0.013536
0.007815
0.000000
0.000000
0.015630
0.000000
0.000000
0.000000
0.011819
0.00000
0.00000
0.00000
Niwa, H.
Tsuchiya, D.
Makyio, H.
Yoshida, M.
Morikawa, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
73.875
73.875
84.611
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
N
O
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
N
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
Y
184
N
C
Y
185
N
N
Y
186
N
C
Y
187
N
C
Y
188
N
N
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
S
C
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
N
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
S
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
N
N
293
S
C
N
294
N
C
N
295
N
O
N
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
N
C
N
320
N
C
N
321
N
C
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
N
C
N
337
N
O
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
N
N
347
S
C
N
348
N
C
N
349
N
O
N
350
R
C
N
351
N
O
N
352
N
C
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
N
N
364
S
C
N
365
N
C
N
366
N
O
N
367
N
C
N
368
N
C
N
369
N
C
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
N
43
N
sing
Y
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
Y
292
N
doub
Y
293
N
sing
Y
294
N
sing
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
doub
N
299
N
sing
Y
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
UK
Structure
STRUE6
2005
0969-2126
10
1415
1423
10.1016/S0969-2126(02)00855-9
12377127
Hexameric ring structure of the ATPase domain of the membrane-integrated metalloprotease FtsH from Thermus thermophilus HB8
2002
10.2210/pdb1iy1/pdb
pdb_00001iy1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
2001-06-06
MACSCIENCE
OSMIC
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
MACSCIENCE
27385.463
ATP-dependent metalloprotease FtsH
F1
1
man
polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
18.015
water
35
nat
water
no
no
GPLGSVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITA
SGSDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAA
TNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREG
RRKITMKDLEEAAS
GPLGSVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITA
SGSDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAA
TNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREG
RRKITMKDLEEAAS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermus
Escherichia
Escherichia coli
sample
FtsH
274
Thermus thermophilus
469008
Escherichia coli BL21(DE3)
BL21(DE3)
PLASMID
pGEX-6P-1
1
2.43
49.43
VAPOR DIFFUSION, HANGING DROP
8.0
Ammonium sulfate, Tris-HCl, ADP, magnesium chloride, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2002-11-06
1
1
2008-04-27
1
2
2011-07-13
1
3
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1IXZ contains the F1 of FtsH ATPase domain
1IY0 contains the F1 of FtsH ATPase domain with AMP-PNP
1IY2 contains the F2 of FtsH ATPase domain
PDBJ
Y
PDBJ
2002-07-10
REL
REL
ADP
ADENOSINE-5'-DIPHOSPHATE
HOH
water
ADP
1
2
ADP
ADP
1
A
HOH
401
3
HOH
HOH
401
A
HOH
402
3
HOH
HOH
402
A
HOH
403
3
HOH
HOH
403
A
HOH
404
3
HOH
HOH
404
A
HOH
405
3
HOH
HOH
405
A
HOH
406
3
HOH
HOH
406
A
HOH
407
3
HOH
HOH
407
A
HOH
408
3
HOH
HOH
408
A
HOH
409
3
HOH
HOH
409
A
HOH
410
3
HOH
HOH
410
A
HOH
411
3
HOH
HOH
411
A
HOH
412
3
HOH
HOH
412
A
HOH
413
3
HOH
HOH
413
A
HOH
414
3
HOH
HOH
414
A
HOH
415
3
HOH
HOH
415
A
HOH
416
3
HOH
HOH
416
A
HOH
417
3
HOH
HOH
417
A
HOH
418
3
HOH
HOH
418
A
HOH
419
3
HOH
HOH
419
A
HOH
420
3
HOH
HOH
420
A
HOH
421
3
HOH
HOH
421
A
HOH
422
3
HOH
HOH
422
A
HOH
423
3
HOH
HOH
423
A
HOH
424
3
HOH
HOH
424
A
HOH
425
3
HOH
HOH
425
A
HOH
426
3
HOH
HOH
426
A
HOH
427
3
HOH
HOH
427
A
HOH
428
3
HOH
HOH
428
A
HOH
429
3
HOH
HOH
429
A
HOH
430
3
HOH
HOH
430
A
HOH
431
3
HOH
HOH
431
A
HOH
432
3
HOH
HOH
432
A
HOH
433
3
HOH
HOH
433
A
HOH
434
3
HOH
HOH
434
A
HOH
435
3
HOH
HOH
435
A
n
1
141
A
n
2
142
A
n
3
143
A
n
4
144
A
n
5
145
A
n
6
146
A
n
7
147
A
n
8
148
A
n
9
149
A
n
10
150
A
n
11
151
A
LYS
152
n
12
LYS
152
A
VAL
153
n
13
VAL
153
A
THR
154
n
14
THR
154
A
PHE
155
n
15
PHE
155
A
LYS
156
n
16
LYS
156
A
ASP
157
n
17
ASP
157
A
VAL
158
n
18
VAL
158
A
ALA
159
n
19
ALA
159
A
GLY
160
n
20
GLY
160
A
ALA
161
n
21
ALA
161
A
GLU
162
n
22
GLU
162
A
GLU
163
n
23
GLU
163
A
ALA
164
n
24
ALA
164
A
LYS
165
n
25
LYS
165
A
ALA
166
n
26
GLU
166
A
GLU
167
n
27
GLU
167
A
LEU
168
n
28
LEU
168
A
LYS
169
n
29
LYS
169
A
GLU
170
n
30
GLU
170
A
ILE
171
n
31
ILE
171
A
VAL
172
n
32
VAL
172
A
GLU
173
n
33
GLU
173
A
PHE
174
n
34
PHE
174
A
LEU
175
n
35
LEU
175
A
LYS
176
n
36
LYS
176
A
ASN
177
n
37
ASN
177
A
PRO
178
n
38
PRO
178
A
SER
179
n
39
SER
179
A
ARG
180
n
40
ARG
180
A
PHE
181
n
41
PHE
181
A
HIS
182
n
42
HIS
182
A
GLU
183
n
43
GLU
183
A
MET
184
n
44
MET
184
A
GLY
185
n
45
GLY
185
A
ALA
186
n
46
ALA
186
A
ARG
187
n
47
ARG
187
A
ILE
188
n
48
ILE
188
A
PRO
189
n
49
PRO
189
A
LYS
190
n
50
LYS
190
A
GLY
191
n
51
GLY
191
A
VAL
192
n
52
VAL
192
A
LEU
193
n
53
LEU
193
A
LEU
194
n
54
LEU
194
A
VAL
195
n
55
VAL
195
A
GLY
196
n
56
GLY
196
A
PRO
197
n
57
PRO
197
A
PRO
198
n
58
PRO
198
A
GLY
199
n
59
GLY
199
A
VAL
200
n
60
VAL
200
A
GLY
201
n
61
GLY
201
A
LYS
202
n
62
LYS
202
A
THR
203
n
63
THR
203
A
HIS
204
n
64
HIS
204
A
LEU
205
n
65
LEU
205
A
ALA
206
n
66
ALA
206
A
ARG
207
n
67
ARG
207
A
ALA
208
n
68
ALA
208
A
VAL
209
n
69
VAL
209
A
ALA
210
n
70
ALA
210
A
GLY
211
n
71
GLY
211
A
GLU
212
n
72
GLU
212
A
ALA
213
n
73
ALA
213
A
ARG
214
n
74
ARG
214
A
VAL
215
n
75
VAL
215
A
PRO
216
n
76
PRO
216
A
PHE
217
n
77
PHE
217
A
ILE
218
n
78
ILE
218
A
THR
219
n
79
THR
219
A
ALA
220
n
80
ALA
220
A
SER
221
n
81
SER
221
A
GLY
222
n
82
GLY
222
A
SER
223
n
83
SER
223
A
ASP
224
n
84
ASP
224
A
PHE
225
n
85
PHE
225
A
VAL
226
n
86
VAL
226
A
GLU
227
n
87
GLU
227
A
MET
228
n
88
MET
228
A
PHE
229
n
89
PHE
229
A
VAL
230
n
90
VAL
230
A
GLY
231
n
91
GLY
231
A
VAL
232
n
92
VAL
232
A
GLY
233
n
93
GLY
233
A
ALA
234
n
94
ALA
234
A
ALA
235
n
95
ALA
235
A
ARG
236
n
96
ARG
236
A
VAL
237
n
97
VAL
237
A
ARG
238
n
98
ARG
238
A
ASP
239
n
99
ASP
239
A
LEU
240
n
100
LEU
240
A
PHE
241
n
101
PHE
241
A
GLU
242
n
102
GLU
242
A
THR
243
n
103
THR
243
A
ALA
244
n
104
ALA
244
A
LYS
245
n
105
LYS
245
A
ALA
246
n
106
ARG
246
A
HIS
247
n
107
HIS
247
A
ALA
248
n
108
ALA
248
A
PRO
249
n
109
PRO
249
A
CYS
250
n
110
CYS
250
A
ILE
251
n
111
ILE
251
A
VAL
252
n
112
VAL
252
A
PHE
253
n
113
PHE
253
A
ILE
254
n
114
ILE
254
A
ASP
255
n
115
ASP
255
A
GLU
256
n
116
GLU
256
A
ILE
257
n
117
ILE
257
A
ASP
258
n
118
ASP
258
A
ALA
259
n
119
ALA
259
A
VAL
260
n
120
VAL
260
A
GLY
261
n
121
GLY
261
A
ARG
262
n
122
ARG
262
A
n
123
263
A
n
124
264
A
n
125
265
A
n
126
266
A
n
127
267
A
n
128
268
A
n
129
269
A
n
130
270
A
n
131
271
A
ASN
272
n
132
ASN
272
A
ASP
273
n
133
ASP
273
A
GLU
274
n
134
GLU
274
A
ARG
275
n
135
ARG
275
A
GLU
276
n
136
GLU
276
A
GLN
277
n
137
GLN
277
A
THR
278
n
138
THR
278
A
LEU
279
n
139
LEU
279
A
ASN
280
n
140
ASN
280
A
GLN
281
n
141
GLN
281
A
LEU
282
n
142
LEU
282
A
LEU
283
n
143
LEU
283
A
VAL
284
n
144
VAL
284
A
GLU
285
n
145
GLU
285
A
MET
286
n
146
MET
286
A
ASP
287
n
147
ASP
287
A
GLY
288
n
148
GLY
288
A
PHE
289
n
149
PHE
289
A
GLU
290
n
150
GLU
290
A
LYS
291
n
151
LYS
291
A
ASP
292
n
152
ASP
292
A
THR
293
n
153
THR
293
A
ALA
294
n
154
ALA
294
A
ILE
295
n
155
ILE
295
A
VAL
296
n
156
VAL
296
A
VAL
297
n
157
VAL
297
A
MET
298
n
158
MET
298
A
ALA
299
n
159
ALA
299
A
ALA
300
n
160
ALA
300
A
THR
301
n
161
THR
301
A
ASN
302
n
162
ASN
302
A
LYS
303
n
163
ARG
303
A
PRO
304
n
164
PRO
304
A
ASP
305
n
165
ASP
305
A
ILE
306
n
166
ILE
306
A
LEU
307
n
167
LEU
307
A
ASP
308
n
168
ASP
308
A
PRO
309
n
169
PRO
309
A
ALA
310
n
170
ALA
310
A
LEU
311
n
171
LEU
311
A
LEU
312
n
172
LEU
312
A
ARG
313
n
173
ARG
313
A
PRO
314
n
174
PRO
314
A
GLY
315
n
175
GLY
315
A
ARG
316
n
176
ARG
316
A
PHE
317
n
177
PHE
317
A
ASP
318
n
178
ASP
318
A
ARG
319
n
179
ARG
319
A
GLN
320
n
180
GLN
320
A
ILE
321
n
181
ILE
321
A
ALA
322
n
182
ALA
322
A
ILE
323
n
183
ILE
323
A
ASP
324
n
184
ASP
324
A
ALA
325
n
185
ALA
325
A
PRO
326
n
186
PRO
326
A
ASP
327
n
187
ASP
327
A
VAL
328
n
188
VAL
328
A
LYS
329
n
189
LYS
329
A
GLY
330
n
190
GLY
330
A
ARG
331
n
191
ARG
331
A
GLU
332
n
192
GLU
332
A
GLN
333
n
193
GLN
333
A
ILE
334
n
194
ILE
334
A
LEU
335
n
195
LEU
335
A
ARG
336
n
196
ARG
336
A
ILE
337
n
197
ILE
337
A
HIS
338
n
198
HIS
338
A
ALA
339
n
199
ALA
339
A
ARG
340
n
200
ARG
340
A
GLY
341
n
201
GLY
341
A
LYS
342
n
202
LYS
342
A
PRO
343
n
203
PRO
343
A
LEU
344
n
204
LEU
344
A
ALA
345
n
205
ALA
345
A
GLU
346
n
206
GLU
346
A
ASP
347
n
207
ASP
347
A
VAL
348
n
208
VAL
348
A
ASP
349
n
209
ASP
349
A
LEU
350
n
210
LEU
350
A
ALA
351
n
211
ALA
351
A
LEU
352
n
212
LEU
352
A
LEU
353
n
213
LEU
353
A
ALA
354
n
214
ALA
354
A
LYS
355
n
215
LYS
355
A
ARG
356
n
216
ARG
356
A
THR
357
n
217
THR
357
A
PRO
358
n
218
PRO
358
A
GLY
359
n
219
GLY
359
A
PHE
360
n
220
PHE
360
A
VAL
361
n
221
VAL
361
A
GLY
362
n
222
GLY
362
A
ALA
363
n
223
ALA
363
A
ASP
364
n
224
ASP
364
A
LEU
365
n
225
LEU
365
A
GLU
366
n
226
GLU
366
A
ASN
367
n
227
ASN
367
A
LEU
368
n
228
LEU
368
A
LEU
369
n
229
LEU
369
A
ASN
370
n
230
ASN
370
A
GLU
371
n
231
GLU
371
A
ALA
372
n
232
ALA
372
A
ALA
373
n
233
ALA
373
A
LEU
374
n
234
LEU
374
A
LEU
375
n
235
LEU
375
A
ALA
376
n
236
ALA
376
A
ALA
377
n
237
ALA
377
A
ARG
378
n
238
ARG
378
A
GLU
379
n
239
GLU
379
A
GLY
380
n
240
GLY
380
A
ARG
381
n
241
ARG
381
A
ARG
382
n
242
ARG
382
A
LYS
383
n
243
LYS
383
A
ILE
384
n
244
ILE
384
A
THR
385
n
245
THR
385
A
MET
386
n
246
MET
386
A
LYS
387
n
247
LYS
387
A
ASP
388
n
248
ASP
388
A
LEU
389
n
249
LEU
389
A
GLU
390
n
250
GLU
390
A
GLU
391
n
251
GLU
391
A
ALA
392
n
252
ALA
392
A
ALA
393
n
253
ALA
393
A
SER
393
n
254
A
SER
393
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
218
A
N
ILE
78
A
O
PHE
253
A
O
PHE
113
A
N
VAL
252
A
N
VAL
112
A
O
MET
298
A
O
MET
158
A
O
ALA
299
A
O
ALA
159
A
N
LEU
194
A
N
LEU
54
A
N
LEU
193
A
N
LEU
53
A
O
ILE
321
A
O
ILE
181
1
A
CG
LYS
152
A
CG
LYS
12
1
Y
1
A
CD
LYS
152
A
CD
LYS
12
1
Y
1
A
CE
LYS
152
A
CE
LYS
12
1
Y
1
A
NZ
LYS
152
A
NZ
LYS
12
1
Y
1
A
CG
LYS
156
A
CG
LYS
16
1
Y
1
A
CD
LYS
156
A
CD
LYS
16
1
Y
1
A
CE
LYS
156
A
CE
LYS
16
1
Y
1
A
NZ
LYS
156
A
NZ
LYS
16
1
Y
1
A
CG
GLU
162
A
CG
GLU
22
1
Y
1
A
CD
GLU
162
A
CD
GLU
22
1
Y
1
A
OE1
GLU
162
A
OE1
GLU
22
1
Y
1
A
OE2
GLU
162
A
OE2
GLU
22
1
Y
1
A
CG
GLU
166
A
CG
GLU
26
1
Y
1
A
CD
GLU
166
A
CD
GLU
26
1
Y
1
A
OE1
GLU
166
A
OE1
GLU
26
1
Y
1
A
OE2
GLU
166
A
OE2
GLU
26
1
Y
1
A
CG
LYS
169
A
CG
LYS
29
1
Y
1
A
CD
LYS
169
A
CD
LYS
29
1
Y
1
A
CE
LYS
169
A
CE
LYS
29
1
Y
1
A
NZ
LYS
169
A
NZ
LYS
29
1
Y
1
A
CG
GLU
173
A
CG
GLU
33
1
Y
1
A
CD
GLU
173
A
CD
GLU
33
1
Y
1
A
OE1
GLU
173
A
OE1
GLU
33
1
Y
1
A
OE2
GLU
173
A
OE2
GLU
33
1
Y
1
A
CG
ASN
177
A
CG
ASN
37
1
Y
1
A
OD1
ASN
177
A
OD1
ASN
37
1
Y
1
A
ND2
ASN
177
A
ND2
ASN
37
1
Y
1
A
CG
ARG
180
A
CG
ARG
40
1
Y
1
A
CD
ARG
180
A
CD
ARG
40
1
Y
1
A
NE
ARG
180
A
NE
ARG
40
1
Y
1
A
CZ
ARG
180
A
CZ
ARG
40
1
Y
1
A
NH1
ARG
180
A
NH1
ARG
40
1
Y
1
A
NH2
ARG
180
A
NH2
ARG
40
1
Y
1
A
CG
HIS
182
A
CG
HIS
42
1
Y
1
A
ND1
HIS
182
A
ND1
HIS
42
1
Y
1
A
CD2
HIS
182
A
CD2
HIS
42
1
Y
1
A
CE1
HIS
182
A
CE1
HIS
42
1
Y
1
A
NE2
HIS
182
A
NE2
HIS
42
1
Y
1
A
CG
ARG
187
A
CG
ARG
47
1
Y
1
A
CD
ARG
187
A
CD
ARG
47
1
Y
1
A
NE
ARG
187
A
NE
ARG
47
1
Y
1
A
CZ
ARG
187
A
CZ
ARG
47
1
Y
1
A
NH1
ARG
187
A
NH1
ARG
47
1
Y
1
A
NH2
ARG
187
A
NH2
ARG
47
1
Y
1
A
CG
ARG
246
A
CG
ARG
106
1
Y
1
A
CD
ARG
246
A
CD
ARG
106
1
Y
1
A
NE
ARG
246
A
NE
ARG
106
1
Y
1
A
CZ
ARG
246
A
CZ
ARG
106
1
Y
1
A
NH1
ARG
246
A
NH1
ARG
106
1
Y
1
A
NH2
ARG
246
A
NH2
ARG
106
1
Y
1
A
CG
ARG
262
A
CG
ARG
122
1
Y
1
A
CD
ARG
262
A
CD
ARG
122
1
Y
1
A
NE
ARG
262
A
NE
ARG
122
1
Y
1
A
CZ
ARG
262
A
CZ
ARG
122
1
Y
1
A
NH1
ARG
262
A
NH1
ARG
122
1
Y
1
A
NH2
ARG
262
A
NH2
ARG
122
1
Y
1
A
CG
GLU
290
A
CG
GLU
150
1
Y
1
A
CD
GLU
290
A
CD
GLU
150
1
Y
1
A
OE1
GLU
290
A
OE1
GLU
150
1
Y
1
A
OE2
GLU
290
A
OE2
GLU
150
1
Y
1
A
CG
LYS
291
A
CG
LYS
151
1
Y
1
A
CD
LYS
291
A
CD
LYS
151
1
Y
1
A
CE
LYS
291
A
CE
LYS
151
1
Y
1
A
NZ
LYS
291
A
NZ
LYS
151
1
Y
1
A
CG
ASP
292
A
CG
ASP
152
1
Y
1
A
OD1
ASP
292
A
OD1
ASP
152
1
Y
1
A
OD2
ASP
292
A
OD2
ASP
152
1
Y
1
A
CG
ARG
303
A
CG
ARG
163
1
Y
1
A
CD
ARG
303
A
CD
ARG
163
1
Y
1
A
NE
ARG
303
A
NE
ARG
163
1
Y
1
A
CZ
ARG
303
A
CZ
ARG
163
1
Y
1
A
NH1
ARG
303
A
NH1
ARG
163
1
Y
1
A
NH2
ARG
303
A
NH2
ARG
163
1
Y
1
A
CG
ARG
319
A
CG
ARG
179
1
Y
1
A
CD
ARG
319
A
CD
ARG
179
1
Y
1
A
NE
ARG
319
A
NE
ARG
179
1
Y
1
A
CZ
ARG
319
A
CZ
ARG
179
1
Y
1
A
NH1
ARG
319
A
NH1
ARG
179
1
Y
1
A
NH2
ARG
319
A
NH2
ARG
179
1
Y
1
A
CG
ARG
340
A
CG
ARG
200
1
Y
1
A
CD
ARG
340
A
CD
ARG
200
1
Y
1
A
NE
ARG
340
A
NE
ARG
200
1
Y
1
A
CZ
ARG
340
A
CZ
ARG
200
1
Y
1
A
NH1
ARG
340
A
NH1
ARG
200
1
Y
1
A
NH2
ARG
340
A
NH2
ARG
200
1
Y
1
A
CG
GLU
346
A
CG
GLU
206
1
Y
1
A
CD
GLU
346
A
CD
GLU
206
1
Y
1
A
OE1
GLU
346
A
OE1
GLU
206
1
Y
1
A
OE2
GLU
346
A
OE2
GLU
206
1
Y
1
A
CG
GLU
366
A
CG
GLU
226
1
Y
1
A
CD
GLU
366
A
CD
GLU
226
1
Y
1
A
OE1
GLU
366
A
OE1
GLU
226
1
Y
1
A
OE2
GLU
366
A
OE2
GLU
226
1
Y
1
A
CG
LEU
375
A
CG
LEU
235
1
Y
1
A
CD1
LEU
375
A
CD1
LEU
235
1
Y
1
A
CD2
LEU
375
A
CD2
LEU
235
1
Y
1
A
CG
ARG
381
A
CG
ARG
241
1
Y
1
A
CD
ARG
381
A
CD
ARG
241
1
Y
1
A
NE
ARG
381
A
NE
ARG
241
1
Y
1
A
CZ
ARG
381
A
CZ
ARG
241
1
Y
1
A
NH1
ARG
381
A
NH1
ARG
241
1
Y
1
A
NH2
ARG
381
A
NH2
ARG
241
1
Y
1
A
CG
ARG
382
A
CG
ARG
242
1
Y
1
A
CD
ARG
382
A
CD
ARG
242
1
Y
1
A
NE
ARG
382
A
NE
ARG
242
1
Y
1
A
CZ
ARG
382
A
CZ
ARG
242
1
Y
1
A
NH1
ARG
382
A
NH1
ARG
242
1
Y
1
A
NH2
ARG
382
A
NH2
ARG
242
1
Y
1
A
CG
GLU
391
A
CG
GLU
251
1
Y
1
A
CD
GLU
391
A
CD
GLU
251
1
Y
1
A
OE1
GLU
391
A
OE1
GLU
251
1
Y
1
A
OE2
GLU
391
A
OE2
GLU
251
1
Y
1
A
GLY
141
A
GLY
1
1
Y
1
A
PRO
142
A
PRO
2
1
Y
1
A
LEU
143
A
LEU
3
1
Y
1
A
GLY
144
A
GLY
4
1
Y
1
A
SER
145
A
SER
5
1
Y
1
A
VAL
146
A
VAL
6
1
Y
1
A
LEU
147
A
LEU
7
1
Y
1
A
THR
148
A
THR
8
1
Y
1
A
GLU
149
A
GLU
9
1
Y
1
A
ALA
150
A
ALA
10
1
Y
1
A
PRO
151
A
PRO
11
1
Y
1
A
LYS
263
A
LYS
123
1
Y
1
A
ARG
264
A
ARG
124
1
Y
1
A
GLY
265
A
GLY
125
1
Y
1
A
SER
266
A
SER
126
1
Y
1
A
GLY
267
A
GLY
127
1
Y
1
A
VAL
268
A
VAL
128
1
Y
1
A
GLY
269
A
GLY
129
1
Y
1
A
GLY
270
A
GLY
130
1
Y
1
A
GLY
271
A
GLY
131
1
Y
1
A
LYS
190
48.94
24.68
1
A
ALA
220
-170.94
-179.19
1
A
HIS
247
-107.91
44.49
1
A
CYS
250
172.44
177.37
1
A
ASP
292
-64.96
2.09
1
A
ALA
294
-92.34
51.97
1
A
ARG
303
-115.97
72.87
1
A
ARG
316
-111.71
-122.80
1
A
ASP
318
-102.63
59.16
1
A
ARG
319
178.86
128.64
0.2780000
0.2070000
2.8
12
465
6424
6300
RANDOM
1
0
MOLECULAR REPLACEMENT
Engh & Huber
0.503
0.334
5.0
0.505
0.3838
2.8
12
35
1748
27
0
1686
1.22
0.0071
2.8
50
1IY1
6477
6399
0
0
1
98.8
2.8
2.9
99.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
CNS
Crystal structure of the FtsH ATPase domain with ADP from Thermus thermophilus
1
N
N
2
N
N
3
N
N
A
ALA
161
A
ALA
21
HELX_P
A
LEU
168
A
LEU
28
1
1
8
A
LEU
168
A
LEU
28
HELX_P
A
ASN
177
A
ASN
37
1
2
10
A
ASN
177
A
ASN
37
HELX_P
A
MET
184
A
MET
44
1
3
8
A
GLY
201
A
GLY
61
HELX_P
A
ALA
213
A
ALA
73
1
4
13
A
GLY
222
A
GLY
82
HELX_P
A
MET
228
A
MET
88
1
5
7
A
GLY
231
A
GLY
91
HELX_P
A
HIS
247
A
HIS
107
1
6
17
A
ILE
257
A
ILE
117
HELX_P
A
ARG
262
A
ARG
122
1
7
6
A
ASN
272
A
ASN
132
HELX_P
A
GLY
288
A
GLY
148
1
8
17
A
ASP
308
A
ASP
168
HELX_P
A
ARG
313
A
ARG
173
5
9
6
A
ASP
327
A
ASP
187
HELX_P
A
ARG
340
A
ARG
200
1
10
14
A
ASP
349
A
ASP
209
HELX_P
A
ARG
356
A
ARG
216
1
11
8
A
VAL
361
A
VAL
221
HELX_P
A
GLU
379
A
GLU
239
1
12
19
A
THR
385
A
THR
245
HELX_P
A
SER
393
A
SER
254
1
13
10
A
HYDROLASE
AAA domain fold, HYDROLASE
A
ALA
248
A
ALA
108
1
A
PRO
249
A
PRO
109
-0.44
Q9LCZ4_THETH
UNP
1
141
Q9LCZ4
KSRARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITA
SGSDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAA
TNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREG
RRKITMKDLEEAAD
146
393
1IY1
146
393
Q9LCZ4
A
1
6
253
1
linker
GLY
141
1IY1
A
Q9LCZ4
UNP
1
1
linker
PRO
142
1IY1
A
Q9LCZ4
UNP
2
1
linker
LEU
143
1IY1
A
Q9LCZ4
UNP
3
1
linker
GLY
144
1IY1
A
Q9LCZ4
UNP
4
1
linker
SER
145
1IY1
A
Q9LCZ4
UNP
5
1
cloning artifact
SER
393
1IY1
A
A
Q9LCZ4
UNP
254
5
parallel
parallel
parallel
parallel
A
PHE
217
A
PHE
77
A
SER
221
A
SER
81
A
CYS
250
A
CYS
110
A
ASP
255
A
ASP
115
A
ILE
295
A
ILE
155
A
THR
301
A
THR
161
A
GLY
191
A
GLY
51
A
VAL
195
A
VAL
55
A
GLN
320
A
GLN
180
A
ALA
322
A
ALA
182
BINDING SITE FOR RESIDUE ADP A 1
A
ADP
1
Software
14
A
ASP
157
A
ASP
17
14
1_555
A
ALA
159
A
ALA
19
14
1_555
A
PRO
197
A
PRO
57
14
1_555
A
PRO
198
A
PRO
58
14
1_555
A
GLY
199
A
GLY
59
14
1_555
A
VAL
200
A
VAL
60
14
1_555
A
GLY
201
A
GLY
61
14
1_555
A
LYS
202
A
LYS
62
14
1_555
A
THR
203
A
THR
63
14
1_555
A
HIS
204
A
HIS
64
14
1_555
A
GLN
333
A
GLN
193
14
1_555
A
ILE
334
A
ILE
194
14
1_555
A
ILE
337
A
ILE
197
14
1_555
A
HOH
435
C
HOH
14
1_555
170
P 65