1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Welsh, L.C.
Symmons, M.F.
Perham, R.N.
Marvin, D.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
283
155
177
10.1006/jmbi.1998.2081
9761681
Structure of the capsid of Pf3 filamentous phage determined from X-ray fibre diffraction data at 3.1 A resolution.
1998
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
51
792
Pf1 Filamentous Bacteriophage: Refinement of a Molecular Model by Simulated Annealing Using 3.3 A Resolution X-Ray Fibre Diffraction Data
1995
US
Phase Transitions
PHTRDP
1101
0141-1594
39
45
Two Forms of Pf1 Inovirus: X-Ray Diffraction Studies on a Structural Phase Transition and a Calculated Libration Normal Mode of the Asymmetric Unit
1992
UK
Int.J.Biol.Macromol.
IJBMDR
0708
0141-8130
12
125
Model-Building Studies of Inovirus: Genetic Variations on a Geometric Theme
1990
UK
Int.J.Biol.Macromol.
IJBMDR
0708
0141-8130
12
335
Erratum. Model-Building Studies of Inovirus: Genetic Variations on a Geometric Theme
1990
UK
Int.J.Biol.Macromol.
IJBMDR
0708
0141-8130
11
159
Dynamics of Telescoping Inovirus: A Mechanism for Assembly at Membrane Adhesions
1989
10.2210/pdb1ifp/pdb
pdb_00001ifp
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
MIRRORS
IMAGE PLATE
1995-12
MARRESEARCH
GE(111)
M
1
1.488
1.0
PX7.2
SRS
1.488
SYNCHROTRON
SRS BEAMLINE PX7.2
4632.466
MAJOR COAT PROTEIN ASSEMBLY
1
man
polymer
PF3 INOVIRUS
no
no
MQSVITDVTGQLTAVQADITTIGGAIIVLAAVVLGIRWIKAQFF
MQSVITDVTGQLTAVQADITTIGGAIIVLAAVVLGIRWIKAQFF
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Inovirus
NEW YORK
Pseudomonas
sample
FILAMENTOUS BACTERIOPHAGE
10872
Pseudomonas phage Pf3
287
Pseudomonas aeruginosa
1
7.0
pH 7.0
database_2
pdbx_database_status
pdbx_initial_refinement_model
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
Refinement description
1
0
1998-11-04
1
1
2008-03-24
1
2
2011-07-13
1
3
2023-08-09
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.type
Y
BNL
1998-01-22
REL
REL
1
no
1
35
2.900000
65.667000
1IFN
PDB
experimental model
MET
1
n
1
MET
1
A
GLN
2
n
2
GLN
2
A
SER
3
n
3
SER
3
A
VAL
4
n
4
VAL
4
A
ILE
5
n
5
ILE
5
A
THR
6
n
6
THR
6
A
ASP
7
n
7
ASP
7
A
VAL
8
n
8
VAL
8
A
THR
9
n
9
THR
9
A
GLY
10
n
10
GLY
10
A
GLN
11
n
11
GLN
11
A
LEU
12
n
12
LEU
12
A
THR
13
n
13
THR
13
A
ALA
14
n
14
ALA
14
A
VAL
15
n
15
VAL
15
A
GLN
16
n
16
GLN
16
A
ALA
17
n
17
ALA
17
A
ASP
18
n
18
ASP
18
A
ILE
19
n
19
ILE
19
A
THR
20
n
20
THR
20
A
THR
21
n
21
THR
21
A
ILE
22
n
22
ILE
22
A
GLY
23
n
23
GLY
23
A
GLY
24
n
24
GLY
24
A
ALA
25
n
25
ALA
25
A
ILE
26
n
26
ILE
26
A
ILE
27
n
27
ILE
27
A
VAL
28
n
28
VAL
28
A
LEU
29
n
29
LEU
29
A
ALA
30
n
30
ALA
30
A
ALA
31
n
31
ALA
31
A
VAL
32
n
32
VAL
32
A
VAL
33
n
33
VAL
33
A
LEU
34
n
34
LEU
34
A
GLY
35
n
35
GLY
35
A
ILE
36
n
36
ILE
36
A
ARG
37
n
37
ARG
37
A
TRP
38
n
38
TRP
38
A
ILE
39
n
39
ILE
39
A
LYS
40
n
40
LYS
40
A
ALA
41
n
41
ALA
41
A
GLN
42
n
42
GLN
42
A
PHE
43
n
43
PHE
43
A
PHE
44
n
44
PHE
44
A
representative helical assembly
35
helical
helical asymmetric unit
1
monomeric
helical asymmetric unit, std helical frame
1
monomeric
1.00000000
0.00000000
0.00000000
0.00000000
1.00000000
0.00000000
0.00000000
0.00000000
1.00000000
1_555
x,y,z
identity operation
0.00000
0.00000
0.00000
0.80552512
0.59256162
0.00000000
-0.59256162
0.80552512
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-49.30000
0.87183001
-0.48980857
0.00000000
0.48980857
0.87183001
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-46.40000
-0.08706881
-0.99620230
0.00000000
0.99620230
-0.08706881
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-43.50000
-0.94358154
-0.33114027
0.00000000
0.33114027
-0.94358154
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-40.60000
-0.69051640
0.72331674
0.00000000
-0.72331674
-0.69051640
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-37.70000
0.37454186
0.92721000
0.00000000
-0.92721000
0.37454186
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-34.80000
0.99916827
0.04077704
0.00000000
-0.04077704
0.99916827
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-31.90000
0.44885117
-0.89360653
0.00000000
0.89360653
0.44885117
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-29.00000
-0.62927970
-0.77717891
0.00000000
0.77717891
-0.62927970
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-26.10000
-0.96742700
0.25315014
0.00000000
-0.25315014
-0.96742700
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-23.20000
-0.16795604
0.98579449
0.00000000
-0.98579449
-0.16795604
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-20.30000
0.82901805
0.55922184
0.00000000
-0.55922184
0.82901805
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-17.40000
0.85113194
-0.52495182
0.00000000
0.52495182
0.85113194
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-14.50000
-0.12761857
-0.99182332
0.00000000
0.99182332
-0.12761857
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-11.60000
-0.95629965
-0.29238840
0.00000000
0.29238840
-0.95629965
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-8.70000
-0.66044736
0.75087235
0.00000000
-0.75087235
-0.66044736
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-5.80000
0.41203922
0.91116611
0.00000000
-0.91116611
0.41203922
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
-2.90000
1.00000000
0.00000000
0.00000000
0.00000000
1.00000000
0.00000000
0.00000000
0.00000000
1.00000000
1_555
x,y,z
identity operation
0.00000
0.00000
-0.00000
0.41203922
-0.91116611
0.00000000
0.91116611
0.41203922
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
2.90000
-0.66044736
-0.75087235
0.00000000
0.75087235
-0.66044736
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
5.80000
-0.95629965
0.29238840
0.00000000
-0.29238840
-0.95629965
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
8.70000
-0.12761857
0.99182332
0.00000000
-0.99182332
-0.12761857
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
11.60000
0.85113194
0.52495182
0.00000000
-0.52495182
0.85113194
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
14.50000
0.82901805
-0.55922184
0.00000000
0.55922184
0.82901805
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
17.40000
-0.16795604
-0.98579449
0.00000000
0.98579449
-0.16795604
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
20.30000
-0.96742700
-0.25315014
0.00000000
0.25315014
-0.96742700
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
23.20000
-0.62927970
0.77717891
0.00000000
-0.77717891
-0.62927970
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
26.10000
0.44885117
0.89360653
0.00000000
-0.89360653
0.44885117
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
29.00000
0.99916827
-0.04077704
0.00000000
0.04077704
0.99916827
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
31.90000
0.37454186
-0.92721000
0.00000000
0.92721000
0.37454186
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
34.80000
-0.69051640
-0.72331674
0.00000000
0.72331674
-0.69051640
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
37.70000
-0.94358154
0.33114027
0.00000000
-0.33114027
-0.94358154
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
40.60000
-0.08706881
0.99620230
0.00000000
-0.99620230
-0.08706881
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
43.50000
0.87183001
0.48980857
0.00000000
-0.48980857
0.87183001
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
46.40000
0.80552512
-0.59256162
0.00000000
0.59256162
0.80552512
0.00000000
0.00000000
0.00000000
1.00000000
helical symmetry operation
0.00000
0.00000
49.30000
PARHCSDX.PRO
TOPHCSDX.PRO
TOPH19.PEP
19.0
MODEL REFINED WITH A VERSION OF X-PLOR 3.1 MODIFIED FOR USE WITH FIBRE DIFFRACTION DATA BY WANG & STUBBS (1993) ACTA CRYST. A49, 504-513.
0.39
0.01
0.17
0.17
3.1
12.0
211
1734
12.2
1
A POSTERIORI
MOLECULAR REPLACEMENT
1IFN
3.1
12.0
0
326
0
0
326
0.017
2.4
16.1
2.4
1
STRICT NCS WAS IMPOSED ON THE MODEL THROUGHOUT THE REFINEMENT.
1
X-RAY DIFFRACTION
0.251
3.43
112
4
3.1
60.0
1IFP
1
model building
X-PLOR
refinement
X-PLOR
data reduction
CCP13
(LSQINT)
data scaling
CCP13-FDSCALE
phasing
X-PLOR
INOVIRUS (FILAMENTOUS BACTERIOPHAGE) STRAIN PF3 MAJOR COAT PROTEIN ASSEMBLY
1
Y
N
A
GLN
2
A
GLN
2
HELX_P
A
GLN
42
A
GLN
42
1
1
41
VIRUS
VIRUS COAT PROTEIN, Helical virus, Virus
COAT1_BPPF3
UNP
1
1
P03623
MQSVITDVTGQLTAVQADITTIGGAIIVLAAVVLGIRWIKAQFF
1
44
1IFP
1
44
P03623
A
1
1
44
1
P 1