1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Bader, R. Rytz, G. Lerch, M. Beck-Sickinger, A.G. Zerbe, O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 41 8031 8042 10.1021/bi0201419 12069594 Key motif to gain selectivity at the neuropeptide Y5-receptor: structure and dynamics of micelle-bound [Ala31, Pro32]-NPY. 2002 10.2210/pdb1icy/pdb pdb_00001icy 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 4212.621 NEUROPEPTIDE Y I31A, T32P 1 man polymer NPY no yes YPSKPDNPGEDAPAEDLARYYSALRHYINLAPRQRY(NH2) YPSKPDNPGEDAPAEDLARYYSALRHYINLAPRQRYX A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n pig Sus Escherichia Escherichia coli sample 9823 Sus scrofa 469008 Escherichia coli BL21(DE3) BL21(DE3) PLASMID PUBK19-APNPY-G database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2002-05-08 1 1 2008-04-27 1 2 2011-07-13 1 3 2021-10-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id wild-type porcine NPY RCSB Y RCSB 2001-04-02 REL REL This structure was determined using standard 2D homonuclear techniques structures with NMR energies less than 3 kcal/mol 100 17 2D NOESY 0 6.0 1 atm 310 K 0 6.0 1 atm 310 K the structures are based on a total of 622 NOE cross peaks and 16 HNHA couplings indicative of non-averaged backbone conformations torsion angle dynamics 2 mM 31Ala,32Pro NPY, 300mM DPC, pH=6.0 90%H2O, 10% D2O 90% H2O/10% D2O 2 mM 31Ala,32Pro NPY, 300mM DPC, pH=6.0 99.9%D2O 99.9%D2O Bruker processing XwinNMR 2.1 Bartels et al data analysis XEASY 1.53 Guentert et al structure solution DYANA 1.5 Lunginbuehl et al. refinement OPAL (AMBER) 1.6 600 Bruker DRX 500 Bruker DRX TYR 1 n 1 TYR 1 A PRO 2 n 2 PRO 2 A SER 3 n 3 SER 3 A LYS 4 n 4 LYS 4 A PRO 5 n 5 PRO 5 A ASP 6 n 6 ASP 6 A ASN 7 n 7 ASN 7 A PRO 8 n 8 PRO 8 A GLY 9 n 9 GLY 9 A GLU 10 n 10 GLU 10 A ASP 11 n 11 ASP 11 A ALA 12 n 12 ALA 12 A PRO 13 n 13 PRO 13 A ALA 14 n 14 ALA 14 A GLU 15 n 15 GLU 15 A ASP 16 n 16 ASP 16 A LEU 17 n 17 LEU 17 A ALA 18 n 18 ALA 18 A ARG 19 n 19 ARG 19 A TYR 20 n 20 TYR 20 A TYR 21 n 21 TYR 21 A SER 22 n 22 SER 22 A ALA 23 n 23 ALA 23 A LEU 24 n 24 LEU 24 A ARG 25 n 25 ARG 25 A HIS 26 n 26 HIS 26 A TYR 27 n 27 TYR 27 A ILE 28 n 28 ILE 28 A ASN 29 n 29 ASN 29 A LEU 30 n 30 LEU 30 A ALA 31 n 31 ALA 31 A PRO 32 n 32 PRO 32 A ARG 33 n 33 ARG 33 A GLN 34 n 34 GLN 34 A ARG 35 n 35 ARG 35 A TYR 36 n 36 TYR 36 A NH2 37 n 37 NH2 37 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 1 A TYR 1 0.103 SIDE CHAIN 1 A TYR 27 0.075 SIDE CHAIN 1 A TYR 36 0.133 SIDE CHAIN 2 A TYR 1 0.085 SIDE CHAIN 4 A TYR 20 0.074 SIDE CHAIN 5 A TYR 27 0.091 SIDE CHAIN 6 A TYR 27 0.120 SIDE CHAIN 6 A TYR 36 0.095 SIDE CHAIN 7 A TYR 1 0.060 SIDE CHAIN 8 A TYR 20 0.091 SIDE CHAIN 8 A TYR 21 0.065 SIDE CHAIN 9 A TYR 1 0.125 SIDE CHAIN 9 A TYR 20 0.072 SIDE CHAIN 9 A TYR 21 0.092 SIDE CHAIN 9 A TYR 36 0.077 SIDE CHAIN 10 A TYR 21 0.106 SIDE CHAIN 11 A TYR 1 0.095 SIDE CHAIN 12 A TYR 21 0.102 SIDE CHAIN 13 A TYR 20 0.080 SIDE CHAIN 14 A TYR 20 0.074 SIDE CHAIN 14 A TYR 27 0.092 SIDE CHAIN 14 A TYR 36 0.080 SIDE CHAIN 16 A TYR 1 0.103 SIDE CHAIN 2 -4.53 0.50 120.30 115.77 A A A NE CZ NH2 ARG ARG ARG 25 25 25 N 4 -3.38 0.50 120.30 116.92 A A A NE CZ NH2 ARG ARG ARG 33 33 33 N 1 A PRO 2 -76.92 -163.16 1 A SER 3 71.27 -75.60 1 A LYS 4 163.46 -58.00 1 A ASP 6 177.67 101.55 1 A PRO 8 -74.68 -169.43 1 A ALA 12 -170.50 70.68 1 A ALA 14 -173.47 56.60 1 A ARG 33 39.16 75.59 1 A ARG 35 -86.29 38.61 2 A GLU 10 61.75 64.79 2 A ASP 11 -167.17 -57.66 2 A ALA 12 -172.36 73.53 2 A ALA 14 -171.53 57.99 2 A ASP 16 -54.12 -78.74 2 A LEU 30 -153.05 32.23 2 A PRO 32 -68.24 78.54 2 A ARG 33 59.05 -88.99 3 A ASP 6 77.30 140.86 3 A PRO 8 -74.44 -160.57 3 A GLU 10 -177.84 140.08 3 A ASP 11 60.95 84.29 3 A ALA 12 58.30 82.51 3 A LEU 30 -153.96 20.62 3 A ARG 33 -177.55 87.53 3 A GLN 34 64.21 66.98 4 A SER 3 70.66 162.23 4 A LYS 4 -177.34 85.10 4 A GLU 10 -171.18 51.74 4 A ASP 11 172.41 -89.82 4 A ALA 14 -157.51 61.90 4 A PRO 32 -69.77 91.89 4 A ARG 33 42.59 70.79 4 A GLN 34 45.37 26.95 5 A SER 3 -47.97 156.82 5 A LYS 4 176.98 -65.45 5 A ASP 6 178.53 145.28 5 A ALA 12 -170.77 67.24 5 A ALA 14 -173.00 61.23 5 A GLN 34 -169.55 77.01 6 A LYS 4 -151.37 73.14 6 A ASN 7 53.47 82.79 6 A GLU 10 -171.05 51.91 6 A ASP 11 55.91 85.98 6 A ARG 35 -118.23 63.56 7 A LYS 4 171.99 88.37 7 A ASN 7 164.15 -56.38 7 A GLU 10 59.64 72.15 7 A ASP 11 -175.33 98.10 7 A ALA 12 37.47 61.85 7 A ALA 14 -176.52 63.68 7 A GLU 15 -147.48 23.70 7 A ASP 16 176.73 -40.49 7 A LEU 30 -154.96 35.31 7 A GLN 34 -142.17 54.27 8 A ASN 7 -35.91 100.06 8 A GLU 10 59.77 175.12 8 A ASP 11 78.52 -62.63 8 A ALA 12 -173.66 75.19 8 A ALA 14 70.55 48.47 8 A ASP 16 -64.15 -71.12 8 A LEU 30 -154.67 47.17 8 A PRO 32 -71.47 -164.26 9 A SER 3 -124.53 -53.17 9 A LYS 4 72.98 94.09 9 A ASP 6 63.19 108.33 9 A ALA 12 178.81 91.02 9 A ARG 35 -103.59 54.88 10 A ASN 7 -174.19 91.24 10 A ASP 11 37.86 68.87 10 A ALA 12 -179.48 -57.48 10 A ALA 14 -167.85 61.50 10 A ALA 31 -163.43 85.56 10 A GLN 34 -172.48 79.01 11 A ASN 7 160.63 -54.90 11 A GLU 10 179.54 51.97 11 A ASP 11 176.64 -50.84 11 A ALA 12 175.61 72.92 11 A ALA 14 -173.66 57.41 11 A ALA 31 -46.21 154.96 11 A ARG 35 38.92 48.67 12 A ASP 6 66.05 107.83 12 A GLU 10 62.85 162.21 12 A ASP 11 55.10 92.80 12 A ALA 12 44.58 72.25 12 A ALA 14 77.22 53.38 12 A LEU 30 -154.30 33.49 13 A SER 3 -174.57 141.40 13 A ASP 6 -168.45 -58.52 13 A ASN 7 50.11 85.17 13 A GLU 10 167.82 161.38 13 A ASP 11 53.21 -179.41 13 A ALA 12 -55.84 106.16 13 A ASP 16 -175.27 -44.04 13 A ARG 19 -64.52 -71.46 13 A LEU 30 -154.33 39.61 14 A ASN 7 158.52 -56.56 14 A ALA 12 -165.78 107.86 14 A ASP 16 -56.09 -70.32 14 A ARG 33 58.06 109.18 14 A GLN 34 -155.00 63.11 15 A ASP 6 49.40 -174.55 15 A GLU 10 -176.52 130.65 15 A ASP 11 57.44 172.34 15 A ALA 12 -57.06 109.69 15 A ALA 14 -168.60 59.81 15 A ARG 19 -69.01 -72.99 15 A LEU 30 -155.84 40.92 15 A GLN 34 74.88 78.91 15 A ARG 35 -112.58 -95.36 16 A PRO 2 -79.39 -71.23 16 A LYS 4 173.57 -56.83 16 A GLU 10 -177.54 69.48 16 A ASP 11 -179.77 -73.45 16 A ALA 12 -165.55 66.24 16 A ALA 14 -164.82 -69.54 16 A ALA 31 -172.14 -59.72 16 A GLN 34 -171.23 79.00 17 A LYS 4 -33.91 97.20 17 A ASP 6 -174.79 -52.95 17 A ASN 7 178.15 126.99 17 A PRO 8 -66.37 -174.25 17 A ASP 11 76.99 -60.49 17 A ALA 12 -174.56 84.33 17 A ALA 14 -178.33 54.32 17 A ARG 19 -68.79 -78.78 17 A LEU 30 -156.62 24.90 17 A ALA 31 -170.94 85.17 17 A ARG 33 -173.54 96.87 17 A GLN 34 64.46 70.51 17 A ARG 35 -114.10 57.50 [ALA31,PRO32]-PNPY BOUND TO DPC MICELLES 1 N N A GLU 15 A GLU 15 HELX_P A ASN 29 A ASN 29 1 1 15 covale 1.330 both A TYR 36 A C TYR 36 1_555 A NH2 37 A N NH2 37 1_555 HORMONE/GROWTH FACTOR Y5 Receptor selective NPY mutant, HORMONE-GROWTH FACTOR COMPLEX NEUY_PIG UNP 1 1 P01304 YPSKPDNPGEDAPAEDLARYYSALRHYINLITRQRY 1 36 1ICY 1 36 P01304 A 1 1 36 1 ILE engineered mutation ALA 31 1ICY A P01304 UNP 31 31 1 THR engineered mutation PRO 32 1ICY A P01304 UNP 32 32 BINDING SITE FOR RESIDUE NH2 A 37 A NH2 37 Software 1 A TYR 36 A TYR 36 1 1_555