0.013177
0.007608
0.000000
0.000000
0.015215
0.000000
0.000000
0.000000
0.009263
0.00000
0.00000
0.00000
Shi, N.
Ding, Y.
Qiang, B.Q.
Yuan, J.G.
Rao, Z.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
75.890
75.890
107.960
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
SE
N
258
N
C
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
Y
275
N
C
Y
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
N
298
N
C
N
299
N
C
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
N
C
N
315
N
O
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
R
C
N
329
N
O
N
330
N
C
N
331
N
O
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
N
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
N
379
N
O
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
N
397
N
C
N
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
Y
267
N
doub
Y
268
N
sing
Y
269
N
sing
N
270
N
sing
Y
271
N
doub
N
272
N
sing
Y
273
N
doub
N
274
N
sing
Y
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
Y
336
N
doub
Y
337
N
sing
Y
338
N
sing
N
339
N
sing
Y
340
N
doub
Y
341
N
sing
Y
342
N
sing
N
343
N
sing
Y
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
doub
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
Y
364
N
doub
Y
365
N
sing
Y
366
N
sing
N
367
N
sing
Y
368
N
doub
N
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
doub
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
To be Published
0353
Crystal Structure Analysis of the Dok-5 PTB Domain
10.2210/pdb1j0w/pdb
pdb_00001j0w
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2002-04-14
SBC-2
osmic mirror
MAD
M
x-ray
1
0.97945
1.0
0.97959
1.0
0.95372
1.0
19-ID
APS
0.97945, 0.97959, 0.95372
SYNCHROTRON
APS BEAMLINE 19-ID
12125.414
downstream of tyrosine kinase 5
2.7.1.112
2
man
polymer
18.015
water
81
nat
water
DOK-5 PTB DOMAIN
no
yes
REQSERFNVYL(MSE)PSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEAGR(MSE)CET
GEGLFIFQTRDGEAIYQKVHSAALAIAELER
REQSERFNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEAGRMCETGEGLFIFQ
TRDGEAIYQKVHSAALAIAELER
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
DOK5
9606
Homo sapiens
562
Escherichia coli
1
3.70
66.47
VAPOR DIFFUSION, HANGING DROP
7.5
ammonium sulfate, hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
struct_conn
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2003-12-16
1
1
2008-04-27
1
2
2011-07-13
1
3
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
PDBJ
Y
PDBJ
2002-11-25
REL
REL
HOH
water
TIP
6
2
HOH
HOH
110
A
TIP
9
2
HOH
HOH
111
A
TIP
10
2
HOH
HOH
112
A
TIP
11
2
HOH
HOH
113
A
TIP
13
2
HOH
HOH
114
A
TIP
17
2
HOH
HOH
115
A
TIP
19
2
HOH
HOH
116
A
TIP
20
2
HOH
HOH
117
A
TIP
21
2
HOH
HOH
118
A
TIP
23
2
HOH
HOH
119
A
TIP
25
2
HOH
HOH
120
A
TIP
27
2
HOH
HOH
121
A
TIP
28
2
HOH
HOH
122
A
TIP
31
2
HOH
HOH
123
A
TIP
35
2
HOH
HOH
124
A
TIP
36
2
HOH
HOH
125
A
TIP
37
2
HOH
HOH
126
A
TIP
38
2
HOH
HOH
127
A
TIP
42
2
HOH
HOH
128
A
TIP
44
2
HOH
HOH
129
A
TIP
48
2
HOH
HOH
130
A
TIP
52
2
HOH
HOH
131
A
TIP
53
2
HOH
HOH
132
A
TIP
58
2
HOH
HOH
133
A
TIP
60
2
HOH
HOH
134
A
TIP
62
2
HOH
HOH
135
A
TIP
65
2
HOH
HOH
136
A
TIP
67
2
HOH
HOH
137
A
TIP
68
2
HOH
HOH
138
A
TIP
71
2
HOH
HOH
139
A
TIP
73
2
HOH
HOH
140
A
TIP
74
2
HOH
HOH
141
A
TIP
76
2
HOH
HOH
142
A
TIP
77
2
HOH
HOH
143
A
TIP
79
2
HOH
HOH
144
A
TIP
85
2
HOH
HOH
145
A
TIP
87
2
HOH
HOH
146
A
TIP
1
2
HOH
HOH
110
B
TIP
2
2
HOH
HOH
111
B
TIP
3
2
HOH
HOH
112
B
TIP
4
2
HOH
HOH
113
B
TIP
5
2
HOH
HOH
114
B
TIP
7
2
HOH
HOH
115
B
TIP
8
2
HOH
HOH
116
B
TIP
12
2
HOH
HOH
117
B
TIP
14
2
HOH
HOH
118
B
TIP
15
2
HOH
HOH
119
B
TIP
16
2
HOH
HOH
120
B
TIP
18
2
HOH
HOH
121
B
TIP
22
2
HOH
HOH
122
B
TIP
24
2
HOH
HOH
123
B
TIP
26
2
HOH
HOH
124
B
TIP
29
2
HOH
HOH
125
B
TIP
30
2
HOH
HOH
126
B
TIP
32
2
HOH
HOH
127
B
TIP
33
2
HOH
HOH
128
B
TIP
39
2
HOH
HOH
129
B
TIP
40
2
HOH
HOH
130
B
TIP
41
2
HOH
HOH
131
B
TIP
43
2
HOH
HOH
132
B
TIP
45
2
HOH
HOH
133
B
TIP
46
2
HOH
HOH
134
B
TIP
47
2
HOH
HOH
135
B
TIP
49
2
HOH
HOH
136
B
TIP
50
2
HOH
HOH
137
B
TIP
54
2
HOH
HOH
138
B
TIP
55
2
HOH
HOH
139
B
TIP
56
2
HOH
HOH
140
B
TIP
59
2
HOH
HOH
141
B
TIP
61
2
HOH
HOH
142
B
TIP
63
2
HOH
HOH
143
B
TIP
64
2
HOH
HOH
144
B
TIP
66
2
HOH
HOH
145
B
TIP
69
2
HOH
HOH
146
B
TIP
70
2
HOH
HOH
147
B
TIP
72
2
HOH
HOH
148
B
TIP
81
2
HOH
HOH
149
B
TIP
82
2
HOH
HOH
150
B
TIP
83
2
HOH
HOH
151
B
TIP
84
2
HOH
HOH
152
B
TIP
86
2
HOH
HOH
153
B
n
1
7
A
n
2
8
A
GLN
9
n
3
GLN
9
A
SER
10
n
4
SER
10
A
GLU
11
n
5
GLU
11
A
ARG
12
n
6
ARG
12
A
PHE
13
n
7
PHE
13
A
ASN
14
n
8
ASN
14
A
VAL
15
n
9
VAL
15
A
TYR
16
n
10
TYR
16
A
LEU
17
n
11
LEU
17
A
MSE
18
n
12
MSE
18
A
PRO
19
n
13
PRO
19
A
SER
20
n
14
SER
20
A
PRO
21
n
15
PRO
21
A
ASN
22
n
16
ASN
22
A
LEU
23
n
17
LEU
23
A
ASP
24
n
18
ASP
24
A
VAL
25
n
19
VAL
25
A
HIS
26
n
20
HIS
26
A
GLY
27
n
21
GLY
27
A
GLU
28
n
22
GLU
28
A
CYS
29
n
23
CYS
29
A
ALA
30
n
24
ALA
30
A
LEU
31
n
25
LEU
31
A
GLN
32
n
26
GLN
32
A
ILE
33
n
27
ILE
33
A
THR
34
n
28
THR
34
A
TYR
35
n
29
TYR
35
A
GLU
36
n
30
GLU
36
A
TYR
37
n
31
TYR
37
A
ILE
38
n
32
ILE
38
A
CYS
39
n
33
CYS
39
A
LEU
40
n
34
LEU
40
A
TRP
41
n
35
TRP
41
A
ASP
42
n
36
ASP
42
A
VAL
43
n
37
VAL
43
A
GLN
44
n
38
GLN
44
A
ASN
45
n
39
ASN
45
A
PRO
46
n
40
PRO
46
A
ARG
47
n
41
ARG
47
A
VAL
48
n
42
VAL
48
A
LYS
49
n
43
LYS
49
A
LEU
50
n
44
LEU
50
A
ILE
51
n
45
ILE
51
A
SER
52
n
46
SER
52
A
TRP
53
n
47
TRP
53
A
PRO
54
n
48
PRO
54
A
LEU
55
n
49
LEU
55
A
SER
56
n
50
SER
56
A
ALA
57
n
51
ALA
57
A
LEU
58
n
52
LEU
58
A
ARG
59
n
53
ARG
59
A
ARG
60
n
54
ARG
60
A
TYR
61
n
55
TYR
61
A
GLY
62
n
56
GLY
62
A
ARG
63
n
57
ARG
63
A
ASP
64
n
58
ASP
64
A
THR
65
n
59
THR
65
A
THR
66
n
60
THR
66
A
TRP
67
n
61
TRP
67
A
PHE
68
n
62
PHE
68
A
THR
69
n
63
THR
69
A
PHE
70
n
64
PHE
70
A
GLU
71
n
65
GLU
71
A
ALA
72
n
66
ALA
72
A
GLY
73
n
67
GLY
73
A
ARG
74
n
68
ARG
74
A
MET
75
n
69
MSE
75
A
CYS
76
n
70
CYS
76
A
GLU
77
n
71
GLU
77
A
THR
78
n
72
THR
78
A
GLY
79
n
73
GLY
79
A
GLU
80
n
74
GLU
80
A
GLY
81
n
75
GLY
81
A
LEU
82
n
76
LEU
82
A
PHE
83
n
77
PHE
83
A
ILE
84
n
78
ILE
84
A
PHE
85
n
79
PHE
85
A
GLN
86
n
80
GLN
86
A
THR
87
n
81
THR
87
A
ARG
88
n
82
ARG
88
A
ASP
89
n
83
ASP
89
A
GLY
90
n
84
GLY
90
A
GLU
91
n
85
GLU
91
A
ALA
92
n
86
ALA
92
A
ILE
93
n
87
ILE
93
A
TYR
94
n
88
TYR
94
A
GLN
95
n
89
GLN
95
A
LYS
96
n
90
LYS
96
A
VAL
97
n
91
VAL
97
A
HIS
98
n
92
HIS
98
A
SER
99
n
93
SER
99
A
ALA
100
n
94
ALA
100
A
ALA
101
n
95
ALA
101
A
LEU
102
n
96
LEU
102
A
ALA
103
n
97
ALA
103
A
ILE
104
n
98
ILE
104
A
ALA
105
n
99
ALA
105
A
GLU
106
n
100
GLU
106
A
LEU
107
n
101
LEU
107
A
n
102
108
A
n
103
109
A
ARG
7
n
1
ARG
7
B
GLU
8
n
2
GLU
8
B
GLN
9
n
3
GLN
9
B
SER
10
n
4
SER
10
B
GLU
11
n
5
GLU
11
B
ARG
12
n
6
ARG
12
B
PHE
13
n
7
PHE
13
B
ASN
14
n
8
ASN
14
B
VAL
15
n
9
VAL
15
B
TYR
16
n
10
TYR
16
B
LEU
17
n
11
LEU
17
B
MSE
18
n
12
MSE
18
B
PRO
19
n
13
PRO
19
B
SER
20
n
14
SER
20
B
PRO
21
n
15
PRO
21
B
ASN
22
n
16
ASN
22
B
LEU
23
n
17
LEU
23
B
ASP
24
n
18
ASP
24
B
VAL
25
n
19
VAL
25
B
HIS
26
n
20
HIS
26
B
GLY
27
n
21
GLY
27
B
GLU
28
n
22
GLU
28
B
CYS
29
n
23
CYS
29
B
ALA
30
n
24
ALA
30
B
LEU
31
n
25
LEU
31
B
GLN
32
n
26
GLN
32
B
ILE
33
n
27
ILE
33
B
THR
34
n
28
THR
34
B
TYR
35
n
29
TYR
35
B
GLU
36
n
30
GLU
36
B
TYR
37
n
31
TYR
37
B
ILE
38
n
32
ILE
38
B
CYS
39
n
33
CYS
39
B
LEU
40
n
34
LEU
40
B
TRP
41
n
35
TRP
41
B
ASP
42
n
36
ASP
42
B
VAL
43
n
37
VAL
43
B
GLN
44
n
38
GLN
44
B
ASN
45
n
39
ASN
45
B
PRO
46
n
40
PRO
46
B
ARG
47
n
41
ARG
47
B
VAL
48
n
42
VAL
48
B
LYS
49
n
43
LYS
49
B
LEU
50
n
44
LEU
50
B
ILE
51
n
45
ILE
51
B
SER
52
n
46
SER
52
B
TRP
53
n
47
TRP
53
B
PRO
54
n
48
PRO
54
B
LEU
55
n
49
LEU
55
B
SER
56
n
50
SER
56
B
ALA
57
n
51
ALA
57
B
LEU
58
n
52
LEU
58
B
ARG
59
n
53
ARG
59
B
ARG
60
n
54
ARG
60
B
TYR
61
n
55
TYR
61
B
GLY
62
n
56
GLY
62
B
ARG
63
n
57
ARG
63
B
ASP
64
n
58
ASP
64
B
THR
65
n
59
THR
65
B
THR
66
n
60
THR
66
B
TRP
67
n
61
TRP
67
B
PHE
68
n
62
PHE
68
B
THR
69
n
63
THR
69
B
PHE
70
n
64
PHE
70
B
GLU
71
n
65
GLU
71
B
ALA
72
n
66
ALA
72
B
GLY
73
n
67
GLY
73
B
ARG
74
n
68
ARG
74
B
MET
75
n
69
MSE
75
B
CYS
76
n
70
CYS
76
B
GLU
77
n
71
GLU
77
B
THR
78
n
72
THR
78
B
GLY
79
n
73
GLY
79
B
GLU
80
n
74
GLU
80
B
GLY
81
n
75
GLY
81
B
LEU
82
n
76
LEU
82
B
PHE
83
n
77
PHE
83
B
ILE
84
n
78
ILE
84
B
PHE
85
n
79
PHE
85
B
GLN
86
n
80
GLN
86
B
THR
87
n
81
THR
87
B
ARG
88
n
82
ARG
88
B
ASP
89
n
83
ASP
89
B
GLY
90
n
84
GLY
90
B
GLU
91
n
85
GLU
91
B
ALA
92
n
86
ALA
92
B
ILE
93
n
87
ILE
93
B
TYR
94
n
88
TYR
94
B
GLN
95
n
89
GLN
95
B
LYS
96
n
90
LYS
96
B
VAL
97
n
91
VAL
97
B
HIS
98
n
92
HIS
98
B
SER
99
n
93
SER
99
B
ALA
100
n
94
ALA
100
B
ALA
101
n
95
ALA
101
B
LEU
102
n
96
LEU
102
B
ALA
103
n
97
ALA
103
B
ILE
104
n
98
ILE
104
B
ALA
105
n
99
ALA
105
B
GLU
106
n
100
GLU
106
B
LEU
107
n
101
LEU
107
B
GLU
108
n
102
GLU
108
B
ARG
109
n
103
ARG
109
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
A
MSE
18
SELENOMETHIONINE
A
MSE
12
MET
A
MSE
75
SELENOMETHIONINE
A
MSE
69
MET
B
MSE
18
SELENOMETHIONINE
B
MSE
12
MET
B
MSE
75
SELENOMETHIONINE
B
MSE
69
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
50
A
O
LEU
44
A
N
LEU
40
A
N
LEU
34
A
O
CYS
39
A
O
CYS
33
A
N
GLN
32
A
N
GLN
26
A
O
LEU
31
A
O
LEU
25
A
N
PHE
13
A
N
PHE
7
A
N
TYR
16
A
N
TYR
10
A
O
GLN
86
A
O
GLN
80
A
O
GLY
81
A
O
GLY
75
A
N
ALA
72
A
N
ALA
66
A
O
THR
69
A
O
THR
63
A
N
GLY
62
A
N
GLY
56
B
O
LEU
50
B
O
LEU
44
B
N
LEU
40
B
N
LEU
34
B
O
CYS
39
B
O
CYS
33
B
N
GLN
32
B
N
GLN
26
B
O
LEU
31
B
O
LEU
25
B
N
PHE
13
B
N
PHE
7
B
N
TYR
16
B
N
TYR
10
B
O
GLN
86
B
O
GLN
80
B
O
PHE
85
B
O
PHE
79
B
N
PHE
68
B
N
PHE
62
B
O
GLU
71
B
O
GLU
65
B
N
ARG
60
B
N
ARG
54
1
A
ARG
7
A
ARG
1
1
Y
1
A
GLU
8
A
GLU
2
1
Y
1
A
GLU
108
A
GLU
102
1
Y
1
A
ARG
109
A
ARG
103
1
Y
1
A
TYR
35
0.092
SIDE CHAIN
1
14.13
2.30
115.30
129.43
B
B
B
CA
CB
CG
LEU
LEU
LEU
31
31
31
N
1
A
SER
10
-2.73
176.29
1
A
PRO
46
-69.64
9.62
1
A
ARG
59
-75.05
-81.18
1
A
TYR
61
-172.16
131.41
1
B
SER
10
-170.18
-27.95
1
B
PRO
46
-59.11
-6.36
1
B
ARG
63
-170.47
-179.39
1
B
ASP
64
-163.61
-160.74
1
B
ASP
89
-99.36
33.42
protein_rep.param
water.param
-6.727
-7.452
0.000
-6.727
0.000
13.454
0.2696
0.2259
2.5
20
2175
24036
23018
random
1
0.0
MAD
Engh & Huber
2.5
20
81
1734
0
0
1653
2.3
50
1J0W
132314
132288
0.0
0.0
1
99.98
2.3
50
99.4
data reduction
DENZO
data scaling
SCALEPACK
refinement
CNS
phasing
CNS
Crystal Structure Analysis of the Dok-5 PTB Domain
1
N
N
1
N
N
2
N
N
2
N
N
The second part of the biological assembly is generated by the two fold axis.
A
ASP
89
A
ASP
83
HELX_P
A
ILE
104
A
ILE
98
1
1
16
B
ASP
89
B
ASP
83
HELX_P
B
ARG
109
B
ARG
103
1
2
21
covale
1.321
both
A
LEU
17
A
C
LEU
11
1_555
A
MSE
18
A
N
MSE
12
1_555
covale
1.346
both
A
MSE
18
A
C
MSE
12
1_555
A
PRO
19
A
N
PRO
13
1_555
covale
1.337
both
A
ARG
74
A
C
ARG
68
1_555
A
MSE
75
A
N
MSE
69
1_555
covale
1.333
both
A
MSE
75
A
C
MSE
69
1_555
A
CYS
76
A
N
CYS
70
1_555
covale
1.326
both
B
LEU
17
B
C
LEU
11
1_555
B
MSE
18
B
N
MSE
12
1_555
covale
1.357
both
B
MSE
18
B
C
MSE
12
1_555
B
PRO
19
B
N
PRO
13
1_555
covale
1.331
both
B
ARG
74
B
C
ARG
68
1_555
B
MSE
75
B
N
MSE
69
1_555
covale
1.338
both
B
MSE
75
B
C
MSE
69
1_555
B
CYS
76
B
N
CYS
70
1_555
TRANSFERASE
BETA STRANDS, ALFA HELIX, TRANSFERASE
DOK5_HUMAN
UNP
1
7
Q9P104
REQSERFNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEAGRMCETGEGLFIFQ
TRDGEAIYQKVHSAALAIAE
133
232
1J0W
7
106
Q9P104
A
1
1
100
133
232
1J0W
7
106
Q9P104
B
1
1
100
1
MET
modified residue
MSE
18
1J0W
A
Q9P104
UNP
144
12
1
MET
modified residue
MSE
75
1J0W
A
Q9P104
UNP
201
69
1
cloning artifact
LEU
107
1J0W
A
Q9P104
UNP
101
1
cloning artifact
GLU
108
1J0W
A
Q9P104
UNP
102
1
cloning artifact
ARG
109
1J0W
A
Q9P104
UNP
103
2
MET
modified residue
MSE
18
1J0W
B
Q9P104
UNP
144
12
2
MET
modified residue
MSE
75
1J0W
B
Q9P104
UNP
201
69
2
cloning artifact
LEU
107
1J0W
B
Q9P104
UNP
101
2
cloning artifact
GLU
108
1J0W
B
Q9P104
UNP
102
2
cloning artifact
ARG
109
1J0W
B
Q9P104
UNP
103
7
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
49
A
LYS
43
A
PRO
54
A
PRO
48
A
TYR
37
A
TYR
31
A
ASP
42
A
ASP
36
A
GLY
27
A
GLY
21
A
ILE
33
A
ILE
27
A
ARG
12
A
ARG
6
A
LEU
17
A
LEU
11
A
GLY
81
A
GLY
75
A
GLN
86
A
GLN
80
A
TRP
67
A
TRP
61
A
ALA
72
A
ALA
66
A
LEU
58
A
LEU
52
A
ARG
63
A
ARG
57
B
LYS
49
B
LYS
43
B
PRO
54
B
PRO
48
B
TYR
37
B
TYR
31
B
TRP
41
B
TRP
35
B
GLY
27
B
GLY
21
B
ILE
33
B
ILE
27
B
PHE
13
B
PHE
7
B
LEU
17
B
LEU
11
B
GLY
81
B
GLY
75
B
GLN
86
B
GLN
80
B
TRP
67
B
TRP
61
B
ALA
72
B
ALA
66
B
LEU
58
B
LEU
52
B
ARG
63
B
ARG
57
154
P 32 2 1