0.013755 0.000000 0.000000 0.000000 0.012793 0.000000 0.000000 0.000000 0.017844 0.00000 0.00000 0.00000 Shiromizu, I. Matsusue, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 72.700 78.170 56.040 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking C27 H29 Cl N4 O5 S 557.061 (-)-7-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]TETRAHYDRO-8A-(METHOXYMETHYL)-1'-(4-PYRIDINYL)-SPIRO[5H-OXAZOLO[3,2-A]PYRAZINE-2(3H),4'-PIPERIDIN]-5-ONE non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CA N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N N N 90 S C N 91 N C N 92 N O N 93 N C N 94 N C N 95 N C N 96 N O N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N N N 110 S C N 111 N C N 112 N O N 113 N C N 114 N C N 115 N C N 116 N O N 117 N O N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N N N 129 N C N 130 N C N 131 N O N 132 N O N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N N N 139 S C N 140 N C N 141 N O N 142 N C Y 143 N C Y 144 N N Y 145 N C Y 146 N C Y 147 N N N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N N N 160 S C N 161 N C N 162 N O N 163 S C N 164 N C N 165 N C N 166 N C N 167 N O N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N N N 182 S C N 183 N C N 184 N O N 185 N C N 186 N C N 187 N C N 188 N C N 189 N O N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N N N 204 S C N 205 N C N 206 N O N 207 N C N 208 N C N 209 N C N 210 N C N 211 N N N 212 N O N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N N N 229 S C N 230 N C N 231 N O N 232 N C N 233 N C N 234 N S N 235 N C N 236 N O N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N N N 249 S C N 250 N C N 251 N O N 252 N C Y 253 N C Y 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 S C N 273 N C N 274 N O N 275 N C N 276 N C N 277 N C N 278 N O N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N N N 289 S C N 290 N C N 291 N O N 292 N C N 293 N O N 294 N O N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N N N 303 S C N 304 N C N 305 N O N 306 R C N 307 N O N 308 N C N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N N N 320 S C N 321 N C N 322 N O N 323 N C Y 324 N C Y 325 N C Y 326 N C Y 327 N N Y 328 N C Y 329 N C Y 330 N C Y 331 N C Y 332 N C N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N N N 347 S C N 348 N C N 349 N O N 350 N C Y 351 N C Y 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C N 357 N O N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N N N 371 S C N 372 N C N 373 N O N 374 N C N 375 N C N 376 N C N 377 N O N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H Y 389 N C Y 390 N C Y 391 N C Y 392 N C Y 393 N C Y 394 N C N 395 N CL Y 396 N C Y 397 N C Y 398 N C Y 399 N C N 400 N S N 401 N O N 402 N O N 403 N C N 404 N O N 405 N C N 406 N N N 407 S C N 408 N C N 409 N O N 410 N C N 411 N C N 412 N N N 413 N C Y 414 N C N 415 N N Y 416 N C Y 417 N C N 418 N C Y 419 N C N 420 N C N 421 N C N 422 N O N 423 N C Y 424 N N Y 425 N C N 426 N C N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing Y 246 N doub Y 247 N sing Y 248 N sing N 249 N sing Y 250 N doub N 251 N sing Y 252 N doub N 253 N sing Y 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing Y 315 N doub Y 316 N sing Y 317 N sing N 318 N sing Y 319 N doub Y 320 N sing Y 321 N sing N 322 N sing Y 323 N sing Y 324 N doub N 325 N sing Y 326 N doub N 327 N sing Y 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing Y 343 N doub Y 344 N sing Y 345 N sing N 346 N sing Y 347 N doub N 348 N sing Y 349 N doub N 350 N sing Y 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing Y 374 N doub Y 375 N sing N 376 N sing Y 377 N sing N 378 N sing Y 379 N sing Y 380 N doub Y 381 N sing Y 382 N doub N 383 N sing N 384 N sing Y 385 N sing N 386 N sing Y 387 N doub N 388 N sing Y 389 N doub N 390 N sing Y 391 N sing N 392 N sing N 393 N doub N 394 N doub N 395 N sing N 396 N doub N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing Y 420 N doub Y 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing Y 426 N sing Y 427 N doub N 428 N sing N 429 N sing N 430 N sing N 431 N sing Y 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing Y 442 N doub N 443 N sing N 444 N sing N 445 N sing To be Published 0353 Factor Xa Specific Inhibitor That Induces the Novel Binding Model In Complex With Human FXa UK J.Mol.Biol. JMOBAK 0070 0022-2836 232 947 966 10.1006/jmbi.1993.1441 Structure of human des(1-45) factor Xa at 2.2 A resolution 1993 US J.Biol.Chem. JBCHA3 0071 0021-9258 271 29988 29992 10.1074/jbc.271.47.29988 X-ray structure of active site-inhibited clotting factor Xa. Implications for drug design and substrate recognition 1996 US J.Biol.Chem. JBCHA3 0071 0021-9258 271 16614 16620 10.1074/jbc.271.28.16614 Autoproteolysis or plasmin-mediated cleavage of factor Xaalpha exposes a plasminogen binding site and inhibits coagulation 1996 10.2210/pdb1ioe/pdb pdb_00001ioe 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 MIRRORS IMAGE PLATE 1998-12-18 RIGAKU RAXIS IV YALE MIRRORS SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 1.5418 ROTATING ANODE RIGAKU 26604.297 COAGULATION FACTOR XA 3.4.21.6 HEAVY CHAIN, CATALYTIC DOMAIN (RESIDUES 235-469) 1 nat polymer 10533.713 COAGULATION FACTOR XA 3.4.21.6 LIGHT CHAIN, EPIDERMAL GROWTH FACTOR LIKE DOMAIN (RESIDUES 84-179) 1 nat polymer 40.078 CALCIUM ION 1 syn non-polymer 557.061 (-)-7-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]TETRAHYDRO-8A-(METHOXYMETHYL)-1'-(4-PYRIDINYL)-SPIRO[5H-OXAZOLO[3,2-A]PYRAZINE-2(3H),4'-PIPERIDIN]-5-ONE 1 syn non-polymer no no IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTR IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTR A polypeptide(L) no no YKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKA CIPTGPYPCGKQTLER YKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKA CIPTGPYPCGKQTLER L polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample 9606 Homo sapiens human Homo sample 9606 Homo sapiens 1 2.14 42.61 VAPOR DIFFUSION, SITTING DROP 7.20 PEG1500, CALCIUM CHLORIDE, M55532,TRIS-HCL, pH 7.20, VAPOR DIFFUSION, SITTING DROP, temperature 293.0K 293.0 software chem_comp_atom chem_comp_bond database_2 struct_sheet struct_site repository Initial release Version format compliance Derived calculations Version format compliance Refinement description Data collection Database references Derived calculations 1 0 2003-09-23 1 1 2007-11-21 1 2 2011-07-13 1 3 2017-10-04 1 4 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_sheet.number_strands _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y PDBJ 2001-03-08 REL CA CALCIUM ION XMA (-)-7-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]TETRAHYDRO-8A-(METHOXYMETHYL)-1'-(4-PYRIDINYL)-SPIRO[5H-OXAZOLO[3,2-A]PYRAZINE-2(3H),4'-PIPERIDIN]-5-ONE CA 301 3 CA CA 301 A XMA 401 4 XMA XMA 401 A ILE 16 n 1 ILE 16 A VAL 17 n 2 VAL 17 A GLY 18 n 3 GLY 18 A GLY 19 n 4 GLY 19 A GLN 20 n 5 GLN 20 A GLU 21 n 6 GLU 21 A CYS 22 n 7 CYS 22 A LYS 23 n 8 LYS 23 A ASP 24 n 9 ASP 24 A GLY 25 n 10 GLY 25 A GLU 26 n 11 GLU 26 A CYS 27 n 12 CYS 27 A PRO 28 n 13 PRO 28 A TRP 29 n 14 TRP 29 A GLN 30 n 15 GLN 30 A ALA 31 n 16 ALA 31 A LEU 32 n 17 LEU 32 A LEU 33 n 18 LEU 33 A ILE 34 n 19 ILE 34 A ASN 35 n 20 ASN 35 A GLU 36 n 21 GLU 36 A GLU 37 n 22 GLU 37 A ASN 38 n 23 ASN 38 A GLU 39 n 24 GLU 39 A GLY 40 n 25 GLY 40 A PHE 41 n 26 PHE 41 A CYS 42 n 27 CYS 42 A GLY 43 n 28 GLY 43 A GLY 44 n 29 GLY 44 A THR 45 n 30 THR 45 A ILE 46 n 31 ILE 46 A LEU 47 n 32 LEU 47 A SER 48 n 33 SER 48 A GLU 49 n 34 GLU 49 A PHE 50 n 35 PHE 50 A TYR 51 n 36 TYR 51 A ILE 52 n 37 ILE 52 A LEU 53 n 38 LEU 53 A THR 54 n 39 THR 54 A ALA 55 n 40 ALA 55 A ALA 56 n 41 ALA 56 A HIS 57 n 42 HIS 57 A CYS 58 n 43 CYS 58 A LEU 59 n 44 LEU 59 A TYR 60 n 45 TYR 60 A GLN 61 n 46 GLN 61 A ALA 61 n 47 A ALA 61 A LYS 62 n 48 LYS 62 A ARG 63 n 49 ARG 63 A PHE 64 n 50 PHE 64 A LYS 65 n 51 LYS 65 A VAL 66 n 52 VAL 66 A ARG 67 n 53 ARG 67 A VAL 68 n 54 VAL 68 A GLY 69 n 55 GLY 69 A ASP 70 n 56 ASP 70 A ARG 71 n 57 ARG 71 A ASN 72 n 58 ASN 72 A THR 73 n 59 THR 73 A GLU 74 n 60 GLU 74 A GLN 75 n 61 GLN 75 A GLU 76 n 62 GLU 76 A GLU 77 n 63 GLU 77 A GLY 78 n 64 GLY 78 A GLY 79 n 65 GLY 79 A GLU 80 n 66 GLU 80 A ALA 81 n 67 ALA 81 A VAL 82 n 68 VAL 82 A HIS 83 n 69 HIS 83 A GLU 84 n 70 GLU 84 A VAL 85 n 71 VAL 85 A GLU 86 n 72 GLU 86 A VAL 87 n 73 VAL 87 A VAL 88 n 74 VAL 88 A ILE 89 n 75 ILE 89 A LYS 90 n 76 LYS 90 A HIS 91 n 77 HIS 91 A ASN 92 n 78 ASN 92 A ARG 93 n 79 ARG 93 A PHE 94 n 80 PHE 94 A THR 95 n 81 THR 95 A LYS 96 n 82 LYS 96 A GLU 97 n 83 GLU 97 A THR 98 n 84 THR 98 A TYR 99 n 85 TYR 99 A ASP 100 n 86 ASP 100 A PHE 101 n 87 PHE 101 A ASP 102 n 88 ASP 102 A ILE 103 n 89 ILE 103 A ALA 104 n 90 ALA 104 A VAL 105 n 91 VAL 105 A LEU 106 n 92 LEU 106 A ARG 107 n 93 ARG 107 A LEU 108 n 94 LEU 108 A LYS 109 n 95 LYS 109 A THR 110 n 96 THR 110 A PRO 111 n 97 PRO 111 A ILE 112 n 98 ILE 112 A THR 113 n 99 THR 113 A PHE 114 n 100 PHE 114 A ARG 115 n 101 ARG 115 A MET 116 n 102 MET 116 A ASN 117 n 103 ASN 117 A VAL 118 n 104 VAL 118 A ALA 119 n 105 ALA 119 A PRO 120 n 106 PRO 120 A ALA 121 n 107 ALA 121 A CYS 122 n 108 CYS 122 A LEU 123 n 109 LEU 123 A PRO 124 n 110 PRO 124 A GLU 124 n 111 A GLU 124 A ARG 125 n 112 ARG 125 A ASP 126 n 113 ASP 126 A TRP 127 n 114 TRP 127 A ALA 128 n 115 ALA 128 A GLU 129 n 116 GLU 129 A SER 130 n 117 SER 130 A THR 131 n 118 THR 131 A LEU 131 n 119 A LEU 131 A MET 131 n 120 B MET 131 A THR 132 n 121 THR 132 A GLN 133 n 122 GLN 133 A LYS 134 n 123 LYS 134 A THR 135 n 124 THR 135 A GLY 136 n 125 GLY 136 A ILE 137 n 126 ILE 137 A VAL 138 n 127 VAL 138 A SER 139 n 128 SER 139 A GLY 140 n 129 GLY 140 A PHE 141 n 130 PHE 141 A GLY 142 n 131 GLY 142 A ARG 143 n 132 ARG 143 A THR 144 n 133 THR 144 A HIS 145 n 134 HIS 145 A GLU 147 n 135 GLU 147 A LYS 148 n 136 LYS 148 A GLY 149 n 137 GLY 149 A ARG 150 n 138 ARG 150 A GLN 151 n 139 GLN 151 A SER 152 n 140 SER 152 A THR 153 n 141 THR 153 A ARG 154 n 142 ARG 154 A LEU 155 n 143 LEU 155 A LYS 156 n 144 LYS 156 A MET 157 n 145 MET 157 A LEU 158 n 146 LEU 158 A GLU 159 n 147 GLU 159 A VAL 160 n 148 VAL 160 A PRO 161 n 149 PRO 161 A TYR 162 n 150 TYR 162 A VAL 163 n 151 VAL 163 A ASP 164 n 152 ASP 164 A ARG 165 n 153 ARG 165 A ASN 166 n 154 ASN 166 A SER 167 n 155 SER 167 A CYS 168 n 156 CYS 168 A LYS 169 n 157 LYS 169 A LEU 170 n 158 LEU 170 A SER 171 n 159 SER 171 A SER 172 n 160 SER 172 A SER 173 n 161 SER 173 A PHE 174 n 162 PHE 174 A ILE 175 n 163 ILE 175 A ILE 176 n 164 ILE 176 A THR 177 n 165 THR 177 A GLN 178 n 166 GLN 178 A ASN 179 n 167 ASN 179 A MET 180 n 168 MET 180 A PHE 181 n 169 PHE 181 A CYS 182 n 170 CYS 182 A ALA 183 n 171 ALA 183 A GLY 184 n 172 GLY 184 A TYR 185 n 173 TYR 185 A ASP 185 n 174 A ASP 185 A THR 185 n 175 B THR 185 A LYS 186 n 176 LYS 186 A GLN 187 n 177 GLN 187 A GLU 188 n 178 GLU 188 A ASP 189 n 179 ASP 189 A ALA 190 n 180 ALA 190 A CYS 191 n 181 CYS 191 A GLN 192 n 182 GLN 192 A GLY 193 n 183 GLY 193 A ASP 194 n 184 ASP 194 A SER 195 n 185 SER 195 A GLY 196 n 186 GLY 196 A GLY 197 n 187 GLY 197 A PRO 198 n 188 PRO 198 A HIS 199 n 189 HIS 199 A VAL 200 n 190 VAL 200 A THR 201 n 191 THR 201 A ARG 202 n 192 ARG 202 A PHE 203 n 193 PHE 203 A LYS 204 n 194 LYS 204 A ASP 205 n 195 ASP 205 A THR 206 n 196 THR 206 A TYR 207 n 197 TYR 207 A PHE 208 n 198 PHE 208 A VAL 209 n 199 VAL 209 A THR 210 n 200 THR 210 A GLY 211 n 201 GLY 211 A ILE 212 n 202 ILE 212 A VAL 213 n 203 VAL 213 A SER 214 n 204 SER 214 A TRP 215 n 205 TRP 215 A GLY 216 n 206 GLY 216 A GLU 217 n 207 GLU 217 A GLY 218 n 208 GLY 218 A CYS 220 n 209 CYS 220 A ALA 221 n 210 ALA 221 A ARG 222 n 211 ARG 222 A LYS 223 n 212 LYS 223 A GLY 223 n 213 A GLY 223 A LYS 224 n 214 LYS 224 A TYR 225 n 215 TYR 225 A GLY 226 n 216 GLY 226 A ILE 227 n 217 ILE 227 A TYR 228 n 218 TYR 228 A THR 229 n 219 THR 229 A LYS 230 n 220 LYS 230 A VAL 231 n 221 VAL 231 A THR 232 n 222 THR 232 A ALA 233 n 223 ALA 233 A PHE 234 n 224 PHE 234 A LEU 235 n 225 LEU 235 A LYS 236 n 226 LYS 236 A TRP 237 n 227 TRP 237 A ILE 238 n 228 ILE 238 A ASP 239 n 229 ASP 239 A ARG 240 n 230 ARG 240 A SER 241 n 231 SER 241 A MET 242 n 232 MET 242 A LYS 243 n 233 LYS 243 A THR 244 n 234 THR 244 A ARG 245 n 235 ARG 245 A n 1 44 L n 2 45 L n 3 46 L n 4 47 L n 5 48 L n 6 49 L n 7 50 L n 8 51 L n 9 52 L n 10 53 L n 11 54 L n 12 55 L n 13 56 L n 14 57 L n 15 58 L n 16 59 L n 17 60 L n 18 61 L n 19 62 L n 20 63 L n 21 64 L n 22 65 L n 23 66 L n 24 67 L n 25 68 L n 26 69 L n 27 70 L n 28 71 L n 29 72 L n 30 73 L n 31 74 L n 32 75 L n 33 76 L n 34 77 L n 35 78 L n 36 79 L n 37 80 L n 38 81 L n 39 82 L n 40 83 L n 41 84 L n 42 85 L n 43 86 L LYS 87 n 44 LYS 87 L LEU 88 n 45 LEU 88 L CYS 89 n 46 CYS 89 L SER 90 n 47 SER 90 L LEU 91 n 48 LEU 91 L ASP 92 n 49 ASP 92 L ASN 93 n 50 ASN 93 L GLY 94 n 51 GLY 94 L ASP 95 n 52 ASP 95 L CYS 96 n 53 CYS 96 L ASP 97 n 54 ASP 97 L GLN 98 n 55 GLN 98 L PHE 99 n 56 PHE 99 L CYS 100 n 57 CYS 100 L HIS 101 n 58 HIS 101 L GLU 102 n 59 GLU 102 L GLU 103 n 60 GLU 103 L GLN 104 n 61 GLN 104 L ASN 105 n 62 ASN 105 L SER 106 n 63 SER 106 L VAL 107 n 64 VAL 107 L VAL 108 n 65 VAL 108 L CYS 109 n 66 CYS 109 L SER 110 n 67 SER 110 L CYS 111 n 68 CYS 111 L ALA 112 n 69 ALA 112 L ARG 113 n 70 ARG 113 L GLY 114 n 71 GLY 114 L TYR 115 n 72 TYR 115 L THR 116 n 73 THR 116 L LEU 117 n 74 LEU 117 L ALA 118 n 75 ALA 118 L ASP 119 n 76 ASP 119 L ASN 120 n 77 ASN 120 L GLY 121 n 78 GLY 121 L LYS 122 n 79 LYS 122 L ALA 123 n 80 ALA 123 L CYS 124 n 81 CYS 124 L ILE 125 n 82 ILE 125 L PRO 126 n 83 PRO 126 L THR 127 n 84 THR 127 L GLY 128 n 85 GLY 128 L PRO 129 n 86 PRO 129 L TYR 130 n 87 TYR 130 L PRO 131 n 88 PRO 131 L CYS 132 n 89 CYS 132 L GLY 133 n 90 GLY 133 L LYS 134 n 91 LYS 134 L GLN 135 n 92 GLN 135 L THR 136 n 93 THR 136 L LEU 137 n 94 LEU 137 L n 95 138 L n 96 139 L author_and_software_defined_assembly PISA,PQS 2 dimeric 2730 -31 12970 A ASP 70 A OD1 ASP 56 1_555 A CA 301 C CA CA 1_555 A ASN 72 A O ASN 58 1_555 64.7 A ASP 70 A OD1 ASP 56 1_555 A CA 301 C CA CA 1_555 A GLU 77 A OE1 GLU 63 1_555 73.8 A ASN 72 A O ASN 58 1_555 A CA 301 C CA CA 1_555 A GLU 77 A OE1 GLU 63 1_555 58.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 139 A N SER 128 A O PRO 198 A O PRO 188 A O THR 201 A O THR 191 A N PHE 208 A N PHE 198 A O TRP 215 A O TRP 205 A N ILE 227 A N ILE 217 A O HIS 83 A O HIS 69 A N VAL 66 A N VAL 52 A N ARG 67 A N ARG 53 A O LEU 32 A O LEU 17 A O LEU 33 A O LEU 18 A N PHE 41 A N PHE 26 A O THR 45 A O THR 30 A N LEU 53 A N LEU 38 A N THR 54 A N THR 39 A O ALA 104 A O ALA 90 A O ARG 107 A O ARG 93 A N GLU 86 A N GLU 72 L N GLU 103 B N GLU 60 L O SER 106 B O SER 63 L N THR 116 B N THR 73 L O ILE 125 B O ILE 82 1 L TYR 44 B TYR 1 1 Y 1 L LYS 45 B LYS 2 1 Y 1 L ASP 46 B ASP 3 1 Y 1 L GLY 47 B GLY 4 1 Y 1 L ASP 48 B ASP 5 1 Y 1 L GLN 49 B GLN 6 1 Y 1 L CYS 50 B CYS 7 1 Y 1 L GLU 51 B GLU 8 1 Y 1 L THR 52 B THR 9 1 Y 1 L SER 53 B SER 10 1 Y 1 L PRO 54 B PRO 11 1 Y 1 L CYS 55 B CYS 12 1 Y 1 L GLN 56 B GLN 13 1 Y 1 L ASN 57 B ASN 14 1 Y 1 L GLN 58 B GLN 15 1 Y 1 L GLY 59 B GLY 16 1 Y 1 L LYS 60 B LYS 17 1 Y 1 L CYS 61 B CYS 18 1 Y 1 L LYS 62 B LYS 19 1 Y 1 L ASP 63 B ASP 20 1 Y 1 L GLY 64 B GLY 21 1 Y 1 L LEU 65 B LEU 22 1 Y 1 L GLY 66 B GLY 23 1 Y 1 L GLU 67 B GLU 24 1 Y 1 L TYR 68 B TYR 25 1 Y 1 L THR 69 B THR 26 1 Y 1 L CYS 70 B CYS 27 1 Y 1 L THR 71 B THR 28 1 Y 1 L CYS 72 B CYS 29 1 Y 1 L LEU 73 B LEU 30 1 Y 1 L GLU 74 B GLU 31 1 Y 1 L GLY 75 B GLY 32 1 Y 1 L PHE 76 B PHE 33 1 Y 1 L GLU 77 B GLU 34 1 Y 1 L GLY 78 B GLY 35 1 Y 1 L LYS 79 B LYS 36 1 Y 1 L ASN 80 B ASN 37 1 Y 1 L CYS 81 B CYS 38 1 Y 1 L GLU 82 B GLU 39 1 Y 1 L LEU 83 B LEU 40 1 Y 1 L PHE 84 B PHE 41 1 Y 1 L THR 85 B THR 42 1 Y 1 L ARG 86 B ARG 43 1 Y 1 L GLU 138 B GLU 95 1 Y 1 L ARG 139 B ARG 96 1 Y 1 A GLU 37 -67.26 10.30 1 A SER 48 -174.66 -174.63 1 A TYR 60 -130.23 -53.92 1 A GLN 61 -62.54 65.00 A 1 A ALA 61 160.29 171.21 1 A THR 73 -67.74 44.75 1 A GLU 74 174.35 30.59 1 A GLU 76 -54.11 92.20 1 A ALA 81 -179.55 132.15 1 A VAL 118 -153.96 86.74 1 A ARG 125 -55.87 -73.48 B 1 A MET 131 -69.75 3.51 1 A GLN 151 -39.93 141.90 1 A LEU 170 -66.23 -70.62 1 A ILE 175 -61.96 99.73 1 A THR 177 -68.00 -179.07 1 A ALA 183 -174.22 135.36 1 A LYS 186 -31.29 139.64 1 A CYS 191 -175.22 -165.78 1 A SER 214 -120.47 -78.03 1 A PHE 234 -144.02 -7.32 1 A ARG 240 -54.00 -9.24 1 A THR 244 61.50 115.66 1 L LEU 88 85.47 96.03 1 L ASP 92 -164.23 60.27 1 L CYS 96 -68.19 -171.23 1 L GLN 98 -126.21 -119.02 1 L GLU 103 -116.73 70.70 1 L GLN 104 38.28 3.35 1 L ASN 105 -159.39 -40.48 1 L ALA 118 -61.90 -179.74 1 L ASN 120 -58.86 -2.49 1 L THR 136 -69.13 89.16 29.70 0.295 0.012 0.201 2.90 8.00 648 5790 81.9 RANDOM 1 0.000 MOLECULAR REPLACEMENT 0.33 5.00 0.37 2.90 8.00 0 2278 39 0 2239 0.009 1.4 1.40 0.349 0.042 0.259 3.07 70 60.30 2.900 20.000 1IOE 5790 1.000 0.0815 1 81.9 phasing GLRF refinement CNX 2000 Human coagulation factor Xa in complex with M55532 1 N N 2 N N 3 N N 4 N N A ALA 56 A ALA 41 HELX_P A TYR 60 A TYR 45 5 1 5 A GLU 124 A GLU 111 HELX_P A LEU 131 A LEU 119 1 2 9 A A A PHE 234 A PHE 224 HELX_P A LYS 243 A LYS 233 1 4 10 L LYS 87 B LYS 44 HELX_P L ASN 93 B ASN 50 1 5 7 L GLY 94 B GLY 51 HELX_P L CYS 96 B CYS 53 5 6 3 disulf 2.029 A CYS 22 A SG CYS 7 1_555 A CYS 27 A SG CYS 12 1_555 disulf 2.031 A CYS 42 A SG CYS 27 1_555 A CYS 58 A SG CYS 43 1_555 disulf 2.032 A CYS 122 A SG CYS 108 1_555 L CYS 132 B SG CYS 89 1_555 disulf 2.022 A CYS 168 A SG CYS 156 1_555 A CYS 182 A SG CYS 170 1_555 disulf 2.034 A CYS 191 A SG CYS 181 1_555 A CYS 220 A SG CYS 209 1_555 disulf 2.035 L CYS 89 B SG CYS 46 1_555 L CYS 100 B SG CYS 57 1_555 disulf 2.023 L CYS 96 B SG CYS 53 1_555 L CYS 109 B SG CYS 66 1_555 disulf 2.017 L CYS 111 B SG CYS 68 1_555 L CYS 124 B SG CYS 81 1_555 metalc 2.931 A ASP 70 A OD1 ASP 56 1_555 A CA 301 C CA CA 1_555 metalc 2.866 A ASN 72 A O ASN 58 1_555 A CA 301 C CA CA 1_555 metalc 2.885 A GLU 77 A OE1 GLU 63 1_555 A CA 301 C CA CA 1_555 HYDROLASE hydrolase, serine protease, blood coagulation factor, complex FA10_HUMAN UNP 1 P00742 FA10_HUMAN UNP 2 P00742 235 469 1IOE 16 245 P00742 A 1 1 235 84 179 1IOE 44 139 P00742 L 2 1 96 5 7 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLN 20 A GLN 5 A GLU 21 A GLU 6 A ILE 137 A ILE 126 A GLY 140 A GLY 129 A PRO 198 A PRO 188 A ARG 202 A ARG 192 A TYR 207 A TYR 197 A TRP 215 A TRP 205 A GLY 226 A GLY 216 A LYS 230 A LYS 220 A ALA 81 A ALA 67 A HIS 83 A HIS 69 A PHE 64 A PHE 50 A VAL 68 A VAL 54 A GLN 30 A GLN 15 A ASN 35 A ASN 20 A GLY 40 A GLY 25 A ILE 46 A ILE 31 A TYR 51 A TYR 36 A THR 54 A THR 39 A ALA 104 A ALA 90 A LEU 108 A LEU 94 A VAL 85 A VAL 71 A LYS 90 A LYS 76 L CYS 100 B CYS 57 L GLU 103 B GLU 60 L SER 106 B SER 63 L CYS 109 B CYS 66 L TYR 115 B TYR 72 L LEU 117 B LEU 74 L CYS 124 B CYS 81 L PRO 126 B PRO 83 BINDING SITE FOR RESIDUE CA A 301 A CA 301 Software 5 BINDING SITE FOR RESIDUE XMA A 401 A XMA 401 Software 18 A ASP 70 A ASP 56 5 1_555 A ASN 72 A ASN 58 5 1_555 A GLN 75 A GLN 61 5 1_555 A GLU 77 A GLU 63 5 1_555 A GLU 80 A GLU 66 5 1_555 A LYS 96 A LYS 82 18 1_555 A GLU 97 A GLU 83 18 1_555 A THR 98 A THR 84 18 1_555 A PHE 174 A PHE 162 18 1_555 A ASP 189 A ASP 179 18 1_555 A ALA 190 A ALA 180 18 1_555 A CYS 191 A CYS 181 18 1_555 A GLN 192 A GLN 182 18 1_555 A SER 195 A SER 185 18 1_555 A SER 214 A SER 204 18 1_555 A TRP 215 A TRP 205 18 1_555 A GLY 216 A GLY 206 18 1_555 A GLU 217 A GLU 207 18 1_555 A GLY 218 A GLY 208 18 1_555 A CYS 220 A CYS 209 18 1_555 A GLY 226 A GLY 216 18 1_555 A ILE 227 A ILE 217 18 1_555 A TYR 228 A TYR 218 18 1_555 19 P 21 21 21