0.023649
-0.000001
-0.000001
0.000000
0.023649
-0.000001
0.000000
0.000000
0.005039
0.00000
0.00000
0.00000
Galkin, A.
Sarikaya, E.
Lehmann, C.
Howard, A.
Herzberg, O.
Structure 2 Function Project (S2F)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
42.3
42.3
198.5
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
SE
N
258
N
C
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
Y
275
N
C
Y
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
N
298
N
C
N
299
N
C
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
N
C
N
315
N
O
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
R
C
N
329
N
O
N
330
N
C
N
331
N
O
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
N
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
N
379
N
O
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
N
397
N
C
N
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
Y
267
N
doub
Y
268
N
sing
Y
269
N
sing
N
270
N
sing
Y
271
N
doub
N
272
N
sing
Y
273
N
doub
N
274
N
sing
Y
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
Y
336
N
doub
Y
337
N
sing
Y
338
N
sing
N
339
N
sing
Y
340
N
doub
Y
341
N
sing
Y
342
N
sing
N
343
N
sing
Y
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
doub
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
Y
364
N
doub
Y
365
N
sing
Y
366
N
sing
N
367
N
sing
Y
368
N
doub
N
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
doub
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
US
Proteins
PSFGEY
0867
0887-3585
57
874
877
10.1002/prot.20260
15317022
X-ray structure of HI0817 from Haemophilus influenzae: protein of unknown function with a novel fold.
2004
10.2210/pdb1izm/pdb
pdb_00001izm
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2001-12-06
ADSC QUANTUM 4
Si(111) double crystal system
MAD
M
x-ray
1
0.97946
1.0
0.97961
1.0
0.96863
1.0
17-ID
APS
0.97946, 0.97961, 0.96863
SYNCHROTRON
APS BEAMLINE 17-ID
20604.152
HYPOTHETICAL PROTEIN HI0817
L8M
1
man
polymer
18.015
water
201
nat
water
no
yes
GS(MSE)LISHSD(MSE)NQQLKSAGIGFNATELHGFLSGLLCGGLKDQSWLPLLYQFSNDNHAYPTGLVQPVTELYEQI
SQTLSDVEGFTFELGLTEDENVFTQADSLSDWANQFLLGIGLAQPELAKEKGEIGEAVDDLQDICQLGYDEDDNEEELAE
ALEEIIEYVRTIA(MSE)LFYSHFNEGEIESKPVLH
GSMLISHSDMNQQLKSAGIGFNATELHGFLSGLLCGGLKDQSWLPLLYQFSNDNHAYPTGLVQPVTELYEQISQTLSDVE
GFTFELGLTEDENVFTQADSLSDWANQFLLGIGLAQPELAKEKGEIGEAVDDLQDICQLGYDEDDNEEELAEALEEIIEY
VRTIAMLFYSHFNEGEIESKPVLH
A
HI0817
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Haemophilus
Escherichia
sample
HI0817
727
Haemophilus influenzae
562
Escherichia coli
B834(DE3)
PLASMID
pET100
1
2.15
42.92
VAPOR DIFFUSION, HANGING DROP
4.8
1.4 M ammonimum sulfate, 0.05 M potassium phosphate, 3% iso-propanol, pH 4.8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
Structure 2 Function Project
S2F
database_2
struct_conn
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
1
0
2003-12-02
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-10-27
1
4
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
Y
PDBJ
Y
RCSB
2002-10-09
REL
REL
HOH
water
HOH
1
2
HOH
HOH
183
A
HOH
2
2
HOH
HOH
184
A
HOH
3
2
HOH
HOH
185
A
HOH
4
2
HOH
HOH
186
A
HOH
5
2
HOH
HOH
187
A
HOH
6
2
HOH
HOH
188
A
HOH
7
2
HOH
HOH
189
A
HOH
8
2
HOH
HOH
190
A
HOH
9
2
HOH
HOH
191
A
HOH
10
2
HOH
HOH
192
A
HOH
11
2
HOH
HOH
193
A
HOH
12
2
HOH
HOH
194
A
HOH
13
2
HOH
HOH
195
A
HOH
14
2
HOH
HOH
196
A
HOH
15
2
HOH
HOH
197
A
HOH
16
2
HOH
HOH
198
A
HOH
17
2
HOH
HOH
199
A
HOH
18
2
HOH
HOH
200
A
HOH
19
2
HOH
HOH
201
A
HOH
20
2
HOH
HOH
202
A
HOH
21
2
HOH
HOH
203
A
HOH
22
2
HOH
HOH
204
A
HOH
23
2
HOH
HOH
205
A
HOH
24
2
HOH
HOH
206
A
HOH
25
2
HOH
HOH
207
A
HOH
26
2
HOH
HOH
208
A
HOH
27
2
HOH
HOH
209
A
HOH
28
2
HOH
HOH
210
A
HOH
29
2
HOH
HOH
211
A
HOH
30
2
HOH
HOH
212
A
HOH
31
2
HOH
HOH
213
A
HOH
32
2
HOH
HOH
214
A
HOH
33
2
HOH
HOH
215
A
HOH
34
2
HOH
HOH
216
A
HOH
35
2
HOH
HOH
217
A
HOH
36
2
HOH
HOH
218
A
HOH
37
2
HOH
HOH
219
A
HOH
38
2
HOH
HOH
220
A
HOH
39
2
HOH
HOH
221
A
HOH
40
2
HOH
HOH
222
A
HOH
41
2
HOH
HOH
223
A
HOH
42
2
HOH
HOH
224
A
HOH
43
2
HOH
HOH
225
A
HOH
44
2
HOH
HOH
226
A
HOH
45
2
HOH
HOH
227
A
HOH
46
2
HOH
HOH
228
A
HOH
47
2
HOH
HOH
229
A
HOH
48
2
HOH
HOH
230
A
HOH
49
2
HOH
HOH
231
A
HOH
50
2
HOH
HOH
232
A
HOH
51
2
HOH
HOH
233
A
HOH
52
2
HOH
HOH
234
A
HOH
53
2
HOH
HOH
235
A
HOH
54
2
HOH
HOH
236
A
HOH
55
2
HOH
HOH
237
A
HOH
56
2
HOH
HOH
238
A
HOH
57
2
HOH
HOH
239
A
HOH
58
2
HOH
HOH
240
A
HOH
59
2
HOH
HOH
241
A
HOH
60
2
HOH
HOH
242
A
HOH
61
2
HOH
HOH
243
A
HOH
62
2
HOH
HOH
244
A
HOH
63
2
HOH
HOH
245
A
HOH
64
2
HOH
HOH
246
A
HOH
65
2
HOH
HOH
247
A
HOH
66
2
HOH
HOH
248
A
HOH
67
2
HOH
HOH
249
A
HOH
68
2
HOH
HOH
250
A
HOH
69
2
HOH
HOH
251
A
HOH
70
2
HOH
HOH
252
A
HOH
71
2
HOH
HOH
253
A
HOH
72
2
HOH
HOH
254
A
HOH
73
2
HOH
HOH
255
A
HOH
74
2
HOH
HOH
256
A
HOH
75
2
HOH
HOH
257
A
HOH
76
2
HOH
HOH
258
A
HOH
77
2
HOH
HOH
259
A
HOH
78
2
HOH
HOH
260
A
HOH
79
2
HOH
HOH
261
A
HOH
80
2
HOH
HOH
262
A
HOH
81
2
HOH
HOH
263
A
HOH
82
2
HOH
HOH
264
A
HOH
83
2
HOH
HOH
265
A
HOH
84
2
HOH
HOH
266
A
HOH
85
2
HOH
HOH
267
A
HOH
86
2
HOH
HOH
268
A
HOH
87
2
HOH
HOH
269
A
HOH
88
2
HOH
HOH
270
A
HOH
89
2
HOH
HOH
271
A
HOH
90
2
HOH
HOH
272
A
HOH
91
2
HOH
HOH
273
A
HOH
92
2
HOH
HOH
274
A
HOH
93
2
HOH
HOH
275
A
HOH
94
2
HOH
HOH
276
A
HOH
95
2
HOH
HOH
277
A
HOH
96
2
HOH
HOH
278
A
HOH
97
2
HOH
HOH
279
A
HOH
98
2
HOH
HOH
280
A
HOH
99
2
HOH
HOH
281
A
HOH
100
2
HOH
HOH
282
A
HOH
101
2
HOH
HOH
283
A
HOH
102
2
HOH
HOH
284
A
HOH
103
2
HOH
HOH
285
A
HOH
104
2
HOH
HOH
286
A
HOH
105
2
HOH
HOH
287
A
HOH
106
2
HOH
HOH
288
A
HOH
107
2
HOH
HOH
289
A
HOH
108
2
HOH
HOH
290
A
HOH
109
2
HOH
HOH
291
A
HOH
110
2
HOH
HOH
292
A
HOH
111
2
HOH
HOH
293
A
HOH
112
2
HOH
HOH
294
A
HOH
113
2
HOH
HOH
295
A
HOH
114
2
HOH
HOH
296
A
HOH
115
2
HOH
HOH
297
A
HOH
116
2
HOH
HOH
298
A
HOH
117
2
HOH
HOH
299
A
HOH
118
2
HOH
HOH
300
A
HOH
119
2
HOH
HOH
301
A
HOH
120
2
HOH
HOH
302
A
HOH
121
2
HOH
HOH
303
A
HOH
122
2
HOH
HOH
304
A
HOH
123
2
HOH
HOH
305
A
HOH
124
2
HOH
HOH
306
A
HOH
125
2
HOH
HOH
307
A
HOH
126
2
HOH
HOH
308
A
HOH
127
2
HOH
HOH
309
A
HOH
128
2
HOH
HOH
310
A
HOH
129
2
HOH
HOH
311
A
HOH
130
2
HOH
HOH
312
A
HOH
131
2
HOH
HOH
313
A
HOH
132
2
HOH
HOH
314
A
HOH
133
2
HOH
HOH
315
A
HOH
134
2
HOH
HOH
316
A
HOH
135
2
HOH
HOH
317
A
HOH
136
2
HOH
HOH
318
A
HOH
137
2
HOH
HOH
319
A
HOH
138
2
HOH
HOH
320
A
HOH
139
2
HOH
HOH
321
A
HOH
140
2
HOH
HOH
322
A
HOH
141
2
HOH
HOH
323
A
HOH
142
2
HOH
HOH
324
A
HOH
143
2
HOH
HOH
325
A
HOH
144
2
HOH
HOH
326
A
HOH
145
2
HOH
HOH
327
A
HOH
146
2
HOH
HOH
328
A
HOH
147
2
HOH
HOH
329
A
HOH
148
2
HOH
HOH
330
A
HOH
149
2
HOH
HOH
331
A
HOH
150
2
HOH
HOH
332
A
HOH
151
2
HOH
HOH
333
A
HOH
152
2
HOH
HOH
334
A
HOH
153
2
HOH
HOH
335
A
HOH
154
2
HOH
HOH
336
A
HOH
155
2
HOH
HOH
337
A
HOH
156
2
HOH
HOH
338
A
HOH
157
2
HOH
HOH
339
A
HOH
158
2
HOH
HOH
340
A
HOH
159
2
HOH
HOH
341
A
HOH
160
2
HOH
HOH
342
A
HOH
161
2
HOH
HOH
343
A
HOH
162
2
HOH
HOH
344
A
HOH
163
2
HOH
HOH
345
A
HOH
164
2
HOH
HOH
346
A
HOH
165
2
HOH
HOH
347
A
HOH
166
2
HOH
HOH
348
A
HOH
167
2
HOH
HOH
349
A
HOH
168
2
HOH
HOH
350
A
HOH
169
2
HOH
HOH
351
A
HOH
170
2
HOH
HOH
352
A
HOH
171
2
HOH
HOH
353
A
HOH
172
2
HOH
HOH
354
A
HOH
173
2
HOH
HOH
355
A
HOH
174
2
HOH
HOH
356
A
HOH
175
2
HOH
HOH
357
A
HOH
176
2
HOH
HOH
358
A
HOH
177
2
HOH
HOH
359
A
HOH
178
2
HOH
HOH
360
A
HOH
179
2
HOH
HOH
361
A
HOH
180
2
HOH
HOH
362
A
HOH
181
2
HOH
HOH
363
A
HOH
182
2
HOH
HOH
364
A
HOH
183
2
HOH
HOH
365
A
HOH
184
2
HOH
HOH
366
A
HOH
185
2
HOH
HOH
367
A
HOH
186
2
HOH
HOH
368
A
HOH
187
2
HOH
HOH
369
A
HOH
188
2
HOH
HOH
370
A
HOH
189
2
HOH
HOH
371
A
HOH
190
2
HOH
HOH
372
A
HOH
191
2
HOH
HOH
373
A
HOH
192
2
HOH
HOH
374
A
HOH
193
2
HOH
HOH
375
A
HOH
194
2
HOH
HOH
376
A
HOH
195
2
HOH
HOH
377
A
HOH
196
2
HOH
HOH
378
A
HOH
197
2
HOH
HOH
379
A
HOH
198
2
HOH
HOH
380
A
HOH
199
2
HOH
HOH
381
A
HOH
200
2
HOH
HOH
382
A
HOH
201
2
HOH
HOH
383
A
n
1
-1
A
n
2
0
A
n
3
1
A
LEU
2
n
4
LEU
2
A
ILE
3
n
5
ILE
3
A
SER
4
n
6
SER
4
A
HIS
5
n
7
HIS
5
A
SER
6
n
8
SER
6
A
ASP
7
n
9
ASP
7
A
MSE
8
n
10
MSE
8
A
ASN
9
n
11
ASN
9
A
GLN
10
n
12
GLN
10
A
GLN
11
n
13
GLN
11
A
LEU
12
n
14
LEU
12
A
LYS
13
n
15
LYS
13
A
SER
14
n
16
SER
14
A
ALA
15
n
17
ALA
15
A
GLY
16
n
18
GLY
16
A
ILE
17
n
19
ILE
17
A
GLY
18
n
20
GLY
18
A
PHE
19
n
21
PHE
19
A
ASN
20
n
22
ASN
20
A
ALA
21
n
23
ALA
21
A
THR
22
n
24
THR
22
A
GLU
23
n
25
GLU
23
A
LEU
24
n
26
LEU
24
A
HIS
25
n
27
HIS
25
A
GLY
26
n
28
GLY
26
A
PHE
27
n
29
PHE
27
A
LEU
28
n
30
LEU
28
A
SER
29
n
31
SER
29
A
GLY
30
n
32
GLY
30
A
LEU
31
n
33
LEU
31
A
LEU
32
n
34
LEU
32
A
CYS
33
n
35
CYS
33
A
GLY
34
n
36
GLY
34
A
GLY
35
n
37
GLY
35
A
LEU
36
n
38
LEU
36
A
LYS
37
n
39
LYS
37
A
ASP
38
n
40
ASP
38
A
GLN
39
n
41
GLN
39
A
SER
40
n
42
SER
40
A
TRP
41
n
43
TRP
41
A
LEU
42
n
44
LEU
42
A
PRO
43
n
45
PRO
43
A
LEU
44
n
46
LEU
44
A
LEU
45
n
47
LEU
45
A
TYR
46
n
48
TYR
46
A
GLN
47
n
49
GLN
47
A
PHE
48
n
50
PHE
48
A
SER
49
n
51
SER
49
A
ASN
50
n
52
ASN
50
A
ASP
51
n
53
ASP
51
A
ASN
52
n
54
ASN
52
A
HIS
53
n
55
HIS
53
A
ALA
54
n
56
ALA
54
A
TYR
55
n
57
TYR
55
A
PRO
56
n
58
PRO
56
A
THR
57
n
59
THR
57
A
GLY
58
n
60
GLY
58
A
LEU
59
n
61
LEU
59
A
VAL
60
n
62
VAL
60
A
GLN
61
n
63
GLN
61
A
PRO
62
n
64
PRO
62
A
VAL
63
n
65
VAL
63
A
THR
64
n
66
THR
64
A
GLU
65
n
67
GLU
65
A
LEU
66
n
68
LEU
66
A
TYR
67
n
69
TYR
67
A
GLU
68
n
70
GLU
68
A
GLN
69
n
71
GLN
69
A
ILE
70
n
72
ILE
70
A
SER
71
n
73
SER
71
A
GLN
72
n
74
GLN
72
A
THR
73
n
75
THR
73
A
LEU
74
n
76
LEU
74
A
SER
75
n
77
SER
75
A
ASP
76
n
78
ASP
76
A
VAL
77
n
79
VAL
77
A
GLU
78
n
80
GLU
78
A
GLY
79
n
81
GLY
79
A
PHE
80
n
82
PHE
80
A
THR
81
n
83
THR
81
A
PHE
82
n
84
PHE
82
A
GLU
83
n
85
GLU
83
A
LEU
84
n
86
LEU
84
A
GLY
85
n
87
GLY
85
A
LEU
86
n
88
LEU
86
A
THR
87
n
89
THR
87
A
GLU
88
n
90
GLU
88
A
ASP
89
n
91
ASP
89
A
GLU
90
n
92
GLU
90
A
ASN
91
n
93
ASN
91
A
VAL
92
n
94
VAL
92
A
PHE
93
n
95
PHE
93
A
THR
94
n
96
THR
94
A
GLN
95
n
97
GLN
95
A
ALA
96
n
98
ALA
96
A
ASP
97
n
99
ASP
97
A
SER
98
n
100
SER
98
A
LEU
99
n
101
LEU
99
A
SER
100
n
102
SER
100
A
ASP
101
n
103
ASP
101
A
TRP
102
n
104
TRP
102
A
ALA
103
n
105
ALA
103
A
ASN
104
n
106
ASN
104
A
GLN
105
n
107
GLN
105
A
PHE
106
n
108
PHE
106
A
LEU
107
n
109
LEU
107
A
LEU
108
n
110
LEU
108
A
GLY
109
n
111
GLY
109
A
ILE
110
n
112
ILE
110
A
GLY
111
n
113
GLY
111
A
LEU
112
n
114
LEU
112
A
ALA
113
n
115
ALA
113
A
GLN
114
n
116
GLN
114
A
PRO
115
n
117
PRO
115
A
GLU
116
n
118
GLU
116
A
LEU
117
n
119
LEU
117
A
ALA
118
n
120
ALA
118
A
LYS
119
n
121
LYS
119
A
GLU
120
n
122
GLU
120
A
LYS
121
n
123
LYS
121
A
GLY
122
n
124
GLY
122
A
GLU
123
n
125
GLU
123
A
ILE
124
n
126
ILE
124
A
GLY
125
n
127
GLY
125
A
GLU
126
n
128
GLU
126
A
ALA
127
n
129
ALA
127
A
VAL
128
n
130
VAL
128
A
ASP
129
n
131
ASP
129
A
ASP
130
n
132
ASP
130
A
LEU
131
n
133
LEU
131
A
GLN
132
n
134
GLN
132
A
ASP
133
n
135
ASP
133
A
ILE
134
n
136
ILE
134
A
CYS
135
n
137
CYS
135
A
GLN
136
n
138
GLN
136
A
LEU
137
n
139
LEU
137
A
GLY
138
n
140
GLY
138
A
TYR
139
n
141
TYR
139
A
ASP
140
n
142
ASP
140
A
GLU
141
n
143
GLU
141
A
ASP
142
n
144
ASP
142
A
ASP
143
n
145
ASP
143
A
ASN
144
n
146
ASN
144
A
GLU
145
n
147
GLU
145
A
GLU
146
n
148
GLU
146
A
GLU
147
n
149
GLU
147
A
LEU
148
n
150
LEU
148
A
ALA
149
n
151
ALA
149
A
GLU
150
n
152
GLU
150
A
ALA
151
n
153
ALA
151
A
LEU
152
n
154
LEU
152
A
GLU
153
n
155
GLU
153
A
GLU
154
n
156
GLU
154
A
ILE
155
n
157
ILE
155
A
ILE
156
n
158
ILE
156
A
GLU
157
n
159
GLU
157
A
TYR
158
n
160
TYR
158
A
VAL
159
n
161
VAL
159
A
ARG
160
n
162
ARG
160
A
THR
161
n
163
THR
161
A
ILE
162
n
164
ILE
162
A
ALA
163
n
165
ALA
163
A
MSE
164
n
166
MSE
164
A
LEU
165
n
167
LEU
165
A
PHE
166
n
168
PHE
166
A
TYR
167
n
169
TYR
167
A
SER
168
n
170
SER
168
A
HIS
169
n
171
HIS
169
A
PHE
170
n
172
PHE
170
A
ASN
171
n
173
ASN
171
A
n
174
172
A
n
175
173
A
n
176
174
A
n
177
175
A
n
178
176
A
n
179
177
A
n
180
178
A
n
181
179
A
n
182
180
A
n
183
181
A
n
184
182
A
author_defined_assembly
2
dimeric
A
MSE
8
SELENOMETHIONINE
A
MSE
10
MET
A
MSE
164
SELENOMETHIONINE
A
MSE
166
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_466
y-1,x+1,-z+1
crystal symmetry operation
-42.3000000000
42.3000000000
198.5000000000
1
A
GLY
-1
A
GLY
1
1
Y
1
A
SER
0
A
SER
2
1
Y
1
A
MSE
1
A
MSE
3
1
Y
1
A
GLU
172
A
GLU
174
1
Y
1
A
GLY
173
A
GLY
175
1
Y
1
A
GLU
174
A
GLU
176
1
Y
1
A
ILE
175
A
ILE
177
1
Y
1
A
GLU
176
A
GLU
178
1
Y
1
A
SER
177
A
SER
179
1
Y
1
A
LYS
178
A
LYS
180
1
Y
1
A
PRO
179
A
PRO
181
1
Y
1
A
VAL
180
A
VAL
182
1
Y
1
A
LEU
181
A
LEU
183
1
Y
1
A
HIS
182
A
HIS
184
1
Y
1
A
A
O
N
ASP
GLU
76
78
2.05
1
A
A
CB
SG
CYS
CYS
135
135
-0.114
0.016
1.812
1.698
N
1
A
A
OE2
OE1
GLU
GLU
126
157
2.15
1_555
7_466
1
A
ASP
38
-107.50
-160.75
1
A
ASN
50
-150.02
29.42
1
A
ASP
76
83.07
52.73
1
A
VAL
77
-47.15
81.83
1
A
GLU
78
45.41
75.56
1
A
LYS
121
-119.25
-159.69
1
A
ASP
140
171.32
-175.10
1
A
GLU
141
88.02
-178.09
1
A
ASN
144
56.03
13.31
38
0.255
0.194
1.95
20.0
951
14054
13482
95.9
random
1
THROUGHOUT
0
MAD
Engh & Huber
1.95
20.0
201
1537
0
0
1336
0.02
1.8
0.305
0.215
2.02
84
1193
1.95
20
1IZM
14167
14167
0
0
0.05
1
21.1
97.9
0.097
1.95
2.02
91.9
data reduction
DENZO
data scaling
SCALEPACK
phasing
SOLVE
model building
RESOLVE
refinement
CNS
1.0
phasing
RESOLVE
Structure of ygfB from Haemophilus influenzae (HI0817), a Conserved Hypothetical Protein
1
N
N
2
N
N
Dimer.The asymmetric unit contains one monomer.
The dimer is generated from the monomer by a crystallographic symmetry:
Y-1, X+1,-Z+1
A
SER
4
A
SER
6
HELX_P
A
ALA
15
A
ALA
17
1
1
12
A
ASN
20
A
ASN
22
HELX_P
A
GLY
34
A
GLY
36
1
2
15
A
SER
40
A
SER
42
HELX_P
A
ASN
50
A
ASN
52
1
3
11
A
LEU
59
A
LEU
61
HELX_P
A
SER
75
A
SER
77
1
4
17
A
ASN
91
A
ASN
93
HELX_P
A
GLN
114
A
GLN
116
1
5
24
A
GLU
116
A
GLU
118
HELX_P
A
GLU
120
A
GLU
122
5
6
5
A
LYS
121
A
LYS
123
HELX_P
A
CYS
135
A
CYS
137
1
7
15
A
GLU
145
A
GLU
147
HELX_P
A
ASN
171
A
ASN
173
1
8
27
covale
1.322
both
A
ASP
7
A
C
ASP
9
1_555
A
MSE
8
A
N
MSE
10
1_555
covale
1.337
both
A
MSE
8
A
C
MSE
10
1_555
A
ASN
9
A
N
ASN
11
1_555
covale
1.325
both
A
ALA
163
A
C
ALA
165
1_555
A
MSE
164
A
N
MSE
166
1_555
covale
1.329
both
A
MSE
164
A
C
MSE
166
1_555
A
LEU
165
A
N
LEU
167
1_555
STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Structural genomics, hypothetical protein, HI0817, ygfB, Structure 2 Function Project, S2F, UNKNOWN FUNCTION
Y817_HAEIN
UNP
1
1
P44882
MLISHSDLNQQLKSAGIGFNATELHGFLSGLLCGGLKDQSWLPLLYQFSNDNHAYPTGLVQPVTELYEQISQTLSDVEGF
TFELGLTEDENVFTQADSLSDWANQFLLGIGLAQPELAKEKGEIGEAVDDLQDICQLGYDEDDNEEELAEALEEIIEYVR
TIAMLFYSHFNEGEIESKPVLH
1
182
1IZM
1
182
P44882
A
1
3
184
1
cloning artifact
GLY
-1
1IZM
A
P44882
UNP
1
1
cloning artifact
SER
0
1IZM
A
P44882
UNP
2
1
MET
modified residue
MSE
1
1IZM
A
P44882
UNP
1
3
1
LEU
engineered mutation
MSE
8
1IZM
A
P44882
UNP
8
10
1
MET
modified residue
MSE
164
1IZM
A
P44882
UNP
164
166
96
P 43 21 2