1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Nishikawa, T.
Okamura, H.
Nagadoi, A.
Konig, P.
Rhodes, D.
Nishimura, Y.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
S
C
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
N
N
189
S
C
N
190
N
C
N
191
N
O
N
192
N
C
N
193
N
C
N
194
N
C
N
195
N
C
N
196
N
N
N
197
N
O
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
N
C
N
218
N
C
N
219
N
S
N
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
N
C
Y
238
N
C
Y
239
N
C
Y
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
S
C
N
258
N
C
N
259
N
O
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
O
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
R
C
N
292
N
O
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
N
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
N
342
N
O
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
N
360
N
C
N
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
Y
233
N
doub
Y
234
N
sing
Y
235
N
sing
N
236
N
sing
Y
237
N
doub
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
Y
302
N
doub
Y
303
N
sing
Y
304
N
sing
N
305
N
sing
Y
306
N
doub
Y
307
N
sing
Y
308
N
sing
N
309
N
sing
Y
310
N
sing
Y
311
N
doub
N
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
UK
Structure
STRUE6
2005
0969-2126
9
1237
1251
10.1016/S0969-2126(01)00688-8
11738049
Solution structure of a telomeric DNA complex of human TRF1
2001
10.2210/pdb1ity/pdb
pdb_00001ity
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
8467.753
TRF1
DNA binding domain
1
man
polymer
Telomeric repeat binding factor 1
no
no
TPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED
TPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED
A
my_001000018.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
TRF1
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)pLysS
PLASMID
pET13A
RIKEN Structural Genomics/Proteomics Initiative
RSGI
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
1
0
2002-03-06
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-23
1
4
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
1ba5 contains the same protein truncated in N- and C-termini.
Y
PDBJ
Y
PDBJ
2002-02-15
REL
REL
The structure was determined using triple-resonance NMR spectroscopy.
structures with the least restraint violations
100
25
3D HNHA, 3D HNHB, 3D Sequential assignment protocol, 3D_15N_separated_NOESY, 3D_13C_separated_NOESY, 2D NOESY, 2D TOCSY, 2D DQF-COSY
6.8
ambient
300
K
The structures are generated by 4D simulated annealing with EMBOSS, based on a total of 916 experimental restraints, 852 are NOE-derived distance restraints, 36 hydrogen restraints and 28 dihedral restraints. 25 out of 100 structures which have the lowest violation and a low energies were selected for the final set.
distance geometry/simulated annealing
2
closest to the average
1.5-2.5mM TRF1 U-15N, 13C, 50mM phosphate buffer, 100mM NaCl
90% H2O, 10% D2O, 100% D2O
Nakai, T., Kidera, A., and Nakamura, H.
refinement
EMBOSS
5.0
600
Bruker
DMX
500
Bruker
DRX
500
Bruker
AMX
n
1
371
A
n
2
372
A
GLU
373
n
3
GLU
373
A
LYS
374
n
4
LYS
374
A
HIS
375
n
5
HIS
375
A
ARG
376
n
6
ARG
376
A
ALA
377
n
7
ALA
377
A
ARG
378
n
8
ARG
378
A
LYS
379
n
9
LYS
379
A
ARG
380
n
10
ARG
380
A
GLN
381
n
11
GLN
381
A
ALA
382
n
12
ALA
382
A
TRP
383
n
13
TRP
383
A
LEU
384
n
14
LEU
384
A
TRP
385
n
15
TRP
385
A
GLU
386
n
16
GLU
386
A
GLU
387
n
17
GLU
387
A
ASP
388
n
18
ASP
388
A
LYS
389
n
19
LYS
389
A
ASN
390
n
20
ASN
390
A
LEU
391
n
21
LEU
391
A
ARG
392
n
22
ARG
392
A
SER
393
n
23
SER
393
A
GLY
394
n
24
GLY
394
A
VAL
395
n
25
VAL
395
A
ARG
396
n
26
ARG
396
A
LYS
397
n
27
LYS
397
A
TYR
398
n
28
TYR
398
A
GLY
399
n
29
GLY
399
A
GLU
400
n
30
GLU
400
A
GLY
401
n
31
GLY
401
A
ASN
402
n
32
ASN
402
A
TRP
403
n
33
TRP
403
A
SER
404
n
34
SER
404
A
LYS
405
n
35
LYS
405
A
ILE
406
n
36
ILE
406
A
LEU
407
n
37
LEU
407
A
LEU
408
n
38
LEU
408
A
HIS
409
n
39
HIS
409
A
TYR
410
n
40
TYR
410
A
LYS
411
n
41
LYS
411
A
PHE
412
n
42
PHE
412
A
ASN
413
n
43
ASN
413
A
ASN
414
n
44
ASN
414
A
ARG
415
n
45
ARG
415
A
THR
416
n
46
THR
416
A
SER
417
n
47
SER
417
A
VAL
418
n
48
VAL
418
A
MET
419
n
49
MET
419
A
LEU
420
n
50
LEU
420
A
LYS
421
n
51
LYS
421
A
ASP
422
n
52
ASP
422
A
ARG
423
n
53
ARG
423
A
TRP
424
n
54
TRP
424
A
ARG
425
n
55
ARG
425
A
THR
426
n
56
THR
426
A
MET
427
n
57
MET
427
A
LYS
428
n
58
LYS
428
A
LYS
429
n
59
LYS
429
A
LEU
430
n
60
LEU
430
A
LYS
431
n
61
LYS
431
A
LEU
432
n
62
LEU
432
A
ILE
433
n
63
ILE
433
A
SER
434
n
64
SER
434
A
SER
435
n
65
SER
435
A
ASP
436
n
66
ASP
436
A
SER
437
n
67
SER
437
A
GLU
438
n
68
GLU
438
A
ASP
439
n
69
ASP
439
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
THR
371
A
THR
1
1
Y
1
A
PRO
372
A
PRO
2
1
Y
2
A
THR
371
A
THR
1
1
Y
2
A
PRO
372
A
PRO
2
1
Y
3
A
THR
371
A
THR
1
1
Y
3
A
PRO
372
A
PRO
2
1
Y
4
A
THR
371
A
THR
1
1
Y
4
A
PRO
372
A
PRO
2
1
Y
5
A
THR
371
A
THR
1
1
Y
5
A
PRO
372
A
PRO
2
1
Y
6
A
THR
371
A
THR
1
1
Y
6
A
PRO
372
A
PRO
2
1
Y
7
A
THR
371
A
THR
1
1
Y
7
A
PRO
372
A
PRO
2
1
Y
8
A
THR
371
A
THR
1
1
Y
8
A
PRO
372
A
PRO
2
1
Y
9
A
THR
371
A
THR
1
1
Y
9
A
PRO
372
A
PRO
2
1
Y
10
A
THR
371
A
THR
1
1
Y
10
A
PRO
372
A
PRO
2
1
Y
11
A
THR
371
A
THR
1
1
Y
11
A
PRO
372
A
PRO
2
1
Y
12
A
THR
371
A
THR
1
1
Y
12
A
PRO
372
A
PRO
2
1
Y
13
A
THR
371
A
THR
1
1
Y
13
A
PRO
372
A
PRO
2
1
Y
14
A
THR
371
A
THR
1
1
Y
14
A
PRO
372
A
PRO
2
1
Y
15
A
THR
371
A
THR
1
1
Y
15
A
PRO
372
A
PRO
2
1
Y
16
A
THR
371
A
THR
1
1
Y
16
A
PRO
372
A
PRO
2
1
Y
17
A
THR
371
A
THR
1
1
Y
17
A
PRO
372
A
PRO
2
1
Y
18
A
THR
371
A
THR
1
1
Y
18
A
PRO
372
A
PRO
2
1
Y
19
A
THR
371
A
THR
1
1
Y
19
A
PRO
372
A
PRO
2
1
Y
20
A
THR
371
A
THR
1
1
Y
20
A
PRO
372
A
PRO
2
1
Y
21
A
THR
371
A
THR
1
1
Y
21
A
PRO
372
A
PRO
2
1
Y
22
A
THR
371
A
THR
1
1
Y
22
A
PRO
372
A
PRO
2
1
Y
23
A
THR
371
A
THR
1
1
Y
23
A
PRO
372
A
PRO
2
1
Y
24
A
THR
371
A
THR
1
1
Y
24
A
PRO
372
A
PRO
2
1
Y
25
A
THR
371
A
THR
1
1
Y
25
A
PRO
372
A
PRO
2
1
Y
12
A
ARG
376
0.165
SIDE CHAIN
15
A
ARG
415
0.118
SIDE CHAIN
18
A
ARG
378
0.091
SIDE CHAIN
22
A
ARG
423
0.111
SIDE CHAIN
24
A
ARG
423
0.093
SIDE CHAIN
14
-3.16
0.50
120.30
117.14
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
415
415
415
N
1
A
LYS
374
-69.80
71.33
1
A
HIS
375
172.92
-35.50
1
A
LYS
379
74.15
118.64
1
A
ASN
402
-149.06
53.91
1
A
ASN
414
-154.73
73.76
1
A
LYS
431
-88.94
43.96
1
A
LEU
432
-11.48
93.44
1
A
SER
434
56.50
-135.51
1
A
ASP
436
-146.33
24.80
2
A
ARG
378
49.38
-100.16
2
A
LYS
379
-141.28
36.39
2
A
GLN
381
-69.74
68.97
2
A
ALA
382
-162.26
52.75
2
A
TRP
383
64.55
171.12
2
A
ASN
414
62.19
88.83
2
A
LYS
429
-75.90
-72.25
2
A
LYS
431
179.55
-21.59
2
A
SER
434
-153.77
69.04
3
A
LYS
374
55.87
-116.06
3
A
HIS
375
-157.35
46.27
3
A
ARG
376
71.55
173.25
3
A
ARG
378
-179.39
-167.61
3
A
LYS
379
-31.96
129.63
3
A
ARG
380
-170.71
-168.57
3
A
TRP
383
56.87
79.19
3
A
ASN
402
-76.21
47.61
3
A
LEU
432
67.09
62.09
3
A
SER
434
-165.61
-86.45
3
A
SER
435
-122.72
-109.54
3
A
ASP
436
-150.02
-73.27
4
A
LYS
374
178.37
-70.25
4
A
HIS
375
59.94
-175.09
4
A
ARG
376
66.27
115.29
4
A
ARG
380
-57.53
98.54
4
A
ALA
382
55.19
-131.83
4
A
ASN
414
61.31
83.50
4
A
LEU
430
-178.15
-42.30
4
A
LYS
431
-19.11
-58.43
4
A
LEU
432
-162.72
32.30
5
A
ALA
377
-162.56
57.08
5
A
ARG
380
-77.67
34.71
5
A
ALA
382
176.66
73.61
5
A
LEU
430
178.94
37.22
5
A
LEU
432
-129.34
-56.14
5
A
ILE
433
-79.54
-87.06
6
A
ARG
378
60.57
68.59
6
A
TRP
383
52.38
73.05
6
A
ASN
414
-161.02
64.08
6
A
LYS
431
-159.55
-67.89
6
A
LEU
432
-169.73
-83.00
6
A
SER
434
-158.56
-159.49
6
A
SER
435
72.13
-44.86
7
A
HIS
375
58.08
74.53
7
A
ARG
378
72.37
-59.22
7
A
LYS
379
74.30
120.65
7
A
ALA
382
51.40
-148.12
7
A
ASN
414
54.35
78.02
7
A
SER
434
-178.64
69.74
7
A
GLU
438
111.12
-75.34
8
A
GLN
381
70.15
-39.32
8
A
SER
435
-154.20
36.87
9
A
HIS
375
-156.90
-79.34
9
A
ARG
376
-164.91
91.06
9
A
ARG
380
-85.72
-70.55
9
A
LYS
431
-85.21
-89.92
9
A
LEU
432
175.53
31.41
9
A
SER
434
-178.86
45.32
9
A
SER
435
70.21
-74.68
9
A
ASP
436
21.78
67.64
10
A
ARG
376
65.51
-71.66
10
A
ALA
377
60.48
-157.64
10
A
TRP
383
71.26
112.79
10
A
LEU
432
65.50
66.08
10
A
SER
437
-161.52
-145.37
11
A
HIS
375
79.88
118.63
11
A
ARG
376
73.55
-38.29
11
A
TRP
383
70.61
99.57
11
A
ASN
402
-75.87
46.08
11
A
LYS
429
-27.15
-66.24
11
A
LYS
431
59.44
14.51
11
A
ILE
433
-135.16
-46.76
11
A
SER
435
72.19
176.42
11
A
SER
437
68.26
172.76
11
A
GLU
438
-162.00
114.33
12
A
ARG
376
74.47
108.11
12
A
ARG
378
74.34
-63.87
12
A
LYS
379
176.65
-167.20
12
A
GLN
381
79.54
117.72
12
A
ALA
382
-162.80
48.48
12
A
TRP
383
59.70
170.49
12
A
ASN
402
-76.43
46.17
12
A
ASN
414
65.96
93.72
13
A
LYS
379
56.89
-127.51
13
A
ALA
382
61.17
-138.46
13
A
ASN
402
-76.71
41.84
13
A
LEU
432
-87.85
41.26
13
A
SER
435
-19.19
107.38
13
A
ASP
436
-27.88
-60.68
13
A
SER
437
-79.33
-77.05
14
A
ARG
376
72.10
178.43
14
A
ARG
380
-101.77
-168.11
14
A
ASN
413
-75.74
47.35
14
A
ASN
414
77.65
87.41
14
A
LEU
432
60.46
65.35
14
A
SER
434
66.49
63.76
14
A
GLU
438
69.83
165.79
15
A
LYS
374
79.44
56.47
15
A
HIS
375
75.81
-69.43
15
A
ARG
376
65.85
176.09
15
A
LYS
379
77.31
142.33
15
A
ALA
382
-77.96
-158.71
15
A
ASN
402
-78.25
49.46
15
A
ASN
414
-164.93
42.83
15
A
LYS
429
-75.75
25.78
15
A
LEU
432
-145.41
-50.04
16
A
LYS
374
68.57
151.47
16
A
ARG
376
-156.38
48.54
16
A
ARG
378
-158.05
75.21
16
A
ASN
402
-149.49
45.93
16
A
ASN
414
-158.33
72.14
16
A
LEU
430
-179.78
51.56
16
A
LYS
431
-116.31
-91.93
16
A
SER
435
87.94
-144.82
16
A
SER
437
121.78
131.17
17
A
HIS
375
-78.17
-92.76
17
A
ARG
376
-152.06
-67.88
17
A
ALA
377
-148.67
-13.40
17
A
ARG
380
-120.63
-61.84
17
A
GLN
381
-141.51
-80.82
17
A
ALA
382
-123.59
-153.87
17
A
TRP
383
73.51
69.34
17
A
LEU
430
-170.58
33.63
17
A
LEU
432
-167.12
-54.24
17
A
ILE
433
-69.95
95.79
17
A
SER
435
65.81
-94.90
17
A
SER
437
30.69
-110.15
17
A
GLU
438
164.64
-42.76
18
A
LYS
374
-136.02
-68.45
18
A
ARG
380
72.00
126.64
18
A
GLN
381
73.07
-48.43
18
A
ASN
402
-74.42
43.45
18
A
TYR
410
-97.83
-154.19
18
A
LYS
431
84.71
37.67
18
A
ASP
436
53.42
-146.77
18
A
SER
437
-86.10
-75.38
19
A
HIS
375
-118.08
65.72
19
A
ARG
376
-150.94
48.25
19
A
LYS
379
-73.75
35.00
19
A
GLN
381
-81.21
44.44
19
A
ALA
382
54.80
-172.55
19
A
ASN
402
-75.56
46.74
19
A
ASN
414
66.14
85.10
19
A
LEU
430
-165.45
40.45
19
A
LYS
431
-91.22
-71.81
19
A
LEU
432
-173.79
41.10
19
A
SER
437
-150.60
34.26
20
A
LYS
374
64.26
-166.12
20
A
ARG
380
-163.38
-48.65
20
A
GLN
381
-55.55
-4.05
20
A
ALA
382
-71.74
-162.60
20
A
ASN
414
-168.15
83.54
20
A
LEU
432
75.91
84.40
20
A
ILE
433
-29.42
109.82
20
A
SER
434
-175.15
119.43
21
A
LYS
374
76.08
-63.39
21
A
GLN
381
-148.31
29.27
21
A
ASN
414
62.61
68.98
21
A
ASP
436
-91.14
-72.10
21
A
SER
437
-153.71
41.51
22
A
HIS
375
-85.71
-78.39
22
A
ARG
376
-171.55
-61.21
22
A
LYS
379
-125.49
-66.52
22
A
TRP
383
52.20
89.16
22
A
ASN
402
-76.75
48.77
22
A
ASN
413
-91.39
-61.12
22
A
ASN
414
-156.55
39.56
22
A
LEU
432
63.57
88.38
22
A
ILE
433
-45.83
93.72
22
A
GLU
438
-161.94
-65.74
23
A
LYS
374
66.80
-73.00
23
A
ARG
378
54.93
81.79
23
A
LYS
379
-83.95
-77.05
23
A
ARG
380
70.49
161.34
23
A
ASN
402
-76.67
45.04
23
A
LEU
430
-61.04
-77.49
23
A
LYS
431
-173.42
-48.88
23
A
LEU
432
-28.91
-62.52
24
A
ARG
376
61.42
63.91
24
A
ARG
380
55.31
96.10
24
A
ASN
413
-69.92
-74.74
24
A
LYS
429
-84.21
41.19
24
A
LEU
430
-147.05
-43.69
24
A
LYS
431
123.78
-13.24
24
A
LEU
432
-80.31
46.96
24
A
SER
437
-151.78
75.08
25
A
LYS
374
-170.98
132.14
25
A
HIS
375
-165.16
-67.17
25
A
LYS
379
-164.19
-43.96
25
A
ARG
380
-143.59
-53.57
25
A
TRP
383
70.16
85.77
25
A
ASN
402
-76.29
49.07
25
A
LYS
431
101.52
-21.74
25
A
SER
434
-154.47
-56.68
25
A
SER
435
104.25
162.42
Solution structure of the DNA binding domain of human TRF1
1
N
N
A
LEU
384
A
LEU
14
HELX_P
A
GLY
399
A
GLY
29
1
1
16
A
ASN
402
A
ASN
32
HELX_P
A
TYR
410
A
TYR
40
1
2
9
A
THR
416
A
THR
46
HELX_P
A
LEU
430
A
LEU
60
1
3
15
DNA BINDING PROTEIN
helix-turn-helix, telomeres, DNA binding, Myb domain, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, DNA BINDING PROTEIN
TERF1_HUMAN
UNP
1
371
P54274
TPEKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSED
371
439
1ITY
371
439
P54274
A
1
1
69