0.016868 0.009739 0.000000 0.000000 0.019478 0.000000 0.000000 0.000000 0.005922 0.00000 0.00000 0.00000 Toth, J. Cutforth, T. Gelinas, A.D. Bethoney, K.A. Bard, J. Harrison, C.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90 90 120 59.283 59.283 168.868 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H12 O6 180.156 alpha-D-mannopyranose D-saccharide, alpha linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Dev.Cell 1534-5807 1 83 92 10.1016/S1534-5807(01)00002-8 11703926 Crystal structure of an ephrin ectodomain. 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 double mirrors CCD 2000-02-02 SBC-2 Two Rosenbaum-Rock monochromators double crystal SINGLE WAVELENGTH M x-ray 1 1.033 1.0 19-ID APS 1.033 SYNCHROTRON APS BEAMLINE 19-ID 19898.439 EPHRIN-B2 ECTODOMAIN, RESIDUES 30-207 1 man polymer 586.542 alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 18.015 water 201 nat water EPH-RELATED RECEPTOR TYROSINE KINASE LIGAND 5, LERK-5, HTK LIGAND, HTK-L, ELF-2 no no SIVLEPIYWNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQ DVKFTIKFQEFSPNLWGLEFQKNKDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASSAGSARNHGPTRRPELE AGTNGRSSTTSPFVKPNP SIVLEPIYWNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQ DVKFTIKFQEFSPNLWGLEFQKNKDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASSAGSARNHGPTRRPELE AGTNGRSSTTSPFVKPNP P polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Pichia sample ephrin-B2 10090 Mus musculus 4922 Pichia pastoris plasmid PIC-Zalpha 1 2.16 43 VAPOR DIFFUSION, HANGING DROP 8.5 magnesium chloride, PEG 4000, trishydroxyethylmethane, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K 277.0 atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_struct_special_symmetry pdbx_validate_close_contact struct_asym struct_conn struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Version format compliance Non-polymer description Version format compliance Advisory Atomic model Data collection Derived calculations Structure summary 1 0 2002-05-03 1 1 2008-04-27 1 2 2011-07-13 2 0 2020-07-29 _atom_site.auth_asym_id _atom_site.label_asym_id _atom_site.label_entity_id _chem_comp.name _chem_comp.type _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_special_symmetry.label_asym_id _pdbx_validate_close_contact.auth_asym_id_1 _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_label_asym_id A NAG 1 n A NAG 1 A NAG 2 n A NAG 2 A MAN 3 n A MAN 3 DManpa a-D-mannopyranose a-D-Manp Man DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc SEQUENCE SOME AMBIGUITY IN THE EXACT C-TERMINUS SEQUENCE EXISTS DUE TO A GLU-C DIGEST. RCSB Y RCSB 2001-05-03 REL oligosaccharide DManpa1-4DGlcpNAcb1-4DGlcpNAcb1- 2 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5]/1-1-2/a4-b1_b4-c1 2 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}}} 2 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 2 O1 HO4 sing C1 O4 MAN NAG 3 2 2 O1 HO4 sing n n n HOH water WAT 1 3 HOH HOH 208 P WAT 2 3 HOH HOH 209 P WAT 3 3 HOH HOH 210 P WAT 4 3 HOH HOH 211 P WAT 5 3 HOH HOH 212 P WAT 6 3 HOH HOH 213 P WAT 7 3 HOH HOH 214 P WAT 8 3 HOH HOH 215 P WAT 9 3 HOH HOH 216 P WAT 10 3 HOH HOH 217 P WAT 11 3 HOH HOH 218 P WAT 12 3 HOH HOH 219 P WAT 13 3 HOH HOH 220 P WAT 14 3 HOH HOH 221 P WAT 15 3 HOH HOH 222 P WAT 16 3 HOH HOH 223 P WAT 17 3 HOH HOH 224 P WAT 18 3 HOH HOH 225 P WAT 19 3 HOH HOH 226 P WAT 20 3 HOH HOH 227 P WAT 21 3 HOH HOH 228 P WAT 22 3 HOH HOH 229 P WAT 23 3 HOH HOH 230 P WAT 24 3 HOH HOH 231 P WAT 25 3 HOH HOH 232 P WAT 26 3 HOH HOH 233 P WAT 27 3 HOH HOH 234 P WAT 28 3 HOH HOH 235 P WAT 29 3 HOH HOH 236 P WAT 30 3 HOH HOH 237 P WAT 31 3 HOH HOH 238 P WAT 32 3 HOH HOH 239 P WAT 33 3 HOH HOH 240 P WAT 34 3 HOH HOH 241 P WAT 35 3 HOH HOH 242 P WAT 36 3 HOH HOH 243 P WAT 37 3 HOH HOH 244 P WAT 38 3 HOH HOH 245 P WAT 39 3 HOH HOH 246 P WAT 40 3 HOH HOH 247 P WAT 41 3 HOH HOH 248 P WAT 42 3 HOH HOH 249 P WAT 43 3 HOH HOH 250 P WAT 44 3 HOH HOH 251 P WAT 45 3 HOH HOH 252 P WAT 46 3 HOH HOH 253 P WAT 47 3 HOH HOH 254 P WAT 48 3 HOH HOH 255 P WAT 49 3 HOH HOH 256 P WAT 50 3 HOH HOH 257 P WAT 51 3 HOH HOH 258 P WAT 52 3 HOH HOH 259 P WAT 53 3 HOH HOH 260 P WAT 54 3 HOH HOH 261 P WAT 55 3 HOH HOH 262 P WAT 56 3 HOH HOH 263 P WAT 57 3 HOH HOH 264 P WAT 58 3 HOH HOH 265 P WAT 59 3 HOH HOH 266 P WAT 60 3 HOH HOH 267 P WAT 61 3 HOH HOH 268 P WAT 62 3 HOH HOH 269 P WAT 63 3 HOH HOH 270 P WAT 64 3 HOH HOH 271 P WAT 65 3 HOH HOH 272 P WAT 66 3 HOH HOH 273 P WAT 67 3 HOH HOH 274 P WAT 68 3 HOH HOH 275 P WAT 69 3 HOH HOH 276 P WAT 70 3 HOH HOH 277 P WAT 71 3 HOH HOH 278 P WAT 72 3 HOH HOH 279 P WAT 73 3 HOH HOH 280 P WAT 74 3 HOH HOH 281 P WAT 75 3 HOH HOH 282 P WAT 76 3 HOH HOH 283 P WAT 77 3 HOH HOH 284 P WAT 78 3 HOH HOH 285 P WAT 79 3 HOH HOH 286 P WAT 80 3 HOH HOH 287 P WAT 81 3 HOH HOH 288 P WAT 82 3 HOH HOH 289 P WAT 83 3 HOH HOH 290 P WAT 84 3 HOH HOH 291 P WAT 85 3 HOH HOH 292 P WAT 86 3 HOH HOH 293 P WAT 87 3 HOH HOH 294 P WAT 88 3 HOH HOH 295 P WAT 89 3 HOH HOH 296 P WAT 90 3 HOH HOH 297 P WAT 91 3 HOH HOH 298 P WAT 92 3 HOH HOH 299 P WAT 93 3 HOH HOH 300 P WAT 94 3 HOH HOH 301 P WAT 95 3 HOH HOH 302 P WAT 96 3 HOH HOH 303 P WAT 97 3 HOH HOH 304 P WAT 98 3 HOH HOH 305 P WAT 99 3 HOH HOH 306 P WAT 100 3 HOH HOH 307 P WAT 101 3 HOH HOH 308 P WAT 102 3 HOH HOH 309 P WAT 103 3 HOH HOH 310 P WAT 104 3 HOH HOH 311 P WAT 105 3 HOH HOH 312 P WAT 106 3 HOH HOH 313 P WAT 107 3 HOH HOH 314 P WAT 108 3 HOH HOH 315 P WAT 109 3 HOH HOH 316 P WAT 110 3 HOH HOH 317 P WAT 111 3 HOH HOH 318 P WAT 112 3 HOH HOH 319 P WAT 113 3 HOH HOH 320 P WAT 115 3 HOH HOH 321 P WAT 116 3 HOH HOH 322 P WAT 117 3 HOH HOH 323 P WAT 118 3 HOH HOH 324 P WAT 119 3 HOH HOH 325 P WAT 120 3 HOH HOH 326 P WAT 121 3 HOH HOH 327 P WAT 122 3 HOH HOH 328 P WAT 123 3 HOH HOH 329 P WAT 124 3 HOH HOH 330 P WAT 125 3 HOH HOH 331 P WAT 126 3 HOH HOH 332 P WAT 127 3 HOH HOH 333 P WAT 128 3 HOH HOH 334 P WAT 129 3 HOH HOH 335 P WAT 130 3 HOH HOH 336 P WAT 131 3 HOH HOH 337 P WAT 132 3 HOH HOH 338 P WAT 133 3 HOH HOH 339 P WAT 134 3 HOH HOH 340 P WAT 135 3 HOH HOH 341 P WAT 136 3 HOH HOH 342 P WAT 137 3 HOH HOH 343 P WAT 138 3 HOH HOH 344 P WAT 139 3 HOH HOH 345 P WAT 140 3 HOH HOH 346 P WAT 141 3 HOH HOH 347 P WAT 142 3 HOH HOH 348 P WAT 143 3 HOH HOH 349 P WAT 144 3 HOH HOH 350 P WAT 145 3 HOH HOH 351 P WAT 146 3 HOH HOH 352 P WAT 147 3 HOH HOH 353 P WAT 148 3 HOH HOH 354 P WAT 149 3 HOH HOH 355 P WAT 150 3 HOH HOH 356 P WAT 151 3 HOH HOH 357 P WAT 152 3 HOH HOH 358 P WAT 153 3 HOH HOH 359 P WAT 154 3 HOH HOH 360 P WAT 155 3 HOH HOH 361 P WAT 156 3 HOH HOH 362 P WAT 157 3 HOH HOH 363 P WAT 158 3 HOH HOH 364 P WAT 159 3 HOH HOH 365 P WAT 160 3 HOH HOH 366 P WAT 161 3 HOH HOH 367 P WAT 162 3 HOH HOH 368 P WAT 163 3 HOH HOH 369 P WAT 164 3 HOH HOH 370 P WAT 165 3 HOH HOH 371 P WAT 166 3 HOH HOH 372 P WAT 167 3 HOH HOH 373 P WAT 168 3 HOH HOH 374 P WAT 169 3 HOH HOH 375 P WAT 170 3 HOH HOH 376 P WAT 171 3 HOH HOH 377 P WAT 172 3 HOH HOH 378 P WAT 173 3 HOH HOH 379 P WAT 174 3 HOH HOH 380 P WAT 175 3 HOH HOH 381 P WAT 176 3 HOH HOH 382 P WAT 177 3 HOH HOH 383 P WAT 178 3 HOH HOH 384 P WAT 179 3 HOH HOH 385 P WAT 180 3 HOH HOH 386 P WAT 181 3 HOH HOH 387 P WAT 182 3 HOH HOH 388 P WAT 183 3 HOH HOH 389 P WAT 184 3 HOH HOH 390 P WAT 185 3 HOH HOH 391 P WAT 186 3 HOH HOH 392 P WAT 187 3 HOH HOH 393 P WAT 188 3 HOH HOH 394 P WAT 189 3 HOH HOH 395 P WAT 190 3 HOH HOH 396 P WAT 191 3 HOH HOH 397 P WAT 192 3 HOH HOH 398 P WAT 193 3 HOH HOH 399 P WAT 194 3 HOH HOH 400 P WAT 195 3 HOH HOH 401 P WAT 196 3 HOH HOH 402 P WAT 197 3 HOH HOH 403 P WAT 198 3 HOH HOH 404 P WAT 199 3 HOH HOH 405 P WAT 200 3 HOH HOH 406 P WAT 201 3 HOH HOH 407 P WAT 202 3 HOH HOH 408 P SER 30 n 1 SER 30 P ILE 31 n 2 ILE 31 P VAL 32 n 3 VAL 32 P LEU 33 n 4 LEU 33 P GLU 34 n 5 GLU 34 P PRO 35 n 6 PRO 35 P ILE 36 n 7 ILE 36 P TYR 37 n 8 TYR 37 P TRP 38 n 9 TRP 38 P ASN 39 n 10 ASN 39 P SER 40 n 11 SER 40 P SER 41 n 12 SER 41 P ASN 42 n 13 ASN 42 P SER 43 n 14 SER 43 P LYS 44 n 15 LYS 44 P PHE 45 n 16 PHE 45 P LEU 46 n 17 LEU 46 P PRO 47 n 18 PRO 47 P GLY 48 n 19 GLY 48 P GLN 49 n 20 GLN 49 P GLY 50 n 21 GLY 50 P LEU 51 n 22 LEU 51 P VAL 52 n 23 VAL 52 P LEU 53 n 24 LEU 53 P TYR 54 n 25 TYR 54 P PRO 55 n 26 PRO 55 P GLN 56 n 27 GLN 56 P ILE 57 n 28 ILE 57 P GLY 58 n 29 GLY 58 P ASP 59 n 30 ASP 59 P LYS 60 n 31 LYS 60 P LEU 61 n 32 LEU 61 P ASP 62 n 33 ASP 62 P ILE 63 n 34 ILE 63 P ILE 64 n 35 ILE 64 P CYS 65 n 36 CYS 65 P PRO 66 n 37 PRO 66 P LYS 67 n 38 LYS 67 P VAL 68 n 39 VAL 68 P ASP 69 n 40 ASP 69 P SER 70 n 41 SER 70 P LYS 71 n 42 LYS 71 P THR 72 n 43 THR 72 P VAL 73 n 44 VAL 73 P GLY 74 n 45 GLY 74 P GLN 75 n 46 GLN 75 P TYR 76 n 47 TYR 76 P GLU 77 n 48 GLU 77 P TYR 78 n 49 TYR 78 P TYR 79 n 50 TYR 79 P LYS 80 n 51 LYS 80 P VAL 81 n 52 VAL 81 P TYR 82 n 53 TYR 82 P MET 83 n 54 MET 83 P VAL 84 n 55 VAL 84 P ASP 85 n 56 ASP 85 P LYS 86 n 57 LYS 86 P ASP 87 n 58 ASP 87 P GLN 88 n 59 GLN 88 P ALA 89 n 60 ALA 89 P ASP 90 n 61 ASP 90 P ARG 91 n 62 ARG 91 P CYS 92 n 63 CYS 92 P THR 93 n 64 THR 93 P ILE 94 n 65 ILE 94 P LYS 95 n 66 LYS 95 P LYS 96 n 67 LYS 96 P GLU 97 n 68 GLU 97 P ASN 98 n 69 ASN 98 P THR 99 n 70 THR 99 P PRO 100 n 71 PRO 100 P LEU 101 n 72 LEU 101 P LEU 102 n 73 LEU 102 P ASN 103 n 74 ASN 103 P CYS 104 n 75 CYS 104 P ALA 105 n 76 ALA 105 P ARG 106 n 77 ARG 106 P PRO 107 n 78 PRO 107 P ASP 108 n 79 ASP 108 P GLN 109 n 80 GLN 109 P ASP 110 n 81 ASP 110 P VAL 111 n 82 VAL 111 P LYS 112 n 83 LYS 112 P PHE 113 n 84 PHE 113 P THR 114 n 85 THR 114 P ILE 115 n 86 ILE 115 P LYS 116 n 87 LYS 116 P PHE 117 n 88 PHE 117 P GLN 118 n 89 GLN 118 P GLU 119 n 90 GLU 119 P PHE 120 n 91 PHE 120 P SER 121 n 92 SER 121 P PRO 122 n 93 PRO 122 P ASN 123 n 94 ASN 123 P LEU 124 n 95 LEU 124 P TRP 125 n 96 TRP 125 P GLY 126 n 97 GLY 126 P LEU 127 n 98 LEU 127 P GLU 128 n 99 GLU 128 P PHE 129 n 100 PHE 129 P GLN 130 n 101 GLN 130 P LYS 131 n 102 LYS 131 P ASN 132 n 103 ASN 132 P LYS 133 n 104 LYS 133 P ASP 134 n 105 ASP 134 P TYR 135 n 106 TYR 135 P TYR 136 n 107 TYR 136 P ILE 137 n 108 ILE 137 P ILE 138 n 109 ILE 138 P SER 139 n 110 SER 139 P THR 140 n 111 THR 140 P SER 141 n 112 SER 141 P ASN 142 n 113 ASN 142 P GLY 143 n 114 GLY 143 P SER 144 n 115 SER 144 P LEU 145 n 116 LEU 145 P GLU 146 n 117 GLU 146 P GLY 147 n 118 GLY 147 P LEU 148 n 119 LEU 148 P ASP 149 n 120 ASP 149 P ASN 150 n 121 ASN 150 P GLN 151 n 122 GLN 151 P GLU 152 n 123 GLU 152 P GLY 153 n 124 GLY 153 P GLY 154 n 125 GLY 154 P VAL 155 n 126 VAL 155 P CYS 156 n 127 CYS 156 P GLN 157 n 128 GLN 157 P THR 158 n 129 THR 158 P ARG 159 n 130 ARG 159 P ALA 160 n 131 ALA 160 P MET 161 n 132 MET 161 P LYS 162 n 133 LYS 162 P ILE 163 n 134 ILE 163 P LEU 164 n 135 LEU 164 P MET 165 n 136 MET 165 P LYS 166 n 137 LYS 166 P VAL 167 n 138 VAL 167 P GLY 168 n 139 GLY 168 P GLN 169 n 140 GLN 169 P ASP 170 n 141 ASP 170 P n 142 171 P n 143 172 P n 144 173 P n 145 174 P n 146 175 P n 147 176 P n 148 177 P n 149 178 P n 150 179 P n 151 180 P n 152 181 P n 153 182 P n 154 183 P n 155 184 P n 156 185 P n 157 186 P n 158 187 P n 159 188 P n 160 189 P n 161 190 P n 162 191 P n 163 192 P n 164 193 P n 165 194 P n 166 195 P n 167 196 P n 168 197 P n 169 198 P n 170 199 P n 171 200 P n 172 201 P n 173 202 P n 174 203 P n 175 204 P n 176 205 P n 177 206 P n 178 207 P author_defined_assembly 1 monomeric P ASN 39 GLYCOSYLATION SITE A ASN 10 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 P N ILE 36 A N ILE 7 P O ASP 62 A O ASP 33 P O ILE 63 A O ILE 34 P N PHE 113 A N PHE 84 P N LEU 51 A N LEU 22 P O LYS 162 A O LYS 133 P N VAL 167 A N VAL 138 P O LYS 133 A O LYS 104 P O ILE 138 A O ILE 109 P N TYR 82 A N TYR 53 P N VAL 81 A N VAL 52 P O LEU 102 A O LEU 73 1 P HOH 293 C HOH 1 P HOH 299 C HOH 1 P HOH 326 C HOH 1 P HOH 395 C HOH 1 P CD LYS 95 A CD LYS 66 1 Y 1 P CE LYS 95 A CE LYS 66 1 Y 1 P NZ LYS 95 A NZ LYS 66 1 Y 1 P CB LYS 96 A CB LYS 67 1 Y 1 P CG LYS 96 A CG LYS 67 1 Y 1 P CD LYS 96 A CD LYS 67 1 Y 1 P CE LYS 96 A CE LYS 67 1 Y 1 P NZ LYS 96 A NZ LYS 67 1 Y 1 P CE LYS 133 A CE LYS 104 1 Y 1 P NZ LYS 133 A NZ LYS 104 1 Y 1 P ALA 171 A ALA 142 1 Y 1 P SER 172 A SER 143 1 Y 1 P SER 173 A SER 144 1 Y 1 P ALA 174 A ALA 145 1 Y 1 P GLY 175 A GLY 146 1 Y 1 P SER 176 A SER 147 1 Y 1 P ALA 177 A ALA 148 1 Y 1 P ARG 178 A ARG 149 1 Y 1 P ASN 179 A ASN 150 1 Y 1 P HIS 180 A HIS 151 1 Y 1 P GLY 181 A GLY 152 1 Y 1 P PRO 182 A PRO 153 1 Y 1 P THR 183 A THR 154 1 Y 1 P ARG 184 A ARG 155 1 Y 1 P ARG 185 A ARG 156 1 Y 1 P PRO 186 A PRO 157 1 Y 1 P GLU 187 A GLU 158 1 Y 1 P LEU 188 A LEU 159 1 Y 1 P GLU 189 A GLU 160 1 Y 1 P ALA 190 A ALA 161 1 Y 1 P GLY 191 A GLY 162 1 Y 1 P THR 192 A THR 163 1 Y 1 P ASN 193 A ASN 164 1 Y 1 P GLY 194 A GLY 165 1 Y 1 P ARG 195 A ARG 166 1 Y 1 P SER 196 A SER 167 1 Y 1 P SER 197 A SER 168 1 Y 1 P THR 198 A THR 169 1 Y 1 P THR 199 A THR 170 1 Y 1 P SER 200 A SER 171 1 Y 1 P PRO 201 A PRO 172 1 Y 1 P PHE 202 A PHE 173 1 Y 1 P VAL 203 A VAL 174 1 Y 1 P LYS 204 A LYS 175 1 Y 1 P PRO 205 A PRO 176 1 Y 1 P ASN 206 A ASN 177 1 Y 1 P PRO 207 A PRO 178 1 Y 1 P P O O HOH HOH 387 403 1.88 1 P P OG O SER HOH 30 381 2.11 1 P P O O HOH HOH 313 408 2.12 1 P P O O HOH HOH 377 378 2.17 1 P P O O HOH HOH 345 347 2.19 1 A P O4 O MAN HOH 3 386 2.19 1 P ASP 69 -125.41 -113.02 37.4 3.32 2.93 .00 3.32 .00 -6.64 0.249 0.216 0.216 1.92 19.41 1410 14067 13862 97.7 random 10000 1 restrained THROUGHOUT 2 0 SIRAS MAXIMUM LIKELIHOOD FUNCTION 0.30 0.25 6.0 0.24 0.20 1.92 19.41 201 1360 39 0 1120 0.011 1.62 26 1.06 0.2925 0.2487 1.99 37 399 28 7.69 90.64 20.0 1.92 19.41 1IKO 13862 13862 0 0 0.042 1 48.0 22 99.5 1.92 1.99 18.0 0.219 1 10 99.8 data collection HKL-2000 data reduction HKL-2000 phasing SHARP refinement CNS data scaling HKL-2000 EPHRIN-B2 CRYSTAL STRUCTURE OF THE MURINE EPHRIN-B2 ECTODOMAIN 1 N N 2 N N 3 N N P ASP 85 A ASP 56 HELX_P P CYS 92 A CYS 63 1 1 8 P SER 144 A SER 115 HELX_P P LEU 148 A LEU 119 5 2 5 P GLY 153 A GLY 124 HELX_P P ARG 159 A ARG 130 1 3 7 disulf 2.039 P CYS 65 A SG CYS 36 1_555 P CYS 104 A SG CYS 75 1_555 disulf 2.065 P CYS 92 A SG CYS 63 1_555 P CYS 156 A SG CYS 127 1_555 covale 1.450 one N-Glycosylation P ASN 39 A ND2 ASN 10 1_555 A NAG 1 B C1 NAG 1_555 covale 1.383 both A NAG 1 B O4 NAG 1_555 A NAG 2 B C1 NAG 1_555 covale 1.376 both A NAG 2 B O4 NAG 1_555 A MAN 3 B C1 MAN 1_555 SIGNALING PROTEIN GREEK KEY, GLYCOSYLATION, SIGNALING PROTEIN EFB2_MOUSE UNP 1 1 P52800 MAMARSRRDSVWKYCWGLLMVLCRTAISRSIVLEPIYWNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYK VYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNKDYYIISTSNGSLEGLDNQEGGVCQTRA MKILMKVGQDASSAGSARNHGPTRRPELEAGTNGRSSTTSPFVKPNPGSSTDGNSAGHSGNNLLGSEVALFAGIASGCII FIVIIITLVVLLLKYRRRHRKHSPQHTTTLSLSTLATPKRGGNNNGSEPSDVIIPLRTADSVFCPHYEKVSGDYGHPVYI VQEMPPQSPANIYYKV 30 207 1IKO 30 207 P52800 P 1 1 178 3 5 parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel P ILE 36 A ILE 7 P TYR 37 A TYR 8 P LYS 60 A LYS 31 P ILE 64 A ILE 35 P LYS 112 A LYS 83 P LYS 116 A LYS 87 P LEU 51 A LEU 22 P LEU 53 A LEU 24 P LYS 162 A LYS 133 P VAL 167 A VAL 138 P LYS 133 A LYS 104 P ILE 138 A ILE 109 P TYR 79 A TYR 50 P VAL 84 A VAL 55 P LEU 102 A LEU 73 P CYS 104 A CYS 75 179 P 65 2 2