0.013959
0.000000
0.000000
0.000000
0.011360
0.000000
0.000000
0.000000
0.008426
0.00000
0.00000
0.00000
Hirose, R.
Hasegawa, T.
Yamano, A.
Kuramitsu, S.
Hamada, K.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
71.640
88.030
118.680
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
To be published
0353
Crystal Structure of Malate Dehydrogenase from Thermus themrophilus HB8
10.2210/pdb1iz9/pdb
pdb_00001iz9
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
Osmic Confocal Max-Flux Optics
IMAGE PLATE
2002-04-15
RIGAKU RAXIS VII
Osmic Max-Flux Optics
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU MICROMAX-007
35466.785
MALATE DEHYDROGENASE
1.1.1.37
2
man
polymer
18.015
water
152
nat
water
no
no
MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKD
ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDH
NRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQARGASSAAS
AANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEMEQ
VKALGLI
MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKD
ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDH
NRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQARGASSAAS
AANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEMEQ
VKALGLI
A,B
ttk003000544.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermus
Escherichia
sample
274
Thermus thermophilus
562
Escherichia coli
plasmid
pET11a
1
2.64
53.35
VAPOR DIFFUSION, HANGING DROP
8.5
PEG MME 2000, Nickel Chloride, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
RIKEN Structural Genomics/Proteomics Initiative
RSGI
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Structure summary
Data collection
Database references
Refinement description
1
0
2002-10-16
1
1
2008-04-27
1
2
2011-07-13
1
3
2014-11-12
1
4
2023-10-25
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Y
PDBJ
Y
PDBJ
2002-10-01
REL
REL
HOH
water
1BMD
PDB ENTRY 1BMD
PDB
experimental model
WAT
1
2
HOH
HOH
328
A
WAT
4
2
HOH
HOH
329
A
WAT
5
2
HOH
HOH
330
A
WAT
6
2
HOH
HOH
331
A
WAT
7
2
HOH
HOH
332
A
WAT
8
2
HOH
HOH
333
A
WAT
10
2
HOH
HOH
334
A
WAT
11
2
HOH
HOH
335
A
WAT
12
2
HOH
HOH
336
A
WAT
15
2
HOH
HOH
337
A
WAT
18
2
HOH
HOH
338
A
WAT
22
2
HOH
HOH
339
A
WAT
24
2
HOH
HOH
340
A
WAT
26
2
HOH
HOH
341
A
WAT
27
2
HOH
HOH
342
A
WAT
28
2
HOH
HOH
343
A
WAT
30
2
HOH
HOH
344
A
WAT
32
2
HOH
HOH
345
A
WAT
33
2
HOH
HOH
346
A
WAT
35
2
HOH
HOH
347
A
WAT
37
2
HOH
HOH
348
A
WAT
41
2
HOH
HOH
349
A
WAT
45
2
HOH
HOH
350
A
WAT
46
2
HOH
HOH
351
A
WAT
48
2
HOH
HOH
352
A
WAT
50
2
HOH
HOH
353
A
WAT
51
2
HOH
HOH
354
A
WAT
55
2
HOH
HOH
355
A
WAT
56
2
HOH
HOH
356
A
WAT
59
2
HOH
HOH
357
A
WAT
63
2
HOH
HOH
358
A
WAT
64
2
HOH
HOH
359
A
WAT
66
2
HOH
HOH
360
A
WAT
67
2
HOH
HOH
361
A
WAT
68
2
HOH
HOH
362
A
WAT
70
2
HOH
HOH
363
A
WAT
73
2
HOH
HOH
364
A
WAT
74
2
HOH
HOH
365
A
WAT
75
2
HOH
HOH
366
A
WAT
76
2
HOH
HOH
367
A
WAT
78
2
HOH
HOH
368
A
WAT
80
2
HOH
HOH
369
A
WAT
81
2
HOH
HOH
370
A
WAT
83
2
HOH
HOH
371
A
WAT
85
2
HOH
HOH
372
A
WAT
86
2
HOH
HOH
373
A
WAT
87
2
HOH
HOH
374
A
WAT
88
2
HOH
HOH
375
A
WAT
90
2
HOH
HOH
376
A
WAT
91
2
HOH
HOH
377
A
WAT
92
2
HOH
HOH
378
A
WAT
93
2
HOH
HOH
379
A
WAT
94
2
HOH
HOH
380
A
WAT
98
2
HOH
HOH
381
A
WAT
99
2
HOH
HOH
382
A
WAT
101
2
HOH
HOH
383
A
WAT
102
2
HOH
HOH
384
A
WAT
104
2
HOH
HOH
385
A
WAT
108
2
HOH
HOH
386
A
WAT
111
2
HOH
HOH
387
A
WAT
113
2
HOH
HOH
388
A
WAT
116
2
HOH
HOH
389
A
WAT
117
2
HOH
HOH
390
A
WAT
118
2
HOH
HOH
391
A
WAT
120
2
HOH
HOH
392
A
WAT
121
2
HOH
HOH
393
A
WAT
122
2
HOH
HOH
394
A
WAT
123
2
HOH
HOH
395
A
WAT
125
2
HOH
HOH
396
A
WAT
126
2
HOH
HOH
397
A
WAT
129
2
HOH
HOH
398
A
WAT
132
2
HOH
HOH
399
A
WAT
133
2
HOH
HOH
400
A
WAT
134
2
HOH
HOH
401
A
WAT
135
2
HOH
HOH
402
A
WAT
137
2
HOH
HOH
403
A
WAT
139
2
HOH
HOH
404
A
WAT
142
2
HOH
HOH
405
A
WAT
144
2
HOH
HOH
406
A
WAT
145
2
HOH
HOH
407
A
WAT
146
2
HOH
HOH
408
A
WAT
147
2
HOH
HOH
409
A
WAT
148
2
HOH
HOH
410
A
WAT
149
2
HOH
HOH
411
A
WAT
151
2
HOH
HOH
412
A
WAT
152
2
HOH
HOH
413
A
WAT
2
2
HOH
HOH
328
B
WAT
3
2
HOH
HOH
329
B
WAT
9
2
HOH
HOH
330
B
WAT
13
2
HOH
HOH
331
B
WAT
14
2
HOH
HOH
332
B
WAT
16
2
HOH
HOH
333
B
WAT
17
2
HOH
HOH
334
B
WAT
19
2
HOH
HOH
335
B
WAT
20
2
HOH
HOH
336
B
WAT
21
2
HOH
HOH
337
B
WAT
23
2
HOH
HOH
338
B
WAT
25
2
HOH
HOH
339
B
WAT
29
2
HOH
HOH
340
B
WAT
31
2
HOH
HOH
341
B
WAT
34
2
HOH
HOH
342
B
WAT
36
2
HOH
HOH
343
B
WAT
38
2
HOH
HOH
344
B
WAT
39
2
HOH
HOH
345
B
WAT
40
2
HOH
HOH
346
B
WAT
42
2
HOH
HOH
347
B
WAT
43
2
HOH
HOH
348
B
WAT
44
2
HOH
HOH
349
B
WAT
47
2
HOH
HOH
350
B
WAT
49
2
HOH
HOH
351
B
WAT
52
2
HOH
HOH
352
B
WAT
53
2
HOH
HOH
353
B
WAT
54
2
HOH
HOH
354
B
WAT
57
2
HOH
HOH
355
B
WAT
58
2
HOH
HOH
356
B
WAT
60
2
HOH
HOH
357
B
WAT
61
2
HOH
HOH
358
B
WAT
62
2
HOH
HOH
359
B
WAT
65
2
HOH
HOH
360
B
WAT
69
2
HOH
HOH
361
B
WAT
71
2
HOH
HOH
362
B
WAT
72
2
HOH
HOH
363
B
WAT
77
2
HOH
HOH
364
B
WAT
79
2
HOH
HOH
365
B
WAT
82
2
HOH
HOH
366
B
WAT
84
2
HOH
HOH
367
B
WAT
89
2
HOH
HOH
368
B
WAT
95
2
HOH
HOH
369
B
WAT
96
2
HOH
HOH
370
B
WAT
97
2
HOH
HOH
371
B
WAT
100
2
HOH
HOH
372
B
WAT
103
2
HOH
HOH
373
B
WAT
105
2
HOH
HOH
374
B
WAT
106
2
HOH
HOH
375
B
WAT
107
2
HOH
HOH
376
B
WAT
109
2
HOH
HOH
377
B
WAT
110
2
HOH
HOH
378
B
WAT
112
2
HOH
HOH
379
B
WAT
114
2
HOH
HOH
380
B
WAT
115
2
HOH
HOH
381
B
WAT
119
2
HOH
HOH
382
B
WAT
124
2
HOH
HOH
383
B
WAT
127
2
HOH
HOH
384
B
WAT
128
2
HOH
HOH
385
B
WAT
130
2
HOH
HOH
386
B
WAT
131
2
HOH
HOH
387
B
WAT
136
2
HOH
HOH
388
B
WAT
138
2
HOH
HOH
389
B
WAT
140
2
HOH
HOH
390
B
WAT
141
2
HOH
HOH
391
B
WAT
143
2
HOH
HOH
392
B
WAT
150
2
HOH
HOH
393
B
MET
1
n
1
MET
1
A
LYS
2
n
2
LYS
2
A
ALA
3
n
3
ALA
3
A
PRO
4
n
4
PRO
4
A
VAL
5
n
5
VAL
5
A
ARG
6
n
6
ARG
6
A
VAL
7
n
7
VAL
7
A
ALA
8
n
8
ALA
8
A
VAL
9
n
9
VAL
9
A
THR
10
n
10
THR
10
A
GLY
11
n
11
GLY
11
A
ALA
12
n
12
ALA
12
A
ALA
13
n
13
ALA
13
A
GLY
14
n
14
GLY
14
A
GLN
15
n
15
GLN
15
A
ILE
16
n
16
ILE
16
A
GLY
17
n
17
GLY
17
A
TYR
18
n
18
TYR
18
A
SER
19
n
19
SER
19
A
LEU
20
n
20
LEU
20
A
LEU
21
n
21
LEU
21
A
PHE
22
n
22
PHE
22
A
ARG
23
n
23
ARG
23
A
ILE
24
n
24
ILE
24
A
ALA
25
n
25
ALA
25
A
ALA
26
n
26
ALA
26
A
GLY
27
n
27
GLY
27
A
GLU
28
n
28
GLU
28
A
MET
29
n
29
MET
29
A
LEU
30
n
30
LEU
30
A
GLY
31
n
31
GLY
31
A
LYS
32
n
32
LYS
32
A
ASP
33
n
33
ASP
33
A
GLN
34
n
34
GLN
34
A
PRO
35
n
35
PRO
35
A
VAL
36
n
36
VAL
36
A
ILE
37
n
37
ILE
37
A
LEU
38
n
38
LEU
38
A
GLN
39
n
39
GLN
39
A
LEU
40
n
40
LEU
40
A
LEU
41
n
41
LEU
41
A
GLU
42
n
42
GLU
42
A
ILE
43
n
43
ILE
43
A
PRO
44
n
44
PRO
44
A
GLN
45
n
45
GLN
45
A
ALA
46
n
46
ALA
46
A
MET
47
n
47
MET
47
A
LYS
48
n
48
LYS
48
A
ALA
49
n
49
ALA
49
A
LEU
50
n
50
LEU
50
A
GLU
51
n
51
GLU
51
A
GLY
52
n
52
GLY
52
A
VAL
53
n
53
VAL
53
A
VAL
54
n
54
VAL
54
A
MET
55
n
55
MET
55
A
GLU
56
n
56
GLU
56
A
LEU
57
n
57
LEU
57
A
GLU
58
n
58
GLU
58
A
ASP
59
n
59
ASP
59
A
CYS
60
n
60
CYS
60
A
ALA
61
n
61
ALA
61
A
PHE
62
n
62
PHE
62
A
PRO
63
n
63
PRO
63
A
LEU
64
n
64
LEU
64
A
LEU
65
n
65
LEU
65
A
ALA
66
n
66
ALA
66
A
GLY
67
n
67
GLY
67
A
LEU
68
n
68
LEU
68
A
GLU
69
n
69
GLU
69
A
ALA
70
n
70
ALA
70
A
THR
71
n
71
THR
71
A
ASP
72
n
72
ASP
72
A
ASP
73
n
73
ASP
73
A
PRO
74
n
74
PRO
74
A
LYS
75
n
75
LYS
75
A
VAL
76
n
76
VAL
76
A
ALA
77
n
77
ALA
77
A
PHE
78
n
78
PHE
78
A
LYS
79
n
79
LYS
79
A
ASP
80
n
80
ASP
80
A
ALA
81
n
81
ALA
81
A
ASP
82
n
82
ASP
82
A
TYR
83
n
83
TYR
83
A
ALA
84
n
84
ALA
84
A
LEU
85
n
85
LEU
85
A
LEU
86
n
86
LEU
86
A
VAL
87
n
87
VAL
87
A
GLY
88
n
88
GLY
88
A
ALA
89
n
89
ALA
89
A
ALA
90
n
90
ALA
90
A
PRO
91
n
91
PRO
91
A
ARG
92
n
92
ARG
92
A
LYS
93
n
93
LYS
93
A
ALA
94
n
94
ALA
94
A
GLY
95
n
95
GLY
95
A
MET
96
n
96
MET
96
A
GLU
97
n
97
GLU
97
A
ARG
98
n
98
ARG
98
A
ARG
99
n
99
ARG
99
A
ASP
100
n
100
ASP
100
A
LEU
101
n
101
LEU
101
A
LEU
102
n
102
LEU
102
A
GLN
103
n
103
GLN
103
A
VAL
104
n
104
VAL
104
A
ASN
105
n
105
ASN
105
A
GLY
106
n
106
GLY
106
A
LYS
107
n
107
LYS
107
A
ILE
108
n
108
ILE
108
A
PHE
109
n
109
PHE
109
A
THR
110
n
110
THR
110
A
GLU
111
n
111
GLU
111
A
GLN
112
n
112
GLN
112
A
GLY
113
n
113
GLY
113
A
ARG
114
n
114
ARG
114
A
ALA
115
n
115
ALA
115
A
LEU
116
n
116
LEU
116
A
ALA
117
n
117
ALA
117
A
GLU
118
n
118
GLU
118
A
VAL
119
n
119
VAL
119
A
ALA
120
n
120
ALA
120
A
LYS
121
n
121
LYS
121
A
LYS
122
n
122
LYS
122
A
ASP
123
n
123
ASP
123
A
VAL
124
n
124
VAL
124
A
LYS
125
n
125
LYS
125
A
VAL
126
n
126
VAL
126
A
LEU
127
n
127
LEU
127
A
VAL
128
n
128
VAL
128
A
VAL
129
n
129
VAL
129
A
GLY
130
n
130
GLY
130
A
ASN
131
n
131
ASN
131
A
PRO
132
n
132
PRO
132
A
ALA
133
n
133
ALA
133
A
ASN
134
n
134
ASN
134
A
THR
135
n
135
THR
135
A
ASN
136
n
136
ASN
136
A
ALA
137
n
137
ALA
137
A
LEU
138
n
138
LEU
138
A
ILE
139
n
139
ILE
139
A
ALA
140
n
140
ALA
140
A
TYR
141
n
141
TYR
141
A
LYS
142
n
142
LYS
142
A
ASN
143
n
143
ASN
143
A
ALA
144
n
144
ALA
144
A
PRO
145
n
145
PRO
145
A
GLY
146
n
146
GLY
146
A
LEU
147
n
147
LEU
147
A
ASN
148
n
148
ASN
148
A
PRO
149
n
149
PRO
149
A
ARG
150
n
150
ARG
150
A
ASN
151
n
151
ASN
151
A
PHE
152
n
152
PHE
152
A
THR
153
n
153
THR
153
A
ALA
154
n
154
ALA
154
A
MET
155
n
155
MET
155
A
THR
156
n
156
THR
156
A
ARG
157
n
157
ARG
157
A
LEU
158
n
158
LEU
158
A
ASP
159
n
159
ASP
159
A
HIS
160
n
160
HIS
160
A
ASN
161
n
161
ASN
161
A
ARG
162
n
162
ARG
162
A
ALA
163
n
163
ALA
163
A
LYS
164
n
164
LYS
164
A
ALA
165
n
165
ALA
165
A
GLN
166
n
166
GLN
166
A
LEU
167
n
167
LEU
167
A
ALA
168
n
168
ALA
168
A
LYS
169
n
169
LYS
169
A
LYS
170
n
170
LYS
170
A
THR
171
n
171
THR
171
A
GLY
172
n
172
GLY
172
A
THR
173
n
173
THR
173
A
GLY
174
n
174
GLY
174
A
VAL
175
n
175
VAL
175
A
ASP
176
n
176
ASP
176
A
ARG
177
n
177
ARG
177
A
ILE
178
n
178
ILE
178
A
ARG
179
n
179
ARG
179
A
ARG
180
n
180
ARG
180
A
MET
181
n
181
MET
181
A
THR
182
n
182
THR
182
A
VAL
183
n
183
VAL
183
A
TRP
184
n
184
TRP
184
A
GLY
185
n
185
GLY
185
A
ASN
186
n
186
ASN
186
A
HIS
187
n
187
HIS
187
A
SER
188
n
188
SER
188
A
SER
189
n
189
SER
189
A
THR
190
n
190
THR
190
A
MET
191
n
191
MET
191
A
PHE
192
n
192
PHE
192
A
PRO
193
n
193
PRO
193
A
ASP
194
n
194
ASP
194
A
LEU
195
n
195
LEU
195
A
PHE
196
n
196
PHE
196
A
HIS
197
n
197
HIS
197
A
ALA
198
n
198
ALA
198
A
GLU
199
n
199
GLU
199
A
VAL
200
n
200
VAL
200
A
ASP
201
n
201
ASP
201
A
GLY
202
n
202
GLY
202
A
ARG
203
n
203
ARG
203
A
PRO
204
n
204
PRO
204
A
ALA
205
n
205
ALA
205
A
LEU
206
n
206
LEU
206
A
GLU
207
n
207
GLU
207
A
LEU
208
n
208
LEU
208
A
VAL
209
n
209
VAL
209
A
ASP
210
n
210
ASP
210
A
MET
211
n
211
MET
211
A
GLU
212
n
212
GLU
212
A
TRP
213
n
213
TRP
213
A
TYR
214
n
214
TYR
214
A
GLU
215
n
215
GLU
215
A
LYS
216
n
216
LYS
216
A
VAL
217
n
217
VAL
217
A
PHE
218
n
218
PHE
218
A
ILE
219
n
219
ILE
219
A
PRO
220
n
220
PRO
220
A
THR
221
n
221
THR
221
A
VAL
222
n
222
VAL
222
A
ALA
223
n
223
ALA
223
A
GLN
224
n
224
GLN
224
A
ARG
225
n
225
ARG
225
A
GLY
226
n
226
GLY
226
A
ALA
227
n
227
ALA
227
A
ALA
228
n
228
ALA
228
A
ILE
229
n
229
ILE
229
A
ILE
230
n
230
ILE
230
A
GLN
231
n
231
GLN
231
A
ALA
232
n
232
ALA
232
A
ARG
233
n
233
ARG
233
A
GLY
234
n
234
GLY
234
A
ALA
235
n
235
ALA
235
A
SER
236
n
236
SER
236
A
SER
237
n
237
SER
237
A
ALA
238
n
238
ALA
238
A
ALA
239
n
239
ALA
239
A
SER
240
n
240
SER
240
A
ALA
241
n
241
ALA
241
A
ALA
242
n
242
ALA
242
A
ASN
243
n
243
ASN
243
A
ALA
244
n
244
ALA
244
A
ALA
245
n
245
ALA
245
A
ILE
246
n
246
ILE
246
A
GLU
247
n
247
GLU
247
A
HIS
248
n
248
HIS
248
A
ILE
249
n
249
ILE
249
A
ARG
250
n
250
ARG
250
A
ASP
251
n
251
ASP
251
A
TRP
252
n
252
TRP
252
A
ALA
253
n
253
ALA
253
A
LEU
254
n
254
LEU
254
A
GLY
255
n
255
GLY
255
A
THR
256
n
256
THR
256
A
PRO
257
n
257
PRO
257
A
GLU
258
n
258
GLU
258
A
GLY
259
n
259
GLY
259
A
ASP
260
n
260
ASP
260
A
TRP
261
n
261
TRP
261
A
VAL
262
n
262
VAL
262
A
SER
263
n
263
SER
263
A
MET
264
n
264
MET
264
A
ALA
265
n
265
ALA
265
A
VAL
266
n
266
VAL
266
A
PRO
267
n
267
PRO
267
A
SER
268
n
268
SER
268
A
GLN
269
n
269
GLN
269
A
GLY
270
n
270
GLY
270
A
GLU
271
n
271
GLU
271
A
TYR
272
n
272
TYR
272
A
GLY
273
n
273
GLY
273
A
ILE
274
n
274
ILE
274
A
PRO
275
n
275
PRO
275
A
GLU
276
n
276
GLU
276
A
GLY
277
n
277
GLY
277
A
ILE
278
n
278
ILE
278
A
VAL
279
n
279
VAL
279
A
TYR
280
n
280
TYR
280
A
SER
281
n
281
SER
281
A
PHE
282
n
282
PHE
282
A
PRO
283
n
283
PRO
283
A
VAL
284
n
284
VAL
284
A
THR
285
n
285
THR
285
A
ALA
286
n
286
ALA
286
A
LYS
287
n
287
LYS
287
A
ASP
288
n
288
ASP
288
A
GLY
289
n
289
GLY
289
A
ALA
290
n
290
ALA
290
A
TYR
291
n
291
TYR
291
A
ARG
292
n
292
ARG
292
A
VAL
293
n
293
VAL
293
A
VAL
294
n
294
VAL
294
A
GLU
295
n
295
GLU
295
A
GLY
296
n
296
GLY
296
A
LEU
297
n
297
LEU
297
A
GLU
298
n
298
GLU
298
A
ILE
299
n
299
ILE
299
A
ASN
300
n
300
ASN
300
A
GLU
301
n
301
GLU
301
A
PHE
302
n
302
PHE
302
A
ALA
303
n
303
ALA
303
A
ARG
304
n
304
ARG
304
A
LYS
305
n
305
LYS
305
A
ARG
306
n
306
ARG
306
A
MET
307
n
307
MET
307
A
GLU
308
n
308
GLU
308
A
ILE
309
n
309
ILE
309
A
THR
310
n
310
THR
310
A
ALA
311
n
311
ALA
311
A
GLN
312
n
312
GLN
312
A
GLU
313
n
313
GLU
313
A
LEU
314
n
314
LEU
314
A
LEU
315
n
315
LEU
315
A
ASP
316
n
316
ASP
316
A
GLU
317
n
317
GLU
317
A
MET
318
n
318
MET
318
A
GLU
319
n
319
GLU
319
A
GLN
320
n
320
GLN
320
A
VAL
321
n
321
VAL
321
A
LYS
322
n
322
LYS
322
A
ALA
323
n
323
ALA
323
A
LEU
324
n
324
LEU
324
A
GLY
325
n
325
GLY
325
A
LEU
326
n
326
LEU
326
A
ILE
327
n
327
ILE
327
A
MET
1
n
1
MET
1
B
LYS
2
n
2
LYS
2
B
ALA
3
n
3
ALA
3
B
PRO
4
n
4
PRO
4
B
VAL
5
n
5
VAL
5
B
ARG
6
n
6
ARG
6
B
VAL
7
n
7
VAL
7
B
ALA
8
n
8
ALA
8
B
VAL
9
n
9
VAL
9
B
THR
10
n
10
THR
10
B
GLY
11
n
11
GLY
11
B
ALA
12
n
12
ALA
12
B
ALA
13
n
13
ALA
13
B
GLY
14
n
14
GLY
14
B
GLN
15
n
15
GLN
15
B
ILE
16
n
16
ILE
16
B
GLY
17
n
17
GLY
17
B
TYR
18
n
18
TYR
18
B
SER
19
n
19
SER
19
B
LEU
20
n
20
LEU
20
B
LEU
21
n
21
LEU
21
B
PHE
22
n
22
PHE
22
B
ARG
23
n
23
ARG
23
B
ILE
24
n
24
ILE
24
B
ALA
25
n
25
ALA
25
B
ALA
26
n
26
ALA
26
B
GLY
27
n
27
GLY
27
B
GLU
28
n
28
GLU
28
B
MET
29
n
29
MET
29
B
LEU
30
n
30
LEU
30
B
GLY
31
n
31
GLY
31
B
LYS
32
n
32
LYS
32
B
ASP
33
n
33
ASP
33
B
GLN
34
n
34
GLN
34
B
PRO
35
n
35
PRO
35
B
VAL
36
n
36
VAL
36
B
ILE
37
n
37
ILE
37
B
LEU
38
n
38
LEU
38
B
GLN
39
n
39
GLN
39
B
LEU
40
n
40
LEU
40
B
LEU
41
n
41
LEU
41
B
GLU
42
n
42
GLU
42
B
ILE
43
n
43
ILE
43
B
PRO
44
n
44
PRO
44
B
GLN
45
n
45
GLN
45
B
ALA
46
n
46
ALA
46
B
MET
47
n
47
MET
47
B
LYS
48
n
48
LYS
48
B
ALA
49
n
49
ALA
49
B
LEU
50
n
50
LEU
50
B
GLU
51
n
51
GLU
51
B
GLY
52
n
52
GLY
52
B
VAL
53
n
53
VAL
53
B
VAL
54
n
54
VAL
54
B
MET
55
n
55
MET
55
B
GLU
56
n
56
GLU
56
B
LEU
57
n
57
LEU
57
B
GLU
58
n
58
GLU
58
B
ASP
59
n
59
ASP
59
B
CYS
60
n
60
CYS
60
B
ALA
61
n
61
ALA
61
B
PHE
62
n
62
PHE
62
B
PRO
63
n
63
PRO
63
B
LEU
64
n
64
LEU
64
B
LEU
65
n
65
LEU
65
B
ALA
66
n
66
ALA
66
B
GLY
67
n
67
GLY
67
B
LEU
68
n
68
LEU
68
B
GLU
69
n
69
GLU
69
B
ALA
70
n
70
ALA
70
B
THR
71
n
71
THR
71
B
ASP
72
n
72
ASP
72
B
ASP
73
n
73
ASP
73
B
PRO
74
n
74
PRO
74
B
LYS
75
n
75
LYS
75
B
VAL
76
n
76
VAL
76
B
ALA
77
n
77
ALA
77
B
PHE
78
n
78
PHE
78
B
LYS
79
n
79
LYS
79
B
ASP
80
n
80
ASP
80
B
ALA
81
n
81
ALA
81
B
ASP
82
n
82
ASP
82
B
TYR
83
n
83
TYR
83
B
ALA
84
n
84
ALA
84
B
LEU
85
n
85
LEU
85
B
LEU
86
n
86
LEU
86
B
VAL
87
n
87
VAL
87
B
GLY
88
n
88
GLY
88
B
ALA
89
n
89
ALA
89
B
ALA
90
n
90
ALA
90
B
PRO
91
n
91
PRO
91
B
ARG
92
n
92
ARG
92
B
LYS
93
n
93
LYS
93
B
ALA
94
n
94
ALA
94
B
GLY
95
n
95
GLY
95
B
MET
96
n
96
MET
96
B
GLU
97
n
97
GLU
97
B
ARG
98
n
98
ARG
98
B
ARG
99
n
99
ARG
99
B
ASP
100
n
100
ASP
100
B
LEU
101
n
101
LEU
101
B
LEU
102
n
102
LEU
102
B
GLN
103
n
103
GLN
103
B
VAL
104
n
104
VAL
104
B
ASN
105
n
105
ASN
105
B
GLY
106
n
106
GLY
106
B
LYS
107
n
107
LYS
107
B
ILE
108
n
108
ILE
108
B
PHE
109
n
109
PHE
109
B
THR
110
n
110
THR
110
B
GLU
111
n
111
GLU
111
B
GLN
112
n
112
GLN
112
B
GLY
113
n
113
GLY
113
B
ARG
114
n
114
ARG
114
B
ALA
115
n
115
ALA
115
B
LEU
116
n
116
LEU
116
B
ALA
117
n
117
ALA
117
B
GLU
118
n
118
GLU
118
B
VAL
119
n
119
VAL
119
B
ALA
120
n
120
ALA
120
B
LYS
121
n
121
LYS
121
B
LYS
122
n
122
LYS
122
B
ASP
123
n
123
ASP
123
B
VAL
124
n
124
VAL
124
B
LYS
125
n
125
LYS
125
B
VAL
126
n
126
VAL
126
B
LEU
127
n
127
LEU
127
B
VAL
128
n
128
VAL
128
B
VAL
129
n
129
VAL
129
B
GLY
130
n
130
GLY
130
B
ASN
131
n
131
ASN
131
B
PRO
132
n
132
PRO
132
B
ALA
133
n
133
ALA
133
B
ASN
134
n
134
ASN
134
B
THR
135
n
135
THR
135
B
ASN
136
n
136
ASN
136
B
ALA
137
n
137
ALA
137
B
LEU
138
n
138
LEU
138
B
ILE
139
n
139
ILE
139
B
ALA
140
n
140
ALA
140
B
TYR
141
n
141
TYR
141
B
LYS
142
n
142
LYS
142
B
ASN
143
n
143
ASN
143
B
ALA
144
n
144
ALA
144
B
PRO
145
n
145
PRO
145
B
GLY
146
n
146
GLY
146
B
LEU
147
n
147
LEU
147
B
ASN
148
n
148
ASN
148
B
PRO
149
n
149
PRO
149
B
ARG
150
n
150
ARG
150
B
ASN
151
n
151
ASN
151
B
PHE
152
n
152
PHE
152
B
THR
153
n
153
THR
153
B
ALA
154
n
154
ALA
154
B
MET
155
n
155
MET
155
B
THR
156
n
156
THR
156
B
ARG
157
n
157
ARG
157
B
LEU
158
n
158
LEU
158
B
ASP
159
n
159
ASP
159
B
HIS
160
n
160
HIS
160
B
ASN
161
n
161
ASN
161
B
ARG
162
n
162
ARG
162
B
ALA
163
n
163
ALA
163
B
LYS
164
n
164
LYS
164
B
ALA
165
n
165
ALA
165
B
GLN
166
n
166
GLN
166
B
LEU
167
n
167
LEU
167
B
ALA
168
n
168
ALA
168
B
LYS
169
n
169
LYS
169
B
LYS
170
n
170
LYS
170
B
THR
171
n
171
THR
171
B
GLY
172
n
172
GLY
172
B
THR
173
n
173
THR
173
B
GLY
174
n
174
GLY
174
B
VAL
175
n
175
VAL
175
B
ASP
176
n
176
ASP
176
B
ARG
177
n
177
ARG
177
B
ILE
178
n
178
ILE
178
B
ARG
179
n
179
ARG
179
B
ARG
180
n
180
ARG
180
B
MET
181
n
181
MET
181
B
THR
182
n
182
THR
182
B
VAL
183
n
183
VAL
183
B
TRP
184
n
184
TRP
184
B
GLY
185
n
185
GLY
185
B
ASN
186
n
186
ASN
186
B
HIS
187
n
187
HIS
187
B
SER
188
n
188
SER
188
B
SER
189
n
189
SER
189
B
THR
190
n
190
THR
190
B
MET
191
n
191
MET
191
B
PHE
192
n
192
PHE
192
B
PRO
193
n
193
PRO
193
B
ASP
194
n
194
ASP
194
B
LEU
195
n
195
LEU
195
B
PHE
196
n
196
PHE
196
B
HIS
197
n
197
HIS
197
B
ALA
198
n
198
ALA
198
B
GLU
199
n
199
GLU
199
B
VAL
200
n
200
VAL
200
B
ASP
201
n
201
ASP
201
B
GLY
202
n
202
GLY
202
B
ARG
203
n
203
ARG
203
B
PRO
204
n
204
PRO
204
B
ALA
205
n
205
ALA
205
B
LEU
206
n
206
LEU
206
B
GLU
207
n
207
GLU
207
B
LEU
208
n
208
LEU
208
B
VAL
209
n
209
VAL
209
B
ASP
210
n
210
ASP
210
B
MET
211
n
211
MET
211
B
GLU
212
n
212
GLU
212
B
TRP
213
n
213
TRP
213
B
TYR
214
n
214
TYR
214
B
GLU
215
n
215
GLU
215
B
LYS
216
n
216
LYS
216
B
VAL
217
n
217
VAL
217
B
PHE
218
n
218
PHE
218
B
ILE
219
n
219
ILE
219
B
PRO
220
n
220
PRO
220
B
THR
221
n
221
THR
221
B
VAL
222
n
222
VAL
222
B
ALA
223
n
223
ALA
223
B
GLN
224
n
224
GLN
224
B
ARG
225
n
225
ARG
225
B
GLY
226
n
226
GLY
226
B
ALA
227
n
227
ALA
227
B
ALA
228
n
228
ALA
228
B
ILE
229
n
229
ILE
229
B
ILE
230
n
230
ILE
230
B
GLN
231
n
231
GLN
231
B
ALA
232
n
232
ALA
232
B
ARG
233
n
233
ARG
233
B
GLY
234
n
234
GLY
234
B
ALA
235
n
235
ALA
235
B
SER
236
n
236
SER
236
B
SER
237
n
237
SER
237
B
ALA
238
n
238
ALA
238
B
ALA
239
n
239
ALA
239
B
SER
240
n
240
SER
240
B
ALA
241
n
241
ALA
241
B
ALA
242
n
242
ALA
242
B
ASN
243
n
243
ASN
243
B
ALA
244
n
244
ALA
244
B
ALA
245
n
245
ALA
245
B
ILE
246
n
246
ILE
246
B
GLU
247
n
247
GLU
247
B
HIS
248
n
248
HIS
248
B
ILE
249
n
249
ILE
249
B
ARG
250
n
250
ARG
250
B
ASP
251
n
251
ASP
251
B
TRP
252
n
252
TRP
252
B
ALA
253
n
253
ALA
253
B
LEU
254
n
254
LEU
254
B
GLY
255
n
255
GLY
255
B
THR
256
n
256
THR
256
B
PRO
257
n
257
PRO
257
B
GLU
258
n
258
GLU
258
B
GLY
259
n
259
GLY
259
B
ASP
260
n
260
ASP
260
B
TRP
261
n
261
TRP
261
B
VAL
262
n
262
VAL
262
B
SER
263
n
263
SER
263
B
MET
264
n
264
MET
264
B
ALA
265
n
265
ALA
265
B
VAL
266
n
266
VAL
266
B
PRO
267
n
267
PRO
267
B
SER
268
n
268
SER
268
B
GLN
269
n
269
GLN
269
B
GLY
270
n
270
GLY
270
B
GLU
271
n
271
GLU
271
B
TYR
272
n
272
TYR
272
B
GLY
273
n
273
GLY
273
B
ILE
274
n
274
ILE
274
B
PRO
275
n
275
PRO
275
B
GLU
276
n
276
GLU
276
B
GLY
277
n
277
GLY
277
B
ILE
278
n
278
ILE
278
B
VAL
279
n
279
VAL
279
B
TYR
280
n
280
TYR
280
B
SER
281
n
281
SER
281
B
PHE
282
n
282
PHE
282
B
PRO
283
n
283
PRO
283
B
VAL
284
n
284
VAL
284
B
THR
285
n
285
THR
285
B
ALA
286
n
286
ALA
286
B
LYS
287
n
287
LYS
287
B
ASP
288
n
288
ASP
288
B
GLY
289
n
289
GLY
289
B
ALA
290
n
290
ALA
290
B
TYR
291
n
291
TYR
291
B
ARG
292
n
292
ARG
292
B
VAL
293
n
293
VAL
293
B
VAL
294
n
294
VAL
294
B
GLU
295
n
295
GLU
295
B
GLY
296
n
296
GLY
296
B
LEU
297
n
297
LEU
297
B
GLU
298
n
298
GLU
298
B
ILE
299
n
299
ILE
299
B
ASN
300
n
300
ASN
300
B
GLU
301
n
301
GLU
301
B
PHE
302
n
302
PHE
302
B
ALA
303
n
303
ALA
303
B
ARG
304
n
304
ARG
304
B
LYS
305
n
305
LYS
305
B
ARG
306
n
306
ARG
306
B
MET
307
n
307
MET
307
B
GLU
308
n
308
GLU
308
B
ILE
309
n
309
ILE
309
B
THR
310
n
310
THR
310
B
ALA
311
n
311
ALA
311
B
GLN
312
n
312
GLN
312
B
GLU
313
n
313
GLU
313
B
LEU
314
n
314
LEU
314
B
LEU
315
n
315
LEU
315
B
ASP
316
n
316
ASP
316
B
GLU
317
n
317
GLU
317
B
MET
318
n
318
MET
318
B
GLU
319
n
319
GLU
319
B
GLN
320
n
320
GLN
320
B
VAL
321
n
321
VAL
321
B
LYS
322
n
322
LYS
322
B
ALA
323
n
323
ALA
323
B
LEU
324
n
324
LEU
324
B
GLY
325
n
325
GLY
325
B
LEU
326
n
326
LEU
326
B
ILE
327
n
327
ILE
327
B
author_and_software_defined_assembly
PISA
2
dimeric
3220
-17
25990
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLU
69
A
O
GLU
69
A
N
LEU
40
A
N
LEU
40
A
O
ILE
37
A
O
ILE
37
A
N
VAL
7
A
N
VAL
7
A
N
ALA
8
A
N
ALA
8
A
O
LEU
85
A
O
LEU
85
A
N
LEU
86
A
N
LEU
86
A
O
LEU
127
A
O
LEU
127
A
N
VAL
128
A
N
VAL
128
A
O
THR
153
A
O
THR
153
A
N
ARG
179
A
N
ARG
179
A
O
GLU
199
A
O
GLU
199
A
N
VAL
200
A
N
VAL
200
A
O
ARG
203
A
O
ARG
203
A
N
THR
182
A
N
THR
182
A
O
ASP
194
A
O
ASP
194
A
N
VAL
262
A
N
VAL
262
A
O
VAL
284
A
O
VAL
284
A
N
LYS
287
A
N
LYS
287
A
O
ALA
290
A
O
ALA
290
B
O
GLU
69
B
O
GLU
69
B
N
LEU
40
B
N
LEU
40
B
O
ILE
37
B
O
ILE
37
B
N
VAL
7
B
N
VAL
7
B
N
ALA
8
B
N
ALA
8
B
O
LEU
85
B
O
LEU
85
B
N
ALA
84
B
N
ALA
84
B
O
LEU
127
B
O
LEU
127
B
N
VAL
128
B
N
VAL
128
B
O
THR
153
B
O
THR
153
B
N
ARG
179
B
N
ARG
179
B
O
GLU
199
B
O
GLU
199
B
N
VAL
200
B
N
VAL
200
B
O
ARG
203
B
O
ARG
203
B
N
THR
182
B
N
THR
182
B
O
ASP
194
B
O
ASP
194
B
N
VAL
262
B
N
VAL
262
B
O
VAL
284
B
O
VAL
284
B
N
LYS
287
B
N
LYS
287
B
O
ALA
290
B
O
ALA
290
1
A
SER
188
-163.45
-168.92
1
A
TYR
272
57.22
19.06
1
B
LEU
206
-69.42
15.22
1
B
TYR
272
56.54
17.94
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
35.8
3.61
0.00
0.00
-1.64
0.00
-1.97
0.2260000
0.004
0.1930000
0.1930000
0.1930000
2.00
19.92
2545
51140
51066
5.0
99.3
RANDOM
2343735.87
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1BMD
Engh & Huber
FLAT MODEL
47.8969
0.328166
0.27
0.23
5.00
0.24
0.24
2.00
19.92
152
5130
0
0
4978
0.005
1.2
22.2
0.82
1.33
1.50
2.09
2.00
2.41
2.00
3.68
2.50
0.2750000
0.014
0.2650000
2.13
410
7921
6
4.9
99.2
21.8
2.0
70.71
1IZ9
51066
51066
0.0
5.0
0.0840000
1
5.8
99.5
0.3940000
2.00
2.07
1.6
98.7
data collection
CrystalClear
data reduction
CrystalClear
phasing
AMoRE
refinement
CNS
1.0
data scaling
CrystalClear
Crystal Structure of Malate Dehydrogenase from Thermus thermophilus HB8
1
N
N
1
N
N
2
N
N
2
N
N
A
GLY
14
A
GLY
14
HELX_P
A
ALA
26
A
ALA
26
1
1
13
A
ILE
43
A
ILE
43
HELX_P
A
GLN
45
A
GLN
45
5
2
3
A
ALA
46
A
ALA
46
HELX_P
A
ASP
59
A
ASP
59
1
3
14
A
ASP
73
A
ASP
73
HELX_P
A
PHE
78
A
PHE
78
1
4
6
A
GLU
97
A
GLU
97
HELX_P
A
ALA
120
A
ALA
120
1
5
24
A
PRO
132
A
PRO
132
HELX_P
A
ASN
143
A
ASN
143
1
6
12
A
ASN
148
A
ASN
148
HELX_P
A
ARG
150
A
ARG
150
5
7
3
A
THR
156
A
THR
156
HELX_P
A
GLY
172
A
GLY
172
1
8
17
A
GLY
174
A
GLY
174
HELX_P
A
ASP
176
A
ASP
176
5
9
3
A
LEU
206
A
LEU
206
HELX_P
A
LEU
208
A
LEU
208
5
10
3
A
ASP
210
A
ASP
210
HELX_P
A
VAL
217
A
VAL
217
1
11
8
A
VAL
217
A
VAL
217
HELX_P
A
GLY
234
A
GLY
234
1
12
18
A
SER
237
A
SER
237
HELX_P
A
GLY
255
A
GLY
255
1
13
19
A
GLY
270
A
GLY
270
HELX_P
A
ILE
274
A
ILE
274
5
14
5
A
ASN
300
A
ASN
300
HELX_P
A
LEU
324
A
LEU
324
1
15
25
B
GLY
14
B
GLY
14
HELX_P
B
ALA
26
B
ALA
26
1
16
13
B
ILE
43
B
ILE
43
HELX_P
B
GLN
45
B
GLN
45
5
17
3
B
ALA
46
B
ALA
46
HELX_P
B
ASP
59
B
ASP
59
1
18
14
B
ASP
73
B
ASP
73
HELX_P
B
PHE
78
B
PHE
78
1
19
6
B
GLU
97
B
GLU
97
HELX_P
B
ALA
120
B
ALA
120
1
20
24
B
PRO
132
B
PRO
132
HELX_P
B
ASN
143
B
ASN
143
1
21
12
B
ASN
148
B
ASN
148
HELX_P
B
ARG
150
B
ARG
150
5
22
3
B
THR
156
B
THR
156
HELX_P
B
GLY
172
B
GLY
172
1
23
17
B
GLY
174
B
GLY
174
HELX_P
B
ASP
176
B
ASP
176
5
24
3
B
LEU
206
B
LEU
206
HELX_P
B
LEU
208
B
LEU
208
5
25
3
B
ASP
210
B
ASP
210
HELX_P
B
VAL
217
B
VAL
217
1
26
8
B
VAL
217
B
VAL
217
HELX_P
B
GLY
234
B
GLY
234
1
27
18
B
SER
237
B
SER
237
HELX_P
B
LEU
254
B
LEU
254
1
28
18
B
GLY
270
B
GLY
270
HELX_P
B
ILE
274
B
ILE
274
5
29
5
B
ASN
300
B
ASN
300
HELX_P
B
LEU
324
B
LEU
324
1
30
25
OXIDOREDUCTASE
ROSSMANN FOLD, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, Oxidoreductase
A
ASN
131
A
ASN
131
1
A
PRO
132
A
PRO
132
-0.22
B
ASN
131
B
ASN
131
1
B
PRO
132
B
PRO
132
0.26
MDH_THETH
UNP
1
1
P10584
MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKD
ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDH
NRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQARGASSAAS
AANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEMEQ
VKALGLI
1
327
1IZ9
1
327
P10584
A
1
1
327
1
327
1IZ9
1
327
P10584
B
1
1
327
6
3
2
3
6
3
2
3
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
65
A
LEU
65
A
THR
71
A
THR
71
A
VAL
36
A
VAL
36
A
LEU
41
A
LEU
41
A
VAL
5
A
VAL
5
A
THR
10
A
THR
10
A
TYR
83
A
TYR
83
A
LEU
86
A
LEU
86
A
LYS
125
A
LYS
125
A
VAL
128
A
VAL
128
A
PHE
152
A
PHE
152
A
ALA
154
A
ALA
154
A
ILE
178
A
ILE
178
A
ARG
179
A
ARG
179
A
GLU
199
A
GLU
199
A
VAL
200
A
VAL
200
A
ARG
203
A
ARG
203
A
PRO
204
A
PRO
204
A
THR
182
A
THR
182
A
TRP
184
A
TRP
184
A
PHE
192
A
PHE
192
A
ASP
194
A
ASP
194
A
VAL
262
A
VAL
262
A
PRO
267
A
PRO
267
A
VAL
279
A
VAL
279
A
LYS
287
A
LYS
287
A
ALA
290
A
ALA
290
A
VAL
293
A
VAL
293
B
LEU
65
B
LEU
65
B
THR
71
B
THR
71
B
VAL
36
B
VAL
36
B
LEU
41
B
LEU
41
B
VAL
5
B
VAL
5
B
THR
10
B
THR
10
B
TYR
83
B
TYR
83
B
LEU
86
B
LEU
86
B
LYS
125
B
LYS
125
B
VAL
128
B
VAL
128
B
PHE
152
B
PHE
152
B
ALA
154
B
ALA
154
B
ILE
178
B
ILE
178
B
ARG
179
B
ARG
179
B
GLU
199
B
GLU
199
B
VAL
200
B
VAL
200
B
ARG
203
B
ARG
203
B
PRO
204
B
PRO
204
B
THR
182
B
THR
182
B
TRP
184
B
TRP
184
B
PHE
192
B
PHE
192
B
ASP
194
B
ASP
194
B
VAL
262
B
VAL
262
B
PRO
267
B
PRO
267
B
VAL
279
B
VAL
279
B
LYS
287
B
LYS
287
B
ALA
290
B
ALA
290
B
VAL
293
B
VAL
293
19
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