1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Inoue, M. Kigawa, T. Yokoyama, S. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be published 0353 Solution structure of the cullin-3 homologue 10.2210/pdb1iuy/pdb pdb_00001iuy 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 10812.579 cullin-3 homologue 1 man polymer no no MAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR TPEDRKVYTYVA MAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR TPEDRKVYTYVA A mmk001000556.1 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus sample cell-free protein synthesis 10090 Mus musculus plasmid P011101-16 RIKEN Structural Genomics/Proteomics Initiative RSGI database_2 pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Database references 1 0 2003-10-07 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-23 1 4 2022-12-21 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_spectrometer.model _struct_ref_seq_dif.details Y PDBJ Y PDBJ 2002-03-08 REL The structure was determined using triple-resonance NMR spectroscopy. target function 200 10 3D_13C-separated_NOESY 3D_15N-separated_NOESY 100mM 6.0 ambient 298 K torsion angle dynamics,simulated annealing 1 lowest energy 1mM protein U-15N,13C; 20mM sodium phosphate buffer; 100mM NaCl; 90% H2O,10% D2O 90% H2O/10% D2O Delaglio processing NMRPipe 1.8 Brunger structure solution CNS 1.0 Brunger refinement CNS 1.0 600 Bruker AVANCE MET 1 n 1 MET 1 A ALA 2 n 2 ALA 2 A ALA 3 n 3 ALA 3 A LYS 4 n 4 LYS 4 A GLN 5 n 5 GLN 5 A GLY 6 n 6 GLY 6 A GLU 7 n 7 GLU 7 A SER 8 n 8 SER 8 A ASP 9 n 9 ASP 9 A PRO 10 n 10 PRO 10 A GLU 11 n 11 GLU 11 A ARG 12 n 12 ARG 12 A LYS 13 n 13 LYS 13 A GLU 14 n 14 GLU 14 A THR 15 n 15 THR 15 A ARG 16 n 16 ARG 16 A GLN 17 n 17 GLN 17 A LYS 18 n 18 LYS 18 A VAL 19 n 19 VAL 19 A ASP 20 n 20 ASP 20 A ASP 21 n 21 ASP 21 A ASP 22 n 22 ASP 22 A ARG 23 n 23 ARG 23 A LYS 24 n 24 LYS 24 A HIS 25 n 25 HIS 25 A GLU 26 n 26 GLU 26 A ILE 27 n 27 ILE 27 A GLU 28 n 28 GLU 28 A ALA 29 n 29 ALA 29 A ALA 30 n 30 ALA 30 A ILE 31 n 31 ILE 31 A VAL 32 n 32 VAL 32 A ARG 33 n 33 ARG 33 A ILE 34 n 34 ILE 34 A MET 35 n 35 MET 35 A LYS 36 n 36 LYS 36 A SER 37 n 37 SER 37 A ARG 38 n 38 ARG 38 A LYS 39 n 39 LYS 39 A LYS 40 n 40 LYS 40 A MET 41 n 41 MET 41 A GLN 42 n 42 GLN 42 A HIS 43 n 43 HIS 43 A ASN 44 n 44 ASN 44 A VAL 45 n 45 VAL 45 A LEU 46 n 46 LEU 46 A VAL 47 n 47 VAL 47 A ALA 48 n 48 ALA 48 A GLU 49 n 49 GLU 49 A VAL 50 n 50 VAL 50 A THR 51 n 51 THR 51 A GLN 52 n 52 GLN 52 A GLN 53 n 53 GLN 53 A LEU 54 n 54 LEU 54 A LYS 55 n 55 LYS 55 A ALA 56 n 56 ALA 56 A ARG 57 n 57 ARG 57 A PHE 58 n 58 PHE 58 A LEU 59 n 59 LEU 59 A PRO 60 n 60 PRO 60 A SER 61 n 61 SER 61 A PRO 62 n 62 PRO 62 A VAL 63 n 63 VAL 63 A VAL 64 n 64 VAL 64 A ILE 65 n 65 ILE 65 A LYS 66 n 66 LYS 66 A LYS 67 n 67 LYS 67 A ARG 68 n 68 ARG 68 A ILE 69 n 69 ILE 69 A GLU 70 n 70 GLU 70 A GLY 71 n 71 GLY 71 A LEU 72 n 72 LEU 72 A ILE 73 n 73 ILE 73 A GLU 74 n 74 GLU 74 A ARG 75 n 75 ARG 75 A GLU 76 n 76 GLU 76 A TYR 77 n 77 TYR 77 A LEU 78 n 78 LEU 78 A ALA 79 n 79 ALA 79 A ARG 80 n 80 ARG 80 A THR 81 n 81 THR 81 A PRO 82 n 82 PRO 82 A GLU 83 n 83 GLU 83 A ASP 84 n 84 ASP 84 A ARG 85 n 85 ARG 85 A LYS 86 n 86 LYS 86 A VAL 87 n 87 VAL 87 A TYR 88 n 88 TYR 88 A THR 89 n 89 THR 89 A TYR 90 n 90 TYR 90 A VAL 91 n 91 VAL 91 A ALA 92 n 92 ALA 92 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N MET 41 A N MET 41 A O TYR 88 A O TYR 88 A O THR 89 A O THR 89 A N ALA 79 A N ALA 79 1 A O ALA 92 A O ALA 92 1 Y 2 A O ALA 92 A O ALA 92 1 Y 3 A O ALA 92 A O ALA 92 1 Y 4 A O ALA 92 A O ALA 92 1 Y 5 A O ALA 92 A O ALA 92 1 Y 6 A O ALA 92 A O ALA 92 1 Y 7 A O ALA 92 A O ALA 92 1 Y 8 A O ALA 92 A O ALA 92 1 Y 9 A O ALA 92 A O ALA 92 1 Y 10 A O ALA 92 A O ALA 92 1 Y 1 A LYS 4 61.75 153.36 1 A GLN 5 -110.68 -169.49 1 A ASP 9 -178.67 -61.55 1 A GLU 11 -169.49 38.00 1 A THR 15 -139.30 -57.57 1 A ARG 16 60.32 76.18 1 A ASP 22 -177.75 -39.07 1 A LYS 24 -98.40 30.16 1 A HIS 25 -137.54 -44.13 1 A LYS 39 68.46 -67.87 1 A LEU 54 -115.99 50.47 1 A ARG 57 -94.20 -71.07 2 A ALA 2 60.61 161.53 2 A ALA 3 60.81 95.87 2 A GLU 7 61.94 151.85 2 A SER 8 -169.93 97.24 2 A ASP 9 -116.61 79.67 2 A GLU 11 60.64 111.12 2 A LYS 13 63.67 139.79 2 A GLU 14 -154.83 44.52 2 A THR 15 -154.24 43.42 2 A LYS 18 -162.57 119.58 2 A VAL 19 -130.44 -68.85 2 A ASP 21 59.84 73.85 2 A LYS 24 -107.84 52.77 2 A HIS 25 -151.18 -46.73 2 A LYS 39 64.75 -76.30 2 A LEU 54 -96.18 42.20 2 A SER 61 -179.87 97.25 2 A ALA 79 -176.90 140.36 2 A ASP 84 174.43 151.38 2 A VAL 91 -109.92 55.20 3 A GLU 7 -147.42 -49.34 3 A SER 8 64.30 -79.31 3 A LYS 13 -100.79 79.53 3 A THR 15 -137.52 -51.43 3 A GLN 17 -137.56 -53.42 3 A VAL 19 -127.98 -57.02 3 A ASP 20 60.31 176.05 3 A LYS 39 63.56 -79.59 3 A LEU 54 -102.77 40.37 3 A PHE 58 -166.59 -167.69 3 A ARG 85 -99.46 31.70 3 A LYS 86 -147.94 25.73 4 A ALA 3 -146.70 29.29 4 A LYS 4 58.12 84.36 4 A ARG 12 64.90 149.95 4 A THR 15 -142.32 36.75 4 A GLN 17 62.48 -81.05 4 A ASP 22 -123.92 -63.16 4 A ARG 23 69.89 -59.65 4 A LYS 39 69.05 -67.43 4 A PRO 60 -69.99 -167.99 5 A ALA 2 63.65 128.29 5 A ALA 3 61.30 173.62 5 A GLN 5 61.25 154.76 5 A GLU 11 -167.56 115.45 5 A ARG 12 -171.68 48.58 5 A VAL 19 -129.72 -58.37 5 A ASP 21 61.51 169.67 5 A LYS 39 66.94 -71.82 5 A LEU 54 -99.19 40.64 5 A SER 61 61.56 115.61 5 A ARG 85 -98.50 35.23 6 A ALA 3 -164.55 32.27 6 A GLN 5 60.64 170.60 6 A ASP 9 -165.80 66.12 6 A PRO 10 -54.99 -168.51 6 A GLU 11 -97.09 39.86 6 A LYS 13 60.20 103.91 6 A GLU 14 -169.38 53.05 6 A ARG 16 -161.38 85.71 6 A ARG 23 -153.54 -70.82 6 A LYS 39 63.10 -80.20 6 A LEU 54 -97.95 33.39 6 A PRO 60 -72.37 -169.14 7 A ALA 2 -173.45 133.01 7 A ALA 3 -97.79 -77.86 7 A ARG 12 -153.80 33.19 7 A THR 15 -177.95 -39.56 7 A ARG 16 62.83 158.11 7 A ASP 20 -169.98 89.40 7 A ARG 23 -161.60 98.93 7 A SER 37 -99.47 -60.77 7 A LYS 39 68.51 -70.37 7 A PHE 58 -170.45 -163.84 7 A SER 61 62.93 119.16 8 A ALA 2 -134.15 -70.45 8 A LYS 4 -149.05 31.64 8 A GLN 5 -161.26 86.09 8 A GLU 7 -176.44 110.80 8 A GLU 11 59.57 76.25 8 A LYS 13 -160.78 -62.98 8 A GLU 14 59.80 84.13 8 A GLN 17 64.21 -76.36 8 A ASP 20 63.78 106.81 8 A ASP 22 -178.21 -39.01 8 A LYS 24 -98.16 37.37 8 A HIS 25 -135.75 -44.03 8 A LYS 39 67.55 -70.01 8 A LEU 54 -108.82 48.44 8 A PHE 58 -177.02 -172.66 8 A SER 61 63.56 125.74 9 A ALA 3 62.95 -80.19 9 A LYS 4 60.29 -175.58 9 A GLN 5 60.50 103.62 9 A ASP 9 -166.52 97.90 9 A GLU 11 -153.91 29.81 9 A ARG 16 63.41 125.81 9 A ASP 21 -59.69 -177.10 9 A ASP 22 -161.28 -44.75 9 A LYS 24 -92.38 47.31 9 A HIS 25 -147.26 -46.65 9 A LYS 39 65.57 -78.50 9 A GLU 76 62.42 70.03 9 A TYR 77 -142.31 -54.50 9 A ALA 79 -170.90 147.11 10 A ALA 2 60.41 178.51 10 A GLU 7 60.08 167.19 10 A ASP 9 -174.30 -62.95 10 A GLU 11 -143.63 39.57 10 A ARG 16 60.23 176.65 10 A GLN 17 60.96 96.43 10 A ASP 21 -149.20 35.57 10 A SER 37 -106.61 -62.80 10 A LYS 39 66.28 -76.65 10 A SER 61 70.81 141.91 10 A LYS 86 -95.88 37.83 Solution structure of the cullin-3 homologue 1 N N A HIS 25 A HIS 25 HELX_P A LYS 39 A LYS 39 1 1 15 A HIS 43 A HIS 43 HELX_P A LEU 54 A LEU 54 1 2 12 A SER 61 A SER 61 HELX_P A ARG 75 A ARG 75 1 3 15 STRUCTURAL GENOMICS, UNKNOWN FUNCTION winged helix, STRUCTURAL GENOMICS, RIKEN Structural Genomics/Proteomics Initiative, RSGI, UNKNOWN FUNCTION CUL3_MOUSE UNP 1 1 Q9JLV5 AAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLART PEDRKVYTYVA 1 91 1IUY 2 92 Q9JLV5 A 1 2 92 1 initiating methionine MET 1 1IUY A Q9JLV5 UNP 1 3 anti-parallel anti-parallel A LYS 40 A LYS 40 A GLN 42 A GLN 42 A VAL 87 A VAL 87 A TYR 90 A TYR 90 A LEU 78 A LEU 78 A ARG 80 A ARG 80 1 P 1