data_1IMR # _entry.id 1IMR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1IMR pdb_00001imr 10.2210/pdb1imr/pdb RCSB DDF061 ? ? WWPDB D_1000174200 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-04-04 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1IMR _pdbx_database_status.recvd_initial_deposition_date 1995-10-23 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Berger, I.' 1 'Su, L.' 2 'Spitzner, J.R.' 3 'Kang, C.' 4 'Burke, T.G.' 5 'Rich, A.' 6 # _citation.id primary _citation.title 'Molecular structure of the halogenated anti-cancer drug iododoxorubicin complexed with d(TGTACA) and d(CGATCG).' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 23 _citation.page_first 4488 _citation.page_last 4494 _citation.year 1995 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7501474 _citation.pdbx_database_id_DOI 10.1093/nar/23.21.4488 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Berger, I.' 1 ? primary 'Su, L.' 2 ? primary 'Spitzner, J.R.' 3 ? primary 'Kang, C.' 4 ? primary 'Burke, T.G.' 5 ? primary 'Rich, A.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*GP*TP*AP*CP*A)-3') ; 1808.229 1 ? ? ? ? 2 non-polymer syn "4'-DEOXY-4'-IODODOXORUBICIN" 654.424 1 ? ? ? ? 3 water nat water 18.015 49 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DT)(DG)(DT)(DA)(DC)(DA)' _entity_poly.pdbx_seq_one_letter_code_can TGTACA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "4'-DEOXY-4'-IODODOXORUBICIN" DM7 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DC n 1 6 DA n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DM7 non-polymer . "4'-DEOXY-4'-IODODOXORUBICIN" "4'-DEOXY-4'-IODOADRIAMYCIN" 'C27 H29 I N O10 1' 654.424 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DA 4 4 4 DA A A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DA 6 6 6 DA A A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DM7 1 7 7 DM7 DM7 A . C 3 HOH 1 8 8 HOH HOH A . C 3 HOH 2 9 9 HOH HOH A . C 3 HOH 3 10 10 HOH HOH A . C 3 HOH 4 11 11 HOH HOH A . C 3 HOH 5 12 12 HOH HOH A . C 3 HOH 6 13 13 HOH HOH A . C 3 HOH 7 14 14 HOH HOH A . C 3 HOH 8 15 15 HOH HOH A . C 3 HOH 9 16 16 HOH HOH A . C 3 HOH 10 17 17 HOH HOH A . C 3 HOH 11 18 18 HOH HOH A . C 3 HOH 12 19 19 HOH HOH A . C 3 HOH 13 20 20 HOH HOH A . C 3 HOH 14 21 21 HOH HOH A . C 3 HOH 15 22 22 HOH HOH A . C 3 HOH 16 23 23 HOH HOH A . C 3 HOH 17 24 24 HOH HOH A . C 3 HOH 18 25 25 HOH HOH A . C 3 HOH 19 26 26 HOH HOH A . C 3 HOH 20 27 27 HOH HOH A . C 3 HOH 21 28 28 HOH HOH A . C 3 HOH 22 29 29 HOH HOH A . C 3 HOH 23 30 30 HOH HOH A . C 3 HOH 24 31 31 HOH HOH A . C 3 HOH 25 32 32 HOH HOH A . C 3 HOH 26 33 33 HOH HOH A . C 3 HOH 27 34 34 HOH HOH A . C 3 HOH 28 35 35 HOH HOH A . C 3 HOH 29 36 36 HOH HOH A . C 3 HOH 30 37 37 HOH HOH A . C 3 HOH 31 38 38 HOH HOH A . C 3 HOH 32 39 39 HOH HOH A . C 3 HOH 33 40 40 HOH HOH A . C 3 HOH 34 41 41 HOH HOH A . C 3 HOH 35 42 42 HOH HOH A . C 3 HOH 36 43 43 HOH HOH A . C 3 HOH 37 44 44 HOH HOH A . C 3 HOH 38 45 45 HOH HOH A . C 3 HOH 39 46 46 HOH HOH A . C 3 HOH 40 47 47 HOH HOH A . C 3 HOH 41 48 48 HOH HOH A . C 3 HOH 42 49 49 HOH HOH A . C 3 HOH 43 50 50 HOH HOH A . C 3 HOH 44 51 51 HOH HOH A . C 3 HOH 45 52 52 HOH HOH A . C 3 HOH 46 53 53 HOH HOH A . C 3 HOH 47 54 54 HOH HOH A . C 3 HOH 48 55 55 HOH HOH A . C 3 HOH 49 56 56 HOH HOH A . # _software.name X-PLOR _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1IMR _cell.length_a 27.960 _cell.length_b 27.960 _cell.length_c 52.570 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IMR _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # _exptl.entry_id 1IMR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.84 _exptl_crystal.density_percent_sol 56.71 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.50 _exptl_crystal_grow.pdbx_details 'pH 6.50, VAPOR DIFFUSION, HANGING DROP, temperature 277.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 MGCL2 ? ? ? 1 4 1 SPERMINE ? ? ? 1 5 1 KCL ? ? ? 1 6 1 'K CACODYLATE' ? ? ? 1 7 2 WATER ? ? ? 1 8 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 277.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _refine.entry_id 1IMR _refine.ls_number_reflns_obs 2521 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.000 _refine.ls_d_res_high 1.600 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1760000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1760000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 133 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 49 _refine_hist.number_atoms_total 221 _refine_hist.d_res_high 1.600 _refine_hist.d_res_low 10.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.016 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1IMR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1IMR _struct.title 'MOLECULAR STRUCTURE OF THE HALOGENATED ANTI-CANCER DRUG IODODOXORUBICIN COMPLEXED WITH D(TGTACA) AND D(CGATCG)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1IMR _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1IMR _struct_ref.pdbx_db_accession 1IMR _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1IMR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 6 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1IMR _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 6 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0.0000000000 -1.0000000000 0.0000000000 27.9600000000 -1.0000000000 0.0000000000 0.0000000000 27.9600000000 0.0000000000 0.0000000000 -1.0000000000 26.2850000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 A DA 6 N1 ? ? A DT 1 A DA 6 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 A DA 6 N6 ? ? A DT 1 A DA 6 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 5 N3 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 5 O2 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 5 N4 ? ? A DG 2 A DC 5 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 3 N3 ? ? ? 1_555 A DA 4 N1 ? ? A DT 3 A DA 4 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 O4 ? ? ? 1_555 A DA 4 N6 ? ? A DT 3 A DA 4 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 3 N3 ? ? A DA 4 A DT 3 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 3 O4 ? ? A DA 4 A DT 3 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 2 N1 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 2 O6 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 2 N2 ? ? A DC 5 A DG 2 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N1 ? ? ? 1_555 A DT 1 N3 ? ? A DA 6 A DT 1 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DT 1 O4 ? ? A DA 6 A DT 1 8_665 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DM7 7 ? 12 'BINDING SITE FOR RESIDUE DM7 A 7' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 DT A 1 ? DT A 1 . ? 8_665 ? 2 AC1 12 DG A 2 ? DG A 2 . ? 8_665 ? 3 AC1 12 DT A 3 ? DT A 3 . ? 8_665 ? 4 AC1 12 DA A 4 ? DA A 4 . ? 1_555 ? 5 AC1 12 DC A 5 ? DC A 5 . ? 1_555 ? 6 AC1 12 DA A 6 ? DA A 6 . ? 1_555 ? 7 AC1 12 HOH C . ? HOH A 8 . ? 1_555 ? 8 AC1 12 HOH C . ? HOH A 9 . ? 1_555 ? 9 AC1 12 HOH C . ? HOH A 23 . ? 1_555 ? 10 AC1 12 HOH C . ? HOH A 25 . ? 1_555 ? 11 AC1 12 HOH C . ? HOH A 28 . ? 1_555 ? 12 AC1 12 HOH C . ? HOH A 45 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C5 A DT 1 ? ? C7 A DT 1 ? ? 1.555 1.496 0.059 0.006 N 2 1 C5 A DT 3 ? ? C7 A DT 3 ? ? 1.550 1.496 0.054 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.13 108.30 3.83 0.30 N 2 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.25 108.30 3.95 0.30 N 3 1 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.22 122.90 -3.68 0.60 N 4 1 "C1'" A DC 5 ? ? "O4'" A DC 5 ? ? "C4'" A DC 5 ? ? 102.29 110.10 -7.81 1.00 N 5 1 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 123.27 118.90 4.37 0.60 N # _struct_site_keywords.site_id 1 _struct_site_keywords.text INTERCALATION # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DM7 C1 C Y N 108 DM7 C2 C Y N 109 DM7 C3 C Y N 110 DM7 C4 C Y N 111 DM7 C5 C N N 112 DM7 C6 C Y N 113 DM7 C7 C N S 114 DM7 C8 C N N 115 DM7 C9 C N S 116 DM7 C10 C N N 117 DM7 C11 C Y N 118 DM7 C12 C N N 119 DM7 C13 C N N 120 DM7 C14 C N N 121 DM7 C15 C Y N 122 DM7 C16 C Y N 123 DM7 C17 C Y N 124 DM7 C18 C Y N 125 DM7 C19 C Y N 126 DM7 C20 C Y N 127 DM7 C21 C N N 128 DM7 O4 O N N 129 DM7 O5 O N N 130 DM7 O6 O N N 131 DM7 O7 O N N 132 DM7 O9 O N N 133 DM7 O11 O N N 134 DM7 O12 O N N 135 DM7 O13 O N N 136 DM7 O14 O N N 137 DM7 "C1'" C N R 138 DM7 "C2'" C N N 139 DM7 "C3'" C N S 140 DM7 "C4'" C N S 141 DM7 "C5'" C N S 142 DM7 "C6'" C N N 143 DM7 "O5'" O N N 144 DM7 "N3'" N N N 145 DM7 "I4'" I N N 146 DM7 H1 H N N 147 DM7 H2 H N N 148 DM7 H3 H N N 149 DM7 H7 H N N 150 DM7 H81 H N N 151 DM7 H82 H N N 152 DM7 H101 H N N 153 DM7 H102 H N N 154 DM7 H141 H N N 155 DM7 H142 H N N 156 DM7 H211 H N N 157 DM7 H212 H N N 158 DM7 H213 H N N 159 DM7 HO6 H N N 160 DM7 HO9 H N N 161 DM7 HO11 H N N 162 DM7 HO14 H N N 163 DM7 "H1'" H N N 164 DM7 "H2'1" H N N 165 DM7 "H2'2" H N N 166 DM7 "H3'" H N N 167 DM7 "H4'" H N N 168 DM7 "H5'" H N N 169 DM7 "H6'1" H N N 170 DM7 "H6'2" H N N 171 DM7 "H6'3" H N N 172 DM7 "HN'1" H N N 173 DM7 "HN'2" H N N 174 DM7 "HN'3" H N N 175 DT OP3 O N N 176 DT P P N N 177 DT OP1 O N N 178 DT OP2 O N N 179 DT "O5'" O N N 180 DT "C5'" C N N 181 DT "C4'" C N R 182 DT "O4'" O N N 183 DT "C3'" C N S 184 DT "O3'" O N N 185 DT "C2'" C N N 186 DT "C1'" C N R 187 DT N1 N N N 188 DT C2 C N N 189 DT O2 O N N 190 DT N3 N N N 191 DT C4 C N N 192 DT O4 O N N 193 DT C5 C N N 194 DT C7 C N N 195 DT C6 C N N 196 DT HOP3 H N N 197 DT HOP2 H N N 198 DT "H5'" H N N 199 DT "H5''" H N N 200 DT "H4'" H N N 201 DT "H3'" H N N 202 DT "HO3'" H N N 203 DT "H2'" H N N 204 DT "H2''" H N N 205 DT "H1'" H N N 206 DT H3 H N N 207 DT H71 H N N 208 DT H72 H N N 209 DT H73 H N N 210 DT H6 H N N 211 HOH O O N N 212 HOH H1 H N N 213 HOH H2 H N N 214 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DM7 C1 C2 doub Y N 113 DM7 C1 C15 sing Y N 114 DM7 C1 H1 sing N N 115 DM7 C2 C3 sing Y N 116 DM7 C2 H2 sing N N 117 DM7 C3 C4 doub Y N 118 DM7 C3 H3 sing N N 119 DM7 C4 C16 sing Y N 120 DM7 C4 O4 sing N N 121 DM7 C5 C16 sing N N 122 DM7 C5 C17 sing N N 123 DM7 C5 O5 doub N N 124 DM7 C6 C17 doub Y N 125 DM7 C6 C19 sing Y N 126 DM7 C6 O6 sing N N 127 DM7 C7 C8 sing N N 128 DM7 C7 C19 sing N N 129 DM7 C7 O7 sing N N 130 DM7 C7 H7 sing N N 131 DM7 C8 C9 sing N N 132 DM7 C8 H81 sing N N 133 DM7 C8 H82 sing N N 134 DM7 C9 C10 sing N N 135 DM7 C9 C13 sing N N 136 DM7 C9 O9 sing N N 137 DM7 C10 C20 sing N N 138 DM7 C10 H101 sing N N 139 DM7 C10 H102 sing N N 140 DM7 C11 C18 doub Y N 141 DM7 C11 C20 sing Y N 142 DM7 C11 O11 sing N N 143 DM7 C12 C15 sing N N 144 DM7 C12 C18 sing N N 145 DM7 C12 O12 doub N N 146 DM7 C13 C14 sing N N 147 DM7 C13 O13 doub N N 148 DM7 C14 O14 sing N N 149 DM7 C14 H141 sing N N 150 DM7 C14 H142 sing N N 151 DM7 C15 C16 doub Y N 152 DM7 C17 C18 sing Y N 153 DM7 C19 C20 doub Y N 154 DM7 C21 O4 sing N N 155 DM7 C21 H211 sing N N 156 DM7 C21 H212 sing N N 157 DM7 C21 H213 sing N N 158 DM7 O6 HO6 sing N N 159 DM7 O7 "C1'" sing N N 160 DM7 O9 HO9 sing N N 161 DM7 O11 HO11 sing N N 162 DM7 O14 HO14 sing N N 163 DM7 "C1'" "C2'" sing N N 164 DM7 "C1'" "O5'" sing N N 165 DM7 "C1'" "H1'" sing N N 166 DM7 "C2'" "C3'" sing N N 167 DM7 "C2'" "H2'1" sing N N 168 DM7 "C2'" "H2'2" sing N N 169 DM7 "C3'" "C4'" sing N N 170 DM7 "C3'" "N3'" sing N N 171 DM7 "C3'" "H3'" sing N N 172 DM7 "C4'" "C5'" sing N N 173 DM7 "C4'" "I4'" sing N N 174 DM7 "C4'" "H4'" sing N N 175 DM7 "C5'" "C6'" sing N N 176 DM7 "C5'" "O5'" sing N N 177 DM7 "C5'" "H5'" sing N N 178 DM7 "C6'" "H6'1" sing N N 179 DM7 "C6'" "H6'2" sing N N 180 DM7 "C6'" "H6'3" sing N N 181 DM7 "N3'" "HN'1" sing N N 182 DM7 "N3'" "HN'2" sing N N 183 DM7 "N3'" "HN'3" sing N N 184 DT OP3 P sing N N 185 DT OP3 HOP3 sing N N 186 DT P OP1 doub N N 187 DT P OP2 sing N N 188 DT P "O5'" sing N N 189 DT OP2 HOP2 sing N N 190 DT "O5'" "C5'" sing N N 191 DT "C5'" "C4'" sing N N 192 DT "C5'" "H5'" sing N N 193 DT "C5'" "H5''" sing N N 194 DT "C4'" "O4'" sing N N 195 DT "C4'" "C3'" sing N N 196 DT "C4'" "H4'" sing N N 197 DT "O4'" "C1'" sing N N 198 DT "C3'" "O3'" sing N N 199 DT "C3'" "C2'" sing N N 200 DT "C3'" "H3'" sing N N 201 DT "O3'" "HO3'" sing N N 202 DT "C2'" "C1'" sing N N 203 DT "C2'" "H2'" sing N N 204 DT "C2'" "H2''" sing N N 205 DT "C1'" N1 sing N N 206 DT "C1'" "H1'" sing N N 207 DT N1 C2 sing N N 208 DT N1 C6 sing N N 209 DT C2 O2 doub N N 210 DT C2 N3 sing N N 211 DT N3 C4 sing N N 212 DT N3 H3 sing N N 213 DT C4 O4 doub N N 214 DT C4 C5 sing N N 215 DT C5 C7 sing N N 216 DT C5 C6 doub N N 217 DT C7 H71 sing N N 218 DT C7 H72 sing N N 219 DT C7 H73 sing N N 220 DT C6 H6 sing N N 221 HOH O H1 sing N N 222 HOH O H2 sing N N 223 # _ndb_struct_conf_na.entry_id 1IMR _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 A DA 6 8_665 -0.164 -0.115 0.198 7.714 0.863 -0.152 1 A_DT1:DA6_A A 1 ? A 6 ? 20 1 1 A DG 2 1_555 A DC 5 8_665 -0.025 -0.051 -0.351 -16.634 4.470 0.585 2 A_DG2:DC5_A A 2 ? A 5 ? 19 1 1 A DT 3 1_555 A DA 4 8_665 -0.039 -0.160 0.113 -1.397 -5.097 2.962 3 A_DT3:DA4_A A 3 ? A 4 ? 20 1 1 A DA 4 1_555 A DT 3 8_665 0.039 -0.160 0.113 1.397 -5.097 2.962 4 A_DA4:DT3_A A 4 ? A 3 ? 20 1 1 A DC 5 1_555 A DG 2 8_665 0.025 -0.051 -0.351 16.634 4.470 0.585 5 A_DC5:DG2_A A 5 ? A 2 ? 19 1 1 A DA 6 1_555 A DT 1 8_665 0.164 -0.115 0.198 -7.714 0.863 -0.152 6 A_DA6:DT1_A A 6 ? A 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 A DA 6 8_665 A DG 2 1_555 A DC 5 8_665 1.239 1.181 7.017 3.547 -5.083 36.979 3.264 -0.934 6.885 -7.945 -5.545 37.477 1 AA_DT1DG2:DC5DA6_AA A 1 ? A 6 ? A 2 ? A 5 ? 1 A DG 2 1_555 A DC 5 8_665 A DT 3 1_555 A DA 4 8_665 -1.119 0.089 3.034 -3.283 0.431 28.682 0.088 1.553 3.141 0.866 6.599 28.868 2 AA_DG2DT3:DA4DC5_AA A 2 ? A 5 ? A 3 ? A 4 ? 1 A DT 3 1_555 A DA 4 8_665 A DA 4 1_555 A DT 3 8_665 0.000 -0.086 3.372 0.000 4.423 37.936 -0.706 0.000 3.341 6.775 0.000 38.184 3 AA_DT3DA4:DT3DA4_AA A 3 ? A 4 ? A 4 ? A 3 ? 1 A DA 4 1_555 A DT 3 8_665 A DC 5 1_555 A DG 2 8_665 1.119 0.089 3.034 3.283 0.431 28.682 0.088 -1.553 3.141 0.866 -6.599 28.868 4 AA_DA4DC5:DG2DT3_AA A 4 ? A 3 ? A 5 ? A 2 ? 1 A DC 5 1_555 A DG 2 8_665 A DA 6 1_555 A DT 1 8_665 -1.239 1.181 7.017 -3.547 -5.083 36.979 3.264 0.934 6.885 -7.945 5.545 37.477 5 AA_DC5DA6:DT1DG2_AA A 5 ? A 2 ? A 6 ? A 1 ? # _atom_sites.entry_id 1IMR _atom_sites.fract_transf_matrix[1][1] 0.035765 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035765 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019022 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H I N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DT A 1 1 ? 9.342 20.191 22.609 1.00 12.71 ? 1 DT A "O5'" 1 ATOM 2 C "C5'" . DT A 1 1 ? 9.676 21.126 23.622 1.00 10.98 ? 1 DT A "C5'" 1 ATOM 3 C "C4'" . DT A 1 1 ? 11.144 21.027 24.103 1.00 11.36 ? 1 DT A "C4'" 1 ATOM 4 O "O4'" . DT A 1 1 ? 11.367 19.874 24.932 1.00 11.17 ? 1 DT A "O4'" 1 ATOM 5 C "C3'" . DT A 1 1 ? 12.113 20.910 22.869 1.00 12.78 ? 1 DT A "C3'" 1 ATOM 6 O "O3'" . DT A 1 1 ? 13.275 21.671 23.140 1.00 13.41 ? 1 DT A "O3'" 1 ATOM 7 C "C2'" . DT A 1 1 ? 12.498 19.418 22.921 1.00 10.63 ? 1 DT A "C2'" 1 ATOM 8 C "C1'" . DT A 1 1 ? 12.392 19.024 24.406 1.00 10.14 ? 1 DT A "C1'" 1 ATOM 9 N N1 . DT A 1 1 ? 12.021 17.596 24.476 1.00 9.76 ? 1 DT A N1 1 ATOM 10 C C2 . DT A 1 1 ? 13.046 16.638 24.547 1.00 8.62 ? 1 DT A C2 1 ATOM 11 O O2 . DT A 1 1 ? 14.258 16.885 24.574 1.00 8.23 ? 1 DT A O2 1 ATOM 12 N N3 . DT A 1 1 ? 12.599 15.331 24.592 1.00 8.68 ? 1 DT A N3 1 ATOM 13 C C4 . DT A 1 1 ? 11.291 14.890 24.575 1.00 6.43 ? 1 DT A C4 1 ATOM 14 O O4 . DT A 1 1 ? 11.031 13.686 24.615 1.00 7.33 ? 1 DT A O4 1 ATOM 15 C C5 . DT A 1 1 ? 10.315 15.944 24.504 1.00 6.83 ? 1 DT A C5 1 ATOM 16 C C7 . DT A 1 1 ? 8.806 15.569 24.482 1.00 8.28 ? 1 DT A C7 1 ATOM 17 C C6 . DT A 1 1 ? 10.690 17.228 24.458 1.00 8.63 ? 1 DT A C6 1 ATOM 18 H H3 . DT A 1 1 ? 13.314 14.624 24.649 1.00 10.00 ? 1 DT A H3 1 ATOM 19 H "HO5'" . DT A 1 1 ? 9.784 20.470 21.802 1.00 10.00 ? 1 DT A "HO5'" 1 ATOM 20 P P . DG A 1 2 ? 13.841 22.809 22.166 1.00 15.68 ? 2 DG A P 1 ATOM 21 O OP1 . DG A 1 2 ? 14.881 23.560 22.905 1.00 15.03 ? 2 DG A OP1 1 ATOM 22 O OP2 . DG A 1 2 ? 12.745 23.508 21.474 1.00 15.49 ? 2 DG A OP2 1 ATOM 23 O "O5'" . DG A 1 2 ? 14.556 21.916 21.096 1.00 14.66 ? 2 DG A "O5'" 1 ATOM 24 C "C5'" . DG A 1 2 ? 15.836 21.338 21.291 1.00 16.64 ? 2 DG A "C5'" 1 ATOM 25 C "C4'" . DG A 1 2 ? 16.168 20.470 20.077 1.00 15.04 ? 2 DG A "C4'" 1 ATOM 26 O "O4'" . DG A 1 2 ? 15.291 19.351 20.012 1.00 15.23 ? 2 DG A "O4'" 1 ATOM 27 C "C3'" . DG A 1 2 ? 15.956 21.293 18.758 1.00 17.10 ? 2 DG A "C3'" 1 ATOM 28 O "O3'" . DG A 1 2 ? 16.926 20.865 17.816 1.00 17.06 ? 2 DG A "O3'" 1 ATOM 29 C "C2'" . DG A 1 2 ? 14.601 20.764 18.306 1.00 15.70 ? 2 DG A "C2'" 1 ATOM 30 C "C1'" . DG A 1 2 ? 14.820 19.292 18.682 1.00 13.91 ? 2 DG A "C1'" 1 ATOM 31 N N9 . DG A 1 2 ? 13.588 18.491 18.561 1.00 12.37 ? 2 DG A N9 1 ATOM 32 C C8 . DG A 1 2 ? 12.260 18.853 18.548 1.00 11.49 ? 2 DG A C8 1 ATOM 33 N N7 . DG A 1 2 ? 11.466 17.834 18.377 1.00 12.24 ? 2 DG A N7 1 ATOM 34 C C5 . DG A 1 2 ? 12.319 16.737 18.273 1.00 9.56 ? 2 DG A C5 1 ATOM 35 C C6 . DG A 1 2 ? 12.037 15.362 18.076 1.00 8.52 ? 2 DG A C6 1 ATOM 36 O O6 . DG A 1 2 ? 10.945 14.815 17.947 1.00 10.11 ? 2 DG A O6 1 ATOM 37 N N1 . DG A 1 2 ? 13.184 14.585 18.031 1.00 5.19 ? 2 DG A N1 1 ATOM 38 C C2 . DG A 1 2 ? 14.468 15.065 18.162 1.00 7.51 ? 2 DG A C2 1 ATOM 39 N N2 . DG A 1 2 ? 15.438 14.163 18.095 1.00 5.45 ? 2 DG A N2 1 ATOM 40 N N3 . DG A 1 2 ? 14.746 16.364 18.345 1.00 8.27 ? 2 DG A N3 1 ATOM 41 C C4 . DG A 1 2 ? 13.624 17.134 18.388 1.00 10.61 ? 2 DG A C4 1 ATOM 42 H H1 . DG A 1 2 ? 13.034 13.594 17.903 1.00 10.00 ? 2 DG A H1 1 ATOM 43 H H21 . DG A 1 2 ? 16.413 14.401 18.207 1.00 10.00 ? 2 DG A H21 1 ATOM 44 H H22 . DG A 1 2 ? 15.167 13.206 17.924 1.00 10.00 ? 2 DG A H22 1 ATOM 45 P P . DT A 1 3 ? 17.722 21.891 16.899 1.00 17.09 ? 3 DT A P 1 ATOM 46 O OP1 . DT A 1 3 ? 18.371 22.870 17.793 1.00 17.49 ? 3 DT A OP1 1 ATOM 47 O OP2 . DT A 1 3 ? 16.833 22.341 15.808 1.00 17.03 ? 3 DT A OP2 1 ATOM 48 O "O5'" . DT A 1 3 ? 18.813 20.912 16.293 1.00 17.34 ? 3 DT A "O5'" 1 ATOM 49 C "C5'" . DT A 1 3 ? 19.727 20.267 17.146 1.00 14.19 ? 3 DT A "C5'" 1 ATOM 50 C "C4'" . DT A 1 3 ? 19.966 18.844 16.688 1.00 14.43 ? 3 DT A "C4'" 1 ATOM 51 O "O4'" . DT A 1 3 ? 18.742 18.074 16.783 1.00 13.17 ? 3 DT A "O4'" 1 ATOM 52 C "C3'" . DT A 1 3 ? 20.450 18.842 15.197 1.00 14.48 ? 3 DT A "C3'" 1 ATOM 53 O "O3'" . DT A 1 3 ? 21.608 18.002 15.176 1.00 13.67 ? 3 DT A "O3'" 1 ATOM 54 C "C2'" . DT A 1 3 ? 19.216 18.210 14.485 1.00 14.07 ? 3 DT A "C2'" 1 ATOM 55 C "C1'" . DT A 1 3 ? 18.548 17.335 15.572 1.00 11.21 ? 3 DT A "C1'" 1 ATOM 56 N N1 . DT A 1 3 ? 17.101 17.169 15.351 1.00 10.61 ? 3 DT A N1 1 ATOM 57 C C2 . DT A 1 3 ? 16.621 15.874 15.232 1.00 9.60 ? 3 DT A C2 1 ATOM 58 O O2 . DT A 1 3 ? 17.338 14.873 15.297 1.00 7.65 ? 3 DT A O2 1 ATOM 59 N N3 . DT A 1 3 ? 15.257 15.764 15.030 1.00 8.16 ? 3 DT A N3 1 ATOM 60 C C4 . DT A 1 3 ? 14.361 16.799 14.939 1.00 8.57 ? 3 DT A C4 1 ATOM 61 O O4 . DT A 1 3 ? 13.180 16.555 14.770 1.00 10.47 ? 3 DT A O4 1 ATOM 62 C C5 . DT A 1 3 ? 14.940 18.100 15.067 1.00 9.04 ? 3 DT A C5 1 ATOM 63 C C7 . DT A 1 3 ? 14.047 19.362 14.957 1.00 9.37 ? 3 DT A C7 1 ATOM 64 C C6 . DT A 1 3 ? 16.258 18.246 15.266 1.00 10.26 ? 3 DT A C6 1 ATOM 65 H H3 . DT A 1 3 ? 14.900 14.822 14.936 1.00 10.00 ? 3 DT A H3 1 ATOM 66 P P . DA A 1 4 ? 22.502 17.786 13.876 1.00 12.88 ? 4 DA A P 1 ATOM 67 O OP1 . DA A 1 4 ? 23.892 17.622 14.337 1.00 13.84 ? 4 DA A OP1 1 ATOM 68 O OP2 . DA A 1 4 ? 22.135 18.786 12.856 1.00 13.34 ? 4 DA A OP2 1 ATOM 69 O "O5'" . DA A 1 4 ? 21.996 16.378 13.297 1.00 13.38 ? 4 DA A "O5'" 1 ATOM 70 C "C5'" . DA A 1 4 ? 22.228 15.163 13.978 1.00 13.14 ? 4 DA A "C5'" 1 ATOM 71 C "C4'" . DA A 1 4 ? 21.676 13.969 13.180 1.00 13.05 ? 4 DA A "C4'" 1 ATOM 72 O "O4'" . DA A 1 4 ? 20.254 14.007 13.100 1.00 12.24 ? 4 DA A "O4'" 1 ATOM 73 C "C3'" . DA A 1 4 ? 22.203 14.036 11.749 1.00 13.71 ? 4 DA A "C3'" 1 ATOM 74 O "O3'" . DA A 1 4 ? 22.630 12.718 11.404 1.00 13.22 ? 4 DA A "O3'" 1 ATOM 75 C "C2'" . DA A 1 4 ? 20.952 14.482 10.924 1.00 12.20 ? 4 DA A "C2'" 1 ATOM 76 C "C1'" . DA A 1 4 ? 19.821 13.912 11.740 1.00 10.11 ? 4 DA A "C1'" 1 ATOM 77 N N9 . DA A 1 4 ? 18.621 14.703 11.681 1.00 8.60 ? 4 DA A N9 1 ATOM 78 C C8 . DA A 1 4 ? 18.459 16.059 11.739 1.00 8.12 ? 4 DA A C8 1 ATOM 79 N N7 . DA A 1 4 ? 17.208 16.427 11.699 1.00 6.89 ? 4 DA A N7 1 ATOM 80 C C5 . DA A 1 4 ? 16.508 15.229 11.604 1.00 6.40 ? 4 DA A C5 1 ATOM 81 C C6 . DA A 1 4 ? 15.136 14.932 11.508 1.00 6.61 ? 4 DA A C6 1 ATOM 82 N N6 . DA A 1 4 ? 14.172 15.865 11.500 1.00 5.57 ? 4 DA A N6 1 ATOM 83 N N1 . DA A 1 4 ? 14.820 13.642 11.417 1.00 6.61 ? 4 DA A N1 1 ATOM 84 C C2 . DA A 1 4 ? 15.769 12.736 11.420 1.00 6.07 ? 4 DA A C2 1 ATOM 85 N N3 . DA A 1 4 ? 17.074 12.877 11.501 1.00 8.02 ? 4 DA A N3 1 ATOM 86 C C4 . DA A 1 4 ? 17.367 14.184 11.591 1.00 5.57 ? 4 DA A C4 1 ATOM 87 H H61 . DA A 1 4 ? 14.408 16.847 11.572 1.00 10.00 ? 4 DA A H61 1 ATOM 88 H H62 . DA A 1 4 ? 13.207 15.574 11.418 1.00 10.00 ? 4 DA A H62 1 ATOM 89 P P . DC A 1 5 ? 23.444 12.474 10.061 1.00 12.47 ? 5 DC A P 1 ATOM 90 O OP1 . DC A 1 5 ? 24.224 11.222 10.221 1.00 12.58 ? 5 DC A OP1 1 ATOM 91 O OP2 . DC A 1 5 ? 24.125 13.709 9.643 1.00 10.64 ? 5 DC A OP2 1 ATOM 92 O "O5'" . DC A 1 5 ? 22.302 12.214 8.991 1.00 11.81 ? 5 DC A "O5'" 1 ATOM 93 C "C5'" . DC A 1 5 ? 21.570 11.000 9.025 1.00 12.56 ? 5 DC A "C5'" 1 ATOM 94 C "C4'" . DC A 1 5 ? 20.383 11.090 8.069 1.00 13.12 ? 5 DC A "C4'" 1 ATOM 95 O "O4'" . DC A 1 5 ? 19.430 12.069 8.588 1.00 12.98 ? 5 DC A "O4'" 1 ATOM 96 C "C3'" . DC A 1 5 ? 20.879 11.556 6.660 1.00 13.44 ? 5 DC A "C3'" 1 ATOM 97 O "O3'" . DC A 1 5 ? 20.203 10.841 5.650 1.00 13.65 ? 5 DC A "O3'" 1 ATOM 98 C "C2'" . DC A 1 5 ? 20.363 12.987 6.634 1.00 12.57 ? 5 DC A "C2'" 1 ATOM 99 C "C1'" . DC A 1 5 ? 19.071 12.780 7.430 1.00 11.05 ? 5 DC A "C1'" 1 ATOM 100 N N1 . DC A 1 5 ? 18.377 14.026 7.815 1.00 10.92 ? 5 DC A N1 1 ATOM 101 C C2 . DC A 1 5 ? 17.019 13.880 8.028 1.00 8.22 ? 5 DC A C2 1 ATOM 102 O O2 . DC A 1 5 ? 16.446 12.795 8.001 1.00 9.87 ? 5 DC A O2 1 ATOM 103 N N3 . DC A 1 5 ? 16.306 14.971 8.288 1.00 8.07 ? 5 DC A N3 1 ATOM 104 C C4 . DC A 1 5 ? 16.855 16.183 8.364 1.00 8.31 ? 5 DC A C4 1 ATOM 105 N N4 . DC A 1 5 ? 15.999 17.168 8.588 1.00 8.80 ? 5 DC A N4 1 ATOM 106 C C5 . DC A 1 5 ? 18.259 16.383 8.182 1.00 9.83 ? 5 DC A C5 1 ATOM 107 C C6 . DC A 1 5 ? 18.982 15.271 7.906 1.00 9.83 ? 5 DC A C6 1 ATOM 108 H H41 . DC A 1 5 ? 16.240 18.148 8.635 1.00 10.00 ? 5 DC A H41 1 ATOM 109 H H42 . DC A 1 5 ? 15.043 16.858 8.709 1.00 10.00 ? 5 DC A H42 1 ATOM 110 P P . DA A 1 6 ? 20.992 9.709 4.836 1.00 14.78 ? 6 DA A P 1 ATOM 111 O OP1 . DA A 1 6 ? 21.525 8.711 5.796 1.00 14.22 ? 6 DA A OP1 1 ATOM 112 O OP2 . DA A 1 6 ? 21.886 10.369 3.873 1.00 14.53 ? 6 DA A OP2 1 ATOM 113 O "O5'" . DA A 1 6 ? 19.790 9.082 4.026 1.00 12.06 ? 6 DA A "O5'" 1 ATOM 114 C "C5'" . DA A 1 6 ? 18.902 8.144 4.632 1.00 11.95 ? 6 DA A "C5'" 1 ATOM 115 C "C4'" . DA A 1 6 ? 17.851 7.615 3.625 1.00 10.86 ? 6 DA A "C4'" 1 ATOM 116 O "O4'" . DA A 1 6 ? 16.965 8.697 3.231 1.00 9.90 ? 6 DA A "O4'" 1 ATOM 117 C "C3'" . DA A 1 6 ? 18.545 7.023 2.343 1.00 9.60 ? 6 DA A "C3'" 1 ATOM 118 O "O3'" . DA A 1 6 ? 17.716 6.022 1.764 1.00 11.80 ? 6 DA A "O3'" 1 ATOM 119 C "C2'" . DA A 1 6 ? 18.533 8.259 1.430 1.00 9.35 ? 6 DA A "C2'" 1 ATOM 120 C "C1'" . DA A 1 6 ? 17.205 8.986 1.836 1.00 8.57 ? 6 DA A "C1'" 1 ATOM 121 N N9 . DA A 1 6 ? 17.328 10.431 1.738 1.00 6.84 ? 6 DA A N9 1 ATOM 122 C C8 . DA A 1 6 ? 18.460 11.191 1.774 1.00 6.15 ? 6 DA A C8 1 ATOM 123 N N7 . DA A 1 6 ? 18.223 12.467 1.699 1.00 5.48 ? 6 DA A N7 1 ATOM 124 C C5 . DA A 1 6 ? 16.844 12.557 1.606 1.00 5.37 ? 6 DA A C5 1 ATOM 125 C C6 . DA A 1 6 ? 15.991 13.656 1.494 1.00 4.94 ? 6 DA A C6 1 ATOM 126 N N6 . DA A 1 6 ? 16.412 14.907 1.476 1.00 5.86 ? 6 DA A N6 1 ATOM 127 N N1 . DA A 1 6 ? 14.701 13.389 1.410 1.00 5.00 ? 6 DA A N1 1 ATOM 128 C C2 . DA A 1 6 ? 14.269 12.129 1.436 1.00 4.96 ? 6 DA A C2 1 ATOM 129 N N3 . DA A 1 6 ? 14.970 11.014 1.543 1.00 5.98 ? 6 DA A N3 1 ATOM 130 C C4 . DA A 1 6 ? 16.278 11.324 1.626 1.00 4.52 ? 6 DA A C4 1 ATOM 131 H "HO3'" . DA A 1 6 ? 16.833 6.386 1.636 1.00 10.00 ? 6 DA A "HO3'" 1 ATOM 132 H H61 . DA A 1 6 ? 17.399 15.115 1.520 1.00 10.00 ? 6 DA A H61 1 ATOM 133 H H62 . DA A 1 6 ? 15.739 15.656 1.410 1.00 10.00 ? 6 DA A H62 1 HETATM 134 C C1 . DM7 B 2 . ? 15.292 18.323 4.975 1.00 14.87 ? 7 DM7 A C1 1 HETATM 135 C C2 . DM7 B 2 . ? 16.455 19.102 4.998 1.00 14.28 ? 7 DM7 A C2 1 HETATM 136 C C3 . DM7 B 2 . ? 17.686 18.412 4.988 1.00 14.61 ? 7 DM7 A C3 1 HETATM 137 C C4 . DM7 B 2 . ? 17.785 17.026 4.944 1.00 12.52 ? 7 DM7 A C4 1 HETATM 138 C C5 . DM7 B 2 . ? 16.544 14.852 4.888 1.00 10.18 ? 7 DM7 A C5 1 HETATM 139 C C6 . DM7 B 2 . ? 15.321 12.719 4.847 1.00 10.35 ? 7 DM7 A C6 1 HETATM 140 C C7 . DM7 B 2 . ? 14.118 10.558 4.838 1.00 10.37 ? 7 DM7 A C7 1 HETATM 141 C C8 . DM7 B 2 . ? 12.875 9.796 4.620 1.00 12.40 ? 7 DM7 A C8 1 HETATM 142 C C9 . DM7 B 2 . ? 11.752 10.484 5.481 1.00 12.82 ? 7 DM7 A C9 1 HETATM 143 C C10 . DM7 B 2 . ? 11.625 11.925 4.851 1.00 12.63 ? 7 DM7 A C10 1 HETATM 144 C C11 . DM7 B 2 . ? 12.924 14.080 4.881 1.00 10.18 ? 7 DM7 A C11 1 HETATM 145 C C12 . DM7 B 2 . ? 14.169 16.204 4.925 1.00 10.61 ? 7 DM7 A C12 1 HETATM 146 C C13 . DM7 B 2 . ? 10.454 9.678 5.186 1.00 13.47 ? 7 DM7 A C13 1 HETATM 147 C C14 . DM7 B 2 . ? 10.036 8.543 6.005 1.00 14.82 ? 7 DM7 A C14 1 HETATM 148 C C15 . DM7 B 2 . ? 15.376 16.905 4.938 1.00 12.32 ? 7 DM7 A C15 1 HETATM 149 C C16 . DM7 B 2 . ? 16.598 16.242 4.919 1.00 11.91 ? 7 DM7 A C16 1 HETATM 150 C C17 . DM7 B 2 . ? 15.348 14.119 4.874 1.00 9.33 ? 7 DM7 A C17 1 HETATM 151 C C18 . DM7 B 2 . ? 14.128 14.796 4.893 1.00 9.68 ? 7 DM7 A C18 1 HETATM 152 C C19 . DM7 B 2 . ? 14.081 12.025 4.845 1.00 10.20 ? 7 DM7 A C19 1 HETATM 153 C C20 . DM7 B 2 . ? 12.871 12.695 4.863 1.00 10.69 ? 7 DM7 A C20 1 HETATM 154 C C21 . DM7 B 2 . ? 20.309 17.125 4.968 1.00 13.66 ? 7 DM7 A C21 1 HETATM 155 O O4 . DM7 B 2 . ? 19.044 16.419 4.932 1.00 12.75 ? 7 DM7 A O4 1 HETATM 156 O O5 . DM7 B 2 . ? 17.715 14.129 4.851 1.00 8.26 ? 7 DM7 A O5 1 HETATM 157 O O6 . DM7 B 2 . ? 16.489 11.936 4.829 1.00 10.42 ? 7 DM7 A O6 1 HETATM 158 O O7 . DM7 B 2 . ? 14.661 10.228 6.051 1.00 11.88 ? 7 DM7 A O7 1 HETATM 159 O O9 . DM7 B 2 . ? 11.719 10.671 6.984 1.00 13.78 ? 7 DM7 A O9 1 HETATM 160 O O11 . DM7 B 2 . ? 11.699 14.742 4.911 1.00 9.19 ? 7 DM7 A O11 1 HETATM 161 O O12 . DM7 B 2 . ? 13.032 16.918 4.926 1.00 11.91 ? 7 DM7 A O12 1 HETATM 162 O O13 . DM7 B 2 . ? 9.759 10.014 3.997 1.00 14.94 ? 7 DM7 A O13 1 HETATM 163 O O14 . DM7 B 2 . ? 8.637 8.320 5.874 1.00 13.91 ? 7 DM7 A O14 1 HETATM 164 C "C1'" . DM7 B 2 . ? 15.421 9.131 6.475 1.00 12.86 ? 7 DM7 A "C1'" 1 HETATM 165 C "C2'" . DM7 B 2 . ? 16.558 9.506 7.478 1.00 13.20 ? 7 DM7 A "C2'" 1 HETATM 166 C "C3'" . DM7 B 2 . ? 15.948 9.766 8.845 1.00 12.80 ? 7 DM7 A "C3'" 1 HETATM 167 C "C4'" . DM7 B 2 . ? 15.085 8.526 9.276 1.00 12.82 ? 7 DM7 A "C4'" 1 HETATM 168 C "C5'" . DM7 B 2 . ? 13.979 8.327 8.176 1.00 12.82 ? 7 DM7 A "C5'" 1 HETATM 169 C "C6'" . DM7 B 2 . ? 12.954 7.170 8.454 1.00 11.61 ? 7 DM7 A "C6'" 1 HETATM 170 O "O5'" . DM7 B 2 . ? 14.613 8.050 6.919 1.00 13.70 ? 7 DM7 A "O5'" 1 HETATM 171 N "N3'" . DM7 B 2 . ? 17.086 9.908 9.770 1.00 14.34 ? 7 DM7 A "N3'" 1 HETATM 172 I "I4'" . DM7 B 2 . ? 16.203 6.722 9.707 1.00 14.63 ? 7 DM7 A "I4'" 1 HETATM 173 O O . HOH C 3 . ? 15.926 5.674 6.114 1.00 28.43 ? 8 HOH A O 1 HETATM 174 O O . HOH C 3 . ? 8.683 6.088 4.050 1.00 37.88 ? 9 HOH A O 1 HETATM 175 O O . HOH C 3 . ? 17.332 21.185 13.319 1.00 24.32 ? 10 HOH A O 1 HETATM 176 O O . HOH C 3 . ? 20.239 24.665 16.749 1.00 29.56 ? 11 HOH A O 1 HETATM 177 O O . HOH C 3 . ? 8.962 23.887 20.525 1.00 32.64 ? 12 HOH A O 1 HETATM 178 O O . HOH C 3 . ? 26.118 16.125 13.365 1.00 29.81 ? 13 HOH A O 1 HETATM 179 O O . HOH C 3 . ? 20.410 19.113 10.902 1.00 23.78 ? 14 HOH A O 1 HETATM 180 O O . HOH C 3 . ? 22.504 15.436 7.760 1.00 19.77 ? 15 HOH A O 1 HETATM 181 O O . HOH C 3 . ? 18.124 4.488 12.797 1.00 40.47 ? 16 HOH A O 1 HETATM 182 O O . HOH C 3 . ? 8.840 12.139 24.883 1.00 17.29 ? 17 HOH A O 1 HETATM 183 O O . HOH C 3 . ? 13.546 8.506 1.374 1.00 17.03 ? 18 HOH A O 1 HETATM 184 O O . HOH C 3 . ? 6.098 12.725 23.643 1.00 26.28 ? 19 HOH A O 1 HETATM 185 O O . HOH C 3 . ? 9.601 20.497 15.503 1.00 36.38 ? 20 HOH A O 1 HETATM 186 O O . HOH C 3 . ? 10.580 17.604 14.532 1.00 25.53 ? 21 HOH A O 1 HETATM 187 O O . HOH C 3 . ? 8.003 14.390 17.611 1.00 38.14 ? 22 HOH A O 1 HETATM 188 O O . HOH C 3 . ? 19.398 8.636 10.425 1.00 17.23 ? 23 HOH A O 1 HETATM 189 O O . HOH C 3 . ? 18.227 7.604 13.518 1.00 23.26 ? 24 HOH A O 1 HETATM 190 O O . HOH C 3 . ? 16.565 9.576 12.694 1.00 11.06 ? 25 HOH A O 1 HETATM 191 O O . HOH C 3 . ? 23.856 8.240 9.717 1.00 29.97 ? 26 HOH A O 1 HETATM 192 O O . HOH C 3 . ? 22.925 14.556 4.825 1.00 31.80 ? 27 HOH A O 1 HETATM 193 O O . HOH C 3 . ? 19.771 14.373 2.708 1.00 18.27 ? 28 HOH A O 1 HETATM 194 O O . HOH C 3 . ? 10.640 19.289 5.631 1.00 21.77 ? 29 HOH A O 1 HETATM 195 O O . HOH C 3 . ? 18.662 5.230 6.790 1.00 19.40 ? 30 HOH A O 1 HETATM 196 O O . HOH C 3 . ? 23.721 17.291 4.410 1.00 32.28 ? 31 HOH A O 1 HETATM 197 O O . HOH C 3 . ? 16.433 19.056 11.731 1.00 17.44 ? 32 HOH A O 1 HETATM 198 O O . HOH C 3 . ? 22.027 17.949 8.426 1.00 23.00 ? 33 HOH A O 1 HETATM 199 O O . HOH C 3 . ? 18.470 18.604 -1.603 1.00 30.78 ? 34 HOH A O 1 HETATM 200 O O . HOH C 3 . ? 11.385 22.492 19.180 1.00 17.73 ? 35 HOH A O 1 HETATM 201 O O . HOH C 3 . ? 15.594 23.367 12.381 1.00 38.55 ? 36 HOH A O 1 HETATM 202 O O . HOH C 3 . ? 13.058 23.650 15.622 1.00 41.69 ? 37 HOH A O 1 HETATM 203 O O . HOH C 3 . ? 24.837 12.866 14.829 1.00 35.08 ? 38 HOH A O 1 HETATM 204 O O . HOH C 3 . ? 7.210 19.031 24.519 1.00 28.82 ? 39 HOH A O 1 HETATM 205 O O . HOH C 3 . ? 8.586 21.342 19.771 1.00 33.91 ? 40 HOH A O 1 HETATM 206 O O . HOH C 3 . ? 11.649 5.925 4.059 1.00 35.12 ? 41 HOH A O 1 HETATM 207 O O . HOH C 3 . ? 5.589 14.712 21.530 1.00 34.64 ? 42 HOH A O 1 HETATM 208 O O . HOH C 3 . ? 8.474 17.757 18.075 1.00 37.83 ? 43 HOH A O 1 HETATM 209 O O . HOH C 3 . ? 14.976 23.262 26.092 1.00 35.47 ? 44 HOH A O 1 HETATM 210 O O . HOH C 3 . ? 10.674 9.830 1.393 1.00 28.98 ? 45 HOH A O 1 HETATM 211 O O . HOH C 3 . ? 24.202 8.973 6.738 1.00 30.41 ? 46 HOH A O 1 HETATM 212 O O . HOH C 3 . ? 20.475 6.843 7.802 1.00 32.20 ? 47 HOH A O 1 HETATM 213 O O . HOH C 3 . ? 17.228 20.101 8.765 1.00 35.60 ? 48 HOH A O 1 HETATM 214 O O . HOH C 3 . ? 24.741 11.266 5.533 1.00 40.27 ? 49 HOH A O 1 HETATM 215 O O . HOH C 3 . ? 13.670 19.850 11.551 1.00 30.70 ? 50 HOH A O 1 HETATM 216 O O . HOH C 3 . ? 5.165 8.140 5.975 1.00 33.91 ? 51 HOH A O 1 HETATM 217 O O . HOH C 3 . ? 17.391 3.050 3.402 1.00 41.45 ? 52 HOH A O 1 HETATM 218 O O . HOH C 3 . ? 15.457 25.406 17.717 1.00 40.02 ? 53 HOH A O 1 HETATM 219 O O . HOH C 3 . ? 10.432 24.867 22.451 1.00 38.22 ? 54 HOH A O 1 HETATM 220 O O . HOH C 3 . ? 18.272 26.193 15.424 1.00 32.88 ? 55 HOH A O 1 HETATM 221 O O . HOH C 3 . ? 15.254 4.609 2.361 1.00 44.28 ? 56 HOH A O 1 #