0.008257 0.000000 0.000000 0.000000 0.006112 0.000000 0.000000 0.000000 0.009147 0.00000 0.00000 0.00000 Tahirov, T.H. Ogata, K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 121.108 163.600 109.326 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Au 1 196.967 GOLD ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N AU N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N O N 90 N P N 91 N O N 92 N O N 93 N O N 94 N C N 95 R C N 96 N O N 97 S C N 98 N O N 99 N C N 100 R C Y 101 N N Y 102 N C Y 103 N N Y 104 N C Y 105 N C N 106 N N Y 107 N N Y 108 N C Y 109 N N Y 110 N C N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N O N 126 N P N 127 N O N 128 N O N 129 N O N 130 N C N 131 R C N 132 N O N 133 S C N 134 N O N 135 N C N 136 R C N 137 N N N 138 N C N 139 N O N 140 N N N 141 N C N 142 N N N 143 N C N 144 N C N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N P N 161 N O N 162 N O N 163 N O N 164 N C N 165 R C N 166 N O N 167 S C N 168 N O N 169 N C N 170 R C Y 171 N N Y 172 N C Y 173 N N Y 174 N C N 175 N C N 176 N O N 177 N N N 178 N C N 179 N N N 180 N N Y 181 N C N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N O N 197 N P N 198 N O N 199 N O N 200 N O N 201 N C N 202 R C N 203 N O N 204 S C N 205 N O N 206 N C N 207 R C N 208 N N N 209 N C N 210 N O N 211 N N N 212 N C N 213 N O N 214 N C N 215 N C N 216 N C N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 N C N 237 N C N 238 N C N 239 N O N 240 N N N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C N 257 N C N 258 N C N 259 N O N 260 N O N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 N C N 273 N C N 274 N O N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C Y 286 N C Y 287 N N Y 288 N C Y 289 N C Y 290 N N N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N O N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 S C N 310 N C N 311 N C N 312 N C N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 N C N 332 N C N 333 N C N 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C N 354 N C N 355 N C N 356 N C N 357 N N N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C N 379 N C N 380 N S N 381 N C N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C Y 404 N C N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N N N 418 S C N 419 N C N 420 N O N 421 N C N 422 N C N 423 N C N 424 N O N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N N N 435 S C N 436 N C N 437 N O N 438 N C N 439 N O N 440 N O N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N N N 449 S C N 450 N C N 451 N O N 452 R C N 453 N O N 454 N C N 455 N O N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N N N 466 S C N 467 N C N 468 N O N 469 N C Y 470 N C Y 471 N C Y 472 N C Y 473 N N Y 474 N C Y 475 N C Y 476 N C Y 477 N C Y 478 N C N 479 N O N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N N N 493 S C N 494 N C N 495 N O N 496 N C Y 497 N C Y 498 N C Y 499 N C Y 500 N C Y 501 N C Y 502 N C N 503 N O N 504 N O N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N N N 517 S C N 518 N C N 519 N O N 520 N C N 521 N C N 522 N C N 523 N O N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing Y 494 N doub Y 495 N sing Y 496 N sing N 497 N sing Y 498 N doub N 499 N sing Y 500 N doub N 501 N sing Y 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N doub N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 104 755 767 10.1016/S0092-8674(01)00271-9 11257229 Structural analyses of DNA recognition by the AML1/Runx-1 Runt domain and its allosteric control by CBFbeta. 2001 To Be Published 0353 Crystallization and Preliminary X-Ray Analyses of Quaternary, Ternary and Binary Protein-DNA Complexes with Involvement of AML1/Runx-1/Cbfalpha Runt Domain, Cbfbeta and the C/EBPbeta bZIP Region 10.2210/pdb1io4/pdb pdb_00001io4 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 MIRRORS IMAGE PLATE 2000-04-07 RIGAKU RAXIS IV DIAMOND THREE WAVELENGTH FROM GOLD DERIVATIVE M x-ray 1 1.000 1.0 BL45XU SPring-8 1.000 1.000 SYNCHROTRON SPRING-8 BEAMLINE BL45XU 8018.176 CSF-1R PROMOTER 1 syn polymer 7956.156 CSF-1R PROMOTER 1 syn polymer 9381.868 CAAT/ENHANCER BINDING PROTEIN BETA BZIP DOMAIN 2 man polymer 13715.696 RUNT-RELATED TRANSCRIPTION FACTOR 1 RUNT DOMAIN 1 man polymer 16613.648 CORE-BINDING FACTOR, BETA SUBUNIT CORE DOMAIN 1 man polymer 196.967 GOLD ION 3 syn non-polymer 18.015 water 8 nat water C/EBP BETA CORE-BINDING FACTOR, ALPHA B SUBUNIT, PEPB2-ALPHA B PEBP2-BETA, CBF-BETA no no (DG)(DA)(DA)(DG)(DA)(DT)(DT)(DT)(DC)(DC)(DA)(DA)(DA)(DC)(DT)(DC)(DT)(DG)(DT)(DG) (DG)(DT)(DT)(DG)(DC)(DG) GAAGATTTCCAAACTCTGTGGTTGCG E polydeoxyribonucleotide no no (DC)(DC)(DG)(DC)(DA)(DA)(DC)(DC)(DA)(DC)(DA)(DG)(DA)(DG)(DT)(DT)(DT)(DG)(DG)(DA) (DA)(DA)(DT)(DC)(DT)(DT) CCGCAACCACAGAGTTTGGAAATCTT F polydeoxyribonucleotide no no VKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPE VKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPE A,B polypeptide(L) no no GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGR SGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQK GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGR SGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQK C polypeptide(L) no no MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQT PSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLHRLDGMGCLEFDEERAQQEDALAQQ MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQT PSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLHRLDGMGCLEFDEERAQQEDALAQQ D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia Escherichia coli sample 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) PLASMID PAR2156 house mouse Mus Escherichia Escherichia coli sample 10090 Mus musculus 469008 Escherichia coli BL21(DE3) BL21(DE3) PLASMID PAR2156 house mouse Mus Escherichia Escherichia coli sample 10090 Mus musculus 469008 Escherichia coli BL21(DE3) BL21(DE3) PLASMID PAR2156 1 4.12 69.9 VAPOR DIFFUSION, SITTING DROP 5.60 0.2 M potassium chloride, 0.01 M magnesium chloride, 0.01 M DTT, 4.5% V/V PEG 8000, 1% V/V glycerol, 1% V/V MPD, 0.05 M MES buffer pH 5.6, pH 5.60, VAPOR DIFFUSION, SITTING DROP, temperature 297K 297 KCl 1 MgCl2 1 glycerol 1 MPD 1 DTT 1 PEG 8000 1 MES 1 KCl 2 MgCl2 2 MPD 2 -1.060 1 20 E 2 F 26 -0.512 E_DA2:DT26_F 1 -5.457 0.329 -0.418 -0.089 4.390 1 20 E 3 F 25 0.801 E_DA3:DT25_F 2 -12.763 0.071 -0.073 -0.036 5.888 1 19 E 4 F 24 0.882 E_DG4:DC24_F 3 -14.574 0.032 -0.154 -0.066 3.417 1 20 E 5 F 23 -0.409 E_DA5:DT23_F 4 -18.665 0.058 -0.183 -0.106 5.972 1 20 E 6 F 22 -7.322 E_DT6:DA22_F 5 -15.471 -0.181 -0.405 -0.043 -5.755 1 20 E 7 F 21 1.750 E_DT7:DA21_F 6 -12.270 -0.126 0.511 -0.172 0.086 1 20 E 8 F 20 3.752 E_DT8:DA20_F 7 -17.517 0.040 0.596 -0.343 -7.140 1 19 E 9 F 19 1.513 E_DC9:DG19_F 8 -6.109 0.269 0.145 0.066 -9.704 1 19 E 10 F 18 2.286 E_DC10:DG18_F 9 -2.551 0.286 -0.194 -0.148 -5.705 1 20 E 11 F 17 0.009 E_DA11:DT17_F 10 -6.289 -0.111 -0.379 -0.108 9.266 1 20 E 12 F 16 1.420 E_DA12:DT16_F 11 -7.665 0.254 -0.262 -0.054 7.349 1 20 E 13 F 15 1.692 E_DA13:DT15_F 12 -9.163 0.240 -0.072 -0.120 4.998 1 19 E 14 F 14 3.230 E_DC14:DG14_F 13 -10.646 0.041 -0.419 -0.212 -6.324 1 20 E 15 F 13 -8.268 E_DT15:DA13_F 14 -0.953 -0.240 0.342 0.086 -14.018 1 19 E 16 F 12 1.969 E_DC16:DG12_F 15 2.289 0.111 -0.013 -0.106 -5.795 1 20 E 17 F 11 -9.672 E_DT17:DA11_F 16 -10.205 -0.016 -0.020 -0.160 -18.480 1 19 E 18 F 10 0.878 E_DG18:DC10_F 17 0.919 -0.293 -0.487 -0.128 -1.594 1 20 E 19 F 9 -2.026 E_DT19:DA9_F 18 3.003 -0.332 0.040 -0.092 6.897 1 19 E 20 F 8 1.102 E_DG20:DC8_F 19 0.546 -0.099 0.174 -0.179 2.975 1 19 E 21 F 7 -2.798 E_DG21:DC7_F 20 -2.760 -0.252 0.413 -0.217 1.110 1 20 E 22 F 6 4.064 E_DT22:DA6_F 21 -6.076 -0.078 0.386 -0.260 -8.573 1 20 E 23 F 5 0.933 E_DT23:DA5_F 22 -12.005 -0.126 0.811 -0.177 -2.038 1 19 E 24 F 4 1.006 E_DG24:DC4_F 23 -12.505 -0.054 0.225 0.100 0.351 1 19 E 25 F 3 -4.108 E_DC25:DG3_F 24 -6.363 -0.126 0.235 0.050 4.970 1 19 E 26 F 2 -1.056 E_DG26:DC2_F 25 -4.501 -0.003 0.293 -0.080 2.979 38.941 E E 2 3 -9.312 F F 26 25 3.108 -6.168 -1.115 1.354 EE_DA2DA3:DT25DT26_FF 1 -4.973 7.508 38.157 2.734 1.106 3.240 36.599 E E 3 4 1.967 F F 25 24 3.239 1.235 0.384 0.073 EE_DA3DG4:DC24DT25_FF 2 0.022 -0.036 36.579 -0.052 -0.608 3.226 39.001 E E 4 5 -0.343 F F 24 23 3.228 -0.229 -0.057 -0.307 EE_DG4DA5:DT23DC24_FF 3 1.385 -2.075 38.977 -0.432 0.251 3.005 32.729 E E 5 6 1.143 F F 23 22 3.030 0.644 -0.341 -1.160 EE_DA5DT6:DA22DT23_FF 4 0.194 -0.344 32.722 -2.160 0.636 3.336 34.486 E E 6 7 4.581 F F 22 21 3.479 2.710 0.703 -0.804 EE_DT6DT7:DA21DA22_FF 5 -2.977 5.033 34.258 -1.796 -1.668 3.043 36.542 E E 7 8 -3.299 F F 21 20 3.024 -2.065 -0.011 -0.573 EE_DT7DT8:DA20DA21_FF 6 -2.740 4.375 36.386 -0.649 -0.333 3.292 40.926 E E 8 9 -3.019 F F 20 19 3.265 -2.108 -0.173 -1.011 EE_DT8DC9:DG19DA20_FF 7 2.880 -4.123 40.777 -1.215 0.564 3.276 34.677 E E 9 10 10.077 F F 19 18 3.322 5.966 0.769 -0.387 EE_DC9DC10:DG18DG19_FF 8 3.966 -6.699 33.952 -1.582 -0.670 3.181 28.111 E E 10 11 13.647 F F 18 17 3.301 6.568 -0.793 -0.265 EE_DC10DA11:DT17DG18_FF 9 -1.123 2.333 27.325 -2.097 1.367 3.016 33.080 E E 11 12 1.695 F F 17 16 3.012 0.965 -0.041 0.264 EE_DA11DA12:DT16DT17_FF 10 0.905 -1.589 33.055 0.313 0.212 3.225 35.080 E E 12 13 5.853 F F 16 15 3.255 3.522 -0.068 -0.155 EE_DA12DA13:DT15DT16_FF 11 -1.320 2.194 34.884 -0.781 -0.085 3.275 31.949 E E 13 14 0.903 F F 15 14 3.276 0.496 0.300 -0.950 EE_DA13DC14:DG14DT15_FF 12 2.563 -4.661 31.845 -1.817 -0.079 3.556 34.843 E E 14 15 5.855 F F 14 13 3.653 3.497 -0.311 -0.955 EE_DC14DT15:DA13DG14_FF 13 -2.818 4.719 34.562 -2.182 0.046 3.428 41.717 E E 15 16 6.660 F F 13 12 3.426 4.723 0.713 -0.346 EE_DT15DC16:DG12DA13_FF 14 5.100 -7.193 41.159 -1.010 -0.434 3.039 26.930 E E 16 17 15.916 F F 12 11 3.249 7.321 -0.653 -0.279 EE_DC16DT17:DA11DG12_FF 15 0.695 -1.511 25.924 -2.437 1.577 3.652 40.255 E E 17 18 -0.134 F F 11 10 3.616 -0.092 0.776 0.321 EE_DT17DG18:DC10DA11_FF 16 2.230 -3.242 40.195 0.477 -0.846 3.072 27.600 E E 18 19 -1.109 F F 10 9 2.944 -0.527 -1.096 -0.426 EE_DG18DT19:DA9DC10_FF 17 -3.785 7.958 27.339 -0.773 1.446 3.202 33.236 E E 19 20 -0.672 F F 9 8 3.202 -0.384 0.241 -0.631 EE_DT19DG20:DC8DA9_FF 18 -0.787 1.376 33.225 -1.041 -0.551 3.270 34.323 E E 20 21 6.362 F F 8 7 3.351 3.741 -0.324 -0.730 EE_DG20DG21:DC7DC8_FF 19 -3.492 5.938 33.951 -1.833 -0.008 3.072 32.133 E E 21 22 9.693 F F 7 6 3.255 5.335 0.919 -1.269 EE_DG21DT22:DA6DC7_FF 20 2.721 -4.942 31.585 -3.226 -1.185 3.096 35.351 E E 22 23 11.644 F F 6 5 3.326 7.021 0.048 -0.844 EE_DT22DT23:DA5DA6_FF 21 2.609 -4.327 34.573 -2.419 0.303 3.117 36.794 E E 23 24 16.831 F F 5 4 3.003 10.485 -0.721 0.894 EE_DT23DG24:DC4DA5_FF 22 0.820 -1.316 35.309 0.052 1.248 3.151 36.000 E E 24 25 5.168 F F 4 3 3.216 3.189 -0.109 -0.643 EE_DG24DC25:DG3DC4_FF 23 -1.693 2.744 35.825 -1.483 -0.059 3.255 32.946 E E 25 26 4.937 F F 3 2 3.288 2.796 0.237 -0.117 EE_DC25DG26:DC2DG3_FF 24 -1.291 2.280 32.805 -0.684 -0.639 chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2001-03-12 1 1 2008-04-27 1 2 2011-07-13 1 3 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id MOLECULAR INSIGHTS INTO PEBP2/CBF-SMMHC ASSOCIATED ACUTE LEUKEMIA REVEALED FROM THE THREE-DIMENSIONAL STRUCTURE OF PEBP2/CBF BETA CORE BINDING FACTOR BETA IMMUNOGLOBULIN MOTIF DEOXYRIBONUCLEIC ACID- RECOGNITION AND HETERODIMERIZATION FOR THE PEBP2/CBF RUNT-DOMAIN FOLD OF THE CBFA AML1/CBFBETA COMPLEX CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER PDBJ Y RCSB 2001-01-10 REL REL AU GOLD ION HOH water AU1 1 6 AU AU 200 C AU1 2 6 AU AU 200 D AU1 3 6 AU AU 201 D HOH 1 7 HOH HOH 27 E HOH 2 7 HOH HOH 28 E HOH 4 7 HOH HOH 29 E HOH 5 7 HOH HOH 30 E HOH 8 7 HOH HOH 31 E HOH 6 7 HOH HOH 27 F HOH 7 7 HOH HOH 28 F HOH 3 7 HOH HOH 3 B G 1 n 1 DG 1 E A 2 n 2 DA 2 E A 3 n 3 DA 3 E G 4 n 4 DG 4 E A 5 n 5 DA 5 E T 6 n 6 DT 6 E T 7 n 7 DT 7 E T 8 n 8 DT 8 E C 9 n 9 DC 9 E C 10 n 10 DC 10 E A 11 n 11 DA 11 E A 12 n 12 DA 12 E A 13 n 13 DA 13 E C 14 n 14 DC 14 E T 15 n 15 DT 15 E C 16 n 16 DC 16 E T 17 n 17 DT 17 E G 18 n 18 DG 18 E T 19 n 19 DT 19 E G 20 n 20 DG 20 E G 21 n 21 DG 21 E T 22 n 22 DT 22 E T 23 n 23 DT 23 E G 24 n 24 DG 24 E C 25 n 25 DC 25 E G 26 n 26 DG 26 E C 1 n 1 DC 1 F C 2 n 2 DC 2 F G 3 n 3 DG 3 F C 4 n 4 DC 4 F A 5 n 5 DA 5 F A 6 n 6 DA 6 F C 7 n 7 DC 7 F C 8 n 8 DC 8 F A 9 n 9 DA 9 F C 10 n 10 DC 10 F A 11 n 11 DA 11 F G 12 n 12 DG 12 F A 13 n 13 DA 13 F G 14 n 14 DG 14 F T 15 n 15 DT 15 F T 16 n 16 DT 16 F T 17 n 17 DT 17 F G 18 n 18 DG 18 F G 19 n 19 DG 19 F A 20 n 20 DA 20 F A 21 n 21 DA 21 F A 22 n 22 DA 22 F T 23 n 23 DT 23 F C 24 n 24 DC 24 F T 25 n 25 DT 25 F T 26 n 26 DT 26 F n 1 259 A n 2 260 A n 3 261 A n 4 262 A n 5 263 A n 6 264 A n 7 265 A n 8 266 A n 9 267 A n 10 268 A LYS 269 n 11 LYS 269 A HIS 270 n 12 HIS 270 A SER 271 n 13 SER 271 A ASP 272 n 14 ASP 272 A GLU 273 n 15 GLU 273 A TYR 274 n 16 TYR 274 A LYS 275 n 17 LYS 275 A ILE 276 n 18 ILE 276 A ARG 277 n 19 ARG 277 A ARG 278 n 20 ARG 278 A GLU 279 n 21 GLU 279 A ARG 280 n 22 ARG 280 A ASN 281 n 23 ASN 281 A ASN 282 n 24 ASN 282 A ILE 283 n 25 ILE 283 A ALA 284 n 26 ALA 284 A VAL 285 n 27 VAL 285 A ARG 286 n 28 ARG 286 A LYS 287 n 29 LYS 287 A SER 288 n 30 SER 288 A ARG 289 n 31 ARG 289 A ASP 290 n 32 ASP 290 A LYS 291 n 33 LYS 291 A ALA 292 n 34 ALA 292 A LYS 293 n 35 LYS 293 A MET 294 n 36 MET 294 A ARG 295 n 37 ARG 295 A ASN 296 n 38 ASN 296 A LEU 297 n 39 LEU 297 A GLU 298 n 40 GLU 298 A THR 299 n 41 THR 299 A GLN 300 n 42 GLN 300 A HIS 301 n 43 HIS 301 A LYS 302 n 44 LYS 302 A VAL 303 n 45 VAL 303 A LEU 304 n 46 LEU 304 A GLU 305 n 47 GLU 305 A LEU 306 n 48 LEU 306 A THR 307 n 49 THR 307 A ALA 308 n 50 ALA 308 A GLU 309 n 51 GLU 309 A ASN 310 n 52 ASN 310 A GLU 311 n 53 GLU 311 A ARG 312 n 54 ARG 312 A LEU 313 n 55 LEU 313 A GLN 314 n 56 GLN 314 A LYS 315 n 57 LYS 315 A LYS 316 n 58 LYS 316 A VAL 317 n 59 VAL 317 A GLU 318 n 60 GLU 318 A GLN 319 n 61 GLN 319 A LEU 320 n 62 LEU 320 A SER 321 n 63 SER 321 A ARG 322 n 64 ARG 322 A GLU 323 n 65 GLU 323 A LEU 324 n 66 LEU 324 A SER 325 n 67 SER 325 A THR 326 n 68 THR 326 A LEU 327 n 69 LEU 327 A ARG 328 n 70 ARG 328 A ASN 329 n 71 ASN 329 A LEU 330 n 72 LEU 330 A PHE 331 n 73 PHE 331 A n 74 332 A n 75 333 A n 76 334 A n 77 335 A n 78 336 A n 1 259 B n 2 260 B n 3 261 B n 4 262 B n 5 263 B n 6 264 B LYS 265 n 7 LYS 265 B THR 266 n 8 THR 266 B VAL 267 n 9 VAL 267 B ASP 268 n 10 ASP 268 B LYS 269 n 11 LYS 269 B HIS 270 n 12 HIS 270 B SER 271 n 13 SER 271 B ASP 272 n 14 ASP 272 B GLU 273 n 15 GLU 273 B TYR 274 n 16 TYR 274 B LYS 275 n 17 LYS 275 B ILE 276 n 18 ILE 276 B ARG 277 n 19 ARG 277 B ARG 278 n 20 ARG 278 B GLU 279 n 21 GLU 279 B ARG 280 n 22 ARG 280 B ASN 281 n 23 ASN 281 B ASN 282 n 24 ASN 282 B ILE 283 n 25 ILE 283 B ALA 284 n 26 ALA 284 B VAL 285 n 27 VAL 285 B ARG 286 n 28 ARG 286 B LYS 287 n 29 LYS 287 B SER 288 n 30 SER 288 B ARG 289 n 31 ARG 289 B ASP 290 n 32 ASP 290 B LYS 291 n 33 LYS 291 B ALA 292 n 34 ALA 292 B LYS 293 n 35 LYS 293 B MET 294 n 36 MET 294 B ARG 295 n 37 ARG 295 B ASN 296 n 38 ASN 296 B LEU 297 n 39 LEU 297 B GLU 298 n 40 GLU 298 B THR 299 n 41 THR 299 B GLN 300 n 42 GLN 300 B HIS 301 n 43 HIS 301 B LYS 302 n 44 LYS 302 B VAL 303 n 45 VAL 303 B LEU 304 n 46 LEU 304 B GLU 305 n 47 GLU 305 B LEU 306 n 48 LEU 306 B THR 307 n 49 THR 307 B ALA 308 n 50 ALA 308 B GLU 309 n 51 GLU 309 B ASN 310 n 52 ASN 310 B GLU 311 n 53 GLU 311 B ARG 312 n 54 ARG 312 B LEU 313 n 55 LEU 313 B GLN 314 n 56 GLN 314 B LYS 315 n 57 LYS 315 B LYS 316 n 58 LYS 316 B VAL 317 n 59 VAL 317 B GLU 318 n 60 GLU 318 B GLN 319 n 61 GLN 319 B LEU 320 n 62 LEU 320 B SER 321 n 63 SER 321 B ARG 322 n 64 ARG 322 B GLU 323 n 65 GLU 323 B LEU 324 n 66 LEU 324 B SER 325 n 67 SER 325 B THR 326 n 68 THR 326 B LEU 327 n 69 LEU 327 B ARG 328 n 70 ARG 328 B ASN 329 n 71 ASN 329 B LEU 330 n 72 LEU 330 B PHE 331 n 73 PHE 331 B LYS 332 n 74 LYS 332 B GLN 333 n 75 GLN 333 B LEU 334 n 76 LEU 334 B n 77 335 B n 78 336 B GLY 60 n 1 GLY 60 C GLU 61 n 2 GLU 61 C LEU 62 n 3 LEU 62 C VAL 63 n 4 VAL 63 C ARG 64 n 5 ARG 64 C THR 65 n 6 THR 65 C ASP 66 n 7 ASP 66 C SER 67 n 8 SER 67 C PRO 68 n 9 PRO 68 C ASN 69 n 10 ASN 69 C PHE 70 n 11 PHE 70 C LEU 71 n 12 LEU 71 C CYS 72 n 13 CYS 72 C SER 73 n 14 SER 73 C VAL 74 n 15 VAL 74 C LEU 75 n 16 LEU 75 C PRO 76 n 17 PRO 76 C THR 77 n 18 THR 77 C HIS 78 n 19 HIS 78 C TRP 79 n 20 TRP 79 C ARG 80 n 21 ARG 80 C CYS 81 n 22 CYS 81 C ASN 82 n 23 ASN 82 C LYS 83 n 24 LYS 83 C THR 84 n 25 THR 84 C LEU 85 n 26 LEU 85 C PRO 86 n 27 PRO 86 C ILE 87 n 28 ILE 87 C ALA 88 n 29 ALA 88 C PHE 89 n 30 PHE 89 C LYS 90 n 31 LYS 90 C VAL 91 n 32 VAL 91 C VAL 92 n 33 VAL 92 C ALA 93 n 34 ALA 93 C LEU 94 n 35 LEU 94 C GLY 95 n 36 GLY 95 C ASP 96 n 37 ASP 96 C VAL 97 n 38 VAL 97 C PRO 98 n 39 PRO 98 C ASP 99 n 40 ASP 99 C GLY 100 n 41 GLY 100 C THR 101 n 42 THR 101 C LEU 102 n 43 LEU 102 C VAL 103 n 44 VAL 103 C THR 104 n 45 THR 104 C VAL 105 n 46 VAL 105 C MET 106 n 47 MET 106 C ALA 107 n 48 ALA 107 C GLY 108 n 49 GLY 108 C ASN 109 n 50 ASN 109 C ASP 110 n 51 ASP 110 C GLU 111 n 52 GLU 111 C ASN 112 n 53 ASN 112 C TYR 113 n 54 TYR 113 C SER 114 n 55 SER 114 C ALA 115 n 56 ALA 115 C GLU 116 n 57 GLU 116 C LEU 117 n 58 LEU 117 C ARG 118 n 59 ARG 118 C ASN 119 n 60 ASN 119 C ALA 120 n 61 ALA 120 C THR 121 n 62 THR 121 C ALA 122 n 63 ALA 122 C ALA 123 n 64 ALA 123 C MET 124 n 65 MET 124 C LYS 125 n 66 LYS 125 C ASN 126 n 67 ASN 126 C GLN 127 n 68 GLN 127 C VAL 128 n 69 VAL 128 C ALA 129 n 70 ALA 129 C ARG 130 n 71 ARG 130 C PHE 131 n 72 PHE 131 C ASN 132 n 73 ASN 132 C ASP 133 n 74 ASP 133 C LEU 134 n 75 LEU 134 C ARG 135 n 76 ARG 135 C PHE 136 n 77 PHE 136 C VAL 137 n 78 VAL 137 C GLY 138 n 79 GLY 138 C ARG 139 n 80 ARG 139 C SER 140 n 81 SER 140 C GLY 141 n 82 GLY 141 C ARG 142 n 83 ARG 142 C GLY 143 n 84 GLY 143 C LYS 144 n 85 LYS 144 C SER 145 n 86 SER 145 C PHE 146 n 87 PHE 146 C THR 147 n 88 THR 147 C LEU 148 n 89 LEU 148 C THR 149 n 90 THR 149 C ILE 150 n 91 ILE 150 C THR 151 n 92 THR 151 C VAL 152 n 93 VAL 152 C PHE 153 n 94 PHE 153 C THR 154 n 95 THR 154 C ASN 155 n 96 ASN 155 C PRO 156 n 97 PRO 156 C PRO 157 n 98 PRO 157 C GLN 158 n 99 GLN 158 C VAL 159 n 100 VAL 159 C ALA 160 n 101 ALA 160 C THR 161 n 102 THR 161 C TYR 162 n 103 TYR 162 C HIS 163 n 104 HIS 163 C ARG 164 n 105 ARG 164 C ALA 165 n 106 ALA 165 C ILE 166 n 107 ILE 166 C LYS 167 n 108 LYS 167 C ILE 168 n 109 ILE 168 C THR 169 n 110 THR 169 C VAL 170 n 111 VAL 170 C ASP 171 n 112 ASP 171 C GLY 172 n 113 GLY 172 C PRO 173 n 114 PRO 173 C ARG 174 n 115 ARG 174 C GLU 175 n 116 GLU 175 C PRO 176 n 117 PRO 176 C ARG 177 n 118 ARG 177 C ARG 178 n 119 ARG 178 C HIS 179 n 120 HIS 179 C n 121 180 C n 122 181 C n 123 182 C n 1 1 D PRO 2 n 2 PRO 2 D ARG 3 n 3 ARG 3 D VAL 4 n 4 VAL 4 D VAL 5 n 5 VAL 5 D PRO 6 n 6 PRO 6 D ASP 7 n 7 ASP 7 D GLN 8 n 8 GLN 8 D ARG 9 n 9 ARG 9 D SER 10 n 10 SER 10 D LYS 11 n 11 LYS 11 D PHE 12 n 12 PHE 12 D GLU 13 n 13 GLU 13 D ASN 14 n 14 ASN 14 D GLU 15 n 15 GLU 15 D GLU 16 n 16 GLU 16 D PHE 17 n 17 PHE 17 D PHE 18 n 18 PHE 18 D ARG 19 n 19 ARG 19 D LYS 20 n 20 LYS 20 D LEU 21 n 21 LEU 21 D SER 22 n 22 SER 22 D ARG 23 n 23 ARG 23 D GLU 24 n 24 GLU 24 D CYS 25 n 25 CYS 25 D GLU 26 n 26 GLU 26 D ILE 27 n 27 ILE 27 D LYS 28 n 28 LYS 28 D TYR 29 n 29 TYR 29 D THR 30 n 30 THR 30 D GLY 31 n 31 GLY 31 D PHE 32 n 32 PHE 32 D ARG 33 n 33 ARG 33 D ASP 34 n 34 ASP 34 D ARG 35 n 35 ARG 35 D PRO 36 n 36 PRO 36 D HIS 37 n 37 HIS 37 D GLU 38 n 38 GLU 38 D GLU 39 n 39 GLU 39 D ARG 40 n 40 ARG 40 D GLN 41 n 41 GLN 41 D THR 42 n 42 THR 42 D ARG 43 n 43 ARG 43 D PHE 44 n 44 PHE 44 D GLN 45 n 45 GLN 45 D ASN 46 n 46 ASN 46 D ALA 47 n 47 ALA 47 D CYS 48 n 48 CYS 48 D ARG 49 n 49 ARG 49 D ASP 50 n 50 ASP 50 D GLY 51 n 51 GLY 51 D ARG 52 n 52 ARG 52 D SER 53 n 53 SER 53 D GLU 54 n 54 GLU 54 D ILE 55 n 55 ILE 55 D ALA 56 n 56 ALA 56 D PHE 57 n 57 PHE 57 D VAL 58 n 58 VAL 58 D ALA 59 n 59 ALA 59 D THR 60 n 60 THR 60 D GLY 61 n 61 GLY 61 D THR 62 n 62 THR 62 D ASN 63 n 63 ASN 63 D LEU 64 n 64 LEU 64 D SER 65 n 65 SER 65 D LEU 66 n 66 LEU 66 D GLN 67 n 67 GLN 67 D PHE 68 n 68 PHE 68 D PHE 69 n 69 PHE 69 D PRO 70 n 70 PRO 70 D n 71 71 D n 72 72 D n 73 73 D n 74 74 D n 75 75 D n 76 76 D n 77 77 D n 78 78 D n 79 79 D n 80 80 D n 81 81 D SER 82 n 82 SER 82 D ARG 83 n 83 ARG 83 D GLU 84 n 84 GLU 84 D TYR 85 n 85 TYR 85 D VAL 86 n 86 VAL 86 D ASP 87 n 87 ASP 87 D LEU 88 n 88 LEU 88 D GLU 89 n 89 GLU 89 D ARG 90 n 90 ARG 90 D GLU 91 n 91 GLU 91 D ALA 92 n 92 ALA 92 D GLY 93 n 93 GLY 93 D LYS 94 n 94 LYS 94 D VAL 95 n 95 VAL 95 D TYR 96 n 96 TYR 96 D LEU 97 n 97 LEU 97 D LYS 98 n 98 LYS 98 D ALA 99 n 99 ALA 99 D PRO 100 n 100 PRO 100 D MET 101 n 101 MET 101 D ILE 102 n 102 ILE 102 D LEU 103 n 103 LEU 103 D ASN 104 n 104 ASN 104 D GLY 105 n 105 GLY 105 D VAL 106 n 106 VAL 106 D CYS 107 n 107 CYS 107 D VAL 108 n 108 VAL 108 D ILE 109 n 109 ILE 109 D TRP 110 n 110 TRP 110 D LYS 111 n 111 LYS 111 D GLY 112 n 112 GLY 112 D TRP 113 n 113 TRP 113 D ILE 114 n 114 ILE 114 D ASP 115 n 115 ASP 115 D LEU 116 n 116 LEU 116 D HIS 117 n 117 HIS 117 D ARG 118 n 118 ARG 118 D LEU 119 n 119 LEU 119 D ASP 120 n 120 ASP 120 D GLY 121 n 121 GLY 121 D MET 122 n 122 MET 122 D GLY 123 n 123 GLY 123 D CYS 124 n 124 CYS 124 D LEU 125 n 125 LEU 125 D GLU 126 n 126 GLU 126 D PHE 127 n 127 PHE 127 D ASP 128 n 128 ASP 128 D GLU 129 n 129 GLU 129 D GLU 130 n 130 GLU 130 D ARG 131 n 131 ARG 131 D ALA 132 n 132 ALA 132 D GLN 133 n 133 GLN 133 D GLN 134 n 134 GLN 134 D GLU 135 n 135 GLU 135 D ASP 136 n 136 ASP 136 D ALA 137 n 137 ALA 137 D LEU 138 n 138 LEU 138 D ALA 139 n 139 ALA 139 D GLN 140 n 140 GLN 140 D n 141 141 D author_defined_assembly 6 hexameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 D N LEU 66 F N LEU 66 D O SER 53 F O SER 53 D O ALA 56 F O ALA 56 D N LYS 28 F N LYS 28 D O ILE 27 F O ILE 27 D N GLY 121 F N GLY 121 D N GLU 126 F N GLU 126 D O ILE 109 F O ILE 109 D O ILE 114 F O ILE 114 D N VAL 95 F N VAL 95 D O ILE 102 F O ILE 102 C N VAL 159 E N VAL 100 C O TYR 162 E O TYR 103 C N LEU 148 E N LEU 89 C N THR 151 E N THR 92 C O THR 104 E O THR 45 C O VAL 103 E O VAL 44 C N ALA 122 E N ALA 63 C N LYS 125 E N LYS 66 C O VAL 128 E O VAL 69 C N ALA 129 E N ALA 70 C O VAL 91 E O VAL 32 C N VAL 92 E N VAL 33 C O LEU 71 E O LEU 12 C O CYS 72 E O CYS 13 C N VAL 63 E N VAL 4 D N LEU 66 F N LEU 66 D O SER 53 F O SER 53 D O ALA 56 F O ALA 56 D N LYS 28 F N LYS 28 D O ILE 27 F O ILE 27 D N GLY 121 F N GLY 121 D N GLU 126 F N GLU 126 D O ILE 109 F O ILE 109 D O ILE 114 F O ILE 114 D N VAL 95 F N VAL 95 D O TYR 96 F O TYR 96 D N ASP 87 F N ASP 87 C N TRP 79 E N TRP 20 C O LYS 167 E O LYS 108 C N ARG 118 E N ARG 59 C O ARG 135 E O ARG 76 1 A VAL 259 C VAL 1 1 Y 1 A LYS 260 C LYS 2 1 Y 1 A SER 261 C SER 3 1 Y 1 A LYS 262 C LYS 4 1 Y 1 A ALA 263 C ALA 5 1 Y 1 A LYS 264 C LYS 6 1 Y 1 A LYS 265 C LYS 7 1 Y 1 A THR 266 C THR 8 1 Y 1 A VAL 267 C VAL 9 1 Y 1 A ASP 268 C ASP 10 1 Y 1 A LYS 332 C LYS 74 1 Y 1 A GLN 333 C GLN 75 1 Y 1 A LEU 334 C LEU 76 1 Y 1 A PRO 335 C PRO 77 1 Y 1 A GLU 336 C GLU 78 1 Y 1 B VAL 259 D VAL 1 1 Y 1 B LYS 260 D LYS 2 1 Y 1 B SER 261 D SER 3 1 Y 1 B LYS 262 D LYS 4 1 Y 1 B ALA 263 D ALA 5 1 Y 1 B LYS 264 D LYS 6 1 Y 1 B PRO 335 D PRO 77 1 Y 1 B GLU 336 D GLU 78 1 Y 1 C ARG 180 E ARG 121 1 Y 1 C GLN 181 E GLN 122 1 Y 1 C LYS 182 E LYS 123 1 Y 1 D MET 1 F MET 1 1 Y 1 D ALA 71 F ALA 71 1 Y 1 D SER 72 F SER 72 1 Y 1 D TRP 73 F TRP 73 1 Y 1 D GLN 74 F GLN 74 1 Y 1 D GLY 75 F GLY 75 1 Y 1 D GLU 76 F GLU 76 1 Y 1 D GLN 77 F GLN 77 1 Y 1 D ARG 78 F ARG 78 1 Y 1 D GLN 79 F GLN 79 1 Y 1 D THR 80 F THR 80 1 Y 1 D PRO 81 F PRO 81 1 Y 1 D GLN 141 F GLN 141 1 Y 1 C C O NE2 GLY GLN 95 127 2.12 1 F DA 6 0.064 SIDE CHAIN 1 F DC 7 0.065 SIDE CHAIN 1 F DG 18 0.052 SIDE CHAIN 1 A SER 271 -40.51 155.25 1 A ILE 276 -96.66 -62.17 1 B LYS 269 -66.84 1.95 1 B SER 271 -50.14 -176.99 1 C PRO 68 -63.77 2.20 1 C ASN 82 53.72 9.80 1 C ASN 109 171.42 137.95 1 C ASN 119 62.75 61.17 1 C ASP 133 66.54 60.32 1 C ARG 164 28.26 67.80 1 D ARG 9 -32.89 -84.67 1 D GLU 15 -46.62 106.83 1 D GLU 24 -27.28 139.99 1 D HIS 37 -23.30 -49.80 1 D GLU 38 -41.99 -75.39 1 D PHE 57 -68.41 98.68 1 D ALA 59 -57.16 -77.28 1 D GLU 89 104.10 -22.46 1 D LEU 116 -62.31 2.43 1 D PHE 127 -59.20 100.14 PROTEIN_REP.PARAM PROTEIN.TOP DNA-RNA_REP.PARAM DNA-RNA.TOP WATER_REP.PARAM WATER.TOP 82.1 29.96 0.00 0.00 -15.30 0.00 -14.66 0.2990000 0.009 0.2470000 3.00 19.95 1038 21111 21111 4.9 95.8 RANDOM 461658.95 0.00000 1 RESTRAINED THROUGHOUT 0 0 MAD Engh & Huber FLAT MODEL 25 0.198 0.57 0.45 20.00 0.64 0.64 3.00 19.95 8 4197 3 1060 3126 0.007 1.3 21.2 1.10 14.09 1.50 18.80 2.00 20.26 2.00 23.66 2.50 0.4640000 0.038 0.4470000 3.19 150 3090 6 4.6 88.9 45.1 3.000 20.000 1IO4 66989 21113 0.000 0.000 0.0620000 6.2000000 1 15.5000 3.173 97.1 0.3720000 3.00 3.05 1.700 37.2000000 3.246 90.8 refinement CNS 0.9 data reduction DENZO data scaling SCALEPACK phasing CNS 0.9 CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER 1 N N 2 N N 3 N N 3 N N 4 N N 5 N N 6 N N 6 N N 6 N N 7 N N 7 N N 7 N N A SER 271 C SER 13 HELX_P A LEU 330 C LEU 72 1 1 60 B ASP 272 D ASP 14 HELX_P B LEU 334 D LEU 76 1 2 63 D ASP 7 F ASP 7 HELX_P D GLU 15 F GLU 15 1 3 9 D GLU 15 F GLU 15 HELX_P D ARG 23 F ARG 23 1 4 9 D PRO 36 F PRO 36 HELX_P D GLY 51 F GLY 51 1 5 16 D ASP 128 F ASP 128 HELX_P D ALA 139 F ALA 139 1 6 12 hydrog WATSON-CRICK E DA 2 A N1 DA 2 1_555 F DT 26 B N3 DT 26 1_555 hydrog WATSON-CRICK E DA 2 A N6 DA 2 1_555 F DT 26 B O4 DT 26 1_555 hydrog WATSON-CRICK E DA 3 A N1 DA 3 1_555 F DT 25 B N3 DT 25 1_555 hydrog WATSON-CRICK E DA 3 A N6 DA 3 1_555 F DT 25 B O4 DT 25 1_555 hydrog WATSON-CRICK E DG 4 A N1 DG 4 1_555 F DC 24 B N3 DC 24 1_555 hydrog WATSON-CRICK E DG 4 A N2 DG 4 1_555 F DC 24 B O2 DC 24 1_555 hydrog WATSON-CRICK E DG 4 A O6 DG 4 1_555 F DC 24 B N4 DC 24 1_555 hydrog WATSON-CRICK E DA 5 A N1 DA 5 1_555 F DT 23 B N3 DT 23 1_555 hydrog WATSON-CRICK E DA 5 A N6 DA 5 1_555 F DT 23 B O4 DT 23 1_555 hydrog WATSON-CRICK E DT 6 A N3 DT 6 1_555 F DA 22 B N1 DA 22 1_555 hydrog WATSON-CRICK E DT 6 A O4 DT 6 1_555 F DA 22 B N6 DA 22 1_555 hydrog DT-DA PAIR E DT 7 A O4 DT 7 1_555 F DA 20 B N6 DA 20 1_555 hydrog WATSON-CRICK E DT 7 A N3 DT 7 1_555 F DA 21 B N1 DA 21 1_555 hydrog WATSON-CRICK E DT 7 A O4 DT 7 1_555 F DA 21 B N6 DA 21 1_555 hydrog WATSON-CRICK E DT 8 A N3 DT 8 1_555 F DA 20 B N1 DA 20 1_555 hydrog WATSON-CRICK E DT 8 A O4 DT 8 1_555 F DA 20 B N6 DA 20 1_555 hydrog WATSON-CRICK E DC 9 A N3 DC 9 1_555 F DG 19 B N1 DG 19 1_555 hydrog WATSON-CRICK E DC 9 A N4 DC 9 1_555 F DG 19 B O6 DG 19 1_555 hydrog WATSON-CRICK E DC 9 A O2 DC 9 1_555 F DG 19 B N2 DG 19 1_555 hydrog WATSON-CRICK E DC 10 A N3 DC 10 1_555 F DG 18 B N1 DG 18 1_555 hydrog WATSON-CRICK E DC 10 A N4 DC 10 1_555 F DG 18 B O6 DG 18 1_555 hydrog WATSON-CRICK E DC 10 A O2 DC 10 1_555 F DG 18 B N2 DG 18 1_555 hydrog WATSON-CRICK E DA 11 A N1 DA 11 1_555 F DT 17 B N3 DT 17 1_555 hydrog WATSON-CRICK E DA 11 A N6 DA 11 1_555 F DT 17 B O4 DT 17 1_555 hydrog WATSON-CRICK E DA 12 A N1 DA 12 1_555 F DT 16 B N3 DT 16 1_555 hydrog WATSON-CRICK E DA 12 A N6 DA 12 1_555 F DT 16 B O4 DT 16 1_555 hydrog WATSON-CRICK E DA 13 A N1 DA 13 1_555 F DT 15 B N3 DT 15 1_555 hydrog WATSON-CRICK E DA 13 A N6 DA 13 1_555 F DT 15 B O4 DT 15 1_555 hydrog WATSON-CRICK E DC 14 A N3 DC 14 1_555 F DG 14 B N1 DG 14 1_555 hydrog WATSON-CRICK E DC 14 A N4 DC 14 1_555 F DG 14 B O6 DG 14 1_555 hydrog WATSON-CRICK E DC 14 A O2 DC 14 1_555 F DG 14 B N2 DG 14 1_555 hydrog WATSON-CRICK E DT 15 A N3 DT 15 1_555 F DA 13 B N1 DA 13 1_555 hydrog WATSON-CRICK E DT 15 A O4 DT 15 1_555 F DA 13 B N6 DA 13 1_555 hydrog WATSON-CRICK E DC 16 A N3 DC 16 1_555 F DG 12 B N1 DG 12 1_555 hydrog WATSON-CRICK E DC 16 A N4 DC 16 1_555 F DG 12 B O6 DG 12 1_555 hydrog WATSON-CRICK E DC 16 A O2 DC 16 1_555 F DG 12 B N2 DG 12 1_555 hydrog WATSON-CRICK E DT 17 A N3 DT 17 1_555 F DA 11 B N1 DA 11 1_555 hydrog WATSON-CRICK E DT 17 A O4 DT 17 1_555 F DA 11 B N6 DA 11 1_555 hydrog WATSON-CRICK E DG 18 A N1 DG 18 1_555 F DC 10 B N3 DC 10 1_555 hydrog WATSON-CRICK E DG 18 A N2 DG 18 1_555 F DC 10 B O2 DC 10 1_555 hydrog WATSON-CRICK E DG 18 A O6 DG 18 1_555 F DC 10 B N4 DC 10 1_555 hydrog WATSON-CRICK E DT 19 A N3 DT 19 1_555 F DA 9 B N1 DA 9 1_555 hydrog WATSON-CRICK E DT 19 A O4 DT 19 1_555 F DA 9 B N6 DA 9 1_555 hydrog WATSON-CRICK E DG 20 A N1 DG 20 1_555 F DC 8 B N3 DC 8 1_555 hydrog WATSON-CRICK E DG 20 A N2 DG 20 1_555 F DC 8 B O2 DC 8 1_555 hydrog WATSON-CRICK E DG 20 A O6 DG 20 1_555 F DC 8 B N4 DC 8 1_555 hydrog WATSON-CRICK E DG 21 A N1 DG 21 1_555 F DC 7 B N3 DC 7 1_555 hydrog WATSON-CRICK E DG 21 A N2 DG 21 1_555 F DC 7 B O2 DC 7 1_555 hydrog WATSON-CRICK E DG 21 A O6 DG 21 1_555 F DC 7 B N4 DC 7 1_555 hydrog WATSON-CRICK E DT 22 A N3 DT 22 1_555 F DA 6 B N1 DA 6 1_555 hydrog WATSON-CRICK E DT 22 A O4 DT 22 1_555 F DA 6 B N6 DA 6 1_555 hydrog WATSON-CRICK E DT 23 A N3 DT 23 1_555 F DA 5 B N1 DA 5 1_555 hydrog WATSON-CRICK E DT 23 A O4 DT 23 1_555 F DA 5 B N6 DA 5 1_555 hydrog WATSON-CRICK E DG 24 A N1 DG 24 1_555 F DC 4 B N3 DC 4 1_555 hydrog WATSON-CRICK E DG 24 A N2 DG 24 1_555 F DC 4 B O2 DC 4 1_555 hydrog WATSON-CRICK E DG 24 A O6 DG 24 1_555 F DC 4 B N4 DC 4 1_555 hydrog WATSON-CRICK E DC 25 A N3 DC 25 1_555 F DG 3 B N1 DG 3 1_555 hydrog WATSON-CRICK E DC 25 A N4 DC 25 1_555 F DG 3 B O6 DG 3 1_555 hydrog WATSON-CRICK E DC 25 A O2 DC 25 1_555 F DG 3 B N2 DG 3 1_555 hydrog WATSON-CRICK E DG 26 A N1 DG 26 1_555 F DC 2 B N3 DC 2 1_555 hydrog WATSON-CRICK E DG 26 A N2 DG 26 1_555 F DC 2 B O2 DC 2 1_555 hydrog WATSON-CRICK E DG 26 A O6 DG 26 1_555 F DC 2 B N4 DC 2 1_555 TRANSCRIPTION/DNA PROTEIN-DNA COMPLEX, TRANSCRIPTION FACTOR, BZIP, RUNX, RUNT, C/EBP, CBF, CORE BINDING FACTOR, AML1, AML, TRANSCRIPTION-DNA COMPLEX C ASN 155 E ASN 96 1 C PRO 156 E PRO 97 0.01 CEBPB_HUMAN UNP 3 259 P17676 VKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPE RUNX1_MOUSE UNP 4 60 Q03347 GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGR SGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQK PEBB_MOUSE UNP 5 1 Q08024 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNACRDGRSEIAFVATGTNLSLQFFPASWQGEQRQT PSREYVDLEREAGKVYLKAPMILNGVCVIWKGWIDLHRLDGMGCLEFDEERAQQEDALAQQ 1IO4 PDB 1 1IO4 1IO4 PDB 2 1IO4 259 336 1IO4 259 336 P17676 A 1 1 78 259 336 1IO4 259 336 P17676 B 1 1 78 60 182 1IO4 60 182 Q03347 C 2 1 123 1 141 1IO4 1 141 Q08024 D 3 1 141 1 26 1IO4 1 26 1IO4 E 4 1 26 1 26 1IO4 1 26 1IO4 F 5 1 26 14 7 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel D ASN 63 F ASN 63 D GLN 67 F GLN 67 D ARG 52 F ARG 52 D PHE 57 F PHE 57 D CYS 25 F CYS 25 D TYR 29 F TYR 29 D ASP 120 F ASP 120 D GLU 126 F GLU 126 D CYS 107 F CYS 107 D ASP 115 F ASP 115 D VAL 95 F VAL 95 D LEU 103 F LEU 103 C GLN 158 E GLN 99 C TYR 162 E TYR 103 C THR 147 E THR 88 C VAL 152 E VAL 93 C LEU 102 E LEU 43 C GLY 108 E GLY 49 C THR 121 E THR 62 C LYS 125 E LYS 66 C VAL 128 E VAL 69 C ARG 130 E ARG 71 C LYS 90 E LYS 31 C ALA 93 E ALA 34 C PHE 70 E PHE 11 C SER 73 E SER 14 C LEU 62 E LEU 3 C ARG 64 E ARG 5 D ASN 63 F ASN 63 D GLN 67 F GLN 67 D ARG 52 F ARG 52 D PHE 57 F PHE 57 D CYS 25 F CYS 25 D TYR 29 F TYR 29 D ASP 120 F ASP 120 D GLU 126 F GLU 126 D CYS 107 F CYS 107 D ASP 115 F ASP 115 D VAL 95 F VAL 95 D LEU 103 F LEU 103 D VAL 86 F VAL 86 D ASP 87 F ASP 87 C HIS 78 E HIS 19 C ARG 80 E ARG 21 C LYS 167 E LYS 108 C THR 169 E THR 110 C LEU 117 E LEU 58 C ARG 118 E ARG 59 C ARG 135 E ARG 76 C PHE 136 E PHE 77 BINDING SITE FOR RESIDUE AU C 200 C AU 200 Software 1 BINDING SITE FOR RESIDUE AU D 200 D AU 200 Software 2 BINDING SITE FOR RESIDUE AU D 201 D AU 201 Software 2 C CYS 81 E CYS 22 1 1_555 D GLU 24 F GLU 24 2 1_555 D CYS 124 F CYS 124 2 1_555 D GLN 45 F GLN 45 2 1_555 D CYS 48 F CYS 48 2 1_555 20 C 2 2 21