0.022252
0.000000
0.000000
0.000000
0.019448
0.000000
0.000000
0.000000
0.007546
0.00000
0.00000
0.00000
Tocchini-Valentini, G.
Rochel, N.
Wurtz, J.M.
Mitschler, A.
Moras, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.0
90.0
90.0
44.94
51.42
132.52
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C27 H44 O3
416.636
5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL
1,25 DIHYDROXY VITAMIN D3
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
O
N
392
N
O
N
393
S
C
N
394
N
C
N
395
R
C
N
396
N
C
N
397
N
C
N
398
N
C
N
399
N
C
N
400
N
C
N
401
N
C
N
402
N
C
N
403
N
C
N
404
N
C
N
405
R
C
N
406
S
C
N
407
N
C
N
408
N
C
N
409
R
C
N
410
N
C
N
411
N
C
N
412
R
C
N
413
N
C
N
414
N
C
N
415
N
C
N
416
N
C
N
417
N
C
N
418
N
C
N
419
N
C
N
420
N
O
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
Z
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
E
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
doub
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
98
5491
5496
10.1073/pnas.091018698
11344298
Crystal structures of the vitamin D receptor complexed to superagonist 20-epi ligands.
2001
10.2210/pdb1ie9/pdb
pdb_00001ie9
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.0
BW7B
EMBL/DESY, HAMBURG
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE BW7B
29391.871
VITAMIN D3 RECEPTOR
1
man
polymer
416.636
5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL
1
syn
non-polymer
18.015
water
225
nat
water
1,25-DIHYDROXYVITAMIN D3 RECEPTOR
no
no
DSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMI
PGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEE
EHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQP
ECSMKLTPLVLEVFGNEIS
DSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMI
PGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEE
EHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQP
ECSMKLTPLVLEVFGNEIS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
1
47
9606
Homo sapiens
562
Escherichia coli
human
Homo
Escherichia
sample
48
259
9606
Homo sapiens
562
Escherichia coli
1
2.60
52.75
VAPOR DIFFUSION, HANGING DROP
6.0
Ammonium Sulfate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
entity_src_gen
software
chem_comp_atom
chem_comp_bond
database_2
diffrn_source
struct_site
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Source and taxonomy
Data collection
Database references
Derived calculations
1
0
2001-05-16
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-08-16
1
4
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Crystal Structure Of The Nuclear Receptor For Vitamin D Complexed To Vitamin D
Crystal Structure Of The Nuclear Receptor For Vitamin D Ligand Binding Domain Bound to KH1060
RCSB
Y
RCSB
2001-04-09
REL
REL
VDX
5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL
HOH
water
MC
500
2
VDX
VDX
500
A
TIP
1
3
HOH
HOH
501
A
TIP
2
3
HOH
HOH
502
A
TIP
3
3
HOH
HOH
503
A
TIP
4
3
HOH
HOH
504
A
TIP
5
3
HOH
HOH
505
A
TIP
6
3
HOH
HOH
506
A
TIP
7
3
HOH
HOH
507
A
TIP
8
3
HOH
HOH
508
A
TIP
9
3
HOH
HOH
509
A
TIP
10
3
HOH
HOH
510
A
TIP
11
3
HOH
HOH
511
A
TIP
12
3
HOH
HOH
512
A
TIP
13
3
HOH
HOH
513
A
TIP
14
3
HOH
HOH
514
A
TIP
15
3
HOH
HOH
515
A
TIP
16
3
HOH
HOH
516
A
TIP
17
3
HOH
HOH
517
A
TIP
18
3
HOH
HOH
518
A
TIP
19
3
HOH
HOH
519
A
TIP
20
3
HOH
HOH
520
A
TIP
21
3
HOH
HOH
521
A
TIP
22
3
HOH
HOH
522
A
TIP
23
3
HOH
HOH
523
A
TIP
24
3
HOH
HOH
524
A
TIP
25
3
HOH
HOH
525
A
TIP
26
3
HOH
HOH
526
A
TIP
27
3
HOH
HOH
527
A
TIP
28
3
HOH
HOH
528
A
TIP
29
3
HOH
HOH
529
A
TIP
30
3
HOH
HOH
530
A
TIP
31
3
HOH
HOH
531
A
TIP
32
3
HOH
HOH
532
A
TIP
33
3
HOH
HOH
533
A
TIP
34
3
HOH
HOH
534
A
TIP
35
3
HOH
HOH
535
A
TIP
36
3
HOH
HOH
536
A
TIP
37
3
HOH
HOH
537
A
TIP
38
3
HOH
HOH
538
A
TIP
39
3
HOH
HOH
539
A
TIP
40
3
HOH
HOH
540
A
TIP
41
3
HOH
HOH
541
A
TIP
42
3
HOH
HOH
542
A
TIP
43
3
HOH
HOH
543
A
TIP
44
3
HOH
HOH
544
A
TIP
45
3
HOH
HOH
545
A
TIP
46
3
HOH
HOH
546
A
TIP
47
3
HOH
HOH
547
A
TIP
48
3
HOH
HOH
548
A
TIP
49
3
HOH
HOH
549
A
TIP
50
3
HOH
HOH
550
A
TIP
51
3
HOH
HOH
551
A
TIP
52
3
HOH
HOH
552
A
TIP
53
3
HOH
HOH
553
A
TIP
54
3
HOH
HOH
554
A
TIP
55
3
HOH
HOH
555
A
TIP
56
3
HOH
HOH
556
A
TIP
57
3
HOH
HOH
557
A
TIP
58
3
HOH
HOH
558
A
TIP
59
3
HOH
HOH
559
A
TIP
60
3
HOH
HOH
560
A
TIP
61
3
HOH
HOH
561
A
TIP
62
3
HOH
HOH
562
A
TIP
63
3
HOH
HOH
563
A
TIP
64
3
HOH
HOH
564
A
TIP
65
3
HOH
HOH
565
A
TIP
66
3
HOH
HOH
566
A
TIP
67
3
HOH
HOH
567
A
TIP
68
3
HOH
HOH
568
A
TIP
69
3
HOH
HOH
569
A
TIP
70
3
HOH
HOH
570
A
TIP
71
3
HOH
HOH
571
A
TIP
72
3
HOH
HOH
572
A
TIP
73
3
HOH
HOH
573
A
TIP
74
3
HOH
HOH
574
A
TIP
75
3
HOH
HOH
575
A
TIP
76
3
HOH
HOH
576
A
TIP
77
3
HOH
HOH
577
A
TIP
78
3
HOH
HOH
578
A
TIP
79
3
HOH
HOH
579
A
TIP
80
3
HOH
HOH
580
A
TIP
81
3
HOH
HOH
581
A
TIP
82
3
HOH
HOH
582
A
TIP
83
3
HOH
HOH
583
A
TIP
84
3
HOH
HOH
584
A
TIP
85
3
HOH
HOH
585
A
TIP
86
3
HOH
HOH
586
A
TIP
87
3
HOH
HOH
587
A
TIP
88
3
HOH
HOH
588
A
TIP
89
3
HOH
HOH
589
A
TIP
90
3
HOH
HOH
590
A
TIP
91
3
HOH
HOH
591
A
TIP
92
3
HOH
HOH
592
A
TIP
93
3
HOH
HOH
593
A
TIP
94
3
HOH
HOH
594
A
TIP
95
3
HOH
HOH
595
A
TIP
96
3
HOH
HOH
596
A
TIP
97
3
HOH
HOH
597
A
TIP
98
3
HOH
HOH
598
A
TIP
99
3
HOH
HOH
599
A
TIP
100
3
HOH
HOH
600
A
TIP
101
3
HOH
HOH
601
A
TIP
102
3
HOH
HOH
602
A
TIP
103
3
HOH
HOH
603
A
TIP
104
3
HOH
HOH
604
A
TIP
105
3
HOH
HOH
605
A
TIP
106
3
HOH
HOH
606
A
TIP
107
3
HOH
HOH
607
A
TIP
108
3
HOH
HOH
608
A
TIP
109
3
HOH
HOH
609
A
TIP
110
3
HOH
HOH
610
A
TIP
111
3
HOH
HOH
611
A
TIP
112
3
HOH
HOH
612
A
TIP
113
3
HOH
HOH
613
A
TIP
114
3
HOH
HOH
614
A
TIP
115
3
HOH
HOH
615
A
TIP
116
3
HOH
HOH
616
A
TIP
117
3
HOH
HOH
617
A
TIP
118
3
HOH
HOH
618
A
TIP
119
3
HOH
HOH
619
A
TIP
120
3
HOH
HOH
620
A
TIP
121
3
HOH
HOH
621
A
TIP
122
3
HOH
HOH
622
A
TIP
123
3
HOH
HOH
623
A
TIP
124
3
HOH
HOH
624
A
TIP
125
3
HOH
HOH
625
A
TIP
126
3
HOH
HOH
626
A
TIP
127
3
HOH
HOH
627
A
TIP
128
3
HOH
HOH
628
A
TIP
129
3
HOH
HOH
629
A
TIP
130
3
HOH
HOH
630
A
TIP
131
3
HOH
HOH
631
A
TIP
132
3
HOH
HOH
632
A
TIP
133
3
HOH
HOH
633
A
TIP
134
3
HOH
HOH
634
A
TIP
135
3
HOH
HOH
635
A
TIP
136
3
HOH
HOH
636
A
TIP
137
3
HOH
HOH
637
A
TIP
138
3
HOH
HOH
638
A
TIP
139
3
HOH
HOH
639
A
TIP
140
3
HOH
HOH
640
A
TIP
141
3
HOH
HOH
641
A
TIP
142
3
HOH
HOH
642
A
TIP
143
3
HOH
HOH
643
A
TIP
144
3
HOH
HOH
644
A
TIP
145
3
HOH
HOH
645
A
TIP
146
3
HOH
HOH
646
A
TIP
147
3
HOH
HOH
647
A
TIP
148
3
HOH
HOH
648
A
TIP
149
3
HOH
HOH
649
A
TIP
150
3
HOH
HOH
650
A
TIP
151
3
HOH
HOH
651
A
TIP
152
3
HOH
HOH
652
A
TIP
153
3
HOH
HOH
653
A
TIP
154
3
HOH
HOH
654
A
TIP
155
3
HOH
HOH
655
A
TIP
156
3
HOH
HOH
656
A
TIP
157
3
HOH
HOH
657
A
TIP
158
3
HOH
HOH
658
A
TIP
159
3
HOH
HOH
659
A
TIP
160
3
HOH
HOH
660
A
TIP
161
3
HOH
HOH
661
A
TIP
162
3
HOH
HOH
662
A
TIP
163
3
HOH
HOH
663
A
TIP
164
3
HOH
HOH
664
A
TIP
165
3
HOH
HOH
665
A
TIP
166
3
HOH
HOH
666
A
TIP
167
3
HOH
HOH
667
A
TIP
168
3
HOH
HOH
668
A
TIP
169
3
HOH
HOH
669
A
TIP
170
3
HOH
HOH
670
A
TIP
171
3
HOH
HOH
671
A
TIP
172
3
HOH
HOH
672
A
TIP
173
3
HOH
HOH
673
A
TIP
174
3
HOH
HOH
674
A
TIP
175
3
HOH
HOH
675
A
TIP
176
3
HOH
HOH
676
A
TIP
177
3
HOH
HOH
677
A
TIP
178
3
HOH
HOH
678
A
TIP
179
3
HOH
HOH
679
A
TIP
180
3
HOH
HOH
680
A
TIP
181
3
HOH
HOH
681
A
TIP
182
3
HOH
HOH
682
A
TIP
183
3
HOH
HOH
683
A
TIP
184
3
HOH
HOH
684
A
TIP
185
3
HOH
HOH
685
A
TIP
186
3
HOH
HOH
686
A
TIP
187
3
HOH
HOH
687
A
TIP
188
3
HOH
HOH
688
A
TIP
189
3
HOH
HOH
689
A
TIP
190
3
HOH
HOH
690
A
TIP
191
3
HOH
HOH
691
A
TIP
192
3
HOH
HOH
692
A
TIP
193
3
HOH
HOH
693
A
TIP
194
3
HOH
HOH
694
A
TIP
195
3
HOH
HOH
695
A
TIP
196
3
HOH
HOH
696
A
TIP
197
3
HOH
HOH
697
A
TIP
198
3
HOH
HOH
698
A
TIP
199
3
HOH
HOH
699
A
TIP
200
3
HOH
HOH
700
A
TIP
201
3
HOH
HOH
701
A
TIP
202
3
HOH
HOH
702
A
TIP
203
3
HOH
HOH
703
A
TIP
204
3
HOH
HOH
704
A
TIP
205
3
HOH
HOH
705
A
TIP
206
3
HOH
HOH
706
A
TIP
207
3
HOH
HOH
707
A
TIP
208
3
HOH
HOH
708
A
TIP
209
3
HOH
HOH
709
A
TIP
210
3
HOH
HOH
710
A
TIP
211
3
HOH
HOH
711
A
TIP
212
3
HOH
HOH
712
A
TIP
213
3
HOH
HOH
713
A
TIP
214
3
HOH
HOH
714
A
TIP
215
3
HOH
HOH
715
A
TIP
216
3
HOH
HOH
716
A
TIP
217
3
HOH
HOH
717
A
TIP
218
3
HOH
HOH
718
A
TIP
219
3
HOH
HOH
719
A
TIP
220
3
HOH
HOH
720
A
TIP
221
3
HOH
HOH
721
A
TIP
222
3
HOH
HOH
722
A
TIP
223
3
HOH
HOH
723
A
TIP
224
3
HOH
HOH
724
A
TIP
225
3
HOH
HOH
725
A
GLU
118
n
1
ASP
118
A
SER
119
n
2
SER
119
A
LEU
120
n
3
LEU
120
A
ARG
121
n
4
ARG
121
A
PRO
122
n
5
PRO
122
A
LYS
123
n
6
LYS
123
A
LEU
124
n
7
LEU
124
A
SER
125
n
8
SER
125
A
GLU
126
n
9
GLU
126
A
GLU
127
n
10
GLU
127
A
GLN
128
n
11
GLN
128
A
GLN
129
n
12
GLN
129
A
ARG
130
n
13
ARG
130
A
ILE
131
n
14
ILE
131
A
ILE
132
n
15
ILE
132
A
ALA
133
n
16
ALA
133
A
ILE
134
n
17
ILE
134
A
LEU
135
n
18
LEU
135
A
LEU
136
n
19
LEU
136
A
ASP
137
n
20
ASP
137
A
ALA
138
n
21
ALA
138
A
HIS
139
n
22
HIS
139
A
HIS
140
n
23
HIS
140
A
LYS
141
n
24
LYS
141
A
THR
142
n
25
THR
142
A
TYR
143
n
26
TYR
143
A
ASP
144
n
27
ASP
144
A
PRO
145
n
28
PRO
145
A
THR
146
n
29
THR
146
A
TYR
147
n
30
TYR
147
A
SER
148
n
31
SER
148
A
ASP
149
n
32
ASP
149
A
PHE
150
n
33
PHE
150
A
CYS
151
n
34
CYS
151
A
GLN
152
n
35
GLN
152
A
PHE
153
n
36
PHE
153
A
ARG
154
n
37
ARG
154
A
PRO
155
n
38
PRO
155
A
PRO
156
n
39
PRO
156
A
VAL
157
n
40
VAL
157
A
ARG
158
n
41
ARG
158
A
VAL
159
n
42
VAL
159
A
ASN
160
n
43
ASN
160
A
ASP
161
n
44
ASP
161
A
GLY
162
n
45
GLY
162
A
GLY
163
n
46
GLY
163
A
GLY
164
n
47
GLY
164
A
SER
216
n
48
SER
216
A
VAL
217
n
49
VAL
217
A
THR
218
n
50
THR
218
A
LEU
219
n
51
LEU
219
A
GLU
220
n
52
GLU
220
A
LEU
221
n
53
LEU
221
A
SER
222
n
54
SER
222
A
GLN
223
n
55
GLN
223
A
LEU
224
n
56
LEU
224
A
SER
225
n
57
SER
225
A
MET
226
n
58
MET
226
A
LEU
227
n
59
LEU
227
A
PRO
228
n
60
PRO
228
A
HIS
229
n
61
HIS
229
A
LEU
230
n
62
LEU
230
A
ALA
231
n
63
ALA
231
A
ASP
232
n
64
ASP
232
A
LEU
233
n
65
LEU
233
A
VAL
234
n
66
VAL
234
A
SER
235
n
67
SER
235
A
TYR
236
n
68
TYR
236
A
SER
237
n
69
SER
237
A
ILE
238
n
70
ILE
238
A
GLN
239
n
71
GLN
239
A
LYS
240
n
72
LYS
240
A
VAL
241
n
73
VAL
241
A
ILE
242
n
74
ILE
242
A
GLY
243
n
75
GLY
243
A
PHE
244
n
76
PHE
244
A
ALA
245
n
77
ALA
245
A
LYS
246
n
78
LYS
246
A
MET
247
n
79
MET
247
A
ILE
248
n
80
ILE
248
A
PRO
249
n
81
PRO
249
A
GLY
250
n
82
GLY
250
A
PHE
251
n
83
PHE
251
A
ARG
252
n
84
ARG
252
A
ASP
253
n
85
ASP
253
A
LEU
254
n
86
LEU
254
A
THR
255
n
87
THR
255
A
SER
256
n
88
SER
256
A
GLU
257
n
89
GLU
257
A
ASP
258
n
90
ASP
258
A
GLN
259
n
91
GLN
259
A
ILE
260
n
92
ILE
260
A
VAL
261
n
93
VAL
261
A
LEU
262
n
94
LEU
262
A
LEU
263
n
95
LEU
263
A
LYS
264
n
96
LYS
264
A
SER
265
n
97
SER
265
A
SER
266
n
98
SER
266
A
ALA
267
n
99
ALA
267
A
ILE
268
n
100
ILE
268
A
GLU
269
n
101
GLU
269
A
VAL
270
n
102
VAL
270
A
ILE
271
n
103
ILE
271
A
MET
272
n
104
MET
272
A
LEU
273
n
105
LEU
273
A
ARG
274
n
106
ARG
274
A
SER
275
n
107
SER
275
A
ASN
276
n
108
ASN
276
A
GLU
277
n
109
GLU
277
A
SER
278
n
110
SER
278
A
PHE
279
n
111
PHE
279
A
THR
280
n
112
THR
280
A
MET
281
n
113
MET
281
A
ASP
282
n
114
ASP
282
A
ASP
283
n
115
ASP
283
A
MET
284
n
116
MET
284
A
SER
285
n
117
SER
285
A
TRP
286
n
118
TRP
286
A
THR
287
n
119
THR
287
A
CYS
288
n
120
CYS
288
A
GLY
289
n
121
GLY
289
A
ASN
290
n
122
ASN
290
A
GLN
291
n
123
GLN
291
A
ASP
292
n
124
ASP
292
A
TYR
293
n
125
TYR
293
A
LYS
294
n
126
LYS
294
A
TYR
295
n
127
TYR
295
A
ARG
296
n
128
ARG
296
A
VAL
297
n
129
VAL
297
A
SER
298
n
130
SER
298
A
ASP
299
n
131
ASP
299
A
VAL
300
n
132
VAL
300
A
THR
301
n
133
THR
301
A
LYS
302
n
134
LYS
302
A
ALA
303
n
135
ALA
303
A
GLY
304
n
136
GLY
304
A
HIS
305
n
137
HIS
305
A
SER
306
n
138
SER
306
A
LEU
307
n
139
LEU
307
A
GLU
308
n
140
GLU
308
A
LEU
309
n
141
LEU
309
A
ILE
310
n
142
ILE
310
A
GLU
311
n
143
GLU
311
A
PRO
312
n
144
PRO
312
A
LEU
313
n
145
LEU
313
A
ILE
314
n
146
ILE
314
A
LYS
315
n
147
LYS
315
A
PHE
316
n
148
PHE
316
A
GLN
317
n
149
GLN
317
A
VAL
318
n
150
VAL
318
A
GLY
319
n
151
GLY
319
A
LEU
320
n
152
LEU
320
A
LYS
321
n
153
LYS
321
A
LYS
322
n
154
LYS
322
A
LEU
323
n
155
LEU
323
A
ASN
324
n
156
ASN
324
A
LEU
325
n
157
LEU
325
A
HIS
326
n
158
HIS
326
A
GLU
327
n
159
GLU
327
A
GLU
328
n
160
GLU
328
A
GLU
329
n
161
GLU
329
A
HIS
330
n
162
HIS
330
A
VAL
331
n
163
VAL
331
A
LEU
332
n
164
LEU
332
A
LEU
333
n
165
LEU
333
A
MET
334
n
166
MET
334
A
ALA
335
n
167
ALA
335
A
ILE
336
n
168
ILE
336
A
CYS
337
n
169
CYS
337
A
ILE
338
n
170
ILE
338
A
VAL
339
n
171
VAL
339
A
SER
340
n
172
SER
340
A
PRO
341
n
173
PRO
341
A
ASP
342
n
174
ASP
342
A
ARG
343
n
175
ARG
343
A
PRO
344
n
176
PRO
344
A
GLY
345
n
177
GLY
345
A
VAL
346
n
178
VAL
346
A
GLN
347
n
179
GLN
347
A
ASP
348
n
180
ASP
348
A
ALA
349
n
181
ALA
349
A
ALA
350
n
182
ALA
350
A
LEU
351
n
183
LEU
351
A
ILE
352
n
184
ILE
352
A
GLU
353
n
185
GLU
353
A
ALA
354
n
186
ALA
354
A
ILE
355
n
187
ILE
355
A
GLN
356
n
188
GLN
356
A
ASP
357
n
189
ASP
357
A
ARG
358
n
190
ARG
358
A
LEU
359
n
191
LEU
359
A
SER
360
n
192
SER
360
A
ASN
361
n
193
ASN
361
A
THR
362
n
194
THR
362
A
LEU
363
n
195
LEU
363
A
GLN
364
n
196
GLN
364
A
THR
365
n
197
THR
365
A
TYR
366
n
198
TYR
366
A
ILE
367
n
199
ILE
367
A
ARG
368
n
200
ARG
368
A
CYS
369
n
201
CYS
369
A
ARG
370
n
202
ARG
370
A
HIS
371
n
203
HIS
371
A
PRO
372
n
204
PRO
372
A
PRO
373
n
205
PRO
373
A
PRO
374
n
206
PRO
374
A
GLY
375
n
207
GLY
375
A
SER
376
n
208
SER
376
A
ALA
377
n
209
HIS
377
A
LEU
378
n
210
LEU
378
A
LEU
379
n
211
LEU
379
A
TYR
380
n
212
TYR
380
A
ALA
381
n
213
ALA
381
A
LYS
382
n
214
LYS
382
A
MET
383
n
215
MET
383
A
ILE
384
n
216
ILE
384
A
GLN
385
n
217
GLN
385
A
LYS
386
n
218
LYS
386
A
LEU
387
n
219
LEU
387
A
ALA
388
n
220
ALA
388
A
ASP
389
n
221
ASP
389
A
LEU
390
n
222
LEU
390
A
ARG
391
n
223
ARG
391
A
SER
392
n
224
SER
392
A
LEU
393
n
225
LEU
393
A
ASN
394
n
226
ASN
394
A
GLU
395
n
227
GLU
395
A
GLU
396
n
228
GLU
396
A
HIS
397
n
229
HIS
397
A
SER
398
n
230
SER
398
A
LYS
399
n
231
LYS
399
A
GLN
400
n
232
GLN
400
A
TYR
401
n
233
TYR
401
A
ARG
402
n
234
ARG
402
A
CYS
403
n
235
CYS
403
A
LEU
404
n
236
LEU
404
A
SER
405
n
237
SER
405
A
PHE
406
n
238
PHE
406
A
GLN
407
n
239
GLN
407
A
PRO
408
n
240
PRO
408
A
GLU
409
n
241
GLU
409
A
CYS
410
n
242
CYS
410
A
SER
411
n
243
SER
411
A
MET
412
n
244
MET
412
A
LYS
413
n
245
LYS
413
A
LEU
414
n
246
LEU
414
A
THR
415
n
247
THR
415
A
PRO
416
n
248
PRO
416
A
LEU
417
n
249
LEU
417
A
VAL
418
n
250
VAL
418
A
LEU
419
n
251
LEU
419
A
GLU
420
n
252
GLU
420
A
VAL
421
n
253
VAL
421
A
PHE
422
n
254
PHE
422
A
GLY
423
n
255
GLY
423
A
n
256
424
A
n
257
425
A
n
258
426
A
n
259
427
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
280
A
N
THR
112
A
O
SER
285
A
O
SER
117
A
O
TRP
286
A
O
TRP
118
A
N
TYR
295
A
N
TYR
127
1
A
CG
HIS
377
A
CG
HIS
209
1
Y
1
A
ND1
HIS
377
A
ND1
HIS
209
1
Y
1
A
CD2
HIS
377
A
CD2
HIS
209
1
Y
1
A
CE1
HIS
377
A
CE1
HIS
209
1
Y
1
A
NE2
HIS
377
A
NE2
HIS
209
1
Y
1
A
ASN
424
A
ASN
256
1
Y
1
A
GLU
425
A
GLU
257
1
Y
1
A
ILE
426
A
ILE
258
1
Y
1
A
SER
427
A
SER
259
1
Y
1
A
C20
VDX
500
WRONG HAND
1
A
ASP
118
0.372
SIDE CHAIN
1
-68.52
1.90
123.30
54.78
A
A
A
OD1
CG
OD2
ASP
ASP
ASP
118
118
118
N
1
-18.94
0.90
118.30
99.36
A
A
A
CB
CG
OD1
ASP
ASP
ASP
118
118
118
N
1
A
A
CG
OD1
ASP
ASP
118
118
1.144
0.023
1.249
2.393
N
1
A
A
CG
OD2
ASP
ASP
118
118
1.148
0.023
1.249
2.397
N
1
A
SER
119
-30.29
113.96
1
A
ASP
161
-150.49
46.70
1
A
ASP
283
-140.70
13.97
1
A
GLN
347
-94.52
-67.82
1
A
LEU
414
-102.69
-153.86
0.2480000
0.2140000
1.4
6.0
4256
42311
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
Engh & Huber
1.4
6.0
225
2276
30
0
2021
1.6
0.011
1.4
15.0
1IE9
42311
0.2360000
1
23.4
3.6
73.4
0.2360000
1.4
1.43
81.1
refinement
CNS
data reduction
DENZO
data scaling
CCP4
(TRUNCATE)
phasing
CNS
Crystal Structure Of The Nuclear Receptor For Vitamin D Ligand Binding Domain Bound to MC1288
1
N
N
2
N
N
3
N
N
A
SER
125
A
SER
8
HELX_P
A
TYR
143
A
TYR
26
1
1
19
A
ASP
149
A
ASP
32
HELX_P
A
PHE
153
A
PHE
36
5
2
5
A
SER
216
A
SER
48
HELX_P
A
LEU
224
A
LEU
56
1
3
9
A
MET
226
A
MET
58
HELX_P
A
MET
247
A
MET
79
1
4
22
A
GLY
250
A
GLY
82
HELX_P
A
LEU
254
A
LEU
86
5
5
5
A
THR
255
A
THR
87
HELX_P
A
SER
275
A
SER
107
1
6
21
A
ASN
290
A
ASN
122
HELX_P
A
ASP
292
A
ASP
124
5
7
3
A
ARG
296
A
ARG
128
HELX_P
A
LYS
302
A
LYS
134
1
8
7
A
SER
306
A
SER
138
HELX_P
A
LYS
322
A
LYS
154
1
9
17
A
HIS
326
A
HIS
158
HELX_P
A
VAL
339
A
VAL
171
1
10
14
A
ASP
348
A
ASP
180
HELX_P
A
HIS
371
A
HIS
203
1
11
24
A
LEU
378
A
LEU
210
HELX_P
A
SER
405
A
SER
237
1
12
28
A
GLU
409
A
GLU
241
HELX_P
A
LEU
414
A
LEU
246
1
13
6
A
THR
415
A
THR
247
HELX_P
A
GLY
423
A
GLY
255
1
14
9
GENE REGULATION
vdr, MC1288, GENE REGULATION
A
PRO
373
A
PRO
205
1
A
PRO
374
A
PRO
206
0.00
VDR_HUMAN
UNP
1
118
P11473
DSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGG
VDR_HUMAN
UNP
1
216
P11473
SVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKY
RVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPG
SHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPECSMKLTPLVLEVFGNEIS
118
164
1IE9
118
164
P11473
A
1
1
47
216
427
1IE9
216
427
P11473
A
2
48
259
3
anti-parallel
anti-parallel
A
PHE
279
A
PHE
111
A
THR
280
A
THR
112
A
SER
285
A
SER
117
A
THR
287
A
THR
119
A
LYS
294
A
LYS
126
A
TYR
295
A
TYR
127
BINDING SITE FOR RESIDUE VDX A 500
A
VDX
500
Software
13
A
TYR
143
A
TYR
26
13
1_555
A
TYR
147
A
TYR
30
13
1_555
A
LEU
227
A
LEU
59
13
1_555
A
LEU
233
A
LEU
65
13
1_555
A
VAL
234
A
VAL
66
13
1_555
A
SER
237
A
SER
69
13
1_555
A
ARG
274
A
ARG
106
13
1_555
A
SER
275
A
SER
107
13
1_555
A
SER
278
A
SER
110
13
1_555
A
TRP
286
A
TRP
118
13
1_555
A
CYS
288
A
CYS
120
13
1_555
A
HIS
305
A
HIS
137
13
1_555
A
HIS
397
A
HIS
229
13
1_555
19
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