0.017478
0.000000
0.000000
0.000000
0.017478
0.000000
0.000000
0.000000
0.004203
0.00000
0.00000
0.00000
Shiroishi, M.
Yokota, A.
Tsumoto, K.
Kondo, H.
Nishimiya, Y.
Horii, K.
Matsushima, M.
Ogasahara, K.
Yutani, K.
Kumagai, I.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
57.215
57.215
237.903
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
276
23042
23050
10.1074/jbc.M100480200
11297547
Structural evidence for entropic contribution of salt bridge formation to a protein antigen-antibody interaction: the case of hen lysozyme-HyHEL-10 Fv complex.
2001
10.2210/pdb1ic7/pdb
pdb_00001ic7
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
277
1
IMAGE PLATE
1999-07-01
MACSCIENCE
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
MACSCIENCE
11623.810
LYSOZYME BINDING IG KAPPA CHAIN
1
man
polymer
12707.919
IGG1 FAB CHAIN H
RESIDUES 1-114
D32A/D99A
1
man
polymer
14331.160
LYSOZYME C
3.2.1.17
1
nat
polymer
18.015
water
133
nat
water
no
no
DIVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET
EDFGMYFCQQSNSWPYTFGGGTKLEIK
DIVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET
EDFGMYFCQQSNSWPYTFGGGTKLEIK
L
polypeptide(L)
no
no
DVQLQESGPSLVKPSQTLSLTCSVTGDSITSAYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYL
DLNSVTTEDTATYYCANWAGDYWGQGTLVTVSAA
DVQLQESGPSLVKPSQTLSLTCSVTGDSITSAYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYL
DLNSVTTEDTATYYCANWAGDYWGQGTLVTVSAA
H
polypeptide(L)
no
no
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
Y
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
Escherichia coli
sample
10090
Mus musculus
469008
Escherichia coli BL21(DE3)
BL21(DE3)
house mouse
Mus
Escherichia
Escherichia coli
sample
10090
Mus musculus
469008
Escherichia coli BL21(DE3)
BL21(DE3)
chicken
Gallus
sample
9031
Gallus gallus
1
2.52
51.14
VAPOR DIFFUSION, HANGING DROP
7.6
HEPES, PEG6000, MPD, pH 7.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
database_2
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Database references
1
0
2001-07-18
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-11-10
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
1ic4 contains lysozyme binding Ig kappa chain and
IgG1 Fab Chain H (D32A) and LYSOZYME C
1ic5 contains lysozyme binding Ig kappa chain and
IgG1 Fab Chain H (D99A) and LYSOZYME C
RCSB
Y
PDBJ
2001-03-30
REL
HOH
water
WAT
1
4
HOH
HOH
108
L
WAT
2
4
HOH
HOH
109
L
WAT
3
4
HOH
HOH
110
L
WAT
7
4
HOH
HOH
111
L
WAT
17
4
HOH
HOH
112
L
WAT
19
4
HOH
HOH
113
L
WAT
21
4
HOH
HOH
114
L
WAT
22
4
HOH
HOH
115
L
WAT
24
4
HOH
HOH
116
L
WAT
31
4
HOH
HOH
117
L
WAT
32
4
HOH
HOH
118
L
WAT
33
4
HOH
HOH
119
L
WAT
36
4
HOH
HOH
120
L
WAT
38
4
HOH
HOH
121
L
WAT
40
4
HOH
HOH
122
L
WAT
46
4
HOH
HOH
123
L
WAT
53
4
HOH
HOH
124
L
WAT
58
4
HOH
HOH
125
L
WAT
60
4
HOH
HOH
126
L
WAT
78
4
HOH
HOH
127
L
WAT
87
4
HOH
HOH
128
L
WAT
88
4
HOH
HOH
129
L
WAT
89
4
HOH
HOH
130
L
WAT
90
4
HOH
HOH
131
L
WAT
91
4
HOH
HOH
132
L
WAT
92
4
HOH
HOH
133
L
WAT
93
4
HOH
HOH
134
L
WAT
94
4
HOH
HOH
135
L
WAT
95
4
HOH
HOH
136
L
WAT
96
4
HOH
HOH
137
L
WAT
97
4
HOH
HOH
138
L
WAT
99
4
HOH
HOH
139
L
WAT
100
4
HOH
HOH
140
L
WAT
101
4
HOH
HOH
141
L
WAT
102
4
HOH
HOH
142
L
WAT
105
4
HOH
HOH
143
L
WAT
106
4
HOH
HOH
144
L
WAT
107
4
HOH
HOH
145
L
WAT
125
4
HOH
HOH
146
L
WAT
127
4
HOH
HOH
147
L
WAT
128
4
HOH
HOH
148
L
WAT
133
4
HOH
HOH
149
L
WAT
9
4
HOH
HOH
115
H
WAT
11
4
HOH
HOH
116
H
WAT
23
4
HOH
HOH
117
H
WAT
25
4
HOH
HOH
118
H
WAT
42
4
HOH
HOH
119
H
WAT
43
4
HOH
HOH
120
H
WAT
44
4
HOH
HOH
121
H
WAT
47
4
HOH
HOH
122
H
WAT
50
4
HOH
HOH
123
H
WAT
51
4
HOH
HOH
124
H
WAT
54
4
HOH
HOH
125
H
WAT
55
4
HOH
HOH
126
H
WAT
56
4
HOH
HOH
127
H
WAT
62
4
HOH
HOH
128
H
WAT
69
4
HOH
HOH
129
H
WAT
70
4
HOH
HOH
130
H
WAT
71
4
HOH
HOH
131
H
WAT
72
4
HOH
HOH
132
H
WAT
73
4
HOH
HOH
133
H
WAT
74
4
HOH
HOH
134
H
WAT
75
4
HOH
HOH
135
H
WAT
76
4
HOH
HOH
136
H
WAT
77
4
HOH
HOH
137
H
WAT
79
4
HOH
HOH
138
H
WAT
80
4
HOH
HOH
139
H
WAT
81
4
HOH
HOH
140
H
WAT
82
4
HOH
HOH
141
H
WAT
83
4
HOH
HOH
142
H
WAT
84
4
HOH
HOH
143
H
WAT
85
4
HOH
HOH
144
H
WAT
86
4
HOH
HOH
145
H
WAT
98
4
HOH
HOH
146
H
WAT
103
4
HOH
HOH
147
H
WAT
104
4
HOH
HOH
148
H
WAT
108
4
HOH
HOH
149
H
WAT
119
4
HOH
HOH
150
H
WAT
120
4
HOH
HOH
151
H
WAT
121
4
HOH
HOH
152
H
WAT
122
4
HOH
HOH
153
H
WAT
124
4
HOH
HOH
154
H
WAT
129
4
HOH
HOH
155
H
WAT
4
4
HOH
HOH
130
Y
WAT
5
4
HOH
HOH
131
Y
WAT
6
4
HOH
HOH
132
Y
WAT
8
4
HOH
HOH
133
Y
WAT
10
4
HOH
HOH
134
Y
WAT
12
4
HOH
HOH
135
Y
WAT
13
4
HOH
HOH
136
Y
WAT
14
4
HOH
HOH
137
Y
WAT
15
4
HOH
HOH
138
Y
WAT
16
4
HOH
HOH
139
Y
WAT
18
4
HOH
HOH
140
Y
WAT
20
4
HOH
HOH
141
Y
WAT
26
4
HOH
HOH
142
Y
WAT
27
4
HOH
HOH
143
Y
WAT
28
4
HOH
HOH
144
Y
WAT
29
4
HOH
HOH
145
Y
WAT
30
4
HOH
HOH
146
Y
WAT
34
4
HOH
HOH
147
Y
WAT
35
4
HOH
HOH
148
Y
WAT
37
4
HOH
HOH
149
Y
WAT
39
4
HOH
HOH
150
Y
WAT
41
4
HOH
HOH
151
Y
WAT
45
4
HOH
HOH
152
Y
WAT
48
4
HOH
HOH
153
Y
WAT
49
4
HOH
HOH
154
Y
WAT
52
4
HOH
HOH
155
Y
WAT
57
4
HOH
HOH
156
Y
WAT
59
4
HOH
HOH
157
Y
WAT
61
4
HOH
HOH
158
Y
WAT
63
4
HOH
HOH
159
Y
WAT
64
4
HOH
HOH
160
Y
WAT
65
4
HOH
HOH
161
Y
WAT
66
4
HOH
HOH
162
Y
WAT
67
4
HOH
HOH
163
Y
WAT
68
4
HOH
HOH
164
Y
WAT
109
4
HOH
HOH
165
Y
WAT
110
4
HOH
HOH
166
Y
WAT
111
4
HOH
HOH
167
Y
WAT
112
4
HOH
HOH
168
Y
WAT
113
4
HOH
HOH
169
Y
WAT
114
4
HOH
HOH
170
Y
WAT
115
4
HOH
HOH
171
Y
WAT
116
4
HOH
HOH
172
Y
WAT
117
4
HOH
HOH
173
Y
WAT
118
4
HOH
HOH
174
Y
WAT
123
4
HOH
HOH
175
Y
WAT
126
4
HOH
HOH
176
Y
WAT
130
4
HOH
HOH
177
Y
WAT
131
4
HOH
HOH
178
Y
WAT
132
4
HOH
HOH
179
Y
ASP
1
n
1
ASP
1
L
ILE
2
n
2
ILE
2
L
VAL
3
n
3
VAL
3
L
LEU
4
n
4
LEU
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
SER
7
n
7
SER
7
L
PRO
8
n
8
PRO
8
L
ALA
9
n
9
ALA
9
L
THR
10
n
10
THR
10
L
LEU
11
n
11
LEU
11
L
SER
12
n
12
SER
12
L
VAL
13
n
13
VAL
13
L
THR
14
n
14
THR
14
L
PRO
15
n
15
PRO
15
L
GLY
16
n
16
GLY
16
L
ASN
17
n
17
ASN
17
L
SER
18
n
18
SER
18
L
VAL
19
n
19
VAL
19
L
SER
20
n
20
SER
20
L
LEU
21
n
21
LEU
21
L
SER
22
n
22
SER
22
L
CYS
23
n
23
CYS
23
L
ARG
24
n
24
ARG
24
L
ALA
25
n
25
ALA
25
L
SER
26
n
26
SER
26
L
GLN
27
n
27
GLN
27
L
SER
28
n
28
SER
28
L
ILE
29
n
29
ILE
29
L
GLY
30
n
30
GLY
30
L
ASN
31
n
31
ASN
31
L
ASN
32
n
32
ASN
32
L
LEU
33
n
33
LEU
33
L
HIS
34
n
34
HIS
34
L
TRP
35
n
35
TRP
35
L
TYR
36
n
36
TYR
36
L
GLN
37
n
37
GLN
37
L
GLN
38
n
38
GLN
38
L
LYS
39
n
39
LYS
39
L
SER
40
n
40
SER
40
L
HIS
41
n
41
HIS
41
L
GLU
42
n
42
GLU
42
L
SER
43
n
43
SER
43
L
PRO
44
n
44
PRO
44
L
ARG
45
n
45
ARG
45
L
LEU
46
n
46
LEU
46
L
LEU
47
n
47
LEU
47
L
ILE
48
n
48
ILE
48
L
LYS
49
n
49
LYS
49
L
TYR
50
n
50
TYR
50
L
ALA
51
n
51
ALA
51
L
SER
52
n
52
SER
52
L
GLN
53
n
53
GLN
53
L
SER
54
n
54
SER
54
L
ILE
55
n
55
ILE
55
L
SER
56
n
56
SER
56
L
GLY
57
n
57
GLY
57
L
ILE
58
n
58
ILE
58
L
PRO
59
n
59
PRO
59
L
SER
60
n
60
SER
60
L
ARG
61
n
61
ARG
61
L
PHE
62
n
62
PHE
62
L
SER
63
n
63
SER
63
L
GLY
64
n
64
GLY
64
L
SER
65
n
65
SER
65
L
GLY
66
n
66
GLY
66
L
SER
67
n
67
SER
67
L
GLY
68
n
68
GLY
68
L
THR
69
n
69
THR
69
L
ASP
70
n
70
ASP
70
L
PHE
71
n
71
PHE
71
L
THR
72
n
72
THR
72
L
LEU
73
n
73
LEU
73
L
SER
74
n
74
SER
74
L
ILE
75
n
75
ILE
75
L
ASN
76
n
76
ASN
76
L
SER
77
n
77
SER
77
L
VAL
78
n
78
VAL
78
L
GLU
79
n
79
GLU
79
L
THR
80
n
80
THR
80
L
GLU
81
n
81
GLU
81
L
ASP
82
n
82
ASP
82
L
PHE
83
n
83
PHE
83
L
GLY
84
n
84
GLY
84
L
MET
85
n
85
MET
85
L
TYR
86
n
86
TYR
86
L
PHE
87
n
87
PHE
87
L
CYS
88
n
88
CYS
88
L
GLN
89
n
89
GLN
89
L
GLN
90
n
90
GLN
90
L
SER
91
n
91
SER
91
L
ASN
92
n
92
ASN
92
L
SER
93
n
93
SER
93
L
TRP
94
n
94
TRP
94
L
PRO
95
n
95
PRO
95
L
TYR
96
n
96
TYR
96
L
THR
97
n
97
THR
97
L
PHE
98
n
98
PHE
98
L
GLY
99
n
99
GLY
99
L
GLY
100
n
100
GLY
100
L
GLY
101
n
101
GLY
101
L
THR
102
n
102
THR
102
L
LYS
103
n
103
LYS
103
L
LEU
104
n
104
LEU
104
L
GLU
105
n
105
GLU
105
L
ILE
106
n
106
ILE
106
L
LYS
107
n
107
LYS
107
L
ASP
1
n
1
ASP
1
H
VAL
2
n
2
VAL
2
H
GLN
3
n
3
GLN
3
H
LEU
4
n
4
LEU
4
H
GLN
5
n
5
GLN
5
H
GLU
6
n
6
GLU
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
PRO
9
n
9
PRO
9
H
SER
10
n
10
SER
10
H
LEU
11
n
11
LEU
11
H
VAL
12
n
12
VAL
12
H
LYS
13
n
13
LYS
13
H
PRO
14
n
14
PRO
14
H
SER
15
n
15
SER
15
H
GLN
16
n
16
GLN
16
H
THR
17
n
17
THR
17
H
LEU
18
n
18
LEU
18
H
SER
19
n
19
SER
19
H
LEU
20
n
20
LEU
20
H
THR
21
n
21
THR
21
H
CYS
22
n
22
CYS
22
H
SER
23
n
23
SER
23
H
VAL
24
n
24
VAL
24
H
THR
25
n
25
THR
25
H
GLY
26
n
26
GLY
26
H
ASP
27
n
27
ASP
27
H
SER
28
n
28
SER
28
H
ILE
29
n
29
ILE
29
H
THR
30
n
30
THR
30
H
SER
31
n
31
SER
31
H
ALA
32
n
32
ALA
32
H
TYR
33
n
33
TYR
33
H
TRP
34
n
34
TRP
34
H
SER
35
n
35
SER
35
H
TRP
36
n
36
TRP
36
H
ILE
37
n
37
ILE
37
H
ARG
38
n
38
ARG
38
H
LYS
39
n
39
LYS
39
H
PHE
40
n
40
PHE
40
H
PRO
41
n
41
PRO
41
H
GLY
42
n
42
GLY
42
H
ASN
43
n
43
ASN
43
H
ARG
44
n
44
ARG
44
H
LEU
45
n
45
LEU
45
H
GLU
46
n
46
GLU
46
H
TYR
47
n
47
TYR
47
H
MET
48
n
48
MET
48
H
GLY
49
n
49
GLY
49
H
TYR
50
n
50
TYR
50
H
VAL
51
n
51
VAL
51
H
SER
52
n
52
SER
52
H
TYR
53
n
53
TYR
53
H
SER
54
n
54
SER
54
H
GLY
55
n
55
GLY
55
H
SER
56
n
56
SER
56
H
THR
57
n
57
THR
57
H
TYR
58
n
58
TYR
58
H
TYR
59
n
59
TYR
59
H
ASN
60
n
60
ASN
60
H
PRO
61
n
61
PRO
61
H
SER
62
n
62
SER
62
H
LEU
63
n
63
LEU
63
H
LYS
64
n
64
LYS
64
H
SER
65
n
65
SER
65
H
ARG
66
n
66
ARG
66
H
ILE
67
n
67
ILE
67
H
SER
68
n
68
SER
68
H
ILE
69
n
69
ILE
69
H
THR
70
n
70
THR
70
H
ARG
71
n
71
ARG
71
H
ASP
72
n
72
ASP
72
H
THR
73
n
73
THR
73
H
SER
74
n
74
SER
74
H
LYS
75
n
75
LYS
75
H
ASN
76
n
76
ASN
76
H
GLN
77
n
77
GLN
77
H
TYR
78
n
78
TYR
78
H
TYR
79
n
79
TYR
79
H
LEU
80
n
80
LEU
80
H
ASP
81
n
81
ASP
81
H
LEU
82
n
82
LEU
82
H
ASN
83
n
83
ASN
83
H
SER
84
n
84
SER
84
H
VAL
85
n
85
VAL
85
H
THR
86
n
86
THR
86
H
THR
87
n
87
THR
87
H
GLU
88
n
88
GLU
88
H
ASP
89
n
89
ASP
89
H
THR
90
n
90
THR
90
H
ALA
91
n
91
ALA
91
H
THR
92
n
92
THR
92
H
TYR
93
n
93
TYR
93
H
TYR
94
n
94
TYR
94
H
CYS
95
n
95
CYS
95
H
ALA
96
n
96
ALA
96
H
ASN
97
n
97
ASN
97
H
TRP
98
n
98
TRP
98
H
ALA
99
n
99
ALA
99
H
GLY
100
n
100
GLY
100
H
ASP
101
n
101
ASP
101
H
TYR
102
n
102
TYR
102
H
TRP
103
n
103
TRP
103
H
GLY
104
n
104
GLY
104
H
GLN
105
n
105
GLN
105
H
GLY
106
n
106
GLY
106
H
THR
107
n
107
THR
107
H
LEU
108
n
108
LEU
108
H
VAL
109
n
109
VAL
109
H
THR
110
n
110
THR
110
H
VAL
111
n
111
VAL
111
H
SER
112
n
112
SER
112
H
ALA
113
n
113
ALA
113
H
ALA
114
n
114
ALA
114
H
LYS
1
n
1
LYS
1
Y
VAL
2
n
2
VAL
2
Y
PHE
3
n
3
PHE
3
Y
GLY
4
n
4
GLY
4
Y
ARG
5
n
5
ARG
5
Y
CYS
6
n
6
CYS
6
Y
GLU
7
n
7
GLU
7
Y
LEU
8
n
8
LEU
8
Y
ALA
9
n
9
ALA
9
Y
ALA
10
n
10
ALA
10
Y
ALA
11
n
11
ALA
11
Y
MET
12
n
12
MET
12
Y
LYS
13
n
13
LYS
13
Y
ARG
14
n
14
ARG
14
Y
HIS
15
n
15
HIS
15
Y
GLY
16
n
16
GLY
16
Y
LEU
17
n
17
LEU
17
Y
ASP
18
n
18
ASP
18
Y
ASN
19
n
19
ASN
19
Y
TYR
20
n
20
TYR
20
Y
ARG
21
n
21
ARG
21
Y
GLY
22
n
22
GLY
22
Y
TYR
23
n
23
TYR
23
Y
SER
24
n
24
SER
24
Y
LEU
25
n
25
LEU
25
Y
GLY
26
n
26
GLY
26
Y
ASN
27
n
27
ASN
27
Y
TRP
28
n
28
TRP
28
Y
VAL
29
n
29
VAL
29
Y
CYS
30
n
30
CYS
30
Y
ALA
31
n
31
ALA
31
Y
ALA
32
n
32
ALA
32
Y
LYS
33
n
33
LYS
33
Y
PHE
34
n
34
PHE
34
Y
GLU
35
n
35
GLU
35
Y
SER
36
n
36
SER
36
Y
ASN
37
n
37
ASN
37
Y
PHE
38
n
38
PHE
38
Y
ASN
39
n
39
ASN
39
Y
THR
40
n
40
THR
40
Y
GLN
41
n
41
GLN
41
Y
ALA
42
n
42
ALA
42
Y
THR
43
n
43
THR
43
Y
ASN
44
n
44
ASN
44
Y
ARG
45
n
45
ARG
45
Y
ASN
46
n
46
ASN
46
Y
THR
47
n
47
THR
47
Y
ASP
48
n
48
ASP
48
Y
GLY
49
n
49
GLY
49
Y
SER
50
n
50
SER
50
Y
THR
51
n
51
THR
51
Y
ASP
52
n
52
ASP
52
Y
TYR
53
n
53
TYR
53
Y
GLY
54
n
54
GLY
54
Y
ILE
55
n
55
ILE
55
Y
LEU
56
n
56
LEU
56
Y
GLN
57
n
57
GLN
57
Y
ILE
58
n
58
ILE
58
Y
ASN
59
n
59
ASN
59
Y
SER
60
n
60
SER
60
Y
ARG
61
n
61
ARG
61
Y
TRP
62
n
62
TRP
62
Y
TRP
63
n
63
TRP
63
Y
CYS
64
n
64
CYS
64
Y
ASN
65
n
65
ASN
65
Y
ASP
66
n
66
ASP
66
Y
GLY
67
n
67
GLY
67
Y
ARG
68
n
68
ARG
68
Y
THR
69
n
69
THR
69
Y
PRO
70
n
70
PRO
70
Y
GLY
71
n
71
GLY
71
Y
SER
72
n
72
SER
72
Y
ARG
73
n
73
ARG
73
Y
ASN
74
n
74
ASN
74
Y
LEU
75
n
75
LEU
75
Y
CYS
76
n
76
CYS
76
Y
ASN
77
n
77
ASN
77
Y
ILE
78
n
78
ILE
78
Y
PRO
79
n
79
PRO
79
Y
CYS
80
n
80
CYS
80
Y
SER
81
n
81
SER
81
Y
ALA
82
n
82
ALA
82
Y
LEU
83
n
83
LEU
83
Y
LEU
84
n
84
LEU
84
Y
SER
85
n
85
SER
85
Y
SER
86
n
86
SER
86
Y
ASP
87
n
87
ASP
87
Y
ILE
88
n
88
ILE
88
Y
THR
89
n
89
THR
89
Y
ALA
90
n
90
ALA
90
Y
SER
91
n
91
SER
91
Y
VAL
92
n
92
VAL
92
Y
ASN
93
n
93
ASN
93
Y
CYS
94
n
94
CYS
94
Y
ALA
95
n
95
ALA
95
Y
LYS
96
n
96
LYS
96
Y
LYS
97
n
97
LYS
97
Y
ILE
98
n
98
ILE
98
Y
VAL
99
n
99
VAL
99
Y
SER
100
n
100
SER
100
Y
ASP
101
n
101
ASP
101
Y
GLY
102
n
102
GLY
102
Y
ASN
103
n
103
ASN
103
Y
GLY
104
n
104
GLY
104
Y
MET
105
n
105
MET
105
Y
ASN
106
n
106
ASN
106
Y
ALA
107
n
107
ALA
107
Y
TRP
108
n
108
TRP
108
Y
VAL
109
n
109
VAL
109
Y
ALA
110
n
110
ALA
110
Y
TRP
111
n
111
TRP
111
Y
ARG
112
n
112
ARG
112
Y
ASN
113
n
113
ASN
113
Y
ARG
114
n
114
ARG
114
Y
CYS
115
n
115
CYS
115
Y
LYS
116
n
116
LYS
116
Y
GLY
117
n
117
GLY
117
Y
THR
118
n
118
THR
118
Y
ASP
119
n
119
ASP
119
Y
VAL
120
n
120
VAL
120
Y
GLN
121
n
121
GLN
121
Y
ALA
122
n
122
ALA
122
Y
TRP
123
n
123
TRP
123
Y
ILE
124
n
124
ILE
124
Y
ARG
125
n
125
ARG
125
Y
GLY
126
n
126
GLY
126
Y
CYS
127
n
127
CYS
127
Y
ARG
128
n
128
ARG
128
Y
LEU
129
n
129
LEU
129
Y
author_defined_assembly
3
trimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
L
O
SER
7
A
O
SER
7
L
N
SER
22
A
N
SER
22
L
N
CYS
23
A
N
CYS
23
L
O
PHE
71
A
O
PHE
71
L
N
SER
74
A
N
SER
74
L
O
SER
63
A
O
SER
63
L
N
GLN
53
A
N
GLN
53
L
O
LYS
49
A
O
LYS
49
L
N
LEU
47
A
N
LEU
47
L
O
TRP
35
A
O
TRP
35
L
N
GLN
38
A
N
GLN
38
L
O
MET
85
A
O
MET
85
L
N
GLN
90
A
N
GLN
90
L
O
THR
97
A
O
THR
97
L
N
GLN
53
A
N
GLN
53
L
O
LYS
49
A
O
LYS
49
L
N
LEU
47
A
N
LEU
47
L
O
TRP
35
A
O
TRP
35
L
N
GLN
38
A
N
GLN
38
L
O
MET
85
A
O
MET
85
L
O
TYR
86
A
O
TYR
86
L
N
THR
102
A
N
THR
102
L
O
LYS
103
A
O
LYS
103
L
N
LEU
11
A
N
LEU
11
H
O
SER
7
B
O
SER
7
H
N
THR
21
B
N
THR
21
H
N
CYS
22
B
N
CYS
22
H
O
TYR
78
B
O
TYR
78
H
N
ASP
81
B
N
ASP
81
H
O
SER
68
B
O
SER
68
H
N
VAL
12
B
N
VAL
12
H
O
THR
110
B
O
THR
110
H
N
VAL
109
B
N
VAL
109
H
O
ALA
91
B
O
ALA
91
H
O
ALA
96
B
O
ALA
96
H
N
SER
35
B
N
SER
35
H
N
PHE
40
B
N
PHE
40
H
O
ARG
44
B
O
ARG
44
H
O
TYR
50
B
O
TYR
50
H
N
TYR
58
B
N
TYR
58
Y
O
ASN
44
C
O
ASN
44
Y
N
ASP
52
C
N
ASP
52
Y
N
TYR
53
C
N
TYR
53
Y
O
ILE
58
C
O
ILE
58
1
L
SER
7
21.51
1
L
TRP
94
24.35
1
L
L
SER
PRO
7
8
38.76
1
L
L
TRP
PRO
94
95
47.02
1
-8.70
1.40
111.50
102.80
L
L
L
CA
N
CD
PRO
PRO
PRO
8
8
8
N
1
7.70
1.10
102.60
110.30
L
L
L
N
CA
CB
PRO
PRO
PRO
8
8
8
N
1
7.73
1.20
103.80
111.53
L
L
L
N
CD
CG
PRO
PRO
PRO
8
8
8
N
1
-4.00
0.60
121.00
117.00
L
L
L
CB
CG
CD1
TYR
TYR
TYR
36
36
36
N
1
3.92
0.50
120.30
124.22
L
L
L
NE
CZ
NH1
ARG
ARG
ARG
61
61
61
N
1
-16.42
2.10
120.10
103.68
L
L
L
CA
C
O
TRP
TRP
TRP
94
94
94
N
1
-9.47
1.40
111.50
102.03
L
L
L
CA
N
CD
PRO
PRO
PRO
95
95
95
N
1
9.33
1.10
102.60
111.93
L
L
L
N
CA
CB
PRO
PRO
PRO
95
95
95
N
1
-4.57
0.60
121.00
116.43
H
H
H
CB
CG
CD2
TYR
TYR
TYR
33
33
33
N
1
4.22
0.60
121.00
125.22
H
H
H
CB
CG
CD1
TYR
TYR
TYR
33
33
33
N
1
12.88
2.00
116.20
129.08
H
H
H
CA
C
N
PRO
PRO
GLY
41
41
42
Y
1
-3.78
0.50
120.30
116.52
H
H
H
NE
CZ
NH2
ARG
ARG
ARG
44
44
44
N
1
-4.28
0.60
121.00
116.72
H
H
H
CB
CG
CD2
TYR
TYR
TYR
53
53
53
N
1
4.33
0.50
120.30
124.63
H
H
H
NE
CZ
NH1
ARG
ARG
ARG
66
66
66
N
1
-3.41
0.50
120.30
116.89
H
H
H
NE
CZ
NH2
ARG
ARG
ARG
66
66
66
N
1
-3.82
0.50
120.30
116.48
H
H
H
NE
CZ
NH2
ARG
ARG
ARG
71
71
71
N
1
7.18
0.90
118.30
125.48
H
H
H
CB
CG
OD1
ASP
ASP
ASP
81
81
81
N
1
3.49
0.50
120.30
123.79
Y
Y
Y
NE
CZ
NH1
ARG
ARG
ARG
21
21
21
N
1
7.37
1.10
119.40
126.77
Y
Y
Y
NH1
CZ
NH2
ARG
ARG
ARG
61
61
61
N
1
-6.27
0.50
120.30
114.03
Y
Y
Y
NE
CZ
NH1
ARG
ARG
ARG
61
61
61
N
1
13.17
1.40
123.60
136.77
Y
Y
Y
CD
NE
CZ
ARG
ARG
ARG
73
73
73
N
1
3.85
0.50
120.30
124.15
Y
Y
Y
NE
CZ
NH1
ARG
ARG
ARG
73
73
73
N
1
7.79
0.90
118.30
126.09
Y
Y
Y
CB
CG
OD1
ASP
ASP
ASP
87
87
87
N
1
-5.91
0.90
118.30
112.39
Y
Y
Y
CB
CG
OD1
ASP
ASP
ASP
101
101
101
N
1
-3.14
0.50
120.30
117.16
Y
Y
Y
NE
CZ
NH1
ARG
ARG
ARG
112
112
112
N
1
7.04
0.90
118.30
125.34
Y
Y
Y
CB
CG
OD1
ASP
ASP
ASP
119
119
119
N
1
L
ALA
51
71.17
-40.70
1
L
SER
77
68.13
76.60
1
H
SER
15
76.81
-3.04
1
H
PRO
41
-39.48
-38.06
1
H
ALA
113
-61.31
95.82
1
Y
PRO
70
-39.96
-88.61
1
Y
LEU
84
-108.98
59.79
0.23
0.177
0.176
2.1
8.0
2384
153223
23833
rondom
1
0.0
MOLECULAR REPLACEMENT
2.1
8.0
133
2848
0
0
2715
0.015
0.038
34.4
2.1
20.0
1IC7
153223
23833
0.0
0.058
1
11.2
4.5
98.9
0.342
2.1
2.21
4.5
98.9
data reduction
DENZO
data scaling
SCALA
phasing
AMoRE
refinement
REFMAC
data scaling
CCP4
(SCALA)
CRYSTAL STRUCTURE OF HYHEL-10 FV MUTANT(HD32A99A)-HEN LYSOZYME COMPLEX
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
L
GLU
79
A
GLU
79
HELX_P
L
PHE
83
A
PHE
83
5
1
5
H
SER
28
B
SER
28
HELX_P
H
ALA
32
B
ALA
32
5
2
5
H
PRO
61
B
PRO
61
HELX_P
H
LYS
64
B
LYS
64
5
3
4
H
THR
86
B
THR
86
HELX_P
H
THR
90
B
THR
90
5
4
5
Y
GLY
4
C
GLY
4
HELX_P
Y
HIS
15
C
HIS
15
1
5
12
Y
SER
24
C
SER
24
HELX_P
Y
ASN
37
C
ASN
37
1
6
14
Y
CYS
80
C
CYS
80
HELX_P
Y
LEU
84
C
LEU
84
5
7
5
Y
ILE
88
C
ILE
88
HELX_P
Y
SER
100
C
SER
100
1
8
13
Y
ASN
103
C
ASN
103
HELX_P
Y
ALA
107
C
ALA
107
5
9
5
Y
TRP
108
C
TRP
108
HELX_P
Y
CYS
115
C
CYS
115
1
10
8
Y
ASP
119
C
ASP
119
HELX_P
Y
ARG
125
C
ARG
125
5
11
7
disulf
1.999
L
CYS
23
A
SG
CYS
23
1_555
L
CYS
88
A
SG
CYS
88
1_555
disulf
1.981
H
CYS
22
B
SG
CYS
22
1_555
H
CYS
95
B
SG
CYS
95
1_555
disulf
2.057
Y
CYS
6
C
SG
CYS
6
1_555
Y
CYS
127
C
SG
CYS
127
1_555
disulf
1.959
Y
CYS
30
C
SG
CYS
30
1_555
Y
CYS
115
C
SG
CYS
115
1_555
disulf
2.064
Y
CYS
64
C
SG
CYS
64
1_555
Y
CYS
80
C
SG
CYS
80
1_555
disulf
1.993
Y
CYS
76
C
SG
CYS
76
1_555
Y
CYS
94
C
SG
CYS
94
1_555
PROTEIN BINDING/HYDROLASE
antigen-antibody complex, HYHEL-10, ANTI-HEN EGG WHITE LYSOZYME ANTIBODY, PROTEIN BINDING-HYDROLASE COMPLEX
KV5I_MOUSE
UNP
1
P01642
HV47_MOUSE
UNP
2
P01823
LYSC_CHICK
UNP
3
P00698
1
107
1IC7
1
107
P01642
L
1
1
107
1
114
1IC7
1
114
P01823
H
2
1
114
19
147
1IC7
1
129
P00698
Y
3
1
129
2
ASP
engineered mutation
ALA
32
1IC7
H
P01823
UNP
32
32
2
ASP
engineered mutation
ALA
99
1IC7
H
P01823
UNP
99
99
4
5
6
4
6
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
L
LEU
4
A
LEU
4
L
SER
7
A
SER
7
L
VAL
19
A
VAL
19
L
ALA
25
A
ALA
25
L
ASP
70
A
ASP
70
L
ILE
75
A
ILE
75
L
PHE
62
A
PHE
62
L
SER
67
A
SER
67
L
GLN
53
A
GLN
53
L
SER
54
A
SER
54
L
ARG
45
A
ARG
45
L
LYS
49
A
LYS
49
L
LEU
33
A
LEU
33
L
GLN
38
A
GLN
38
L
GLY
84
A
GLY
84
L
GLN
90
A
GLN
90
L
THR
97
A
THR
97
L
PHE
98
A
PHE
98
L
GLN
53
A
GLN
53
L
SER
54
A
SER
54
L
ARG
45
A
ARG
45
L
LYS
49
A
LYS
49
L
LEU
33
A
LEU
33
L
GLN
38
A
GLN
38
L
GLY
84
A
GLY
84
L
GLN
90
A
GLN
90
L
THR
102
A
THR
102
L
ILE
106
A
ILE
106
L
THR
10
A
THR
10
L
VAL
13
A
VAL
13
H
GLN
3
B
GLN
3
H
SER
7
B
SER
7
H
LEU
18
B
LEU
18
H
THR
25
B
THR
25
H
GLN
77
B
GLN
77
H
LEU
82
B
LEU
82
H
ILE
67
B
ILE
67
H
ASP
72
B
ASP
72
H
LEU
11
B
LEU
11
H
VAL
12
B
VAL
12
H
THR
107
B
THR
107
H
VAL
111
B
VAL
111
H
ALA
91
B
ALA
91
H
ASN
97
B
ASN
97
H
TRP
34
B
TRP
34
H
PHE
40
B
PHE
40
H
ARG
44
B
ARG
44
H
VAL
51
B
VAL
51
H
THR
57
B
THR
57
H
TYR
59
B
TYR
59
Y
THR
43
C
THR
43
Y
ARG
45
C
ARG
45
Y
THR
51
C
THR
51
Y
TYR
53
C
TYR
53
Y
ILE
58
C
ILE
58
Y
ASN
59
C
ASN
59
92
P 41 21 2