1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Welsh, L.C. Symmons, M.F. Perham, R.N. Marvin, D.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 283 155 177 10.1006/jmbi.1998.2081 9761681 Structure of the capsid of Pf3 filamentous phage determined from X-ray fibre diffraction data at 3.1 A resolution. 1998 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 51 792 Pf1 Filamentous Bacteriophage: Refinement of a Molecular Model by Simulated Annealing Using 3.3 A Resolution X-Ray Fibre Diffraction Data 1995 US Phase Transitions PHTRDP 1101 0141-1594 39 45 Two Forms of Pf1 Inovirus: X-Ray Diffraction Studies on a Structural Phase Transition and a Calculated Libration Normal Mode of the Asymmetric Unit 1992 UK Int.J.Biol.Macromol. IJBMDR 0708 0141-8130 12 125 Model-Building Studies of Inovirus: Genetic Variations on a Geometric Theme 1990 UK Int.J.Biol.Macromol. IJBMDR 0708 0141-8130 12 335 Erratum. Model-Building Studies of Inovirus: Genetic Variations on a Geometric Theme 1990 UK Int.J.Biol.Macromol. IJBMDR 0708 0141-8130 11 159 Dynamics of Telescoping Inovirus: A Mechanism for Assembly at Membrane Adhesions 1989 10.2210/pdb1ifp/pdb pdb_00001ifp 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298 1 MIRRORS IMAGE PLATE 1995-12 MARRESEARCH GE(111) M 1 1.488 1.0 PX7.2 SRS 1.488 SYNCHROTRON SRS BEAMLINE PX7.2 4632.466 MAJOR COAT PROTEIN ASSEMBLY 1 man polymer PF3 INOVIRUS no no MQSVITDVTGQLTAVQADITTIGGAIIVLAAVVLGIRWIKAQFF MQSVITDVTGQLTAVQADITTIGGAIIVLAAVVLGIRWIKAQFF A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Inovirus NEW YORK Pseudomonas sample FILAMENTOUS BACTERIOPHAGE 10872 Pseudomonas phage Pf3 287 Pseudomonas aeruginosa 1 7.0 pH 7.0 database_2 pdbx_database_status pdbx_initial_refinement_model pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other Refinement description 1 0 1998-11-04 1 1 2008-03-24 1 2 2011-07-13 1 3 2023-08-09 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.type Y BNL 1998-01-22 REL REL 1 no 1 35 2.900000 65.667000 1IFN PDB experimental model MET 1 n 1 MET 1 A GLN 2 n 2 GLN 2 A SER 3 n 3 SER 3 A VAL 4 n 4 VAL 4 A ILE 5 n 5 ILE 5 A THR 6 n 6 THR 6 A ASP 7 n 7 ASP 7 A VAL 8 n 8 VAL 8 A THR 9 n 9 THR 9 A GLY 10 n 10 GLY 10 A GLN 11 n 11 GLN 11 A LEU 12 n 12 LEU 12 A THR 13 n 13 THR 13 A ALA 14 n 14 ALA 14 A VAL 15 n 15 VAL 15 A GLN 16 n 16 GLN 16 A ALA 17 n 17 ALA 17 A ASP 18 n 18 ASP 18 A ILE 19 n 19 ILE 19 A THR 20 n 20 THR 20 A THR 21 n 21 THR 21 A ILE 22 n 22 ILE 22 A GLY 23 n 23 GLY 23 A GLY 24 n 24 GLY 24 A ALA 25 n 25 ALA 25 A ILE 26 n 26 ILE 26 A ILE 27 n 27 ILE 27 A VAL 28 n 28 VAL 28 A LEU 29 n 29 LEU 29 A ALA 30 n 30 ALA 30 A ALA 31 n 31 ALA 31 A VAL 32 n 32 VAL 32 A VAL 33 n 33 VAL 33 A LEU 34 n 34 LEU 34 A GLY 35 n 35 GLY 35 A ILE 36 n 36 ILE 36 A ARG 37 n 37 ARG 37 A TRP 38 n 38 TRP 38 A ILE 39 n 39 ILE 39 A LYS 40 n 40 LYS 40 A ALA 41 n 41 ALA 41 A GLN 42 n 42 GLN 42 A PHE 43 n 43 PHE 43 A PHE 44 n 44 PHE 44 A representative helical assembly 35 helical helical asymmetric unit 1 monomeric helical asymmetric unit, std helical frame 1 monomeric 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 1_555 x,y,z identity operation 0.00000 0.00000 0.00000 0.80552512 0.59256162 0.00000000 -0.59256162 0.80552512 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -49.30000 0.87183001 -0.48980857 0.00000000 0.48980857 0.87183001 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -46.40000 -0.08706881 -0.99620230 0.00000000 0.99620230 -0.08706881 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -43.50000 -0.94358154 -0.33114027 0.00000000 0.33114027 -0.94358154 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -40.60000 -0.69051640 0.72331674 0.00000000 -0.72331674 -0.69051640 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -37.70000 0.37454186 0.92721000 0.00000000 -0.92721000 0.37454186 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -34.80000 0.99916827 0.04077704 0.00000000 -0.04077704 0.99916827 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -31.90000 0.44885117 -0.89360653 0.00000000 0.89360653 0.44885117 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -29.00000 -0.62927970 -0.77717891 0.00000000 0.77717891 -0.62927970 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -26.10000 -0.96742700 0.25315014 0.00000000 -0.25315014 -0.96742700 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -23.20000 -0.16795604 0.98579449 0.00000000 -0.98579449 -0.16795604 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -20.30000 0.82901805 0.55922184 0.00000000 -0.55922184 0.82901805 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -17.40000 0.85113194 -0.52495182 0.00000000 0.52495182 0.85113194 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -14.50000 -0.12761857 -0.99182332 0.00000000 0.99182332 -0.12761857 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -11.60000 -0.95629965 -0.29238840 0.00000000 0.29238840 -0.95629965 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -8.70000 -0.66044736 0.75087235 0.00000000 -0.75087235 -0.66044736 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -5.80000 0.41203922 0.91116611 0.00000000 -0.91116611 0.41203922 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -2.90000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 1_555 x,y,z identity operation 0.00000 0.00000 -0.00000 0.41203922 -0.91116611 0.00000000 0.91116611 0.41203922 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 2.90000 -0.66044736 -0.75087235 0.00000000 0.75087235 -0.66044736 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 5.80000 -0.95629965 0.29238840 0.00000000 -0.29238840 -0.95629965 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 8.70000 -0.12761857 0.99182332 0.00000000 -0.99182332 -0.12761857 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 11.60000 0.85113194 0.52495182 0.00000000 -0.52495182 0.85113194 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 14.50000 0.82901805 -0.55922184 0.00000000 0.55922184 0.82901805 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 17.40000 -0.16795604 -0.98579449 0.00000000 0.98579449 -0.16795604 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 20.30000 -0.96742700 -0.25315014 0.00000000 0.25315014 -0.96742700 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 23.20000 -0.62927970 0.77717891 0.00000000 -0.77717891 -0.62927970 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 26.10000 0.44885117 0.89360653 0.00000000 -0.89360653 0.44885117 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 29.00000 0.99916827 -0.04077704 0.00000000 0.04077704 0.99916827 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 31.90000 0.37454186 -0.92721000 0.00000000 0.92721000 0.37454186 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 34.80000 -0.69051640 -0.72331674 0.00000000 0.72331674 -0.69051640 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 37.70000 -0.94358154 0.33114027 0.00000000 -0.33114027 -0.94358154 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 40.60000 -0.08706881 0.99620230 0.00000000 -0.99620230 -0.08706881 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 43.50000 0.87183001 0.48980857 0.00000000 -0.48980857 0.87183001 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 46.40000 0.80552512 -0.59256162 0.00000000 0.59256162 0.80552512 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 49.30000 PARHCSDX.PRO TOPHCSDX.PRO TOPH19.PEP 19.0 MODEL REFINED WITH A VERSION OF X-PLOR 3.1 MODIFIED FOR USE WITH FIBRE DIFFRACTION DATA BY WANG & STUBBS (1993) ACTA CRYST. A49, 504-513. 0.39 0.01 0.17 0.17 3.1 12.0 211 1734 12.2 1 A POSTERIORI MOLECULAR REPLACEMENT 1IFN 3.1 12.0 0 326 0 0 326 0.017 2.4 16.1 2.4 1 STRICT NCS WAS IMPOSED ON THE MODEL THROUGHOUT THE REFINEMENT. 1 X-RAY DIFFRACTION 0.251 3.43 112 4 3.1 60.0 1IFP 1 model building X-PLOR refinement X-PLOR data reduction CCP13 (LSQINT) data scaling CCP13-FDSCALE phasing X-PLOR INOVIRUS (FILAMENTOUS BACTERIOPHAGE) STRAIN PF3 MAJOR COAT PROTEIN ASSEMBLY 1 Y N A GLN 2 A GLN 2 HELX_P A GLN 42 A GLN 42 1 1 41 VIRUS VIRUS COAT PROTEIN, Helical virus, Virus COAT1_BPPF3 UNP 1 1 P03623 MQSVITDVTGQLTAVQADITTIGGAIIVLAAVVLGIRWIKAQFF 1 44 1IFP 1 44 P03623 A 1 1 44 1 P 1