0.013680
0.000000
0.000000
0.000000
0.009625
0.000000
0.000000
0.000000
0.014925
0.00000
0.00000
0.00000
CIS PROLINE - PRO L 8
CIS PROLINE - PRO L 95
CIS PROLINE - PRO L 141
ARG L 211 - ASN L 212 OMEGA ANGLE = 0.020 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION
CIS PROLINE - PRO H 149
CIS PROLINE - PRO H 151
CIS PROLINE - PRO H 200
Schulze-Gahmen, U.
Wilson, I.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
73.100
103.900
67.000
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
C
N
4
N
H
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
C
N
28
N
N
N
29
N
C
N
30
N
N
N
31
N
N
N
32
N
O
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
O
N
72
N
O
N
73
N
O
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
N
N
82
R
C
N
83
N
C
N
84
N
O
N
85
N
C
N
86
N
S
N
87
N
O
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
N
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
N
N
116
S
C
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
C
N
121
N
C
N
122
N
O
N
123
N
O
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
N
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
N
C
Y
149
N
C
Y
150
N
N
Y
151
N
C
Y
152
N
C
Y
153
N
N
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
N
N
169
S
C
N
170
N
C
N
171
N
O
N
172
S
C
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
N
N
191
S
C
N
192
N
C
N
193
N
O
N
194
N
C
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
O
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
N
217
N
C
N
218
N
C
N
219
N
C
N
220
N
N
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
N
S
N
244
N
C
N
245
N
O
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
N
N
258
S
C
N
259
N
C
N
260
N
O
N
261
N
C
Y
262
N
C
Y
263
N
C
Y
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
N
C
N
302
N
O
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
N
N
312
S
C
N
313
N
C
N
314
N
O
N
315
R
C
N
316
N
O
N
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
N
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
N
342
N
O
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
N
366
N
O
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
N
N
380
S
C
N
381
N
C
N
382
N
O
N
383
N
C
N
384
N
C
N
385
N
C
N
386
N
O
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
Y
146
N
sing
Y
147
N
doub
Y
148
N
doub
N
149
N
sing
Y
150
N
sing
N
151
N
sing
Y
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
doub
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
Y
254
N
doub
Y
255
N
sing
Y
256
N
sing
N
257
N
sing
Y
258
N
doub
N
259
N
sing
Y
260
N
doub
N
261
N
sing
Y
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
Y
323
N
doub
Y
324
N
sing
Y
325
N
sing
N
326
N
sing
Y
327
N
doub
Y
328
N
sing
Y
329
N
sing
N
330
N
sing
Y
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
Y
351
N
doub
Y
352
N
sing
Y
353
N
sing
N
354
N
sing
Y
355
N
doub
N
356
N
sing
Y
357
N
doub
N
358
N
sing
Y
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
doub
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
234
1098
1118
10.1006/jmbi.1993.1663
8263915
Detailed analysis of the free and bound conformations of an antibody. X-ray structures of Fab 17/9 and three different Fab-peptide complexes.
1993
US
Science
SCIEAS
0038
0036-8075
255
959
Structural Evidence for Induced Fit as a Mechanism for Antibody-Antigen Recognition
1992
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
263
17100
Preliminary Crystallographic Data, Primary Sequence, and Binding Data for an Anti-Peptide Fab and its Complex with a Synthetic Peptide from Influenza Virus Hemagglutinin
1988
10.2210/pdb1ifh/pdb
pdb_00001ifh
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
24025.471
IGG2A-KAPPA 17/9 FAB (LIGHT CHAIN)
1
man
polymer
23677.441
IGG2A-KAPPA 17/9 FAB (HEAVY CHAIN)
1
man
polymer
791.804
INFLUENZA HEMAGGLUTININ HA1 (STRAIN X47) (RESIDUES 101-107)
1
man
polymer
18.015
water
1
nat
water
no
no
DIVMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTRESGVPDRFTGSGSGTDFTLT
ISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE
RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
DIVMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTRESGVPDRFTGSGSGTDFTLT
ISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE
RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
L
polypeptide(L)
no
no
EVQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGRFTISRDNAKNTLY
LQMSSLKSEDSAMYYCARRERYDENGFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLT
WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
EVQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGRFTISRDNAKNTLY
LQMSSLKSEDSAMYYCARRERYDENGFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLT
WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
H
polypeptide(L)
no
yes
(ACE)DVPDYAS
XDVPDYAS
P
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
A/J
sample
10090
Mus musculus
house mouse
A/J
sample
10090
Mus musculus
2.62
53.09
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
struct_conn
struct_ref_seq_dif
struct_sheet
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Other
1
0
1993-10-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-06-05
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_sheet.number_strands
Y
BNL
1993-05-06
REL
REL
HOH
water
THERE IS ONE BOUND WATER MOLECULE IN THE BINDING SITE OF
THE FAB FRAGMENT.
HOH
1
4
HOH
HOH
229
H
ASP
1
n
1
ASP
1
L
ILE
2
n
2
ILE
2
L
VAL
3
n
3
VAL
3
L
MET
4
n
4
MET
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
SER
7
n
7
SER
7
L
PRO
8
n
8
PRO
8
L
SER
9
n
9
SER
9
L
SER
10
n
10
SER
10
L
LEU
11
n
11
LEU
11
L
THR
12
n
12
THR
12
L
VAL
13
n
13
VAL
13
L
THR
14
n
14
THR
14
L
ALA
15
n
15
ALA
15
L
GLY
16
n
16
GLY
16
L
GLU
17
n
17
GLU
17
L
LYS
18
n
18
LYS
18
L
VAL
19
n
19
VAL
19
L
THR
20
n
20
THR
20
L
MET
21
n
21
MET
21
L
SER
22
n
22
SER
22
L
CYS
23
n
23
CYS
23
L
THR
24
n
24
THR
24
L
SER
25
n
25
SER
25
L
SER
26
n
26
SER
26
L
GLN
27
n
27
GLN
27
L
SER
27
n
28
A
SER
27
L
LEU
27
n
29
B
LEU
27
L
PHE
27
n
30
C
PHE
27
L
ASN
27
n
31
D
ASN
27
L
SER
27
n
32
E
SER
27
L
GLY
27
n
33
F
GLY
27
L
LYS
28
n
34
LYS
28
L
GLN
29
n
35
GLN
29
L
LYS
30
n
36
LYS
30
L
ASN
31
n
37
ASN
31
L
TYR
32
n
38
TYR
32
L
LEU
33
n
39
LEU
33
L
THR
34
n
40
THR
34
L
TRP
35
n
41
TRP
35
L
TYR
36
n
42
TYR
36
L
GLN
37
n
43
GLN
37
L
GLN
38
n
44
GLN
38
L
LYS
39
n
45
LYS
39
L
PRO
40
n
46
PRO
40
L
GLY
41
n
47
GLY
41
L
GLN
42
n
48
GLN
42
L
PRO
43
n
49
PRO
43
L
PRO
44
n
50
PRO
44
L
LYS
45
n
51
LYS
45
L
VAL
46
n
52
VAL
46
L
LEU
47
n
53
LEU
47
L
ILE
48
n
54
ILE
48
L
TYR
49
n
55
TYR
49
L
TRP
50
n
56
TRP
50
L
ALA
51
n
57
ALA
51
L
SER
52
n
58
SER
52
L
THR
53
n
59
THR
53
L
ARG
54
n
60
ARG
54
L
GLU
55
n
61
GLU
55
L
SER
56
n
62
SER
56
L
GLY
57
n
63
GLY
57
L
VAL
58
n
64
VAL
58
L
PRO
59
n
65
PRO
59
L
ASP
60
n
66
ASP
60
L
ARG
61
n
67
ARG
61
L
PHE
62
n
68
PHE
62
L
THR
63
n
69
THR
63
L
GLY
64
n
70
GLY
64
L
SER
65
n
71
SER
65
L
GLY
66
n
72
GLY
66
L
SER
67
n
73
SER
67
L
GLY
68
n
74
GLY
68
L
THR
69
n
75
THR
69
L
ASP
70
n
76
ASP
70
L
PHE
71
n
77
PHE
71
L
THR
72
n
78
THR
72
L
LEU
73
n
79
LEU
73
L
THR
74
n
80
THR
74
L
ILE
75
n
81
ILE
75
L
SER
76
n
82
SER
76
L
SER
77
n
83
SER
77
L
VAL
78
n
84
VAL
78
L
GLN
79
n
85
GLN
79
L
ALA
80
n
86
ALA
80
L
GLU
81
n
87
GLU
81
L
ASP
82
n
88
ASP
82
L
LEU
83
n
89
LEU
83
L
ALA
84
n
90
ALA
84
L
VAL
85
n
91
VAL
85
L
TYR
86
n
92
TYR
86
L
TYR
87
n
93
TYR
87
L
CYS
88
n
94
CYS
88
L
GLN
89
n
95
GLN
89
L
ASN
90
n
96
ASN
90
L
ASP
91
n
97
ASP
91
L
TYR
92
n
98
TYR
92
L
SER
93
n
99
SER
93
L
ASN
94
n
100
ASN
94
L
PRO
95
n
101
PRO
95
L
LEU
96
n
102
LEU
96
L
THR
97
n
103
THR
97
L
PHE
98
n
104
PHE
98
L
GLY
99
n
105
GLY
99
L
GLY
100
n
106
GLY
100
L
GLY
101
n
107
GLY
101
L
THR
102
n
108
THR
102
L
LYS
103
n
109
LYS
103
L
LEU
104
n
110
LEU
104
L
GLU
105
n
111
GLU
105
L
LEU
106
n
112
LEU
106
L
LYS
107
n
113
LYS
107
L
ARG
108
n
114
ARG
108
L
ALA
109
n
115
ALA
109
L
ASP
110
n
116
ASP
110
L
ALA
111
n
117
ALA
111
L
ALA
112
n
118
ALA
112
L
PRO
113
n
119
PRO
113
L
THR
114
n
120
THR
114
L
VAL
115
n
121
VAL
115
L
SER
116
n
122
SER
116
L
ILE
117
n
123
ILE
117
L
PHE
118
n
124
PHE
118
L
PRO
119
n
125
PRO
119
L
PRO
120
n
126
PRO
120
L
SER
121
n
127
SER
121
L
SER
122
n
128
SER
122
L
GLU
123
n
129
GLU
123
L
GLN
124
n
130
GLN
124
L
LEU
125
n
131
LEU
125
L
THR
126
n
132
THR
126
L
SER
127
n
133
SER
127
L
GLY
128
n
134
GLY
128
L
GLY
129
n
135
GLY
129
L
ALA
130
n
136
ALA
130
L
SER
131
n
137
SER
131
L
VAL
132
n
138
VAL
132
L
VAL
133
n
139
VAL
133
L
CYS
134
n
140
CYS
134
L
PHE
135
n
141
PHE
135
L
LEU
136
n
142
LEU
136
L
ASN
137
n
143
ASN
137
L
ASN
138
n
144
ASN
138
L
PHE
139
n
145
PHE
139
L
TYR
140
n
146
TYR
140
L
PRO
141
n
147
PRO
141
L
LYS
142
n
148
LYS
142
L
ASP
143
n
149
ASP
143
L
ILE
144
n
150
ILE
144
L
ASN
145
n
151
ASN
145
L
VAL
146
n
152
VAL
146
L
LYS
147
n
153
LYS
147
L
TRP
148
n
154
TRP
148
L
LYS
149
n
155
LYS
149
L
ILE
150
n
156
ILE
150
L
ASP
151
n
157
ASP
151
L
GLY
152
n
158
GLY
152
L
SER
153
n
159
SER
153
L
GLU
154
n
160
GLU
154
L
ARG
155
n
161
ARG
155
L
GLN
156
n
162
GLN
156
L
ASN
157
n
163
ASN
157
L
GLY
158
n
164
GLY
158
L
VAL
159
n
165
VAL
159
L
LEU
160
n
166
LEU
160
L
ASN
161
n
167
ASN
161
L
SER
162
n
168
SER
162
L
TRP
163
n
169
TRP
163
L
THR
164
n
170
THR
164
L
ASP
165
n
171
ASP
165
L
GLN
166
n
172
GLN
166
L
ASP
167
n
173
ASP
167
L
SER
168
n
174
SER
168
L
LYS
169
n
175
LYS
169
L
ASP
170
n
176
ASP
170
L
SER
171
n
177
SER
171
L
THR
172
n
178
THR
172
L
TYR
173
n
179
TYR
173
L
SER
174
n
180
SER
174
L
MET
175
n
181
MET
175
L
SER
176
n
182
SER
176
L
SER
177
n
183
SER
177
L
THR
178
n
184
THR
178
L
LEU
179
n
185
LEU
179
L
THR
180
n
186
THR
180
L
LEU
181
n
187
LEU
181
L
THR
182
n
188
THR
182
L
LYS
183
n
189
LYS
183
L
ASP
184
n
190
ASP
184
L
GLU
185
n
191
GLU
185
L
TYR
186
n
192
TYR
186
L
GLU
187
n
193
GLU
187
L
ARG
188
n
194
ARG
188
L
HIS
189
n
195
HIS
189
L
ASN
190
n
196
ASN
190
L
SER
191
n
197
SER
191
L
TYR
192
n
198
TYR
192
L
THR
193
n
199
THR
193
L
CYS
194
n
200
CYS
194
L
GLU
195
n
201
GLU
195
L
ALA
196
n
202
ALA
196
L
THR
197
n
203
THR
197
L
HIS
198
n
204
HIS
198
L
LYS
199
n
205
LYS
199
L
THR
200
n
206
THR
200
L
SER
201
n
207
SER
201
L
THR
202
n
208
THR
202
L
SER
203
n
209
SER
203
L
PRO
204
n
210
PRO
204
L
ILE
205
n
211
ILE
205
L
VAL
206
n
212
VAL
206
L
LYS
207
n
213
LYS
207
L
SER
208
n
214
SER
208
L
PHE
209
n
215
PHE
209
L
ASN
210
n
216
ASN
210
L
ARG
211
n
217
ARG
211
L
ASN
212
n
218
ASN
212
L
GLU
1
n
1
GLU
1
H
VAL
2
n
2
VAL
2
H
GLN
3
n
3
GLN
3
H
LEU
4
n
4
LEU
4
H
VAL
5
n
5
VAL
5
H
GLU
6
n
6
GLU
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
GLY
9
n
9
GLY
9
H
ASP
10
n
10
ASP
10
H
LEU
11
n
11
LEU
11
H
VAL
12
n
12
VAL
12
H
LYS
13
n
13
LYS
13
H
PRO
14
n
14
PRO
14
H
GLY
15
n
15
GLY
15
H
GLY
16
n
16
GLY
16
H
SER
17
n
17
SER
17
H
LEU
18
n
18
LEU
18
H
LYS
19
n
19
LYS
19
H
LEU
20
n
20
LEU
20
H
SER
21
n
21
SER
21
H
CYS
22
n
22
CYS
22
H
ALA
23
n
23
ALA
23
H
ALA
24
n
24
ALA
24
H
SER
25
n
25
SER
25
H
GLY
26
n
26
GLY
26
H
PHE
27
n
27
PHE
27
H
SER
28
n
28
SER
28
H
PHE
29
n
29
PHE
29
H
SER
30
n
30
SER
30
H
SER
31
n
31
SER
31
H
TYR
32
n
32
TYR
32
H
GLY
33
n
33
GLY
33
H
MET
34
n
34
MET
34
H
SER
35
n
35
SER
35
H
TRP
36
n
36
TRP
36
H
VAL
37
n
37
VAL
37
H
ARG
38
n
38
ARG
38
H
GLN
39
n
39
GLN
39
H
THR
40
n
40
THR
40
H
PRO
41
n
41
PRO
41
H
ASP
42
n
42
ASP
42
H
LYS
43
n
43
LYS
43
H
ARG
44
n
44
ARG
44
H
LEU
45
n
45
LEU
45
H
GLU
46
n
46
GLU
46
H
TRP
47
n
47
TRP
47
H
VAL
48
n
48
VAL
48
H
ALA
49
n
49
ALA
49
H
THR
50
n
50
THR
50
H
ILE
51
n
51
ILE
51
H
SER
52
n
52
SER
52
H
ASN
52
n
53
A
ASN
52
H
GLY
53
n
54
GLY
53
H
GLY
54
n
55
GLY
54
H
GLY
55
n
56
GLY
55
H
TYR
56
n
57
TYR
56
H
THR
57
n
58
THR
57
H
TYR
58
n
59
TYR
58
H
TYR
59
n
60
TYR
59
H
PRO
60
n
61
PRO
60
H
ASP
61
n
62
ASP
61
H
SER
62
n
63
SER
62
H
VAL
63
n
64
VAL
63
H
LYS
64
n
65
LYS
64
H
GLY
65
n
66
GLY
65
H
ARG
66
n
67
ARG
66
H
PHE
67
n
68
PHE
67
H
THR
68
n
69
THR
68
H
ILE
69
n
70
ILE
69
H
SER
70
n
71
SER
70
H
ARG
71
n
72
ARG
71
H
ASP
72
n
73
ASP
72
H
ASN
73
n
74
ASN
73
H
ALA
74
n
75
ALA
74
H
LYS
75
n
76
LYS
75
H
ASN
76
n
77
ASN
76
H
THR
77
n
78
THR
77
H
LEU
78
n
79
LEU
78
H
TYR
79
n
80
TYR
79
H
LEU
80
n
81
LEU
80
H
GLN
81
n
82
GLN
81
H
MET
82
n
83
MET
82
H
SER
82
n
84
A
SER
82
H
SER
82
n
85
B
SER
82
H
LEU
82
n
86
C
LEU
82
H
LYS
83
n
87
LYS
83
H
SER
84
n
88
SER
84
H
GLU
85
n
89
GLU
85
H
ASP
86
n
90
ASP
86
H
SER
87
n
91
SER
87
H
ALA
88
n
92
ALA
88
H
MET
89
n
93
MET
89
H
TYR
90
n
94
TYR
90
H
TYR
91
n
95
TYR
91
H
CYS
92
n
96
CYS
92
H
ALA
93
n
97
ALA
93
H
ARG
94
n
98
ARG
94
H
ARG
95
n
99
ARG
95
H
GLU
96
n
100
GLU
96
H
ARG
97
n
101
ARG
97
H
TYR
98
n
102
TYR
98
H
ASP
99
n
103
ASP
99
H
GLU
100
n
104
GLU
100
H
ASN
100
n
105
A
ASN
100
H
GLY
100
n
106
B
GLY
100
H
PHE
100
n
107
C
PHE
100
H
ALA
101
n
108
ALA
101
H
TYR
102
n
109
TYR
102
H
TRP
103
n
110
TRP
103
H
GLY
104
n
111
GLY
104
H
GLN
105
n
112
GLN
105
H
GLY
106
n
113
GLY
106
H
THR
107
n
114
THR
107
H
LEU
108
n
115
LEU
108
H
VAL
109
n
116
VAL
109
H
THR
110
n
117
THR
110
H
VAL
111
n
118
VAL
111
H
SER
112
n
119
SER
112
H
ALA
113
n
120
ALA
113
H
ALA
114
n
121
ALA
114
H
LYS
115
n
122
LYS
115
H
THR
116
n
123
THR
116
H
THR
117
n
124
THR
117
H
ALA
118
n
125
ALA
118
H
PRO
119
n
126
PRO
119
H
SER
120
n
127
SER
120
H
VAL
121
n
128
VAL
121
H
TYR
122
n
129
TYR
122
H
PRO
123
n
130
PRO
123
H
LEU
124
n
131
LEU
124
H
ALA
125
n
132
ALA
125
H
PRO
126
n
133
PRO
126
H
VAL
127
n
134
VAL
127
H
CYS
128
n
135
CYS
128
H
GLY
129
n
136
GLY
129
H
ASP
130
n
137
ASP
130
H
THR
133
n
138
THR
133
H
THR
134
n
139
THR
134
H
GLY
135
n
140
GLY
135
H
SER
136
n
141
SER
136
H
SER
137
n
142
SER
137
H
VAL
138
n
143
VAL
138
H
THR
139
n
144
THR
139
H
LEU
140
n
145
LEU
140
H
GLY
141
n
146
GLY
141
H
CYS
142
n
147
CYS
142
H
LEU
143
n
148
LEU
143
H
VAL
144
n
149
VAL
144
H
LYS
145
n
150
LYS
145
H
GLY
146
n
151
GLY
146
H
TYR
147
n
152
TYR
147
H
PHE
148
n
153
PHE
148
H
PRO
149
n
154
PRO
149
H
GLU
150
n
155
GLU
150
H
PRO
151
n
156
PRO
151
H
VAL
152
n
157
VAL
152
H
THR
153
n
158
THR
153
H
LEU
154
n
159
LEU
154
H
THR
156
n
160
THR
156
H
TRP
157
n
161
TRP
157
H
ASN
162
n
162
ASN
162
H
SER
163
n
163
SER
163
H
GLY
164
n
164
GLY
164
H
SER
165
n
165
SER
165
H
LEU
166
n
166
LEU
166
H
SER
167
n
167
SER
167
H
SER
168
n
168
SER
168
H
GLY
169
n
169
GLY
169
H
VAL
171
n
170
VAL
171
H
HIS
172
n
171
HIS
172
H
THR
173
n
172
THR
173
H
PHE
174
n
173
PHE
174
H
PRO
175
n
174
PRO
175
H
ALA
176
n
175
ALA
176
H
VAL
177
n
176
VAL
177
H
LEU
178
n
177
LEU
178
H
GLN
179
n
178
GLN
179
H
SER
180
n
179
SER
180
H
ASP
183
n
180
ASP
183
H
LEU
184
n
181
LEU
184
H
TYR
185
n
182
TYR
185
H
THR
186
n
183
THR
186
H
LEU
187
n
184
LEU
187
H
SER
188
n
185
SER
188
H
SER
189
n
186
SER
189
H
SER
190
n
187
SER
190
H
VAL
191
n
188
VAL
191
H
THR
192
n
189
THR
192
H
VAL
193
n
190
VAL
193
H
THR
194
n
191
THR
194
H
SER
195
n
192
SER
195
H
SER
196
n
193
SER
196
H
THR
198
n
194
THR
198
H
TRP
199
n
195
TRP
199
H
PRO
200
n
196
PRO
200
H
SER
202
n
197
SER
202
H
GLN
203
n
198
GLN
203
H
SER
204
n
199
SER
204
H
ILE
205
n
200
ILE
205
H
THR
206
n
201
THR
206
H
CYS
208
n
202
CYS
208
H
ASN
209
n
203
ASN
209
H
VAL
210
n
204
VAL
210
H
ALA
211
n
205
ALA
211
H
HIS
212
n
206
HIS
212
H
PRO
213
n
207
PRO
213
H
ALA
214
n
208
ALA
214
H
SER
215
n
209
SER
215
H
SER
216
n
210
SER
216
H
THR
217
n
211
THR
217
H
LYS
218
n
212
LYS
218
H
VAL
219
n
213
VAL
219
H
ASP
220
n
214
ASP
220
H
LYS
221
n
215
LYS
221
H
LYS
222
n
216
LYS
222
H
ILE
223
n
217
ILE
223
H
GLU
226
n
218
GLU
226
H
PRO
227
n
219
PRO
227
H
ARG
228
n
220
ARG
228
H
ACE
100
n
1
ACE
100
P
ASP
101
n
2
ASP
101
P
VAL
102
n
3
VAL
102
P
PRO
103
n
4
PRO
103
P
ASP
104
n
5
ASP
104
P
TYR
105
n
6
TYR
105
P
ALA
106
n
7
ALA
106
P
SER
107
n
8
SER
107
P
author_and_software_defined_assembly
PISA
3
trimeric
4610
-23
19670
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
L
O
SER
7
A
O
SER
7
L
N
SER
22
A
N
SER
22
L
O
CYS
23
A
O
CYS
23
L
N
PHE
71
A
N
PHE
77
L
N
THR
74
A
N
THR
80
L
O
THR
63
A
O
THR
69
L
O
THR
53
A
O
THR
59
L
N
TYR
49
A
N
TYR
55
L
N
LEU
47
A
N
LEU
53
L
O
TRP
35
A
O
TRP
41
L
O
GLN
38
A
O
GLN
44
L
N
VAL
85
A
N
VAL
91
L
N
ASN
90
A
N
ASN
96
L
O
THR
97
A
O
THR
103
L
O
THR
53
A
O
THR
59
L
N
TYR
49
A
N
TYR
55
L
N
LEU
47
A
N
LEU
53
L
O
TRP
35
A
O
TRP
41
L
O
GLN
38
A
O
GLN
44
L
N
VAL
85
A
N
VAL
91
L
N
TYR
86
A
N
TYR
92
L
O
THR
102
A
O
THR
108
L
N
GLU
105
A
N
GLU
111
L
O
LEU
11
A
O
LEU
11
L
N
PHE
118
A
N
PHE
124
L
O
VAL
133
A
O
VAL
139
L
O
PHE
139
A
O
PHE
145
L
N
TYR
173
A
N
TYR
179
L
N
THR
178
A
N
THR
184
L
O
LEU
160
A
O
LEU
166
L
N
ARG
155
A
N
ARG
161
L
O
TRP
148
A
O
TRP
154
L
O
LYS
149
A
O
LYS
155
L
N
THR
193
A
N
THR
199
L
O
ALA
196
A
O
ALA
202
L
N
ILE
205
A
N
ILE
211
H
N
SER
7
B
N
SER
7
H
O
SER
21
B
O
SER
21
H
N
GLN
81
B
N
GLN
82
H
O
THR
68
B
O
THR
69
H
N
VAL
12
B
N
VAL
12
H
O
THR
110
B
O
THR
117
H
N
VAL
109
B
N
VAL
116
H
O
ALA
88
B
O
ALA
92
H
N
ARG
95
B
N
ARG
99
H
O
GLY
33
B
O
GLY
33
H
N
ARG
38
B
N
ARG
38
H
O
GLU
46
B
O
GLU
46
H
O
THR
50
B
O
THR
50
H
N
TYR
58
B
N
TYR
59
H
N
LEU
124
B
N
LEU
131
H
O
GLY
141
B
O
GLY
146
H
O
TYR
147
B
O
TYR
152
H
N
TYR
185
B
N
TYR
182
H
O
SER
190
B
O
SER
187
H
N
HIS
172
B
N
HIS
171
H
O
THR
156
B
O
THR
160
H
N
ASN
209
B
N
ASN
203
H
N
HIS
212
B
N
HIS
206
H
O
THR
217
B
O
THR
211
1
L
CA
ASN
212
A
CA
ASN
218
1
Y
1
L
C
ASN
212
A
C
ASN
218
1
Y
1
L
O
ASN
212
A
O
ASN
218
1
Y
1
L
CB
ASN
212
A
CB
ASN
218
1
Y
1
L
CG
ASN
212
A
CG
ASN
218
1
Y
1
L
OD1
ASN
212
A
OD1
ASN
218
1
Y
1
L
ND2
ASN
212
A
ND2
ASN
218
1
Y
1
H
CA
ARG
228
B
CA
ARG
220
1
Y
1
H
C
ARG
228
B
C
ARG
220
1
Y
1
H
O
ARG
228
B
O
ARG
220
1
Y
1
H
CB
ARG
228
B
CB
ARG
220
1
Y
1
H
CG
ARG
228
B
CG
ARG
220
1
Y
1
H
CD
ARG
228
B
CD
ARG
220
1
Y
1
H
NE
ARG
228
B
NE
ARG
220
1
Y
1
H
CZ
ARG
228
B
CZ
ARG
220
1
Y
1
H
NH1
ARG
228
B
NH1
ARG
220
1
Y
1
H
NH2
ARG
228
B
NH2
ARG
220
1
Y
1
5.94
0.80
106.30
112.24
L
L
L
CD1
CG
CD2
TRP
TRP
TRP
35
35
35
N
1
-5.41
0.80
107.30
101.89
L
L
L
CE2
CD2
CG
TRP
TRP
TRP
35
35
35
N
1
-10.10
1.60
110.90
100.80
L
L
L
CG1
CB
CG2
VAL
VAL
VAL
46
46
46
N
1
6.42
0.80
106.30
112.72
L
L
L
CD1
CG
CD2
TRP
TRP
TRP
50
50
50
N
1
-5.96
0.80
107.30
101.34
L
L
L
CE2
CD2
CG
TRP
TRP
TRP
50
50
50
N
1
3.94
0.50
120.30
124.24
L
L
L
NE
CZ
NH1
ARG
ARG
ARG
61
61
61
N
1
-9.67
1.60
110.90
101.23
L
L
L
CG1
CB
CG2
VAL
VAL
VAL
85
85
85
N
1
-3.85
0.60
121.00
117.15
L
L
L
CB
CG
CD1
TYR
TYR
TYR
87
87
87
N
1
7.34
0.80
106.30
113.64
L
L
L
CD1
CG
CD2
TRP
TRP
TRP
148
148
148
N
1
-6.39
0.80
107.30
100.91
L
L
L
CE2
CD2
CG
TRP
TRP
TRP
148
148
148
N
1
-5.32
0.80
107.30
101.98
L
L
L
CE2
CD2
CG
TRP
TRP
TRP
163
163
163
N
1
6.02
0.90
133.90
139.92
L
L
L
CG
CD2
CE3
TRP
TRP
TRP
163
163
163
N
1
-3.78
0.50
120.30
116.52
L
L
L
NE
CZ
NH2
ARG
ARG
ARG
188
188
188
N
1
-4.29
0.60
121.00
116.71
L
L
L
CB
CG
CD2
TYR
TYR
TYR
192
192
192
N
1
-9.76
1.60
100.20
90.44
H
H
H
CG
SD
CE
MET
MET
MET
34
34
34
N
1
6.11
0.80
106.30
112.41
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
36
36
36
N
1
-8.59
1.30
127.00
118.41
H
H
H
CB
CG
CD1
TRP
TRP
TRP
36
36
36
N
1
-5.81
0.80
107.30
101.49
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
36
36
36
N
1
6.09
0.90
133.90
139.99
H
H
H
CG
CD2
CE3
TRP
TRP
TRP
36
36
36
N
1
8.11
0.80
106.30
114.41
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
47
47
47
N
1
-6.33
0.80
107.30
100.97
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
47
47
47
N
1
-6.92
0.60
121.00
114.08
H
H
H
CB
CG
CD2
TYR
TYR
TYR
59
59
59
N
1
4.02
0.50
120.30
124.32
H
H
H
NE
CZ
NH1
ARG
ARG
ARG
66
66
66
N
1
4.74
0.50
120.30
125.04
H
H
H
NE
CZ
NH1
ARG
ARG
ARG
71
71
71
N
1
-3.11
0.50
120.30
117.19
H
H
H
NE
CZ
NH2
ARG
ARG
ARG
71
71
71
N
1
4.32
0.50
120.30
124.62
H
H
H
NE
CZ
NH1
ARG
ARG
ARG
94
94
94
N
1
5.74
0.80
106.30
112.04
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
103
103
103
N
1
-5.99
0.80
107.30
101.31
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
103
103
103
N
1
5.47
0.90
133.90
139.37
H
H
H
CG
CD2
CE3
TRP
TRP
TRP
103
103
103
N
1
9.12
1.40
112.40
121.52
H
H
H
CA
CB
CG2
THR
THR
THR
107
107
107
N
1
16.78
2.30
115.30
132.08
H
H
H
CA
CB
CG
LEU
LEU
LEU
140
140
140
N
1
7.95
0.80
106.30
114.25
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
157
157
157
N
1
-6.40
1.00
110.10
103.70
H
H
H
CG
CD1
NE1
TRP
TRP
TRP
157
157
157
N
1
-5.96
0.80
107.30
101.34
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
157
157
157
N
1
6.03
0.80
106.30
112.33
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
199
199
199
N
1
-5.30
0.80
107.30
102.00
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
199
199
199
N
1
8.11
1.10
114.20
122.31
H
H
H
CA
CB
SG
CYS
CYS
CYS
208
208
208
N
1
-15.62
2.20
117.20
101.58
P
P
P
CA
C
N
ASP
ASP
VAL
101
101
102
Y
1
L
L
NE2
CD2
HIS
HIS
198
198
-0.082
0.011
1.373
1.291
N
1
H
H
NE2
CD2
HIS
HIS
172
172
-0.072
0.011
1.373
1.301
N
1
H
H
NE2
CD2
HIS
HIS
212
212
-0.070
0.011
1.373
1.303
N
1
L
ALA
51
58.82
-37.80
1
L
ASN
138
67.15
73.77
1
L
LYS
199
-39.75
-29.71
1
H
ASP
10
-173.22
-177.19
1
H
VAL
127
-125.38
-76.37
1
H
CYS
128
-68.59
-170.97
1
H
THR
133
-24.61
-45.71
1
H
SER
136
-121.99
-53.11
1
H
PRO
149
-72.90
-143.78
1
H
PRO
175
-38.95
152.22
1
H
SER
180
48.04
80.78
1
H
ASP
183
74.30
-29.47
1
H
THR
198
-123.39
-57.17
1
H
ALA
214
-57.51
3.34
1
P
PRO
103
-60.93
-171.98
1
P
ALA
106
-84.73
47.20
0.17
0.17
2.8
10.0
57732
1
2.0
2.8
10.0
1
3391
0
0
3390
0.016
3.60
model building
X-PLOR
3.0
refinement
X-PLOR
3.0
phasing
X-PLOR
3.0
A DETAILED ANALYSIS OF THE FREE AND BOUND CONFORMATION OF AN ANTIBODY: X-RAY STRUCTURES OF ANTI-PEPTIDE FAB 17(SLASH)9 AND THREE DIFFERENT FAB-PEPTIDE COMPLEXES
1
N
N
2
N
N
3
N
N
4
N
N
L
GLN
79
A
GLN
85
HELX_P
L
LEU
83
A
LEU
89
5
1
5
L
SER
121
A
SER
127
HELX_P
L
SER
127
A
SER
133
1
2
7
L
LYS
183
A
LYS
189
HELX_P
L
GLU
187
A
GLU
193
1
3
5
H
SER
28
B
SER
28
HELX_P
H
TYR
32
B
TYR
32
5
4
5
H
LYS
83
B
LYS
87
HELX_P
H
SER
87
B
SER
91
5
5
5
H
SER
163
B
SER
163
HELX_P
H
SER
165
B
SER
165
5
6
3
H
PRO
213
B
PRO
207
HELX_P
H
SER
216
B
SER
210
5
7
4
disulf
2.021
L
CYS
23
A
SG
CYS
23
1_555
L
CYS
88
A
SG
CYS
94
1_555
disulf
1.981
L
CYS
134
A
SG
CYS
140
1_555
L
CYS
194
A
SG
CYS
200
1_555
disulf
1.983
H
CYS
22
B
SG
CYS
22
1_555
H
CYS
92
B
SG
CYS
96
1_555
disulf
2.002
H
CYS
142
B
SG
CYS
147
1_555
H
CYS
208
B
SG
CYS
202
1_555
covale
1.348
both
P
ACE
100
C
C
ACE
1
1_555
P
ASP
101
C
N
ASP
2
1_555
IMMUNOGLOBULIN
IMMUNOGLOBULIN
L
SER
7
A
SER
7
1
L
PRO
8
A
PRO
8
-8.55
L
ASN
94
A
ASN
100
1
L
PRO
95
A
PRO
101
-2.27
L
TYR
140
A
TYR
146
1
L
PRO
141
A
PRO
147
1.20
H
PHE
148
B
PHE
153
1
H
PRO
149
B
PRO
154
-24.52
H
GLU
150
B
GLU
155
1
H
PRO
151
B
PRO
156
4.55
H
TRP
199
B
TRP
195
1
H
PRO
200
B
PRO
196
11.86
A31790
PIR
1
1
A31790
DIVMTQSPSSLTVTAGEKVTMSCTSSQSLFNSGKQKNYLTWYQQKPGQPPKVLIYWASTRESGVPDRFTGSGSGTDFTLT
ISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE
RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
AAA38230
GB
2
1
533229
EVQLVESGGDLVKPGGSLKLSCAASGFSFSSYGMSWVRQTPDKRLEWVATISNGGGYTYYPDSVKGRFTISRDNAKNTLY
LQMSSLKSEDSAMYYCARRERYDENGFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDXXTTGSSVTLGCLVKGYFPEPVT
LXTWXXXXNSGSLSSGXVHTFPAVLQSXXDLYTLSSSVTVTSSXTWPXSQSITXCNVAHPASSTKVDKKIXXERGPTIXX
KPCPPCKCPAPNLLG
1IFH
PDB
3
1IFH
1
218
1IFH
1
212
A31790
L
1
1
218
1
219
1IFH
1
228
533229
H
2
1
220
100
107
1IFH
100
107
1IFH
P
3
1
8
2
insertion
PRO
227
1IFH
H
533229
GB
219
4
5
6
4
4
3
6
4
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
L
MET
4
A
MET
4
L
SER
7
A
SER
7
L
VAL
19
A
VAL
19
L
SER
25
A
SER
25
L
ASP
70
A
ASP
76
L
ILE
75
A
ILE
81
L
PHE
62
A
PHE
68
L
SER
67
A
SER
73
L
THR
53
A
THR
59
L
ARG
54
A
ARG
60
L
LYS
45
A
LYS
51
L
TYR
49
A
TYR
55
L
LEU
33
A
LEU
39
L
GLN
38
A
GLN
44
L
VAL
85
A
VAL
91
L
ASN
90
A
ASN
96
L
THR
97
A
THR
103
L
PHE
98
A
PHE
104
L
THR
53
A
THR
59
L
ARG
54
A
ARG
60
L
LYS
45
A
LYS
51
L
TYR
49
A
TYR
55
L
LEU
33
A
LEU
39
L
GLN
38
A
GLN
44
L
VAL
85
A
VAL
91
L
ASN
90
A
ASN
96
L
THR
102
A
THR
108
L
LEU
106
A
LEU
112
L
SER
10
A
SER
10
L
VAL
13
A
VAL
13
L
THR
114
A
THR
120
L
PHE
118
A
PHE
124
L
GLY
129
A
GLY
135
L
PHE
139
A
PHE
145
L
TYR
173
A
TYR
179
L
THR
182
A
THR
188
L
VAL
159
A
VAL
165
L
TRP
163
A
TRP
169
L
SER
153
A
SER
159
L
ARG
155
A
ARG
161
L
ASN
145
A
ASN
151
L
ILE
150
A
ILE
156
L
SER
191
A
SER
197
L
THR
197
A
THR
203
L
ILE
205
A
ILE
211
L
ASN
210
A
ASN
216
H
GLN
3
B
GLN
3
H
SER
7
B
SER
7
H
SER
17
B
SER
17
H
SER
25
B
SER
25
H
PHE
67
B
PHE
68
H
ASP
72
B
ASP
73
H
LEU
11
B
LEU
11
H
VAL
12
B
VAL
12
H
THR
107
B
THR
114
H
VAL
111
B
VAL
118
H
ALA
88
B
ALA
92
H
ARG
95
B
ARG
99
H
GLY
33
B
GLY
33
H
GLN
39
B
GLN
39
H
LEU
45
B
LEU
45
H
ILE
51
B
ILE
51
H
THR
57
B
THR
58
H
TYR
58
B
TYR
59
H
SER
120
B
SER
127
H
LEU
124
B
LEU
131
H
SER
137
B
SER
142
H
TYR
147
B
TYR
152
H
LEU
184
B
LEU
181
H
THR
194
B
THR
191
H
VAL
171
B
VAL
170
H
GLN
179
B
GLN
178
H
THR
153
B
THR
158
H
TRP
157
B
TRP
161
H
ILE
205
B
ILE
200
H
HIS
212
B
HIS
206
H
THR
217
B
THR
211
H
ILE
223
B
ILE
217
19
P 21 21 21