0.009058
0.005230
0.000000
0.000000
0.010459
0.000000
0.000000
0.000000
0.013021
0.00000
0.00000
0.00000
CIS PROLINE - PRO 12
Oganesyan, V.Yu.
Avaeva, S.M.
Harutyunyan, E.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.00
90.00
120.00
110.400
110.400
76.800
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mn 2
54.938
MANGANESE (II) ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
MN
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
R
C
N
310
N
O
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
N
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
N
360
N
O
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
NE
Febs Lett.
FEBLAL
0165
0014-5793
377
44
46
10.1016/0014-5793(95)01310-5
8543015
Mg2+ activation of Escherichia coli inorganic pyrophosphatase.
1995
10.2210/pdb1ino/pdb
pdb_00001ino
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
2DIMENSION-GAS CAMERA/INSTITUTE OF CRYSTALLOGRAPHY,MOSCOW
1994-10
M
x-ray
1
1.5418
1.0
1.5418
19597.334
INORGANIC PYROPHOSPHATASE
3.6.1.1
1
man
polymer
54.938
MANGANESE (II) ION
1
syn
non-polymer
18.015
water
145
nat
water
PYROPHOSPHATE HYDROLASE
no
no
SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQ
PGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA
AKAEIVASFERAKNK
SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQ
PGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA
AKAEIVASFERAKNK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
JM109
Escherichia
sample
562
Escherichia coli
PYROPHOSPHATASE ESCHERICHIA COLI
562
Escherichia coli
PUC19
2.30
46.44
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
Other
1
0
1996-04-03
1
1
2008-03-04
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1995-10-03
REL
MN
MANGANESE (II) ION
HOH
water
MN
176
2
MN
MN
176
A
HOH
177
3
HOH
HOH
177
A
HOH
178
3
HOH
HOH
178
A
HOH
179
3
HOH
HOH
179
A
HOH
180
3
HOH
HOH
180
A
HOH
181
3
HOH
HOH
181
A
HOH
182
3
HOH
HOH
182
A
HOH
183
3
HOH
HOH
183
A
HOH
184
3
HOH
HOH
184
A
HOH
185
3
HOH
HOH
185
A
HOH
186
3
HOH
HOH
186
A
HOH
187
3
HOH
HOH
187
A
HOH
188
3
HOH
HOH
188
A
HOH
189
3
HOH
HOH
189
A
HOH
190
3
HOH
HOH
190
A
HOH
191
3
HOH
HOH
191
A
HOH
192
3
HOH
HOH
192
A
HOH
193
3
HOH
HOH
193
A
HOH
194
3
HOH
HOH
194
A
HOH
195
3
HOH
HOH
195
A
HOH
196
3
HOH
HOH
196
A
HOH
197
3
HOH
HOH
197
A
HOH
198
3
HOH
HOH
198
A
HOH
199
3
HOH
HOH
199
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
HOH
212
3
HOH
HOH
212
A
HOH
213
3
HOH
HOH
213
A
HOH
214
3
HOH
HOH
214
A
HOH
215
3
HOH
HOH
215
A
HOH
216
3
HOH
HOH
216
A
HOH
217
3
HOH
HOH
217
A
HOH
218
3
HOH
HOH
218
A
HOH
219
3
HOH
HOH
219
A
HOH
220
3
HOH
HOH
220
A
HOH
221
3
HOH
HOH
221
A
HOH
222
3
HOH
HOH
222
A
HOH
223
3
HOH
HOH
223
A
HOH
224
3
HOH
HOH
224
A
HOH
225
3
HOH
HOH
225
A
HOH
226
3
HOH
HOH
226
A
HOH
227
3
HOH
HOH
227
A
HOH
228
3
HOH
HOH
228
A
HOH
229
3
HOH
HOH
229
A
HOH
230
3
HOH
HOH
230
A
HOH
231
3
HOH
HOH
231
A
HOH
232
3
HOH
HOH
232
A
HOH
233
3
HOH
HOH
233
A
HOH
234
3
HOH
HOH
234
A
HOH
235
3
HOH
HOH
235
A
HOH
236
3
HOH
HOH
236
A
HOH
237
3
HOH
HOH
237
A
HOH
238
3
HOH
HOH
238
A
HOH
239
3
HOH
HOH
239
A
HOH
240
3
HOH
HOH
240
A
HOH
241
3
HOH
HOH
241
A
HOH
242
3
HOH
HOH
242
A
HOH
243
3
HOH
HOH
243
A
HOH
244
3
HOH
HOH
244
A
HOH
245
3
HOH
HOH
245
A
HOH
246
3
HOH
HOH
246
A
HOH
247
3
HOH
HOH
247
A
HOH
248
3
HOH
HOH
248
A
HOH
249
3
HOH
HOH
249
A
HOH
250
3
HOH
HOH
250
A
HOH
251
3
HOH
HOH
251
A
HOH
252
3
HOH
HOH
252
A
HOH
253
3
HOH
HOH
253
A
HOH
254
3
HOH
HOH
254
A
HOH
255
3
HOH
HOH
255
A
HOH
256
3
HOH
HOH
256
A
HOH
257
3
HOH
HOH
257
A
HOH
258
3
HOH
HOH
258
A
HOH
259
3
HOH
HOH
259
A
HOH
260
3
HOH
HOH
260
A
HOH
261
3
HOH
HOH
261
A
HOH
262
3
HOH
HOH
262
A
HOH
263
3
HOH
HOH
263
A
HOH
264
3
HOH
HOH
264
A
HOH
265
3
HOH
HOH
265
A
HOH
266
3
HOH
HOH
266
A
HOH
267
3
HOH
HOH
267
A
HOH
268
3
HOH
HOH
268
A
HOH
269
3
HOH
HOH
269
A
HOH
270
3
HOH
HOH
270
A
HOH
271
3
HOH
HOH
271
A
HOH
272
3
HOH
HOH
272
A
HOH
273
3
HOH
HOH
273
A
HOH
274
3
HOH
HOH
274
A
HOH
275
3
HOH
HOH
275
A
HOH
276
3
HOH
HOH
276
A
HOH
277
3
HOH
HOH
277
A
HOH
278
3
HOH
HOH
278
A
HOH
279
3
HOH
HOH
279
A
HOH
280
3
HOH
HOH
280
A
HOH
281
3
HOH
HOH
281
A
HOH
282
3
HOH
HOH
282
A
HOH
283
3
HOH
HOH
283
A
HOH
284
3
HOH
HOH
284
A
HOH
285
3
HOH
HOH
285
A
HOH
286
3
HOH
HOH
286
A
HOH
287
3
HOH
HOH
287
A
HOH
288
3
HOH
HOH
288
A
HOH
289
3
HOH
HOH
289
A
HOH
290
3
HOH
HOH
290
A
HOH
291
3
HOH
HOH
291
A
HOH
292
3
HOH
HOH
292
A
HOH
293
3
HOH
HOH
293
A
HOH
294
3
HOH
HOH
294
A
HOH
295
3
HOH
HOH
295
A
HOH
296
3
HOH
HOH
296
A
HOH
297
3
HOH
HOH
297
A
HOH
298
3
HOH
HOH
298
A
HOH
299
3
HOH
HOH
299
A
HOH
300
3
HOH
HOH
300
A
HOH
301
3
HOH
HOH
301
A
HOH
302
3
HOH
HOH
302
A
HOH
303
3
HOH
HOH
303
A
HOH
304
3
HOH
HOH
304
A
HOH
305
3
HOH
HOH
305
A
HOH
306
3
HOH
HOH
306
A
HOH
307
3
HOH
HOH
307
A
HOH
308
3
HOH
HOH
308
A
HOH
309
3
HOH
HOH
309
A
HOH
310
3
HOH
HOH
310
A
HOH
311
3
HOH
HOH
311
A
HOH
312
3
HOH
HOH
312
A
HOH
313
3
HOH
HOH
313
A
HOH
314
3
HOH
HOH
314
A
HOH
315
3
HOH
HOH
315
A
HOH
316
3
HOH
HOH
316
A
HOH
317
3
HOH
HOH
317
A
HOH
318
3
HOH
HOH
318
A
HOH
319
3
HOH
HOH
319
A
HOH
320
3
HOH
HOH
320
A
HOH
321
3
HOH
HOH
321
A
SER
1
n
1
SER
1
A
LEU
2
n
2
LEU
2
A
LEU
3
n
3
LEU
3
A
ASN
4
n
4
ASN
4
A
VAL
5
n
5
VAL
5
A
PRO
6
n
6
PRO
6
A
ALA
7
n
7
ALA
7
A
GLY
8
n
8
GLY
8
A
LYS
9
n
9
LYS
9
A
ASP
10
n
10
ASP
10
A
LEU
11
n
11
LEU
11
A
PRO
12
n
12
PRO
12
A
GLU
13
n
13
GLU
13
A
ASP
14
n
14
ASP
14
A
ILE
15
n
15
ILE
15
A
TYR
16
n
16
TYR
16
A
VAL
17
n
17
VAL
17
A
VAL
18
n
18
VAL
18
A
ILE
19
n
19
ILE
19
A
GLU
20
n
20
GLU
20
A
ILE
21
n
21
ILE
21
A
PRO
22
n
22
PRO
22
A
ALA
23
n
23
ALA
23
A
ASN
24
n
24
ASN
24
A
ALA
25
n
25
ALA
25
A
ASP
26
n
26
ASP
26
A
PRO
27
n
27
PRO
27
A
ILE
28
n
28
ILE
28
A
LYS
29
n
29
LYS
29
A
TYR
30
n
30
TYR
30
A
GLU
31
n
31
GLU
31
A
ILE
32
n
32
ILE
32
A
ASP
33
n
33
ASP
33
A
LYS
34
n
34
LYS
34
A
GLU
35
n
35
GLU
35
A
SER
36
n
36
SER
36
A
GLY
37
n
37
GLY
37
A
ALA
38
n
38
ALA
38
A
LEU
39
n
39
LEU
39
A
PHE
40
n
40
PHE
40
A
VAL
41
n
41
VAL
41
A
ASP
42
n
42
ASP
42
A
ARG
43
n
43
ARG
43
A
PHE
44
n
44
PHE
44
A
MET
45
n
45
MET
45
A
SER
46
n
46
SER
46
A
THR
47
n
47
THR
47
A
ALA
48
n
48
ALA
48
A
MET
49
n
49
MET
49
A
PHE
50
n
50
PHE
50
A
TYR
51
n
51
TYR
51
A
PRO
52
n
52
PRO
52
A
CYS
53
n
53
CYS
53
A
ASN
54
n
54
ASN
54
A
TYR
55
n
55
TYR
55
A
GLY
56
n
56
GLY
56
A
TYR
57
n
57
TYR
57
A
ILE
58
n
58
ILE
58
A
ASN
59
n
59
ASN
59
A
HIS
60
n
60
HIS
60
A
THR
61
n
61
THR
61
A
LEU
62
n
62
LEU
62
A
SER
63
n
63
SER
63
A
LEU
64
n
64
LEU
64
A
ASP
65
n
65
ASP
65
A
GLY
66
n
66
GLY
66
A
ASP
67
n
67
ASP
67
A
PRO
68
n
68
PRO
68
A
VAL
69
n
69
VAL
69
A
ASP
70
n
70
ASP
70
A
VAL
71
n
71
VAL
71
A
LEU
72
n
72
LEU
72
A
VAL
73
n
73
VAL
73
A
PRO
74
n
74
PRO
74
A
THR
75
n
75
THR
75
A
PRO
76
n
76
PRO
76
A
TYR
77
n
77
TYR
77
A
PRO
78
n
78
PRO
78
A
LEU
79
n
79
LEU
79
A
GLN
80
n
80
GLN
80
A
PRO
81
n
81
PRO
81
A
GLY
82
n
82
GLY
82
A
SER
83
n
83
SER
83
A
VAL
84
n
84
VAL
84
A
ILE
85
n
85
ILE
85
A
ARG
86
n
86
ARG
86
A
CYS
87
n
87
CYS
87
A
ARG
88
n
88
ARG
88
A
PRO
89
n
89
PRO
89
A
VAL
90
n
90
VAL
90
A
GLY
91
n
91
GLY
91
A
VAL
92
n
92
VAL
92
A
LEU
93
n
93
LEU
93
A
LYS
94
n
94
LYS
94
A
MET
95
n
95
MET
95
A
THR
96
n
96
THR
96
A
ASP
97
n
97
ASP
97
A
GLU
98
n
98
GLU
98
A
ALA
99
n
99
ALA
99
A
GLY
100
n
100
GLY
100
A
GLU
101
n
101
GLU
101
A
ASP
102
n
102
ASP
102
A
ALA
103
n
103
ALA
103
A
LYS
104
n
104
LYS
104
A
LEU
105
n
105
LEU
105
A
VAL
106
n
106
VAL
106
A
ALA
107
n
107
ALA
107
A
VAL
108
n
108
VAL
108
A
PRO
109
n
109
PRO
109
A
HIS
110
n
110
HIS
110
A
SER
111
n
111
SER
111
A
LYS
112
n
112
LYS
112
A
LEU
113
n
113
LEU
113
A
SER
114
n
114
SER
114
A
LYS
115
n
115
LYS
115
A
GLU
116
n
116
GLU
116
A
TYR
117
n
117
TYR
117
A
ASP
118
n
118
ASP
118
A
HIS
119
n
119
HIS
119
A
ILE
120
n
120
ILE
120
A
LYS
121
n
121
LYS
121
A
ASP
122
n
122
ASP
122
A
VAL
123
n
123
VAL
123
A
ASN
124
n
124
ASN
124
A
ASP
125
n
125
ASP
125
A
LEU
126
n
126
LEU
126
A
PRO
127
n
127
PRO
127
A
GLU
128
n
128
GLU
128
A
LEU
129
n
129
LEU
129
A
LEU
130
n
130
LEU
130
A
LYS
131
n
131
LYS
131
A
ALA
132
n
132
ALA
132
A
GLN
133
n
133
GLN
133
A
ILE
134
n
134
ILE
134
A
ALA
135
n
135
ALA
135
A
HIS
136
n
136
HIS
136
A
PHE
137
n
137
PHE
137
A
PHE
138
n
138
PHE
138
A
GLU
139
n
139
GLU
139
A
HIS
140
n
140
HIS
140
A
TYR
141
n
141
TYR
141
A
LYS
142
n
142
LYS
142
A
ASP
143
n
143
ASP
143
A
LEU
144
n
144
LEU
144
A
GLU
145
n
145
GLU
145
A
LYS
146
n
146
LYS
146
A
GLY
147
n
147
GLY
147
A
LYS
148
n
148
LYS
148
A
TRP
149
n
149
TRP
149
A
VAL
150
n
150
VAL
150
A
LYS
151
n
151
LYS
151
A
VAL
152
n
152
VAL
152
A
GLU
153
n
153
GLU
153
A
GLY
154
n
154
GLY
154
A
TRP
155
n
155
TRP
155
A
GLU
156
n
156
GLU
156
A
ASN
157
n
157
ASN
157
A
ALA
158
n
158
ALA
158
A
GLU
159
n
159
GLU
159
A
ALA
160
n
160
ALA
160
A
ALA
161
n
161
ALA
161
A
LYS
162
n
162
LYS
162
A
ALA
163
n
163
ALA
163
A
GLU
164
n
164
GLU
164
A
ILE
165
n
165
ILE
165
A
VAL
166
n
166
VAL
166
A
ALA
167
n
167
ALA
167
A
SER
168
n
168
SER
168
A
PHE
169
n
169
PHE
169
A
GLU
170
n
170
GLU
170
A
ARG
171
n
171
ARG
171
A
ALA
172
n
172
ALA
172
A
LYS
173
n
173
LYS
173
A
ASN
174
n
174
ASN
174
A
LYS
175
n
175
LYS
175
A
author_and_software_defined_assembly
PISA,PQS
6
hexameric
15280
-136
38170
A
ASP
65
A
OD2
ASP
65
1_555
A
MN
176
B
MN
MN
1_555
A
ASP
70
A
OD2
ASP
70
1_555
135.5
A
ASP
65
A
OD2
ASP
65
1_555
A
MN
176
B
MN
MN
1_555
A
ASP
102
A
OD1
ASP
102
1_555
111.3
A
ASP
70
A
OD2
ASP
70
1_555
A
MN
176
B
MN
MN
1_555
A
ASP
102
A
OD1
ASP
102
1_555
87.5
A
ASP
65
A
OD2
ASP
65
1_555
A
MN
176
B
MN
MN
1_555
A
HOH
256
C
O
HOH
1_555
111.4
A
ASP
70
A
OD2
ASP
70
1_555
A
MN
176
B
MN
MN
1_555
A
HOH
256
C
O
HOH
1_555
85.9
A
ASP
102
A
OD1
ASP
102
1_555
A
MN
176
B
MN
MN
1_555
A
HOH
256
C
O
HOH
1_555
124.7
A
ASP
65
A
OD2
ASP
65
1_555
A
MN
176
B
MN
MN
1_555
A
HOH
276
C
O
HOH
1_555
69.1
A
ASP
70
A
OD2
ASP
70
1_555
A
MN
176
B
MN
MN
1_555
A
HOH
276
C
O
HOH
1_555
73.3
A
ASP
102
A
OD1
ASP
102
1_555
A
MN
176
B
MN
MN
1_555
A
HOH
276
C
O
HOH
1_555
84.5
A
HOH
256
C
O
HOH
1_555
A
MN
176
B
MN
MN
1_555
A
HOH
276
C
O
HOH
1_555
143.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-y+1,x-y+1,z
crystal symmetry operation
55.2000000000
95.6092045778
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_565
-x+y,-x+1,z
crystal symmetry operation
-55.2000000000
95.6092045778
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
10_455
y-1/3,x+1/3,-z+1/3
crystal symmetry operation
-55.2000000000
31.8697348593
25.6000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
11_565
x-y+2/3,-y+4/3,-z+1/3
crystal symmetry operation
0.0000000000
127.4789394371
25.6000000000
-0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
12_555
-x+2/3,-x+y+1/3,-z+1/3
crystal symmetry operation
55.2000000000
31.8697348593
25.6000000000
A
O
ILE
85
A
O
ILE
85
A
N
VAL
17
A
N
VAL
17
A
O
VAL
18
A
O
VAL
18
A
N
TYR
57
A
N
TYR
57
A
O
ASN
54
A
O
ASN
54
A
N
VAL
73
A
N
VAL
73
A
O
ASP
70
A
O
ASP
70
A
N
LEU
105
A
N
LEU
105
A
O
LYS
104
A
O
LYS
104
A
N
LEU
93
A
N
LEU
93
A
O
VAL
92
A
O
VAL
92
A
N
GLU
156
A
N
GLU
156
A
O
THR
96
A
O
THR
96
A
N
LYS
151
A
N
LYS
151
A
O
LYS
29
A
O
LYS
29
A
N
ARG
43
A
N
ARG
43
1
A
HOH
272
C
HOH
1
A
HOH
296
C
HOH
1
13.93
2.30
121.90
135.83
A
A
A
OD1
CG
ND2
ASN
ASN
ASN
24
24
24
N
1
5.37
0.70
120.80
126.17
A
A
A
CB
CG
CD1
PHE
PHE
PHE
40
40
40
N
1
11.36
1.70
113.30
124.66
A
A
A
CA
CB
CG
MET
MET
MET
49
49
49
N
1
3.23
0.50
120.30
123.53
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
88
88
88
N
1
-4.09
0.60
121.00
116.91
A
A
A
CB
CG
CD1
TYR
TYR
TYR
117
117
117
N
1
-13.04
1.90
111.40
98.36
A
A
A
CB
CA
C
VAL
VAL
VAL
123
123
123
N
1
-11.86
1.90
111.40
99.54
A
A
A
CB
CA
C
VAL
VAL
VAL
150
150
150
N
1
13.96
2.20
117.20
131.16
A
A
A
CA
C
N
ALA
ALA
GLU
158
158
159
Y
1
-7.20
1.10
119.40
112.20
A
A
A
NH1
CZ
NH2
ARG
ARG
ARG
171
171
171
N
1
6.39
0.50
120.30
126.69
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
171
171
171
N
1
A
PRO
6
-58.87
174.31
1
A
PRO
27
-63.37
56.78
1
A
HIS
60
70.79
37.36
1
A
SER
63
-83.23
-156.76
1
A
ASP
97
-120.02
-155.45
1
A
SER
114
178.98
138.01
1
A
VAL
150
-160.26
117.39
1
A
GLU
153
-50.26
-91.73
21.66
0.160
2.2
12.0
42300
1
0.0
2.2
12.0
145
1527
1
0
1381
0.018
0.020
0.045
0.040
0.051
0.050
1.115
1.500
1.859
2.200
1.682
2.200
2.370
2.500
0.176
0.200
0.228
0.200
0.187
0.200
0.856
10.000
22.773
15.000
22.782
45.000
1INO
8948
0.08
1
97.4
refinement
PROLSQ
RECOMBINANT INORGANIC PYROPHOSPHATASE FROM ESCHERICHIA COLI
1
N
N
2
N
N
3
N
N
A
LYS
115
A
LYS
115
HELX_P
A
TYR
117
A
TYR
117
5
1
3
A
GLU
128
A
GLU
128
HELX_P
A
HIS
140
A
HIS
140
1
2
13
A
ALA
158
A
ALA
158
HELX_P
A
LYS
173
A
LYS
173
1
3
16
metalc
2.075
A
ASP
65
A
OD2
ASP
65
1_555
A
MN
176
B
MN
MN
1_555
metalc
2.152
A
ASP
70
A
OD2
ASP
70
1_555
A
MN
176
B
MN
MN
1_555
metalc
2.218
A
ASP
102
A
OD1
ASP
102
1_555
A
MN
176
B
MN
MN
1_555
metalc
2.185
A
MN
176
B
MN
MN
1_555
A
HOH
256
C
O
HOH
1_555
metalc
2.571
A
MN
176
B
MN
MN
1_555
A
HOH
276
C
O
HOH
1_555
ACID ANHYDRIDE HYDROLASE
METAL BINDING, MN2+ ION, COMPLEX, ACID ANHYDRIDE HYDROLASE
A
LEU
11
A
LEU
11
1
A
PRO
12
A
PRO
12
-1.43
IPYR_ECOLI
UNP
1
1
P0A7A9
SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQ
PGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEA
AKAEIVASFERAKNK
1
175
1INO
1
175
P0A7A9
A
1
1
175
7
2
2
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
84
A
VAL
84
A
CYS
87
A
CYS
87
A
ILE
15
A
ILE
15
A
ILE
21
A
ILE
21
A
ASN
54
A
ASN
54
A
TYR
57
A
TYR
57
A
ASP
70
A
ASP
70
A
VAL
73
A
VAL
73
A
LYS
104
A
LYS
104
A
PRO
109
A
PRO
109
A
CYS
87
A
CYS
87
A
LEU
93
A
LEU
93
A
TRP
155
A
TRP
155
A
ASN
157
A
ASN
157
A
MET
95
A
MET
95
A
ASP
97
A
ASP
97
A
VAL
150
A
VAL
150
A
VAL
152
A
VAL
152
A
ILE
28
A
ILE
28
A
ILE
32
A
ILE
32
A
LEU
39
A
LEU
39
A
PHE
44
A
PHE
44
BINDING SITE FOR RESIDUE MN A 176
A
MN
176
Software
5
A
ASP
65
A
ASP
65
5
1_555
A
ASP
70
A
ASP
70
5
1_555
A
ASP
102
A
ASP
102
5
1_555
A
HOH
256
C
HOH
5
1_555
A
HOH
276
C
HOH
5
1_555
155
H 3 2