1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Goetz, M.
Carlotti, C.
Bontems, F.
Dufourc, E.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90
90
90
1
1
1
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
40
6534
6540
10.1021/bi0027938
11371217
Evidence for an alpha-helix --> pi-bulge helicity modulation for the neu/erbB-2 membrane-spanning segment. A 1H NMR and circular dichroism study.
2001
10.2210/pdb1iij/pdb
pdb_00001iij
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
3894.845
ERBB-2 RECEPTOR PROTEIN-TYROSINE KINASE
2.7.1.112
TRANSMEMBRANE DOMAIN, RESIDUES 650-684
1
syn
polymer
no
no
EQRASPVTFIIATVVGVLLFLILVVVVGILIKRRR
EQRASPVTFIIATVVGVLLFLILVVVVGILIKRRR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2001-06-27
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
RCSB
Y
RCSB
2001-04-23
REL
This peptide was chemically synthesized. This sequence occurs naturally in Rattus norvegicus (rat).
sample
structures with the lowest energy
20
5
DQF-COSY
2D NOESY
HOHAHA
0
ATMOSPHERIC
atm
300
K
Structures based 385 NOE restraints, 111 dihedral angles
molecular dynamics
1
lowest energy
1.5 mM neu-tm35 peptide
deuterated TFE
structure solution
DYANA
structure solution
Discover
Ver. 97.0
collection
XwinNMR
refinement
Discover
Ver. 97.0
400
Bruker
AVANCE
600
Bruker
AVANCE
500
Bruker
AVANCE
GLU
1
n
1
GLU
1
A
GLN
2
n
2
GLN
2
A
ARG
3
n
3
ARG
3
A
ALA
4
n
4
ALA
4
A
SER
5
n
5
SER
5
A
PRO
6
n
6
PRO
6
A
VAL
7
n
7
VAL
7
A
THR
8
n
8
THR
8
A
PHE
9
n
9
PHE
9
A
ILE
10
n
10
ILE
10
A
ILE
11
n
11
ILE
11
A
ALA
12
n
12
ALA
12
A
THR
13
n
13
THR
13
A
VAL
14
n
14
VAL
14
A
VAL
15
n
15
VAL
15
A
GLY
16
n
16
GLY
16
A
VAL
17
n
17
VAL
17
A
LEU
18
n
18
LEU
18
A
LEU
19
n
19
LEU
19
A
PHE
20
n
20
PHE
20
A
LEU
21
n
21
LEU
21
A
ILE
22
n
22
ILE
22
A
LEU
23
n
23
LEU
23
A
VAL
24
n
24
VAL
24
A
VAL
25
n
25
VAL
25
A
VAL
26
n
26
VAL
26
A
VAL
27
n
27
VAL
27
A
GLY
28
n
28
GLY
28
A
ILE
29
n
29
ILE
29
A
LEU
30
n
30
LEU
30
A
ILE
31
n
31
ILE
31
A
LYS
32
n
32
LYS
32
A
ARG
33
n
33
ARG
33
A
ARG
34
n
34
ARG
34
A
ARG
35
n
35
ARG
35
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
4.21
0.50
120.30
124.51
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
3
3
3
N
1
-3.01
0.50
120.30
117.29
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
3
3
3
N
1
4.10
0.50
120.30
124.40
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
33
33
33
N
1
-3.05
0.50
120.30
117.25
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
33
33
33
N
1
4.01
0.50
120.30
124.31
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
34
34
34
N
1
4.51
0.50
120.30
124.81
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
35
35
35
N
1
-3.17
0.50
120.30
117.13
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
35
35
35
N
2
4.41
0.50
120.30
124.71
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
3
3
3
N
2
-3.08
0.50
120.30
117.22
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
3
3
3
N
2
4.69
0.50
120.30
124.99
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
33
33
33
N
2
4.15
0.50
120.30
124.45
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
34
34
34
N
2
4.28
0.50
120.30
124.58
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
35
35
35
N
2
-3.09
0.50
120.30
117.21
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
35
35
35
N
3
4.19
0.50
120.30
124.49
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
3
3
3
N
3
-3.02
0.50
120.30
117.28
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
3
3
3
N
3
4.15
0.50
120.30
124.45
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
33
33
33
N
3
-3.06
0.50
120.30
117.24
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
33
33
33
N
3
4.12
0.50
120.30
124.42
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
34
34
34
N
3
4.09
0.50
120.30
124.39
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
35
35
35
N
4
4.38
0.50
120.30
124.68
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
3
3
3
N
4
-3.05
0.50
120.30
117.25
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
3
3
3
N
4
4.10
0.50
120.30
124.40
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
33
33
33
N
4
4.24
0.50
120.30
124.54
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
34
34
34
N
4
-3.02
0.50
120.30
117.28
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
34
34
34
N
4
4.25
0.50
120.30
124.55
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
35
35
35
N
5
4.20
0.50
120.30
124.50
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
3
3
3
N
5
-3.04
0.50
120.30
117.26
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
3
3
3
N
5
4.13
0.50
120.30
124.43
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
33
33
33
N
5
4.27
0.50
120.30
124.57
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
34
34
34
N
5
4.39
0.50
120.30
124.69
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
35
35
35
N
5
-3.07
0.50
120.30
117.23
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
35
35
35
N
1
A
A
CD
OE2
GLU
GLU
1
1
0.108
0.011
1.252
1.360
N
1
A
A
C
OXT
ARG
ARG
35
35
0.137
0.019
1.229
1.366
N
2
A
A
CD
OE2
GLU
GLU
1
1
0.107
0.011
1.252
1.359
N
2
A
A
C
OXT
ARG
ARG
35
35
0.134
0.019
1.229
1.363
N
3
A
A
CD
OE2
GLU
GLU
1
1
0.107
0.011
1.252
1.359
N
3
A
A
C
OXT
ARG
ARG
35
35
0.135
0.019
1.229
1.364
N
4
A
A
CD
OE2
GLU
GLU
1
1
0.107
0.011
1.252
1.359
N
4
A
A
C
OXT
ARG
ARG
35
35
0.137
0.019
1.229
1.366
N
5
A
A
CD
OE2
GLU
GLU
1
1
0.108
0.011
1.252
1.360
N
5
A
A
C
OXT
ARG
ARG
35
35
0.137
0.019
1.229
1.366
N
2
A
ARG
34
-106.71
76.21
3
A
SER
5
-146.32
-64.52
3
A
LEU
23
-93.01
-61.36
4
A
VAL
26
-76.00
-73.91
SOLUTION STRUCTURE OF THE NEU/ERBB-2 MEMBRANE SPANNING SEGMENT
1
N
N
A
ARG
3
A
ARG
3
HELX_P
A
VAL
24
A
VAL
24
1
1
22
A
GLY
28
A
GLY
28
HELX_P
A
ARG
34
A
ARG
34
1
2
7
SIGNALING PROTEIN
alpha-helix-pi-bulge-alpha-helix, SIGNALING PROTEIN
ERBB2_RAT
UNP
1
647
P06494
EQRASPVTFIIATVVGVLLFLILVVVVGILIKRRR
647
681
1IIJ
1
35
P06494
A
1
1
35