1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Welsh, L.C. Symmons, M.F. Perham, R.N. Marvin, D.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N O N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N N N 58 S C N 59 N C N 60 N O N 61 N C N 62 N C N 63 N C N 64 N O N 65 N N N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N N N 78 N C N 79 N C N 80 N O N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N N N 88 S C N 89 N C N 90 N O N 91 S C N 92 N C N 93 N C N 94 N C N 95 N O N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N N N 110 S C N 111 N C N 112 N O N 113 N C N 114 N C N 115 N C N 116 N C N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N N N 132 S C N 133 N C N 134 N O N 135 N C N 136 N C N 137 N C N 138 N C N 139 N N N 140 N O N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N N N 157 S C N 158 N C N 159 N O N 160 N C N 161 N C N 162 N S N 163 N C N 164 N O N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N N N 177 S C N 178 N C N 179 N O N 180 N C Y 181 N C Y 182 N C Y 183 N C Y 184 N C Y 185 N C Y 186 N C N 187 N O N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N N N 200 S C N 201 N C N 202 N O N 203 N C N 204 N O N 205 N O N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N N N 214 S C N 215 N C N 216 N O N 217 R C N 218 N O N 219 N C N 220 N O N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C Y 235 N C Y 236 N C Y 237 N C Y 238 N N Y 239 N C Y 240 N C Y 241 N C Y 242 N C Y 243 N C N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N N N 258 S C N 259 N C N 260 N O N 261 N C N 262 N C N 263 N C N 264 N O N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N doub N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N doub N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N doub N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N doub N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N doub N 174 N sing N 175 N sing N 176 N sing N 177 N sing Y 178 N doub Y 179 N sing Y 180 N sing N 181 N sing Y 182 N doub N 183 N sing Y 184 N doub N 185 N sing Y 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N doub N 226 N sing N 227 N sing N 228 N sing N 229 N sing Y 230 N doub Y 231 N sing Y 232 N sing N 233 N sing Y 234 N doub Y 235 N sing Y 236 N sing N 237 N sing Y 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 283 155 177 10.1006/jmbi.1998.2081 9761681 Structure of the capsid of Pf3 filamentous phage determined from X-ray fibre diffraction data at 3.1 A resolution. 1998 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 51 792 Pf1 Filamentous Bacteriophage: Refinement of a Molecular Model by Simulated Annealing Using 3.3 A Resolution X-Ray Fibre Diffraction Data 1995 US Phase Transitions PHTRDP 1101 0141-1594 39 45 Two Forms of Pf1 Inovirus: X-Ray Diffraction Studies on a Structural Phase Transition and a Calculated Libration Normal Mode of the Asymmetric Unit 1992 UK Int.J.Biol.Macromol. IJBMDR 0708 0141-8130 12 125 Model-Building Studies of Inovirus: Genetic Variations on a Geometric Theme 1990 UK Int.J.Biol.Macromol. IJBMDR 0708 0141-8130 12 335 Erratum. Model-Building Studies of Inovirus: Genetic Variations on a Geometric Theme 1990 UK Int.J.Biol.Macromol. IJBMDR 0708 0141-8130 11 159 Dynamics of Telescoping Inovirus: A Mechanism for Assembly at Membrane Adhesions 1989 10.2210/pdb1ifp/pdb pdb_00001ifp 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298 1 MIRRORS IMAGE PLATE 1995-12 MARRESEARCH GE(111) M 1 1.488 1.0 PX7.2 SRS 1.488 SYNCHROTRON SRS BEAMLINE PX7.2 4632.466 MAJOR COAT PROTEIN ASSEMBLY 1 man polymer PF3 INOVIRUS no no MQSVITDVTGQLTAVQADITTIGGAIIVLAAVVLGIRWIKAQFF MQSVITDVTGQLTAVQADITTIGGAIIVLAAVVLGIRWIKAQFF A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Inovirus NEW YORK Pseudomonas sample FILAMENTOUS BACTERIOPHAGE 10872 Pseudomonas phage Pf3 287 Pseudomonas aeruginosa 1 7.0 pH 7.0 database_2 pdbx_database_status pdbx_initial_refinement_model pdbx_struct_oper_list chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Other Refinement description Data collection 1 0 1998-11-04 1 1 2008-03-24 1 2 2011-07-13 1 3 2023-08-09 1 4 2024-05-22 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.type Y BNL 1998-01-22 REL REL 1 no 1 35 2.900000 65.667000 1IFN PDB experimental model MET 1 n 1 MET 1 A GLN 2 n 2 GLN 2 A SER 3 n 3 SER 3 A VAL 4 n 4 VAL 4 A ILE 5 n 5 ILE 5 A THR 6 n 6 THR 6 A ASP 7 n 7 ASP 7 A VAL 8 n 8 VAL 8 A THR 9 n 9 THR 9 A GLY 10 n 10 GLY 10 A GLN 11 n 11 GLN 11 A LEU 12 n 12 LEU 12 A THR 13 n 13 THR 13 A ALA 14 n 14 ALA 14 A VAL 15 n 15 VAL 15 A GLN 16 n 16 GLN 16 A ALA 17 n 17 ALA 17 A ASP 18 n 18 ASP 18 A ILE 19 n 19 ILE 19 A THR 20 n 20 THR 20 A THR 21 n 21 THR 21 A ILE 22 n 22 ILE 22 A GLY 23 n 23 GLY 23 A GLY 24 n 24 GLY 24 A ALA 25 n 25 ALA 25 A ILE 26 n 26 ILE 26 A ILE 27 n 27 ILE 27 A VAL 28 n 28 VAL 28 A LEU 29 n 29 LEU 29 A ALA 30 n 30 ALA 30 A ALA 31 n 31 ALA 31 A VAL 32 n 32 VAL 32 A VAL 33 n 33 VAL 33 A LEU 34 n 34 LEU 34 A GLY 35 n 35 GLY 35 A ILE 36 n 36 ILE 36 A ARG 37 n 37 ARG 37 A TRP 38 n 38 TRP 38 A ILE 39 n 39 ILE 39 A LYS 40 n 40 LYS 40 A ALA 41 n 41 ALA 41 A GLN 42 n 42 GLN 42 A PHE 43 n 43 PHE 43 A PHE 44 n 44 PHE 44 A representative helical assembly 35 helical helical asymmetric unit 1 monomeric helical asymmetric unit, std helical frame 1 monomeric 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 1_555 x,y,z identity operation 0.00000 0.00000 0.00000 0.80552512 0.59256162 0.00000000 -0.59256162 0.80552512 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -49.30000 0.87183001 -0.48980857 0.00000000 0.48980857 0.87183001 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -46.40000 -0.08706881 -0.99620230 0.00000000 0.99620230 -0.08706881 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -43.50000 -0.94358154 -0.33114027 0.00000000 0.33114027 -0.94358154 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -40.60000 -0.69051640 0.72331674 0.00000000 -0.72331674 -0.69051640 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -37.70000 0.37454186 0.92721000 0.00000000 -0.92721000 0.37454186 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -34.80000 0.99916827 0.04077704 0.00000000 -0.04077704 0.99916827 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -31.90000 0.44885117 -0.89360653 0.00000000 0.89360653 0.44885117 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -29.00000 -0.62927970 -0.77717891 0.00000000 0.77717891 -0.62927970 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -26.10000 -0.96742700 0.25315014 0.00000000 -0.25315014 -0.96742700 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -23.20000 -0.16795604 0.98579449 0.00000000 -0.98579449 -0.16795604 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -20.30000 0.82901805 0.55922184 0.00000000 -0.55922184 0.82901805 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -17.40000 0.85113194 -0.52495182 0.00000000 0.52495182 0.85113194 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -14.50000 -0.12761857 -0.99182332 0.00000000 0.99182332 -0.12761857 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -11.60000 -0.95629965 -0.29238840 0.00000000 0.29238840 -0.95629965 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -8.70000 -0.66044736 0.75087235 0.00000000 -0.75087235 -0.66044736 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -5.80000 0.41203922 0.91116611 0.00000000 -0.91116611 0.41203922 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -2.90000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 1_555 x,y,z identity operation 0.00000 0.00000 -0.00000 0.41203922 -0.91116611 0.00000000 0.91116611 0.41203922 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 2.90000 -0.66044736 -0.75087235 0.00000000 0.75087235 -0.66044736 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 5.80000 -0.95629965 0.29238840 0.00000000 -0.29238840 -0.95629965 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 8.70000 -0.12761857 0.99182332 0.00000000 -0.99182332 -0.12761857 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 11.60000 0.85113194 0.52495182 0.00000000 -0.52495182 0.85113194 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 14.50000 0.82901805 -0.55922184 0.00000000 0.55922184 0.82901805 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 17.40000 -0.16795604 -0.98579449 0.00000000 0.98579449 -0.16795604 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 20.30000 -0.96742700 -0.25315014 0.00000000 0.25315014 -0.96742700 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 23.20000 -0.62927970 0.77717891 0.00000000 -0.77717891 -0.62927970 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 26.10000 0.44885117 0.89360653 0.00000000 -0.89360653 0.44885117 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 29.00000 0.99916827 -0.04077704 0.00000000 0.04077704 0.99916827 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 31.90000 0.37454186 -0.92721000 0.00000000 0.92721000 0.37454186 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 34.80000 -0.69051640 -0.72331674 0.00000000 0.72331674 -0.69051640 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 37.70000 -0.94358154 0.33114027 0.00000000 -0.33114027 -0.94358154 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 40.60000 -0.08706881 0.99620230 0.00000000 -0.99620230 -0.08706881 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 43.50000 0.87183001 0.48980857 0.00000000 -0.48980857 0.87183001 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 46.40000 0.80552512 -0.59256162 0.00000000 0.59256162 0.80552512 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 49.30000 PARHCSDX.PRO TOPHCSDX.PRO TOPH19.PEP 19.0 MODEL REFINED WITH A VERSION OF X-PLOR 3.1 MODIFIED FOR USE WITH FIBRE DIFFRACTION DATA BY WANG & STUBBS (1993) ACTA CRYST. A49, 504-513. 0.39 0.01 0.17 0.17 3.1 12.0 211 1734 12.2 1 A POSTERIORI MOLECULAR REPLACEMENT 1IFN 3.1 12.0 0 326 0 0 326 0.017 2.4 16.1 2.4 1 STRICT NCS WAS IMPOSED ON THE MODEL THROUGHOUT THE REFINEMENT. 1 X-RAY DIFFRACTION 0.251 3.43 112 4 3.1 60.0 1IFP 1 model building X-PLOR refinement X-PLOR data reduction CCP13 (LSQINT) data scaling CCP13-FDSCALE phasing X-PLOR INOVIRUS (FILAMENTOUS BACTERIOPHAGE) STRAIN PF3 MAJOR COAT PROTEIN ASSEMBLY 1 Y N A GLN 2 A GLN 2 HELX_P A GLN 42 A GLN 42 1 1 41 VIRUS VIRUS COAT PROTEIN, Helical virus, Virus COAT1_BPPF3 UNP 1 1 P03623 MQSVITDVTGQLTAVQADITTIGGAIIVLAAVVLGIRWIKAQFF 1 44 1IFP 1 44 P03623 A 1 1 44 1 P 1