N
CA
LEU
PRO
PRO
44
45
45
Y
1
9.16
1.50
119.30
128.46
B
B
B
C
N
CA
GLN
PRO
PRO
98
99
99
Y
1
18.98
1.50
119.30
138.28
B
B
B
C
N
CA
ARG
PRO
PRO
166
167
167
Y
1
-19.15
2.10
128.40
109.25
B
B
B
C
N
CD
ARG
PRO
PRO
166
167
167
Y
1
24.41
2.50
113.10
137.51
B
B
B
N
CA
C
GLY
GLY
GLY
169
169
169
N
1
18.75
2.70
111.00
129.75
B
B
B
N
CA
C
LEU
LEU
LEU
187
187
187
N
1
24.82
1.50
119.30
144.12
B
B
B
C
N
CA
LEU
PRO
PRO
187
188
188
Y
1
-20.04
2.10
128.40
108.36
B
B
B
C
N
CD
LEU
PRO
PRO
187
188
188
Y
1
30.09
2.60
112.10
142.19
B
B
B
N
CA
C
PRO
PRO
PRO
188
188
188
N
1
A
A
CB
CG
ASN
ASN
103
103
0.159
0.023
1.506
1.665
N
1
B
B
N
CA
ALA
ALA
189
189
0.149
0.020
1.459
1.608
N
1
B
B
CA
C
ALA
ALA
189
189
0.158
0.026
1.525
1.683
N
1
B
B
CA
CB
THR
THR
190
190
0.161
0.026
1.529
1.690
N
1
A
LEU
43
-62.71
62.15
1
A
ASN
56
-119.00
66.49
1
A
PRO
70
38.03
-125.24
1
A
GLN
73
156.40
-160.17
1
A
ALA
76
-172.64
113.80
1
A
TRP
84
-170.80
125.34
1
A
PRO
86
-33.73
136.51
1
A
LEU
130
-102.18
-61.58
1
A
LEU
170
-87.96
-132.32
1
A
PRO
188
0.44
127.98
1
A
ALA
189
-171.82
-145.69
1
B
SER
24
-112.66
52.68
1
B
ASN
48
-149.53
-28.25
1
B
GLN
58
-151.57
-44.18
1
B
PRO
70
-65.87
38.82
1
B
ASP
71
-163.73
-25.05
1
B
PRO
86
-48.97
170.84
1
B
VAL
100
-61.17
93.90
1
B
ARG
107
-164.95
109.62
1
B
GLU
127
93.55
1.33
1
B
ARG
132
163.12
107.73
1
B
GLU
138
171.65
100.54
1
B
PRO
167
36.38
-22.64
1
B
LEU
170
-139.51
-71.93
1
B
VAL
186
-106.81
-93.15
1
B
LEU
187
131.37
-77.28
1
B
PRO
188
9.03
178.29
1
B
ALA
189
152.33
31.93
49.5
THE AVERAGE B FACTOR FOR CHAIN A IS LOWER THAN FOR CHAIN B.
THE ELECTRON DENSITY IS NOT WELL DEFINED FOR RESIDUE
THR 190 IN BOTH CHAINS.
0.279
0.222
0.222
3.0
15.0
11286
10.0
91.3
1
2.0
SINGLE ISOMORPHOUS REPLACEMENT AND MOLECULAR REPLACEMENT
PDB ENTRIES 1ZXQ AND 1VSC
0.4
3.0
15.0
43
3131
154
0
2934
0.018
2.808
1.5
2.0
2.0
2.5
0.381
0.282
3.14
1037
8
10.
86.7
2.9
20.
1IC1
13176
0.101
1
6.2
2.4
95.
0.389
2.9
3.0
2.0
1
2.4
97.4
data reduction
DENZO
data scaling
SCALEPACK
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
THE CRYSTAL STRUCTURE FOR THE N-TERMINAL TWO DOMAINS OF ICAM-1
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
A
PRO
115
A
PRO
115
HELX_P
A
ALA
117
A
ALA
117
5
1
3
A
ARG
149
A
ARG
149
HELX_P
A
HIS
153
A
HIS
153
5
2
5
B
PRO
115
B
PRO
115
HELX_P
B
ALA
117
B
ALA
117
5
3
3
disulf
2.021
A
CYS
21
A
SG
CYS
21
1_555
A
CYS
65
A
SG
CYS
65
1_555
disulf
2.033
A
CYS
25
A
SG
CYS
25
1_555
A
CYS
69
A
SG
CYS
69
1_555
disulf
2.012
A
CYS
108
A
SG
CYS
108
1_555
A
CYS
159
A
SG
CYS
159
1_555
disulf
2.031
B
CYS
21
B
SG
CYS
21
1_555
B
CYS
65
B
SG
CYS
65
1_555
disulf
2.014
B
CYS
25
B
SG
CYS
25
1_555
B
CYS
69
B
SG
CYS
69
1_555
disulf
2.030
B
CYS
108
B
SG
CYS
108
1_555
B
CYS
159
B
SG
CYS
159
1_555
covale
1.483
one
N-Glycosylation
A
ASN
103
A
ND2
ASN
103
1_555
A
NAG
311
F
C1
NAG
1_555
covale
1.443
one
N-Glycosylation
A
ASN
118
A
ND2
ASN
118
1_555
A
NAG
312
G
C1
NAG
1_555
covale
1.434
one
N-Glycosylation
A
ASN
156
A
ND2
ASN
156
1_555
A
NAG
313
H
C1
NAG
1_555
covale
1.447
one
N-Glycosylation
A
ASN
175
A
ND2
ASN
175
1_555
C
NAG
1
C
C1
NAG
1_555
covale
1.474
one
N-Glycosylation
B
ASN
103
B
ND2
ASN
103
1_555
B
NAG
311
I
C1
NAG
1_555
covale
1.463
one
N-Glycosylation
B
ASN
118
B
ND2
ASN
118
1_555
B
NAG
312
J
C1
NAG
1_555
covale
1.464
one
N-Glycosylation
B
ASN
156
B
ND2
ASN
156
1_555
D
NAG
1
D
C1
NAG
1_555
covale
1.457
one
N-Glycosylation
B
ASN
175
B
ND2
ASN
175
1_555
E
NAG
1
E
C1
NAG
1_555
covale
1.389
both
C
NAG
1
C
O4
NAG
1_555
C
NAG
2
C
C1
NAG
1_555
covale
1.382
both
D
NAG
1
D
O4
NAG
1_555
D
NAG
2
D
C1
NAG
1_555
covale
1.437
both
E
NAG
1
E
O4
NAG
1_555
E
NAG
2
E
C1
NAG
1_555
CELL ADHESION
ICAM-1, IMMUNOGLOBULIN FOLD, CELL ADHESION, GLYCOPROTEIN
A
SER
5
A
SER
5
1
A
PRO
6
A
PRO
6
-0.89
A
ALA
114
A
ALA
114
1
A
PRO
115
A
PRO
115
-1.60
A
GLU
138
A
GLU
138
1
A
PRO
139
A
PRO
139
0.84
A
LEU
187
A
LEU
187
1
A
PRO
188
A
PRO
188
-2.31
B
SER
5
B
SER
5
1
B
PRO
6
B
PRO
6
0.25
B
ALA
114
B
ALA
114
1
B
PRO
115
B
PRO
115
3.59
B
GLU
138
B
GLU
138
1
B
PRO
139
B
PRO
139
0.52
given
-0.725335
-0.085912
-0.683014
-0.155902
-0.945902
0.284541
-0.670510
0.312870
0.672702
82.66422
34.68360
17.09690
ICA1_HUMAN
UNP
1
1
P05362
MAPSSPRPALPALLVLLGALFPGPGNAQTSVSPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYE
LSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKRE
PAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLD
GLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKP
EVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDE
RDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRDLEGTYLCRARSTQGEVTREVTVNVLSPRYE
IVIITVVAAAVIMGTAGLSTYLYNRQRKIKKYRLQQAQKGTPMKPNTQATPP
28
217
1IC1
1
190
P05362
A
1
1
190
28
217
1IC1
1
190
P05362
B
1
1
190
3
2
3
3
2
4
4
4
3
2
3
2
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
3
A
SER
3
A
SER
5
A
SER
5
A
VAL
17
A
VAL
17
A
SER
22
A
SER
22
A
ARG
49
A
ARG
49
A
LEU
54
A
LEU
54
A
LYS
8
A
LYS
8
A
PRO
12
A
PRO
12
A
PHE
79
A
PHE
79
A
TYR
83
A
TYR
83
A
LEU
30
A
LEU
30
A
GLU
34
A
GLU
34
A
MET
64
A
MET
64
A
ASN
68
A
ASN
68
A
SER
74
A
SER
74
A
LYS
77
A
LYS
77
A
ARG
88
A
ARG
88
A
LEU
91
A
LEU
91
A
ASN
103
A
ASN
103
A
GLU
111
A
GLU
111
A
ALA
140
A
ALA
140
A
LEU
147
A
LEU
147
A
TRP
97
A
TRP
97
A
PRO
99
A
PRO
99
A
GLN
183
A
GLN
183
A
PHE
185
A
PHE
185
A
LEU
172
A
LEU
172
A
THR
176
A
THR
176
A
PHE
157
A
PHE
157
A
ASP
164
A
ASP
164
A
LEU
119
A
LEU
119
A
ARG
125
A
ARG
125
A
LYS
128
A
LYS
128
A
PRO
134
A
PRO
134
B
THR
2
B
THR
2
B
SER
5
B
SER
5
B
VAL
17
B
VAL
17
B
THR
23
B
THR
23
B
ARG
49
B
ARG
49
B
SER
55
B
SER
55
B
PRO
38
B
PRO
38
B
LEU
42
B
LEU
42
B
LYS
8
B
LYS
8
B
PRO
12
B
PRO
12
B
GLY
72
B
GLY
72
B
TYR
83
B
TYR
83
B
SER
61
B
SER
61
B
CYS
69
B
CYS
69
B
LEU
30
B
LEU
30
B
ILE
33
B
ILE
33
B
ARG
88
B
ARG
88
B
LEU
91
B
LEU
91
B
ASN
103
B
ASN
103
B
GLU
111
B
GLU
111
B
ALA
140
B
ALA
140
B
LEU
147
B
LEU
147
B
TRP
97
B
TRP
97
B
PRO
99
B
PRO
99
B
GLN
183
B
GLN
183
B
PHE
185
B
PHE
185
B
LEU
119
B
LEU
119
B
ARG
125
B
ARG
125
B
ALA
155
B
ALA
155
B
LEU
163
B
LEU
163
B
TYR
180
B
TYR
180
B
LEU
182
B
LEU
182
B
ARG
160
B
ARG
160
B
ASP
164
B
ASP
164
B
LEU
172
B
LEU
172
B
THR
176
B
THR
176
3
P 1 2 1