0.025112 -0.014557 -0.003500 0.000000 0.028782 -0.005253 0.000000 0.000000 0.026499 0.00000 0.00000 0.00000 Hizver, J. Rozenberg, H. Frolow, F. Rabinovich, D. Shakked, Z. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 74.42 76.44 59.90 39.821 40.160 39.460 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C Y 13 N N Y 14 N C Y 15 N N Y 16 N C Y 17 N C N 18 N N Y 19 N N Y 20 N C Y 21 N N Y 22 N C N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N O N 38 N P N 39 N O N 40 N O N 41 N O N 42 N C N 43 R C N 44 N O N 45 S C N 46 N O N 47 N C N 48 R C N 49 N N N 50 N C N 51 N O N 52 N N N 53 N C N 54 N N N 55 N C N 56 N C N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N O N 72 N P N 73 N O N 74 N O N 75 N O N 76 N C N 77 R C N 78 N O N 79 S C N 80 N O N 81 N C N 82 R C Y 83 N N Y 84 N C Y 85 N N Y 86 N C N 87 N C N 88 N O N 89 N N N 90 N C N 91 N N N 92 N N Y 93 N C N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N O N 109 N P N 110 N O N 111 N O N 112 N O N 113 N C N 114 R C N 115 N O N 116 S C N 117 N O N 118 N C N 119 R C N 120 N N N 121 N C N 122 N O N 123 N N N 124 N C N 125 N O N 126 N C N 127 N C N 128 N C N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 98 8490 8495 10.1073/pnas.151247298 11438706 DNA bending by an adenine--thymine tract and its role in gene regulation. 2001 10.2210/pdb1ilc/pdb pdb_00001ilc 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 Yale-type mirrors IMAGE PLATE 1997-11-10 RIGAKU RAXIS IIC Ni filter + Yale-type mirrors SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU FR-C Human papillomavirus E2 DNA target 3662.404 5'-D(*AP*CP*CP*GP*AP*AP*TP*TP*CP*GP*GP*T)-3' 6 syn polymer 18.015 water 114 nat water no no (DA)(DC)(DC)(DG)(DA)(DA)(DT)(DT)(DC)(DG)(DG)(DT) ACCGAATTCGGT A,B,C,D,E,F polydeoxyribonucleotide n n n n n n n n n n n n 1 2.29 57 VAPOR DIFFUSION, HANGING DROP 7.0 MPD, magnesium chloride, spermine.4HCl, Na cacodylate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 292.0K 292.0 MPD 1 Mg2Cl 1 spermine.4HCl 1 Na cacodylate 1 MPD 2 -6.136 1 20 A 1 B 24 2.350 A_DA1:DT24_B 1 -11.185 -0.061 -0.218 -0.363 2.541 1 19 A 2 B 23 -0.880 A_DC2:DG23_B 2 -3.408 -0.057 -0.086 -0.288 6.339 1 19 A 3 B 22 -1.503 A_DC3:DG22_B 3 -3.304 0.270 -0.236 -0.312 11.242 1 19 A 4 B 21 -2.196 A_DG4:DC21_B 4 -10.069 -0.032 0.123 -0.195 3.673 1 20 A 5 B 20 5.796 A_DA5:DT20_B 5 -10.872 0.230 -0.016 -0.123 -1.056 1 20 A 6 B 19 1.350 A_DA6:DT19_B 6 -12.422 0.377 0.242 -0.082 -5.526 1 20 A 7 B 18 -3.800 A_DT7:DA18_B 7 -14.580 -0.065 0.338 -0.019 -17.026 1 20 A 8 B 17 0.727 A_DT8:DA17_B 8 -21.023 -0.115 0.399 -0.161 -17.746 1 19 A 9 B 16 1.812 A_DC9:DG16_B 9 0.747 0.299 0.331 -0.160 -8.070 1 19 A 10 B 15 -1.507 A_DG10:DC15_B 10 -4.628 -0.300 -0.127 -0.351 0.718 1 19 A 11 B 14 -2.909 A_DG11:DC14_B 11 -5.965 0.108 0.312 -0.300 -1.686 1 20 A 12 B 13 1.480 A_DT12:DA13_B 12 -6.868 -0.275 -0.213 -0.190 1.085 1 20 C 25 D 48 1.551 C_DA25:DT48_D 13 -5.179 -0.017 0.116 -0.097 6.705 1 19 C 26 D 47 -1.294 C_DC26:DG47_D 14 -7.956 0.238 0.165 -0.067 13.832 1 19 C 27 D 46 3.324 C_DC27:DG46_D 15 -9.279 0.303 -0.395 -0.076 10.681 1 19 C 28 D 45 4.090 C_DG28:DC45_D 16 -11.521 -0.394 -0.628 -0.187 12.072 1 20 C 29 D 44 4.856 C_DA29:DT44_D 17 -15.548 0.311 0.273 -0.014 3.465 1 20 C 30 D 43 -2.762 C_DA30:DT43_D 18 -15.571 0.415 0.425 -0.205 -2.321 1 20 C 31 D 42 -1.392 C_DT31:DA42_D 19 -16.506 -0.212 0.411 -0.236 -3.275 1 20 C 32 D 41 1.220 C_DT32:DA41_D 20 -19.599 0.108 -0.187 -0.313 -11.649 1 19 C 33 D 40 -3.726 C_DC33:DG40_D 21 -17.543 0.152 0.308 -0.197 3.218 1 19 C 34 D 39 -2.812 C_DG34:DC39_D 22 -2.922 -0.046 0.252 -0.286 0.400 1 19 C 35 D 38 -4.869 C_DG35:DC38_D 23 -16.354 -0.056 0.479 -0.304 -3.160 1 20 C 36 D 37 -1.686 C_DT36:DA37_D 24 -5.189 -0.016 0.027 -0.244 3.766 1 20 E 49 F 72 2.832 E_DA49:DT72_F 25 -3.213 -0.337 0.296 -0.292 -0.265 1 19 E 50 F 71 0.377 E_DC50:DG71_F 26 -3.687 0.248 0.292 -0.327 12.260 1 19 E 51 F 70 -5.120 E_DC51:DG70_F 27 -3.418 -0.226 -0.256 -0.305 15.351 1 19 E 52 F 69 7.574 E_DG52:DC69_F 28 -11.596 -0.186 0.233 0.205 8.481 1 20 E 53 F 68 2.302 E_DA53:DT68_F 29 -15.964 0.032 0.098 -0.193 -2.212 1 20 E 54 F 67 -0.824 E_DA54:DT67_F 30 -16.211 -0.192 0.041 -0.469 -0.146 1 20 E 55 F 66 -1.928 E_DT55:DA66_F 31 -16.588 -0.263 -0.053 -0.385 -12.220 1 20 E 56 F 65 -1.877 E_DT56:DA65_F 32 -17.777 -0.435 0.057 -0.418 -13.765 1 19 E 57 F 64 4.093 E_DC57:DG64_F 33 -7.152 -0.166 -0.215 0.067 7.400 1 19 E 58 F 63 -0.901 E_DG58:DC63_F 34 3.342 0.220 0.486 -0.315 6.323 1 19 E 59 F 62 -3.883 E_DG59:DC62_F 35 -9.742 0.166 0.389 -0.227 -8.783 1 20 E 60 F 61 -1.928 E_DT60:DA61_F 36 -6.075 0.152 0.303 -0.461 3.120 33.180 A A 1 2 -4.533 B B 24 23 3.106 -2.584 -0.366 -0.068 AA_DA1DC2:DG23DT24_BB 1 -2.355 4.131 33.001 0.294 0.264 3.368 34.590 A A 2 3 4.088 B B 23 22 3.256 2.424 0.854 0.677 AA_DC2DC3:DG22DG23_BB 2 3.892 -6.564 34.294 0.758 -0.826 3.311 35.200 A A 3 4 7.130 B B 22 21 3.215 4.297 -0.506 0.734 AA_DC3DG4:DC21DG22_BB 3 -3.070 5.095 34.814 0.572 0.379 3.363 38.916 A A 4 5 0.049 B B 21 20 3.365 0.033 0.014 -0.372 AA_DG4DA5:DT20DC21_BB 4 1.339 -2.010 38.894 -0.563 0.146 3.348 36.184 A A 5 6 -0.038 B B 20 19 3.351 -0.023 0.008 -0.823 AA_DA5DA6:DT19DT20_BB 5 -1.660 2.674 36.147 -1.321 -0.253 3.326 28.872 A A 6 7 -1.118 B B 19 18 3.279 -0.557 -0.488 -1.029 AA_DA6DT7:DA18DT19_BB 6 -2.246 4.509 28.781 -1.939 0.475 3.406 38.853 A A 7 8 0.990 B B 18 17 3.415 0.659 -0.171 -0.414 AA_DT7DT8:DA17DA18_BB 7 0.483 -0.726 38.844 -0.706 0.319 3.312 42.452 A A 8 9 -2.770 B B 17 16 3.348 -2.003 0.086 0.405 AA_DT8DC9:DG16DA17_BB 8 -3.045 4.210 42.303 0.767 -0.434 3.141 25.997 A A 9 10 1.522 B B 16 15 3.165 0.682 -0.057 0.712 AA_DC9DG10:DC15DG16_BB 9 3.775 -8.421 25.717 1.400 1.134 3.183 37.556 A A 10 11 2.377 B B 15 14 3.032 1.521 -1.011 0.429 AA_DG10DG11:DC14DC15_BB 10 -7.368 11.517 36.821 0.476 0.648 3.479 32.937 A A 11 12 -4.149 B B 14 13 3.411 -2.336 0.652 -0.220 AA_DG11DT12:DA13DC14_BB 11 6.491 -11.529 32.227 0.036 0.028 3.226 28.900 C C 25 26 -0.460 D D 48 47 3.231 -0.229 -0.041 -0.575 CC_DA25DC26:DG47DT48_DD 12 -2.576 5.167 28.786 -1.101 -0.484 3.076 33.453 C C 26 27 5.456 D D 47 46 3.137 3.118 0.062 -0.067 CC_DC26DC27:DG46DG47_DD 13 6.319 -11.056 32.723 -0.611 0.895 3.391 33.151 C C 27 28 16.001 D D 46 45 3.447 9.019 -0.767 0.358 CC_DC27DG28:DC45DG46_DD 14 1.170 -2.075 31.913 -0.989 1.554 3.101 42.128 C C 28 29 2.506 D D 45 44 3.165 1.796 0.363 0.154 CC_DG28DA29:DT44DC45_DD 15 -5.402 7.536 41.759 0.036 -1.041 3.390 34.944 C C 29 30 1.075 D D 44 43 3.399 0.644 -0.273 -0.747 CC_DA29DA30:DT43DT44_DD 16 -4.896 8.179 34.604 -1.346 -0.317 3.395 31.239 C C 30 31 -13.312 D D 43 42 3.289 -7.108 -0.010 -0.852 CC_DA30DT31:DA42DT43_DD 17 0.757 -1.419 30.430 -0.186 0.168 3.117 39.952 C C 31 32 1.315 D D 42 41 3.167 0.895 -0.042 -0.284 CC_DT31DT32:DA41DA42_DD 18 6.274 -9.218 39.466 -0.515 0.758 3.436 39.904 C C 32 33 2.858 D D 41 40 3.470 1.948 0.406 0.118 CC_DT32DC33:DG40DA41_DD 19 -2.874 4.216 39.759 -0.065 -0.946 3.033 29.720 C C 33 34 13.007 D D 40 39 2.951 6.616 -0.551 0.624 CC_DC33DG34:DC39DG40_DD 20 -1.076 2.115 28.970 -0.070 0.865 3.402 36.436 C C 34 35 -1.181 D D 39 38 3.367 -0.737 -0.525 0.114 CC_DG34DG35:DC38DC39_DD 21 -4.131 6.621 36.201 0.288 0.244 3.396 41.054 C C 35 36 -12.672 D D 38 37 3.339 -8.806 1.071 -0.163 CC_DG35DT36:DA37DC38_DD 22 4.618 -6.645 39.882 0.770 -1.001 3.588 31.969 E E 49 50 -5.905 F F 72 71 3.585 -3.245 -0.092 -0.216 EE_DA49DC50:DG71DT72_FF 23 -1.992 3.625 31.748 0.254 -0.229 2.793 29.728 E E 50 51 12.989 F F 71 70 2.921 6.552 0.187 -0.111 EE_DC50DC51:DG70DG71_FF 24 6.901 -13.682 28.197 -1.450 0.934 3.322 35.742 E E 51 52 4.729 F F 70 69 3.268 2.897 -0.214 0.735 EE_DC51DG52:DC69DG70_FF 25 -2.877 4.697 35.516 0.775 -0.072 3.327 40.072 E E 52 53 0.117 F F 69 68 3.324 0.080 -0.163 0.047 EE_DG52DA53:DT68DC69_FF 26 -1.034 1.510 40.059 0.059 0.118 3.396 37.935 E E 53 54 -2.530 F F 68 67 3.383 -1.644 -0.168 -0.335 EE_DA53DA54:DT67DT68_FF 27 -0.742 1.142 37.894 -0.297 0.161 3.148 29.625 E E 54 55 1.254 F F 67 66 3.172 0.641 -0.097 -0.970 EE_DA54DT55:DA66DT67_FF 28 0.649 -1.270 29.612 -2.028 0.322 3.539 37.370 E E 55 56 0.879 F F 66 65 3.543 0.563 -0.025 -0.246 EE_DT55DT56:DA65DA66_FF 29 0.319 -0.499 37.365 -0.465 0.085 3.272 41.386 E E 56 57 1.216 F F 65 64 3.221 0.858 0.578 0.764 EE_DT56DC57:DG64DA65_FF 30 3.596 -5.094 41.228 0.990 -0.435 2.939 34.448 E E 57 58 3.082 F F 64 63 2.965 1.819 0.382 1.044 EE_DC57DG58:DC63DG64_FF 31 -4.641 7.863 34.096 1.507 -1.300 3.661 35.821 E E 58 59 3.036 F F 63 62 3.589 1.866 -0.925 0.783 EE_DG58DG59:DC62DC63_FF 32 -1.635 2.660 35.738 0.976 1.243 3.788 36.786 E E 59 60 -11.113 F F 62 61 3.754 -6.968 0.869 -0.264 EE_DG59DT60:DA61DC62_FF 33 2.546 -4.061 36.055 0.687 -0.974 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Data collection Database references Refinement description 1 0 2002-05-08 1 1 2008-04-27 1 2 2011-07-13 1 3 2024-02-07 1 4 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession RCSB Y RCSB 2001-05-08 REL REL HOH water standard B-DNA fiber coordinates Other experimental model HOH 73 2 HOH HOH 73 A HOH 79 2 HOH HOH 79 A HOH 82 2 HOH HOH 82 A HOH 86 2 HOH HOH 86 A HOH 87 2 HOH HOH 87 A HOH 89 2 HOH HOH 89 A HOH 90 2 HOH HOH 90 A HOH 99 2 HOH HOH 99 A HOH 116 2 HOH HOH 116 A HOH 117 2 HOH HOH 117 A HOH 121 2 HOH HOH 121 A HOH 133 2 HOH HOH 133 A HOH 134 2 HOH HOH 134 A HOH 151 2 HOH HOH 151 A HOH 156 2 HOH HOH 156 A HOH 173 2 HOH HOH 173 A HOH 174 2 HOH HOH 174 A HOH 175 2 HOH HOH 175 A HOH 176 2 HOH HOH 176 A HOH 182 2 HOH HOH 182 A HOH 183 2 HOH HOH 183 A HOH 74 2 HOH HOH 74 B HOH 75 2 HOH HOH 75 B HOH 76 2 HOH HOH 76 B HOH 77 2 HOH HOH 77 B HOH 78 2 HOH HOH 78 B HOH 80 2 HOH HOH 80 B HOH 81 2 HOH HOH 81 B HOH 83 2 HOH HOH 83 B HOH 84 2 HOH HOH 84 B HOH 85 2 HOH HOH 85 B HOH 88 2 HOH HOH 88 B HOH 113 2 HOH HOH 113 B HOH 118 2 HOH HOH 118 B HOH 119 2 HOH HOH 119 B HOH 120 2 HOH HOH 120 B HOH 123 2 HOH HOH 123 B HOH 124 2 HOH HOH 124 B HOH 139 2 HOH HOH 139 B HOH 142 2 HOH HOH 142 B HOH 152 2 HOH HOH 152 B HOH 157 2 HOH HOH 157 B HOH 181 2 HOH HOH 181 B HOH 184 2 HOH HOH 184 B HOH 185 2 HOH HOH 185 B HOH 91 2 HOH HOH 91 C HOH 92 2 HOH HOH 92 C HOH 93 2 HOH HOH 93 C HOH 94 2 HOH HOH 94 C HOH 95 2 HOH HOH 95 C HOH 97 2 HOH HOH 97 C HOH 107 2 HOH HOH 107 C HOH 108 2 HOH HOH 108 C HOH 109 2 HOH HOH 109 C HOH 112 2 HOH HOH 112 C HOH 114 2 HOH HOH 114 C HOH 115 2 HOH HOH 115 C HOH 125 2 HOH HOH 125 C HOH 130 2 HOH HOH 130 C HOH 131 2 HOH HOH 131 C HOH 146 2 HOH HOH 146 C HOH 150 2 HOH HOH 150 C HOH 159 2 HOH HOH 159 C HOH 172 2 HOH HOH 172 C HOH 177 2 HOH HOH 177 C HOH 178 2 HOH HOH 178 C HOH 180 2 HOH HOH 180 C HOH 96 2 HOH HOH 96 D HOH 98 2 HOH HOH 98 D HOH 122 2 HOH HOH 122 D HOH 126 2 HOH HOH 126 D HOH 140 2 HOH HOH 140 D HOH 141 2 HOH HOH 141 D HOH 145 2 HOH HOH 145 D HOH 153 2 HOH HOH 153 D HOH 158 2 HOH HOH 158 D HOH 162 2 HOH HOH 162 D HOH 163 2 HOH HOH 163 D HOH 164 2 HOH HOH 164 D HOH 168 2 HOH HOH 168 D HOH 170 2 HOH HOH 170 D HOH 179 2 HOH HOH 179 D HOH 102 2 HOH HOH 102 E HOH 103 2 HOH HOH 103 E HOH 127 2 HOH HOH 127 E HOH 128 2 HOH HOH 128 E HOH 135 2 HOH HOH 135 E HOH 138 2 HOH HOH 138 E HOH 143 2 HOH HOH 143 E HOH 149 2 HOH HOH 149 E HOH 155 2 HOH HOH 155 E HOH 161 2 HOH HOH 161 E HOH 171 2 HOH HOH 171 E HOH 186 2 HOH HOH 186 E HOH 100 2 HOH HOH 100 F HOH 101 2 HOH HOH 101 F HOH 104 2 HOH HOH 104 F HOH 105 2 HOH HOH 105 F HOH 106 2 HOH HOH 106 F HOH 110 2 HOH HOH 110 F HOH 111 2 HOH HOH 111 F HOH 129 2 HOH HOH 129 F HOH 132 2 HOH HOH 132 F HOH 136 2 HOH HOH 136 F HOH 137 2 HOH HOH 137 F HOH 144 2 HOH HOH 144 F HOH 147 2 HOH HOH 147 F HOH 148 2 HOH HOH 148 F HOH 154 2 HOH HOH 154 F HOH 160 2 HOH HOH 160 F HOH 165 2 HOH HOH 165 F HOH 166 2 HOH HOH 166 F HOH 167 2 HOH HOH 167 F HOH 169 2 HOH HOH 169 F A 1 n 1 DA 1 A C 2 n 2 DC 2 A C 3 n 3 DC 3 A G 4 n 4 DG 4 A A 5 n 5 DA 5 A A 6 n 6 DA 6 A T 7 n 7 DT 7 A T 8 n 8 DT 8 A C 9 n 9 DC 9 A G 10 n 10 DG 10 A G 11 n 11 DG 11 A T 12 n 12 DT 12 A A 13 n 1 DA 13 B C 14 n 2 DC 14 B C 15 n 3 DC 15 B G 16 n 4 DG 16 B A 17 n 5 DA 17 B A 18 n 6 DA 18 B T 19 n 7 DT 19 B T 20 n 8 DT 20 B C 21 n 9 DC 21 B G 22 n 10 DG 22 B G 23 n 11 DG 23 B T 24 n 12 DT 24 B A 25 n 1 DA 25 C C 26 n 2 DC 26 C C 27 n 3 DC 27 C G 28 n 4 DG 28 C A 29 n 5 DA 29 C A 30 n 6 DA 30 C T 31 n 7 DT 31 C T 32 n 8 DT 32 C C 33 n 9 DC 33 C G 34 n 10 DG 34 C G 35 n 11 DG 35 C T 36 n 12 DT 36 C A 37 n 1 DA 37 D C 38 n 2 DC 38 D C 39 n 3 DC 39 D G 40 n 4 DG 40 D A 41 n 5 DA 41 D A 42 n 6 DA 42 D T 43 n 7 DT 43 D T 44 n 8 DT 44 D C 45 n 9 DC 45 D G 46 n 10 DG 46 D G 47 n 11 DG 47 D T 48 n 12 DT 48 D A 49 n 1 DA 49 E C 50 n 2 DC 50 E C 51 n 3 DC 51 E G 52 n 4 DG 52 E A 53 n 5 DA 53 E A 54 n 6 DA 54 E T 55 n 7 DT 55 E T 56 n 8 DT 56 E C 57 n 9 DC 57 E G 58 n 10 DG 58 E G 59 n 11 DG 59 E T 60 n 12 DT 60 E A 61 n 1 DA 61 F C 62 n 2 DC 62 F C 63 n 3 DC 63 F G 64 n 4 DG 64 F A 65 n 5 DA 65 F A 66 n 6 DA 66 F T 67 n 7 DT 67 F T 68 n 8 DT 68 F C 69 n 9 DC 69 F G 70 n 10 DG 70 F G 71 n 11 DG 71 F T 72 n 12 DT 72 F author_defined_assembly 2 dimeric author_defined_assembly 2 dimeric author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 E E OP2 O DG HOH 58 186 2.12 PARAM_NDBX.DNA TOP_NDBX.DNA 30.1 REFINEMENT STARTED WITH X-PLOR 3.1 USING B-DNA FIBER MODEL ALL DATA INCLUDED. REFINEMENT CONTINUED IN SHELXL-97 WITH THE OPTION HOPE FOR ANISOTROPIC SCALING TO CORRECT SIGNIFICANT ANISOTROPY IN THE DATA. THE CORRECTED OBSERVED STRUCTURE FACTORS WITH F<0 WERE EXCLUDED FROM REFINEMENT. REFINEMENT FURTHER CONTINUED WITH X-PLOR 3.1. 0.2920000 0.2220000 0.2240000 2.2 19.0 456 9810 8475 86.4 random 1 isotropic THROUGHOUT 0.0 0.0 MOLECULAR REPLACEMENT Fiber model of B-DNA Parkinson et al. 2.2 19.0 114 1572 0 1458 0 0.01 1.6 17.7 0.3700000 0.3300000 2.3 37 2.2 19.0 1ILC 9810 9810 0 0 0.0510000 0.0510000 1 25.8 3.7 95.7 0.6540000 2.2 2.24 2.0 491 0.6540000 3.6 95.0 model building MFT model building ULTIMA refinement X-PLOR 3.1 data reduction DENZO data scaling SCALEPACK phasing MFT phasing ULTIMA DNA Bending by an Adenine-Thymine Tract and Its Role in Gene Regulation. 1 N N 1 N N 1 N N 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 2 N N hydrog WATSON-CRICK A DA 1 A N1 DA 1 1_555 B DT 24 B N3 DT 12 1_555 hydrog WATSON-CRICK A DA 1 A N6 DA 1 1_555 B DT 24 B O4 DT 12 1_555 hydrog WATSON-CRICK A DC 2 A N3 DC 2 1_555 B DG 23 B N1 DG 11 1_555 hydrog WATSON-CRICK A DC 2 A N4 DC 2 1_555 B DG 23 B O6 DG 11 1_555 hydrog WATSON-CRICK A DC 2 A O2 DC 2 1_555 B DG 23 B N2 DG 11 1_555 hydrog WATSON-CRICK A DC 3 A N3 DC 3 1_555 B DG 22 B N1 DG 10 1_555 hydrog WATSON-CRICK A DC 3 A N4 DC 3 1_555 B DG 22 B O6 DG 10 1_555 hydrog WATSON-CRICK A DC 3 A O2 DC 3 1_555 B DG 22 B N2 DG 10 1_555 hydrog WATSON-CRICK A DG 4 A N1 DG 4 1_555 B DC 21 B N3 DC 9 1_555 hydrog WATSON-CRICK A DG 4 A N2 DG 4 1_555 B DC 21 B O2 DC 9 1_555 hydrog WATSON-CRICK A DG 4 A O6 DG 4 1_555 B DC 21 B N4 DC 9 1_555 hydrog WATSON-CRICK A DA 5 A N1 DA 5 1_555 B DT 20 B N3 DT 8 1_555 hydrog WATSON-CRICK A DA 5 A N6 DA 5 1_555 B DT 20 B O4 DT 8 1_555 hydrog WATSON-CRICK A DA 6 A N1 DA 6 1_555 B DT 19 B N3 DT 7 1_555 hydrog WATSON-CRICK A DA 6 A N6 DA 6 1_555 B DT 19 B O4 DT 7 1_555 hydrog WATSON-CRICK A DT 7 A N3 DT 7 1_555 B DA 18 B N1 DA 6 1_555 hydrog WATSON-CRICK A DT 7 A O4 DT 7 1_555 B DA 18 B N6 DA 6 1_555 hydrog WATSON-CRICK A DT 8 A N3 DT 8 1_555 B DA 17 B N1 DA 5 1_555 hydrog WATSON-CRICK A DT 8 A O4 DT 8 1_555 B DA 17 B N6 DA 5 1_555 hydrog WATSON-CRICK A DC 9 A N3 DC 9 1_555 B DG 16 B N1 DG 4 1_555 hydrog WATSON-CRICK A DC 9 A N4 DC 9 1_555 B DG 16 B O6 DG 4 1_555 hydrog WATSON-CRICK A DC 9 A O2 DC 9 1_555 B DG 16 B N2 DG 4 1_555 hydrog WATSON-CRICK A DG 10 A N1 DG 10 1_555 B DC 15 B N3 DC 3 1_555 hydrog WATSON-CRICK A DG 10 A N2 DG 10 1_555 B DC 15 B O2 DC 3 1_555 hydrog WATSON-CRICK A DG 10 A O6 DG 10 1_555 B DC 15 B N4 DC 3 1_555 hydrog WATSON-CRICK A DG 11 A N1 DG 11 1_555 B DC 14 B N3 DC 2 1_555 hydrog WATSON-CRICK A DG 11 A N2 DG 11 1_555 B DC 14 B O2 DC 2 1_555 hydrog WATSON-CRICK A DG 11 A O6 DG 11 1_555 B DC 14 B N4 DC 2 1_555 hydrog WATSON-CRICK A DT 12 A N3 DT 12 1_555 B DA 13 B N1 DA 1 1_555 hydrog WATSON-CRICK A DT 12 A O4 DT 12 1_555 B DA 13 B N6 DA 1 1_555 hydrog WATSON-CRICK C DA 25 C N1 DA 1 1_555 D DT 48 D N3 DT 12 1_555 hydrog WATSON-CRICK C DA 25 C N6 DA 1 1_555 D DT 48 D O4 DT 12 1_555 hydrog WATSON-CRICK C DC 26 C N3 DC 2 1_555 D DG 47 D N1 DG 11 1_555 hydrog WATSON-CRICK C DC 26 C N4 DC 2 1_555 D DG 47 D O6 DG 11 1_555 hydrog WATSON-CRICK C DC 26 C O2 DC 2 1_555 D DG 47 D N2 DG 11 1_555 hydrog WATSON-CRICK C DC 27 C N3 DC 3 1_555 D DG 46 D N1 DG 10 1_555 hydrog WATSON-CRICK C DC 27 C N4 DC 3 1_555 D DG 46 D O6 DG 10 1_555 hydrog WATSON-CRICK C DC 27 C O2 DC 3 1_555 D DG 46 D N2 DG 10 1_555 hydrog WATSON-CRICK C DG 28 C N1 DG 4 1_555 D DC 45 D N3 DC 9 1_555 hydrog WATSON-CRICK C DG 28 C N2 DG 4 1_555 D DC 45 D O2 DC 9 1_555 hydrog WATSON-CRICK C DG 28 C O6 DG 4 1_555 D DC 45 D N4 DC 9 1_555 hydrog WATSON-CRICK C DA 29 C N1 DA 5 1_555 D DT 44 D N3 DT 8 1_555 hydrog WATSON-CRICK C DA 29 C N6 DA 5 1_555 D DT 44 D O4 DT 8 1_555 hydrog WATSON-CRICK C DA 30 C N1 DA 6 1_555 D DT 43 D N3 DT 7 1_555 hydrog WATSON-CRICK C DA 30 C N6 DA 6 1_555 D DT 43 D O4 DT 7 1_555 hydrog WATSON-CRICK C DT 31 C N3 DT 7 1_555 D DA 42 D N1 DA 6 1_555 hydrog WATSON-CRICK C DT 31 C O4 DT 7 1_555 D DA 42 D N6 DA 6 1_555 hydrog WATSON-CRICK C DT 32 C N3 DT 8 1_555 D DA 41 D N1 DA 5 1_555 hydrog WATSON-CRICK C DT 32 C O4 DT 8 1_555 D DA 41 D N6 DA 5 1_555 hydrog WATSON-CRICK C DC 33 C N3 DC 9 1_555 D DG 40 D N1 DG 4 1_555 hydrog WATSON-CRICK C DC 33 C N4 DC 9 1_555 D DG 40 D O6 DG 4 1_555 hydrog WATSON-CRICK C DC 33 C O2 DC 9 1_555 D DG 40 D N2 DG 4 1_555 hydrog WATSON-CRICK C DG 34 C N1 DG 10 1_555 D DC 39 D N3 DC 3 1_555 hydrog WATSON-CRICK C DG 34 C N2 DG 10 1_555 D DC 39 D O2 DC 3 1_555 hydrog WATSON-CRICK C DG 34 C O6 DG 10 1_555 D DC 39 D N4 DC 3 1_555 hydrog WATSON-CRICK C DG 35 C N1 DG 11 1_555 D DC 38 D N3 DC 2 1_555 hydrog WATSON-CRICK C DG 35 C N2 DG 11 1_555 D DC 38 D O2 DC 2 1_555 hydrog WATSON-CRICK C DG 35 C O6 DG 11 1_555 D DC 38 D N4 DC 2 1_555 hydrog WATSON-CRICK C DT 36 C N3 DT 12 1_555 D DA 37 D N1 DA 1 1_555 hydrog WATSON-CRICK C DT 36 C O4 DT 12 1_555 D DA 37 D N6 DA 1 1_555 hydrog WATSON-CRICK E DA 49 E N1 DA 1 1_555 F DT 72 F N3 DT 12 1_555 hydrog WATSON-CRICK E DA 49 E N6 DA 1 1_555 F DT 72 F O4 DT 12 1_555 hydrog WATSON-CRICK E DC 50 E N3 DC 2 1_555 F DG 71 F N1 DG 11 1_555 hydrog WATSON-CRICK E DC 50 E N4 DC 2 1_555 F DG 71 F O6 DG 11 1_555 hydrog WATSON-CRICK E DC 50 E O2 DC 2 1_555 F DG 71 F N2 DG 11 1_555 hydrog WATSON-CRICK E DC 51 E N3 DC 3 1_555 F DG 70 F N1 DG 10 1_555 hydrog WATSON-CRICK E DC 51 E N4 DC 3 1_555 F DG 70 F O6 DG 10 1_555 hydrog WATSON-CRICK E DC 51 E O2 DC 3 1_555 F DG 70 F N2 DG 10 1_555 hydrog WATSON-CRICK E DG 52 E N1 DG 4 1_555 F DC 69 F N3 DC 9 1_555 hydrog WATSON-CRICK E DG 52 E N2 DG 4 1_555 F DC 69 F O2 DC 9 1_555 hydrog WATSON-CRICK E DG 52 E O6 DG 4 1_555 F DC 69 F N4 DC 9 1_555 hydrog WATSON-CRICK E DA 53 E N1 DA 5 1_555 F DT 68 F N3 DT 8 1_555 hydrog WATSON-CRICK E DA 53 E N6 DA 5 1_555 F DT 68 F O4 DT 8 1_555 hydrog WATSON-CRICK E DA 54 E N1 DA 6 1_555 F DT 67 F N3 DT 7 1_555 hydrog WATSON-CRICK E DA 54 E N6 DA 6 1_555 F DT 67 F O4 DT 7 1_555 hydrog WATSON-CRICK E DT 55 E N3 DT 7 1_555 F DA 66 F N1 DA 6 1_555 hydrog WATSON-CRICK E DT 55 E O4 DT 7 1_555 F DA 66 F N6 DA 6 1_555 hydrog WATSON-CRICK E DT 56 E N3 DT 8 1_555 F DA 65 F N1 DA 5 1_555 hydrog WATSON-CRICK E DT 56 E O4 DT 8 1_555 F DA 65 F N6 DA 5 1_555 hydrog WATSON-CRICK E DC 57 E N3 DC 9 1_555 F DG 64 F N1 DG 4 1_555 hydrog WATSON-CRICK E DC 57 E N4 DC 9 1_555 F DG 64 F O6 DG 4 1_555 hydrog WATSON-CRICK E DC 57 E O2 DC 9 1_555 F DG 64 F N2 DG 4 1_555 hydrog WATSON-CRICK E DG 58 E N1 DG 10 1_555 F DC 63 F N3 DC 3 1_555 hydrog WATSON-CRICK E DG 58 E N2 DG 10 1_555 F DC 63 F O2 DC 3 1_555 hydrog WATSON-CRICK E DG 58 E O6 DG 10 1_555 F DC 63 F N4 DC 3 1_555 hydrog WATSON-CRICK E DG 59 E N1 DG 11 1_555 F DC 62 F N3 DC 2 1_555 hydrog WATSON-CRICK E DG 59 E N2 DG 11 1_555 F DC 62 F O2 DC 2 1_555 hydrog WATSON-CRICK E DG 59 E O6 DG 11 1_555 F DC 62 F N4 DC 2 1_555 hydrog WATSON-CRICK E DT 60 E N3 DT 12 1_555 F DA 61 F N1 DA 1 1_555 hydrog WATSON-CRICK E DT 60 E O4 DT 12 1_555 F DA 61 F N6 DA 1 1_555 DNA B-DNA DOUBLE HELIX, DODECAMER DUPLEX, HPV E2 DNA TARGET, DNA 1ILC PDB 1 1ILC 1 12 1ILC 1 12 1ILC A 1 1 12 13 24 1ILC 13 24 1ILC B 1 1 12 25 36 1ILC 25 36 1ILC C 1 1 12 37 48 1ILC 37 48 1ILC D 1 1 12 49 60 1ILC 49 60 1ILC E 1 1 12 61 72 1ILC 61 72 1ILC F 1 1 12 1 P 1