0.009366
0.000000
0.005475
0.000000
0.025889
0.000000
0.000000
0.000000
0.014712
0.00000
0.00000
0.00000
Kamitori, S.
Ohtaki, A.
Ino, H.
Takeuchi, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
120.31
90.00
106.767
38.627
78.732
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C5 H10 O2
102.132
ISOVALERIC ACID
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C6 H12 O6
180.156
alpha-D-mannopyranose
alpha-D-mannose; D-mannose; mannose
D-saccharide, alpha linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C8 H17 N O3
175.225
STATINE
peptide-like
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
O
N
175
N
O
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
N
N
187
S
C
N
188
N
C
N
189
N
O
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
C
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
N
N
209
S
C
N
210
N
C
N
211
N
O
N
212
N
C
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
N
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
S
C
N
234
S
C
N
235
S
C
N
236
S
C
N
237
R
C
N
238
N
C
N
239
N
O
N
240
N
O
N
241
N
O
N
242
N
O
N
243
N
O
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
N
N
258
S
C
N
259
N
C
N
260
N
O
N
261
N
C
Y
262
N
C
Y
263
N
C
Y
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
N
C
N
302
N
O
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
N
N
312
S
C
N
313
N
C
N
314
N
C
N
315
N
C
N
316
N
C
N
317
S
C
N
318
N
O
N
319
N
C
N
320
N
C
N
321
N
O
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
R
C
N
345
N
O
N
346
N
C
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
N
N
358
S
C
N
359
N
C
N
360
N
O
N
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
N
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
N
395
N
O
N
396
N
O
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
N
N
409
S
C
N
410
N
C
N
411
N
O
N
412
N
C
N
413
N
C
N
414
N
C
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
Y
256
N
doub
Y
257
N
sing
Y
258
N
sing
N
259
N
sing
Y
260
N
doub
N
261
N
sing
Y
262
N
doub
N
263
N
sing
Y
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
Y
353
N
doub
Y
354
N
sing
Y
355
N
sing
N
356
N
sing
Y
357
N
doub
Y
358
N
sing
Y
359
N
sing
N
360
N
sing
Y
361
N
sing
Y
362
N
doub
N
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
doub
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
Y
381
N
doub
Y
382
N
sing
Y
383
N
sing
N
384
N
sing
Y
385
N
doub
N
386
N
sing
Y
387
N
doub
N
388
N
sing
Y
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
326
1503
1511
10.1016/S0022-2836(03)00078-0
12595261
Crystal structures of Aspergillus oryzae aspartic proteinase and its complex with an inhibitor pepstatin at 1.9A resolution.
2003
10.2210/pdb1ize/pdb
pdb_00001ize
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
IMAGE PLATE
2002-06-03
RIGAKU RAXIS IIC
graphite
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU300
33801.902
aspartic proteinase
RESIDUES 1-323
1
nat
polymer
685.891
Pepstatin
1
syn
polymer
180.156
alpha-D-mannopyranose
1
man
non-polymer
18.015
water
107
nat
water
aspartic proteinase II-1
no
no
AATGSVTTNPTSNDEEYITQVTVGDDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSAQKIDGATWSISYGDGSS
ASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSSLSEPIFAVALKHN
APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDSIVDAYYEQVNGASYD
SSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFADVGNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFA
AQA
AATGSVTTNPTSNDEEYITQVTVGDDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSAQKIDGATWSISYGDGSS
ASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSSLSEPIFAVALKHN
APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDSIVDAYYEQVNGASYD
SSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFADVGNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFA
AQA
A
polypeptide(L)
no
yes
(IVA)VV(STA)A(STA)
XVVXAX
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Aspergillus
sample
5062
Aspergillus oryzae
3
1.96
36.70
VAPOR DIFFUSION, HANGING DROP
5.0
PEG4000, ammonium acetate, sodium acetate trihydrate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
software
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Atomic model
Database references
Derived calculations
Non-polymer description
Structure summary
Version format compliance
Other
Refinement description
Data collection
Derived calculations
Structure summary
Data collection
Database references
Structure summary
1
0
2003-03-04
1
1
2008-04-27
1
2
2011-07-13
1
3
2013-02-27
1
4
2017-10-04
1
5
2020-07-29
1
6
2023-12-27
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
DManpa
a-D-mannopyranose
a-D-Manp
Man
1IZD contains crystal structure of the same protein complexed with MAN
PDBJ
Y
PDBJ
2002-10-02
REL
REL
MAN
alpha-D-mannopyranose
HOH
water
285516
Streptomyces argenteolus subsp. toyonakensis
sample
Enzyme inhibitor
Pepstatin
Oligopeptide
MAN
1001
3
MAN
MAN
1001
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2051
4
HOH
HOH
2051
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2058
4
HOH
HOH
2058
A
HOH
2059
4
HOH
HOH
2059
A
HOH
2060
4
HOH
HOH
2060
A
HOH
2061
4
HOH
HOH
2061
A
HOH
2063
4
HOH
HOH
2063
A
HOH
2064
4
HOH
HOH
2064
A
HOH
2065
4
HOH
HOH
2065
A
HOH
2066
4
HOH
HOH
2066
A
HOH
2067
4
HOH
HOH
2067
A
HOH
2069
4
HOH
HOH
2069
A
HOH
2070
4
HOH
HOH
2070
A
HOH
2071
4
HOH
HOH
2071
A
HOH
2072
4
HOH
HOH
2072
A
HOH
2073
4
HOH
HOH
2073
A
HOH
2074
4
HOH
HOH
2074
A
HOH
2075
4
HOH
HOH
2075
A
HOH
2076
4
HOH
HOH
2076
A
HOH
2077
4
HOH
HOH
2077
A
HOH
2078
4
HOH
HOH
2078
A
HOH
2079
4
HOH
HOH
2079
A
HOH
2080
4
HOH
HOH
2080
A
HOH
2081
4
HOH
HOH
2081
A
HOH
2082
4
HOH
HOH
2082
A
HOH
2083
4
HOH
HOH
2083
A
HOH
2084
4
HOH
HOH
2084
A
HOH
2085
4
HOH
HOH
2085
A
HOH
2086
4
HOH
HOH
2086
A
HOH
2087
4
HOH
HOH
2087
A
HOH
2088
4
HOH
HOH
2088
A
HOH
2089
4
HOH
HOH
2089
A
HOH
2090
4
HOH
HOH
2090
A
HOH
2091
4
HOH
HOH
2091
A
HOH
2092
4
HOH
HOH
2092
A
HOH
2093
4
HOH
HOH
2093
A
HOH
2094
4
HOH
HOH
2094
A
HOH
2095
4
HOH
HOH
2095
A
HOH
2096
4
HOH
HOH
2096
A
HOH
2097
4
HOH
HOH
2097
A
HOH
2098
4
HOH
HOH
2098
A
HOH
2099
4
HOH
HOH
2099
A
HOH
2100
4
HOH
HOH
2100
A
HOH
2101
4
HOH
HOH
2101
A
HOH
2102
4
HOH
HOH
2102
A
HOH
2103
4
HOH
HOH
2103
A
HOH
2104
4
HOH
HOH
2104
A
HOH
2105
4
HOH
HOH
2105
A
HOH
2106
4
HOH
HOH
2106
A
HOH
2107
4
HOH
HOH
2107
A
HOH
2108
4
HOH
HOH
2108
A
HOH
2002
4
HOH
HOH
2007
B
HOH
2062
4
HOH
HOH
2062
B
HOH
2068
4
HOH
HOH
2068
B
ALA
1
n
1
ALA
1
A
ALA
2
n
2
ALA
2
A
THR
3
n
3
THR
3
A
GLY
4
n
4
GLY
4
A
SER
5
n
5
SER
5
A
VAL
6
n
6
VAL
6
A
THR
7
n
7
THR
7
A
THR
8
n
8
THR
8
A
ASN
9
n
9
ASN
9
A
PRO
10
n
10
PRO
10
A
THR
11
n
11
THR
11
A
SER
12
n
12
SER
12
A
ASN
13
n
13
ASN
13
A
ASP
14
n
14
ASP
14
A
GLU
15
n
15
GLU
15
A
GLU
16
n
16
GLU
16
A
TYR
17
n
17
TYR
17
A
ILE
18
n
18
ILE
18
A
THR
19
n
19
THR
19
A
GLN
20
n
20
GLN
20
A
VAL
21
n
21
VAL
21
A
THR
22
n
22
THR
22
A
VAL
23
n
23
VAL
23
A
GLY
24
n
24
GLY
24
A
ASP
25
n
25
ASP
25
A
ASP
26
n
26
ASP
26
A
THR
27
n
27
THR
27
A
LEU
28
n
28
LEU
28
A
GLY
29
n
29
GLY
29
A
LEU
30
n
30
LEU
30
A
ASP
31
n
31
ASP
31
A
PHE
32
n
32
PHE
32
A
ASP
33
n
33
ASP
33
A
THR
34
n
34
THR
34
A
GLY
35
n
35
GLY
35
A
SER
36
n
36
SER
36
A
ALA
37
n
37
ALA
37
A
ASP
38
n
38
ASP
38
A
LEU
39
n
39
LEU
39
A
TRP
40
n
40
TRP
40
A
VAL
41
n
41
VAL
41
A
PHE
42
n
42
PHE
42
A
SER
43
n
43
SER
43
A
SER
44
n
44
SER
44
A
GLN
45
n
45
GLN
45
A
THR
46
n
46
THR
46
A
PRO
47
n
47
PRO
47
A
SER
48
n
48
SER
48
A
SER
49
n
49
SER
49
A
GLU
50
n
50
GLU
50
A
ARG
51
n
51
ARG
51
A
SER
52
n
52
SER
52
A
GLY
53
n
53
GLY
53
A
HIS
54
n
54
HIS
54
A
ASP
55
n
55
ASP
55
A
TYR
56
n
56
TYR
56
A
TYR
57
n
57
TYR
57
A
THR
58
n
58
THR
58
A
PRO
59
n
59
PRO
59
A
GLY
60
n
60
GLY
60
A
SER
61
n
61
SER
61
A
SER
62
n
62
SER
62
A
ALA
63
n
63
ALA
63
A
GLN
64
n
64
GLN
64
A
LYS
65
n
65
LYS
65
A
ILE
66
n
66
ILE
66
A
ASP
67
n
67
ASP
67
A
GLY
68
n
68
GLY
68
A
ALA
69
n
69
ALA
69
A
THR
70
n
70
THR
70
A
TRP
71
n
71
TRP
71
A
SER
72
n
72
SER
72
A
ILE
73
n
73
ILE
73
A
SER
74
n
74
SER
74
A
TYR
75
n
75
TYR
75
A
GLY
76
n
76
GLY
76
A
ASP
77
n
77
ASP
77
A
GLY
78
n
78
GLY
78
A
SER
79
n
79
SER
79
A
SER
80
n
80
SER
80
A
ALA
81
n
81
ALA
81
A
SER
82
n
82
SER
82
A
GLY
83
n
83
GLY
83
A
ASP
84
n
84
ASP
84
A
VAL
85
n
85
VAL
85
A
TYR
86
n
86
TYR
86
A
LYS
87
n
87
LYS
87
A
ASP
88
n
88
ASP
88
A
LYS
89
n
89
LYS
89
A
VAL
90
n
90
VAL
90
A
THR
91
n
91
THR
91
A
VAL
92
n
92
VAL
92
A
GLY
93
n
93
GLY
93
A
GLY
94
n
94
GLY
94
A
VAL
95
n
95
VAL
95
A
SER
96
n
96
SER
96
A
TYR
97
n
97
TYR
97
A
ASP
98
n
98
ASP
98
A
SER
99
n
99
SER
99
A
GLN
100
n
100
GLN
100
A
ALA
101
n
101
ALA
101
A
VAL
102
n
102
VAL
102
A
GLU
103
n
103
GLU
103
A
SER
104
n
104
SER
104
A
ALA
105
n
105
ALA
105
A
GLU
106
n
106
GLU
106
A
LYS
107
n
107
LYS
107
A
VAL
108
n
108
VAL
108
A
SER
109
n
109
SER
109
A
SER
110
n
110
SER
110
A
GLU
111
n
111
GLU
111
A
PHE
112
n
112
PHE
112
A
THR
113
n
113
THR
113
A
GLN
114
n
114
GLN
114
A
ASP
115
n
115
ASP
115
A
THR
116
n
116
THR
116
A
ALA
117
n
117
ALA
117
A
ASN
118
n
118
ASN
118
A
ASP
119
n
119
ASP
119
A
GLY
120
n
120
GLY
120
A
LEU
121
n
121
LEU
121
A
LEU
122
n
122
LEU
122
A
GLY
123
n
123
GLY
123
A
LEU
124
n
124
LEU
124
A
ALA
125
n
125
ALA
125
A
PHE
126
n
126
PHE
126
A
SER
127
n
127
SER
127
A
SER
128
n
128
SER
128
A
ILE
129
n
129
ILE
129
A
ASN
130
n
130
ASN
130
A
THR
131
n
131
THR
131
A
VAL
132
n
132
VAL
132
A
GLN
133
n
133
GLN
133
A
PRO
134
n
134
PRO
134
A
THR
135
n
135
THR
135
A
PRO
136
n
136
PRO
136
A
GLN
137
n
137
GLN
137
A
LYS
138
n
138
LYS
138
A
THR
139
n
139
THR
139
A
PHE
140
n
140
PHE
140
A
PHE
141
n
141
PHE
141
A
ASP
142
n
142
ASP
142
A
ASN
143
n
143
ASN
143
A
VAL
144
n
144
VAL
144
A
LYS
145
n
145
LYS
145
A
SER
146
n
146
SER
146
A
SER
147
n
147
SER
147
A
LEU
148
n
148
LEU
148
A
SER
149
n
149
SER
149
A
GLU
150
n
150
GLU
150
A
PRO
151
n
151
PRO
151
A
ILE
152
n
152
ILE
152
A
PHE
153
n
153
PHE
153
A
ALA
154
n
154
ALA
154
A
VAL
155
n
155
VAL
155
A
ALA
156
n
156
ALA
156
A
LEU
157
n
157
LEU
157
A
LYS
158
n
158
LYS
158
A
HIS
159
n
159
HIS
159
A
ASN
160
n
160
ASN
160
A
ALA
161
n
161
ALA
161
A
PRO
162
n
162
PRO
162
A
GLY
163
n
163
GLY
163
A
VAL
164
n
164
VAL
164
A
TYR
165
n
165
TYR
165
A
ASP
166
n
166
ASP
166
A
PHE
167
n
167
PHE
167
A
GLY
168
n
168
GLY
168
A
TYR
169
n
169
TYR
169
A
THR
170
n
170
THR
170
A
ASP
171
n
171
ASP
171
A
SER
172
n
172
SER
172
A
SER
173
n
173
SER
173
A
LYS
174
n
174
LYS
174
A
TYR
175
n
175
TYR
175
A
THR
176
n
176
THR
176
A
GLY
177
n
177
GLY
177
A
SER
178
n
178
SER
178
A
ILE
179
n
179
ILE
179
A
THR
180
n
180
THR
180
A
TYR
181
n
181
TYR
181
A
THR
182
n
182
THR
182
A
ASP
183
n
183
ASP
183
A
VAL
184
n
184
VAL
184
A
ASP
185
n
185
ASP
185
A
ASN
186
n
186
ASN
186
A
SER
187
n
187
SER
187
A
GLN
188
n
188
GLN
188
A
GLY
189
n
189
GLY
189
A
PHE
190
n
190
PHE
190
A
TRP
191
n
191
TRP
191
A
GLY
192
n
192
GLY
192
A
PHE
193
n
193
PHE
193
A
THR
194
n
194
THR
194
A
ALA
195
n
195
ALA
195
A
ASP
196
n
196
ASP
196
A
GLY
197
n
197
GLY
197
A
TYR
198
n
198
TYR
198
A
SER
199
n
199
SER
199
A
ILE
200
n
200
ILE
200
A
GLY
201
n
201
GLY
201
A
SER
202
n
202
SER
202
A
ASP
203
n
203
ASP
203
A
SER
204
n
204
SER
204
A
SER
205
n
205
SER
205
A
SER
206
n
206
SER
206
A
ASP
207
n
207
ASP
207
A
SER
208
n
208
SER
208
A
ILE
209
n
209
ILE
209
A
THR
210
n
210
THR
210
A
GLY
211
n
211
GLY
211
A
ILE
212
n
212
ILE
212
A
ALA
213
n
213
ALA
213
A
ASP
214
n
214
ASP
214
A
THR
215
n
215
THR
215
A
GLY
216
n
216
GLY
216
A
THR
217
n
217
THR
217
A
THR
218
n
218
THR
218
A
LEU
219
n
219
LEU
219
A
LEU
220
n
220
LEU
220
A
LEU
221
n
221
LEU
221
A
LEU
222
n
222
LEU
222
A
ASP
223
n
223
ASP
223
A
ASP
224
n
224
ASP
224
A
SER
225
n
225
SER
225
A
ILE
226
n
226
ILE
226
A
VAL
227
n
227
VAL
227
A
ASP
228
n
228
ASP
228
A
ALA
229
n
229
ALA
229
A
TYR
230
n
230
TYR
230
A
TYR
231
n
231
TYR
231
A
GLU
232
n
232
GLU
232
A
GLN
233
n
233
GLN
233
A
VAL
234
n
234
VAL
234
A
ASN
235
n
235
ASN
235
A
GLY
236
n
236
GLY
236
A
ALA
237
n
237
ALA
237
A
SER
238
n
238
SER
238
A
TYR
239
n
239
TYR
239
A
ASP
240
n
240
ASP
240
A
SER
241
n
241
SER
241
A
SER
242
n
242
SER
242
A
GLN
243
n
243
GLN
243
A
GLY
244
n
244
GLY
244
A
GLY
245
n
245
GLY
245
A
TYR
246
n
246
TYR
246
A
VAL
247
n
247
VAL
247
A
PHE
248
n
248
PHE
248
A
PRO
249
n
249
PRO
249
A
SER
250
n
250
SER
250
A
SER
251
n
251
SER
251
A
ALA
252
n
252
ALA
252
A
SER
253
n
253
SER
253
A
LEU
254
n
254
LEU
254
A
PRO
255
n
255
PRO
255
A
ASP
256
n
256
ASP
256
A
PHE
257
n
257
PHE
257
A
SER
258
n
258
SER
258
A
VAL
259
n
259
VAL
259
A
THR
260
n
260
THR
260
A
ILE
261
n
261
ILE
261
A
GLY
262
n
262
GLY
262
A
ASP
263
n
263
ASP
263
A
TYR
264
n
264
TYR
264
A
THR
265
n
265
THR
265
A
ALA
266
n
266
ALA
266
A
THR
267
n
267
THR
267
A
VAL
268
n
268
VAL
268
A
PRO
269
n
269
PRO
269
A
GLY
270
n
270
GLY
270
A
GLU
271
n
271
GLU
271
A
TYR
272
n
272
TYR
272
A
ILE
273
n
273
ILE
273
A
SER
274
n
274
SER
274
A
PHE
275
n
275
PHE
275
A
ALA
276
n
276
ALA
276
A
ASP
277
n
277
ASP
277
A
VAL
278
n
278
VAL
278
A
GLY
279
n
279
GLY
279
A
ASN
280
n
280
ASN
280
A
GLY
281
n
281
GLY
281
A
GLN
282
n
282
GLN
282
A
THR
283
n
283
THR
283
A
PHE
284
n
284
PHE
284
A
GLY
285
n
285
GLY
285
A
GLY
286
n
286
GLY
286
A
ILE
287
n
287
ILE
287
A
GLN
288
n
288
GLN
288
A
SER
289
n
289
SER
289
A
ASN
290
n
290
ASN
290
A
SER
291
n
291
SER
291
A
GLY
292
n
292
GLY
292
A
ILE
293
n
293
ILE
293
A
GLY
294
n
294
GLY
294
A
PHE
295
n
295
PHE
295
A
SER
296
n
296
SER
296
A
ILE
297
n
297
ILE
297
A
PHE
298
n
298
PHE
298
A
GLY
299
n
299
GLY
299
A
ASP
300
n
300
ASP
300
A
VAL
301
n
301
VAL
301
A
PHE
302
n
302
PHE
302
A
LEU
303
n
303
LEU
303
A
LYS
304
n
304
LYS
304
A
SER
305
n
305
SER
305
A
GLN
306
n
306
GLN
306
A
TYR
307
n
307
TYR
307
A
VAL
308
n
308
VAL
308
A
VAL
309
n
309
VAL
309
A
PHE
310
n
310
PHE
310
A
ASP
311
n
311
ASP
311
A
ALA
312
n
312
ALA
312
A
SER
313
n
313
SER
313
A
GLY
314
n
314
GLY
314
A
PRO
315
n
315
PRO
315
A
ARG
316
n
316
ARG
316
A
LEU
317
n
317
LEU
317
A
GLY
318
n
318
GLY
318
A
PHE
319
n
319
PHE
319
A
ALA
320
n
320
ALA
320
A
ALA
321
n
321
ALA
321
A
GLN
322
n
322
GLN
322
A
ALA
323
n
323
ALA
323
A
IVA
2001
n
1
IVA
2001
B
VAL
2002
n
2
VAL
2002
B
VAL
2003
n
3
VAL
2003
B
STA
2004
n
4
STA
2004
B
ALA
2005
n
5
ALA
2005
B
STA
2006
n
6
STA
2006
B
author_and_software_defined_assembly
PISA
2
dimeric
1500
-8
13010
A
THR
3
GLYCOSYLATION SITE
A
THR
3
THR
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
73
A
N
ILE
73
A
O
ALA
81
A
O
ALA
81
A
N
THR
91
A
N
THR
91
A
O
THR
22
A
O
THR
22
A
N
VAL
23
A
N
VAL
23
A
O
ASP
26
A
O
ASP
26
A
N
ASP
31
A
N
ASP
31
A
O
GLY
120
A
O
GLY
120
A
O
LEU
121
A
O
LEU
121
A
N
TRP
40
A
N
TRP
40
A
N
VAL
41
A
N
VAL
41
A
O
GLU
103
A
O
GLU
103
A
N
GLU
106
A
N
GLU
106
A
O
SER
82
A
O
SER
82
A
N
THR
91
A
N
THR
91
A
O
THR
22
A
O
THR
22
A
N
GLN
20
A
N
GLN
20
A
O
THR
7
A
O
THR
7
A
O
THR
8
A
O
THR
8
A
N
GLY
163
A
N
GLY
163
A
N
ASP
166
A
N
ASP
166
A
O
ALA
154
A
O
ALA
154
A
O
VAL
155
A
O
VAL
155
A
N
VAL
308
A
N
VAL
308
A
O
ASP
311
A
O
ASP
311
A
N
ARG
316
A
N
ARG
316
A
O
ALA
321
A
O
ALA
321
A
N
THR
176
A
N
THR
176
A
N
ALA
195
A
N
ALA
195
A
O
ILE
209
A
O
ILE
209
A
N
ILE
212
A
N
ILE
212
A
O
SER
296
A
O
SER
296
A
O
ILE
297
A
O
ILE
297
A
N
LEU
221
A
N
LEU
221
A
N
LEU
222
A
N
LEU
222
A
O
GLN
288
A
O
GLN
288
A
N
SER
205
A
N
SER
205
A
O
TYR
198
A
O
TYR
198
A
O
SER
199
A
O
SER
199
A
N
SER
258
A
N
SER
258
A
N
ILE
261
A
N
ILE
261
A
O
TYR
264
A
O
TYR
264
A
N
ASP
240
A
N
ASP
240
A
O
GLY
245
A
O
GLY
245
A
O
PHE
248
A
O
PHE
248
A
N
THR
283
A
N
THR
283
A
O
PHE
284
A
O
PHE
284
A
N
PHE
275
A
N
PHE
275
1
B
STA
2004
30.09
1
B
B
STA
ALA
2004
2005
-119.52
1
A
SER
291
-36.52
119.40
PROTEIN_REP.PARAM
PROTEIN.TOP
DNA-RNA_REP.PARAM
DNA-RNA.TOP
WATER_REP.PARAM
WATER.TOP
CARBOHYDRATE.PARAM
CARBOHYDRATE.TOP
LIGAND.PARAM
LIGAND.TOP
16.5
-0.49
0.00
0.52
1.28
0.00
-0.79
0.221
0.005
0.185
0.185
1.90
52.3
1928
19551
19551
9.9
88.2
RANDOM
1
RESTRAINED
THROUGHOUT
0.0
0.0
MOLECULAR REPLACEMENT
CNS
FLAT MODEL
34.8325
0.305204
0.24
0.20
5.00
0.04
1.90
52.3
107
2557
11
0
2439
0.005
1.3
26.4
0.66
1.29
1.50
1.89
2.00
2.07
2.00
2.95
2.50
0.23
0.013
0.19
2.02
304
2479
6
10.9
75.9
6.8
1.9
52.34
1IZE
58695
58695
0.0
0.0
0.092
1
100
1.9
2.02
1
75.9
data scaling
SCALEPACK
refinement
CNS
phasing
CNS
Crystal structure of Aspergillus oryzae Aspartic proteinase complexed with pepstatin
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
SER
12
A
SER
12
HELX_P
A
GLU
15
A
GLU
15
5
1
4
A
PRO
47
A
PRO
47
HELX_P
A
SER
52
A
SER
52
1
2
6
A
SER
109
A
SER
109
HELX_P
A
ASP
115
A
ASP
115
1
3
7
A
PHE
126
A
PHE
126
HELX_P
A
ASN
130
A
ASN
130
5
4
5
A
THR
139
A
THR
139
HELX_P
A
LYS
145
A
LYS
145
1
5
7
A
SER
146
A
SER
146
HELX_P
A
LEU
148
A
LEU
148
5
6
3
A
ASP
223
A
ASP
223
HELX_P
A
GLU
232
A
GLU
232
1
7
10
A
PRO
269
A
PRO
269
HELX_P
A
ILE
273
A
ILE
273
1
8
5
A
GLY
299
A
GLY
299
HELX_P
A
LYS
304
A
LYS
304
1
9
6
covale
1.390
one
O-Glycosylation
A
THR
3
A
OG1
THR
3
1_555
A
MAN
1001
C
C1
MAN
1_555
covale
1.328
both
B
IVA
2001
B
C
IVA
1
1_555
B
VAL
2002
B
N
VAL
2
1_555
covale
1.330
both
B
VAL
2003
B
C
VAL
3
1_555
B
STA
2004
B
N
STA
4
1_555
covale
1.330
both
B
STA
2004
B
C
STA
4
1_555
B
ALA
2005
B
N
ALA
5
1_555
covale
1.330
both
B
ALA
2005
B
C
ALA
5
1_555
B
STA
2006
B
N
STA
6
1_555
HYDROLASE/HYDROLASE INHIBITOR
acid protease, sugar binding, HYDROLASE-HYDROLASE INHIBITOR complex
A
GLN
133
A
GLN
133
1
A
PRO
134
A
PRO
134
-0.02
A
GLY
314
A
GLY
314
1
A
PRO
315
A
PRO
315
0.06
Q9URD0_ASPOR
UNP
1
68
Q9URD0
AATGSVTTNPTSNDEEYITQVTVGDDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSAQKIDGATWSISYGDGSS
ASGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSSLSEPIFAVALKHN
APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDSIVDAYYEQVNGASYD
SSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFADVGNGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFA
AQA
1IZE
PDB
2
1IZE
68
390
1IZE
1
323
Q9URD0
A
1
1
323
2001
2006
1IZE
2001
2006
1IZE
B
2
1
6
15
5
4
4
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLN
64
A
GLN
64
A
SER
74
A
SER
74
A
SER
80
A
SER
80
A
VAL
92
A
VAL
92
A
TYR
17
A
TYR
17
A
VAL
23
A
VAL
23
A
ASP
26
A
ASP
26
A
ASP
33
A
ASP
33
A
GLY
120
A
GLY
120
A
GLY
123
A
GLY
123
A
TRP
40
A
TRP
40
A
VAL
41
A
VAL
41
A
VAL
95
A
VAL
95
A
VAL
108
A
VAL
108
A
SER
80
A
SER
80
A
VAL
92
A
VAL
92
A
TYR
17
A
TYR
17
A
VAL
23
A
VAL
23
A
GLY
4
A
GLY
4
A
PRO
10
A
PRO
10
A
GLY
163
A
GLY
163
A
PHE
167
A
PHE
167
A
ILE
152
A
ILE
152
A
ALA
156
A
ALA
156
A
GLN
306
A
GLN
306
A
ASP
311
A
ASP
311
A
ARG
316
A
ARG
316
A
GLN
322
A
GLN
322
A
TYR
175
A
TYR
175
A
ASP
183
A
ASP
183
A
GLY
192
A
GLY
192
A
ALA
195
A
ALA
195
A
ILE
209
A
ILE
209
A
ALA
213
A
ALA
213
A
SER
296
A
SER
296
A
PHE
298
A
PHE
298
A
LEU
220
A
LEU
220
A
LEU
222
A
LEU
222
A
ILE
287
A
ILE
287
A
SER
289
A
SER
289
A
ASP
203
A
ASP
203
A
SER
205
A
SER
205
A
GLY
197
A
GLY
197
A
ILE
200
A
ILE
200
A
PHE
257
A
PHE
257
A
ILE
261
A
ILE
261
A
TYR
264
A
TYR
264
A
VAL
268
A
VAL
268
A
SER
238
A
SER
238
A
ASP
240
A
ASP
240
A
GLY
245
A
GLY
245
A
PRO
249
A
PRO
249
A
GLN
282
A
GLN
282
A
GLY
285
A
GLY
285
A
SER
274
A
SER
274
A
ASP
277
A
ASP
277
5
C 1 2 1