1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Hemmi, H. Kumazaki, T. Yamazaki, T. Kojima, S. Yoshida, T. Kyogoku, Y. Katsu, M. Yokosawa, H. Miura, K. Kobayashi, Y. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N O N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 N C N 109 N C N 110 N O N 111 N O N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N N N 118 S C N 119 N C N 120 N O N 121 N C Y 122 N C Y 123 N N Y 124 N C Y 125 N C Y 126 N N N 127 N O N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N N N 139 S C N 140 N C N 141 N O N 142 N C N 143 N C N 144 N C N 145 N C N 146 N O N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N N N 161 S C N 162 N C N 163 N O N 164 N C N 165 N C N 166 N C N 167 N C N 168 N N N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N N N 186 S C N 187 N C N 188 N O N 189 N C N 190 N C N 191 N S N 192 N C N 193 N O N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C Y 210 N C Y 211 N C Y 212 N C Y 213 N C Y 214 N C Y 215 N C N 216 N O N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N N N 229 S C N 230 N C N 231 N O N 232 N C N 233 N C N 234 N C N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N N N 246 S C N 247 N C N 248 N O N 249 N C N 250 N O N 251 N O N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 R C N 264 N O N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C Y 281 N C Y 282 N C Y 283 N C Y 284 N C Y 285 N C Y 286 N C N 287 N O N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N N N 301 S C N 302 N C N 303 N O N 304 N C N 305 N C N 306 N C N 307 N O N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing Y 121 N sing Y 122 N doub Y 123 N doub N 124 N sing Y 125 N sing N 126 N sing Y 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N doub N 202 N sing N 203 N sing N 204 N sing N 205 N sing Y 206 N doub Y 207 N sing Y 208 N sing N 209 N sing Y 210 N doub N 211 N sing Y 212 N doub N 213 N sing Y 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N doub N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing Y 275 N doub Y 276 N sing Y 277 N sing N 278 N sing Y 279 N doub N 280 N sing Y 281 N doub N 282 N sing Y 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing US BIOCHEMISTRY BICHAW 0033 0006-2960 42 2524 2534 10.1021/bi026727c 12614146 Inhibitory Specificity Change of Ovomucoid Third Domain of the Silver Pheasant upon Introduction of an Engineered Cys14-Cys39 Bond 2003 10.2210/pdb1iy5/pdb pdb_00001iy5 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 5860.613 OMSVP3 third domain 1 man polymer ovomucoid no no AVSVDCSEYPKPACTMEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC AVSVDCSEYPKPACTMEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n silver pheasant Lophura Escherichia Escherichia coli sample 9046 Lophura nycthemera 511693 Escherichia coli BL21 BL21 PLASMID pET22b database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Data collection 1 0 2003-03-11 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-23 1 4 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name 1IY6 contains OMSVP3 variant, P14C/N39C PDBJ Y PDBJ 2002-07-23 REL REL This structure was determined using standard 2D homonuclear techniques. low total energy and low deviation from mean structure 100 15 NOESY DQF-COSY TOCSY 4.0 ambient 298 K distance geometry, simulated annealing 11 lowest energy 4.0mM OMSVP3; 90%H2O, 10% D2O 90% H2O/10% D2O Bruker collection XwinNMR 2.6 Delaglio processing NMRPipe 2.1 Garrett data analysis NMRPIPP 4.3.2 Brunger refinement X-PLOR 3.1 500 Bruker AMX 600 Bruker DRX ALA 3 n 1 ALA 3 A VAL 4 n 2 VAL 4 A SER 5 n 3 SER 5 A VAL 6 n 4 VAL 6 A ASP 7 n 5 ASP 7 A CYS 8 n 6 CYS 8 A SER 9 n 7 SER 9 A GLU 10 n 8 GLU 10 A TYR 11 n 9 TYR 11 A PRO 12 n 10 PRO 12 A LYS 13 n 11 LYS 13 A PRO 14 n 12 PRO 14 A ALA 15 n 13 ALA 15 A CYS 16 n 14 CYS 16 A THR 17 n 15 THR 17 A MET 18 n 16 MET 18 A GLU 19 n 17 GLU 19 A TYR 20 n 18 TYR 20 A ARG 21 n 19 ARG 21 A PRO 22 n 20 PRO 22 A LEU 23 n 21 LEU 23 A CYS 24 n 22 CYS 24 A GLY 25 n 23 GLY 25 A SER 26 n 24 SER 26 A ASP 27 n 25 ASP 27 A ASN 28 n 26 ASN 28 A LYS 29 n 27 LYS 29 A THR 30 n 28 THR 30 A TYR 31 n 29 TYR 31 A GLY 32 n 30 GLY 32 A ASN 33 n 31 ASN 33 A LYS 34 n 32 LYS 34 A CYS 35 n 33 CYS 35 A ASN 36 n 34 ASN 36 A PHE 37 n 35 PHE 37 A CYS 38 n 36 CYS 38 A ASN 39 n 37 ASN 39 A ALA 40 n 38 ALA 40 A VAL 41 n 39 VAL 41 A VAL 42 n 40 VAL 42 A GLU 43 n 41 GLU 43 A SER 44 n 42 SER 44 A ASN 45 n 43 ASN 45 A GLY 46 n 44 GLY 46 A THR 47 n 45 THR 47 A LEU 48 n 46 LEU 48 A THR 49 n 47 THR 49 A LEU 50 n 48 LEU 50 A SER 51 n 49 SER 51 A HIS 52 n 50 HIS 52 A PHE 53 n 51 PHE 53 A GLY 54 n 52 GLY 54 A LYS 55 n 53 LYS 55 A CYS 56 n 54 CYS 56 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LYS 29 A O LYS 27 A N GLY 25 A N GLY 23 A N CYS 24 A N CYS 22 A O SER 51 A O SER 49 1 A ARG 21 0.316 SIDE CHAIN 2 A ARG 21 0.162 SIDE CHAIN 3 A ARG 21 0.283 SIDE CHAIN 4 A ARG 21 0.211 SIDE CHAIN 5 A ARG 21 0.241 SIDE CHAIN 6 A ARG 21 0.303 SIDE CHAIN 7 A ARG 21 0.287 SIDE CHAIN 8 A ARG 21 0.183 SIDE CHAIN 9 A ARG 21 0.194 SIDE CHAIN 10 A ARG 21 0.301 SIDE CHAIN 11 A ARG 21 0.307 SIDE CHAIN 12 A ARG 21 0.180 SIDE CHAIN 13 A ARG 21 0.284 SIDE CHAIN 14 A ARG 21 0.309 SIDE CHAIN 15 A ARG 21 0.109 SIDE CHAIN 1 A VAL 6 55.72 164.80 1 A CYS 8 -102.25 55.04 1 A ALA 15 169.06 146.89 1 A TYR 20 -97.66 45.72 1 A ASN 33 177.71 173.88 1 A THR 49 -120.36 -165.04 1 A HIS 52 178.98 108.33 1 A PHE 53 -43.63 92.48 2 A SER 5 161.20 -57.16 2 A CYS 8 -99.67 53.35 2 A GLU 10 -89.33 44.34 2 A ASN 33 176.37 -165.32 2 A THR 49 -132.20 -149.98 2 A HIS 52 177.61 104.84 2 A PHE 53 -44.84 93.83 3 A ASP 7 -69.50 86.48 3 A CYS 8 -89.15 31.75 3 A GLU 10 -90.87 35.00 3 A GLU 19 -54.95 173.07 3 A TYR 20 -140.80 37.18 3 A ASN 33 172.87 172.09 3 A THR 49 -123.85 -152.03 3 A HIS 52 176.99 110.07 3 A PHE 53 -42.27 93.72 4 A VAL 4 -137.41 -48.53 4 A SER 5 175.57 -58.25 4 A ASN 33 173.71 169.77 4 A ASN 45 75.51 -0.47 4 A THR 47 -101.46 42.48 4 A THR 49 -109.60 -157.09 4 A HIS 52 167.55 105.15 4 A PHE 53 -47.00 99.88 5 A SER 5 49.46 -91.70 5 A CYS 8 -81.90 45.17 5 A ALA 15 -176.62 144.11 5 A CYS 16 -126.31 -166.54 5 A SER 26 -48.84 -18.17 5 A ASN 33 175.09 -172.47 5 A ASN 45 76.90 -0.47 5 A THR 49 -137.75 -153.55 5 A HIS 52 178.09 109.55 5 A PHE 53 -44.60 103.67 6 A CYS 8 -80.66 40.44 6 A ALA 15 168.58 -171.36 6 A ASN 33 172.84 -168.17 6 A THR 49 -98.22 -152.63 6 A HIS 52 177.73 111.62 6 A PHE 53 -43.35 93.86 7 A SER 5 83.97 -56.48 7 A CYS 16 -116.44 -164.39 7 A ASN 33 -174.06 -176.38 7 A THR 47 -87.96 39.42 7 A THR 49 -100.88 -152.36 7 A HIS 52 177.61 111.39 7 A PHE 53 -43.33 94.41 8 A VAL 4 -87.46 -118.29 8 A ASP 7 -96.87 33.35 8 A CYS 8 13.76 65.07 8 A SER 9 -29.75 -65.68 8 A TYR 20 -100.49 41.25 8 A ASN 33 173.70 166.47 8 A THR 49 -122.41 -151.98 8 A HIS 52 172.68 105.30 8 A PHE 53 -46.92 97.05 9 A SER 5 43.84 76.48 9 A ALA 15 -170.67 -178.45 9 A TYR 20 -140.96 35.86 9 A SER 26 -48.69 -18.77 9 A ASN 33 175.56 172.82 9 A THR 49 -125.41 -154.53 9 A HIS 52 178.81 108.13 9 A PHE 53 -44.11 99.81 10 A SER 5 -90.02 31.61 10 A SER 9 -34.67 -75.84 10 A ASN 33 173.77 -178.48 10 A HIS 52 177.55 108.82 10 A PHE 53 -44.61 96.02 11 A GLU 10 -86.79 35.76 11 A ASN 28 71.44 38.05 11 A ASN 33 179.26 169.10 11 A THR 49 -128.81 -151.23 11 A HIS 52 -176.71 110.68 11 A PHE 53 -44.66 94.98 12 A VAL 4 -100.50 -80.07 12 A SER 5 -143.67 11.15 12 A GLU 10 -93.79 40.60 12 A ASN 33 178.50 175.88 12 A THR 49 -98.72 -152.63 12 A HIS 52 179.34 114.55 12 A PHE 53 -44.51 92.63 13 A VAL 4 -135.39 -54.43 13 A SER 5 56.65 161.68 13 A SER 9 -35.91 -70.04 13 A CYS 16 -103.09 -168.46 13 A ASN 33 176.90 -169.40 13 A THR 49 -130.88 -150.96 13 A HIS 52 -177.02 104.65 13 A PHE 53 -42.96 96.50 14 A SER 5 69.37 122.04 14 A ASP 7 34.00 -133.48 14 A ALA 15 169.92 126.97 14 A SER 26 -49.88 -17.66 14 A ASN 33 175.77 -172.70 14 A THR 49 -125.38 -147.49 14 A SER 51 -130.88 -31.73 14 A HIS 52 177.60 106.77 15 A VAL 4 -114.50 -133.81 15 A SER 5 76.22 163.21 15 A SER 9 -44.08 84.86 15 A GLU 10 40.14 84.87 15 A TYR 20 -91.07 44.43 15 A ASN 33 178.98 -168.92 15 A ASN 45 81.03 -4.24 15 A THR 49 -134.91 -151.74 15 A HIS 52 178.19 108.71 15 A PHE 53 -42.65 95.12 Solution structure of wild type OMSVP3 1 N N A ASN 33 A ASN 31 HELX_P A ASN 45 A ASN 43 1 1 13 disulf 2.023 A CYS 8 A SG CYS 6 1_555 A CYS 38 A SG CYS 36 1_555 disulf 2.021 A CYS 16 A SG CYS 14 1_555 A CYS 35 A SG CYS 33 1_555 disulf 2.020 A CYS 24 A SG CYS 22 1_555 A CYS 56 A SG CYS 54 1_555 HYDROLASE solution structure, CSH motif, OMSVP3, ovomucoid third domain, protease inhibitor, HYDROLASE A TYR 11 A TYR 9 1 A PRO 12 A PRO 10 1.15 A TYR 11 A TYR 9 2 A PRO 12 A PRO 10 0.28 A TYR 11 A TYR 9 3 A PRO 12 A PRO 10 -0.06 A TYR 11 A TYR 9 4 A PRO 12 A PRO 10 0.55 A TYR 11 A TYR 9 5 A PRO 12 A PRO 10 0.50 A TYR 11 A TYR 9 6 A PRO 12 A PRO 10 0.71 A TYR 11 A TYR 9 7 A PRO 12 A PRO 10 0.37 A TYR 11 A TYR 9 8 A PRO 12 A PRO 10 0.05 A TYR 11 A TYR 9 9 A PRO 12 A PRO 10 0.73 A TYR 11 A TYR 9 10 A PRO 12 A PRO 10 0.35 A TYR 11 A TYR 9 11 A PRO 12 A PRO 10 0.19 A TYR 11 A TYR 9 12 A PRO 12 A PRO 10 0.01 A TYR 11 A TYR 9 13 A PRO 12 A PRO 10 -0.01 A TYR 11 A TYR 9 14 A PRO 12 A PRO 10 1.51 A TYR 11 A TYR 9 15 A PRO 12 A PRO 10 0.82 IOVO_LOPNY UNP 1 3 P67954 AVSVDCSEYPKPACTMEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC 3 56 1IY5 3 56 P67954 A 1 1 54 3 anti-parallel anti-parallel A LYS 29 A LYS 27 A TYR 31 A TYR 29 A LEU 23 A LEU 21 A GLY 25 A GLY 23 A LEU 50 A LEU 48 A HIS 52 A HIS 50