0.011520
0.006651
0.000000
0.000000
0.013302
0.000000
0.000000
0.000000
0.006407
0.00000
0.00000
0.00000
Kobayashi, T.
Nureki, O.
Ishitani, R.
Tukalo, M.
Cusack, S.
Sakamoto, K.
Yokoyama, S.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
86.805
86.805
156.075
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
Y
18
N
C
N
19
N
N
Y
20
N
N
Y
21
N
C
Y
22
N
N
Y
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
N
N
39
S
C
N
40
N
C
N
41
N
O
N
42
N
C
N
43
N
O
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
N
N
52
S
C
N
53
N
C
N
54
N
O
N
55
N
C
N
56
N
C
N
57
N
C
N
58
N
N
N
59
N
C
N
60
N
N
N
61
N
N
N
62
N
O
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
N
N
79
S
C
N
80
N
C
N
81
N
O
N
82
N
C
N
83
N
C
N
84
N
O
N
85
N
N
N
86
N
O
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
O
N
112
N
P
N
113
N
O
N
114
N
O
N
115
N
O
N
116
N
C
N
117
R
C
N
118
N
O
N
119
S
C
N
120
N
O
N
121
R
C
N
122
N
O
N
123
R
C
N
124
N
N
N
125
N
C
N
126
N
O
N
127
N
N
N
128
N
C
N
129
N
N
N
130
N
C
N
131
N
C
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
R
C
N
148
N
C
N
149
N
O
N
150
N
C
N
151
N
S
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
O
N
161
N
P
N
162
N
O
N
163
N
O
N
164
N
O
N
165
N
C
N
166
R
C
N
167
N
O
N
168
S
C
N
169
N
O
N
170
R
C
N
171
N
O
N
172
R
C
Y
173
N
N
Y
174
N
C
Y
175
N
N
Y
176
N
C
N
177
N
C
N
178
N
O
N
179
N
N
N
180
N
C
N
181
N
N
N
182
N
N
Y
183
N
C
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
N
N
199
S
C
N
200
N
C
N
201
N
O
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
N
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
N
N
219
S
C
N
220
N
C
N
221
N
O
N
222
N
C
N
223
N
C
N
224
N
C
N
225
N
O
N
226
N
O
N
227
N
O
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
N
Y
254
N
C
Y
255
N
C
Y
256
N
N
N
257
N
O
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
N
N
272
S
C
N
273
N
C
N
274
N
O
N
275
S
C
N
276
N
C
N
277
N
C
N
278
N
C
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
N
298
N
C
N
299
N
C
N
300
N
C
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
N
C
N
320
N
C
N
321
N
C
N
322
N
C
N
323
N
N
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
C
N
345
N
C
N
346
N
S
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
MG
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
N
372
N
O
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
N
389
N
C
N
390
N
C
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
N
N
402
S
C
N
403
N
C
N
404
N
O
N
405
N
C
N
406
N
O
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
N
N
416
S
C
N
417
N
C
N
418
N
O
N
419
R
C
N
420
N
O
N
421
N
C
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
N
N
433
S
C
N
434
N
C
N
435
N
O
N
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
Y
440
N
C
Y
441
N
C
Y
442
N
C
N
443
N
O
N
444
N
O
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
O
N
457
N
P
N
458
N
O
N
459
N
O
N
460
N
O
N
461
N
C
N
462
R
C
N
463
N
O
N
464
S
C
N
465
N
O
N
466
R
C
N
467
N
O
N
468
R
C
N
469
N
N
N
470
N
C
N
471
N
O
N
472
N
N
N
473
N
C
N
474
N
O
N
475
N
C
N
476
N
C
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
N
N
491
S
C
N
492
N
C
N
493
N
O
N
494
N
C
N
495
N
C
N
496
N
C
N
497
N
O
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
Y
30
N
sing
Y
31
N
doub
N
32
N
sing
Y
33
N
doub
N
34
N
sing
N
35
N
sing
Y
36
N
sing
Y
37
N
doub
N
38
N
sing
Y
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
doub
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
doub
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
Y
182
N
sing
Y
183
N
sing
Y
184
N
doub
N
185
N
sing
Y
186
N
sing
N
187
N
sing
Y
188
N
doub
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
doub
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
doub
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
Y
255
N
sing
Y
256
N
doub
Y
257
N
doub
N
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
doub
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
Y
432
N
doub
Y
433
N
sing
Y
434
N
sing
N
435
N
sing
Y
436
N
doub
N
437
N
sing
Y
438
N
doub
N
439
N
sing
Y
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
doub
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
doub
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
doub
N
476
N
sing
N
477
N
doub
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
doub
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
US
NAT.STRUCT.BIOL.
NSBIEW
2024
1072-8368
10
425
432
10.1038/nsb934
12754495
Structural basis for orthogonal tRNA specificities of tyrosyl-tRNA synthetases for genetic code expansion
2003
10.2210/pdb1j1u/pdb
pdb_00001j1u
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
100
1
mirrors
CCD
2002-05-23
MARRESEARCH
mirrors
CCD
2002-06-13
MARRESEARCH
Si 111 CHANNEL
SINGLE WAVELENGTH
M
x-ray
1
Si 111 CHANNEL
SINGLE WAVELENGTH
M
x-ray
1
0.9132
1.0
0.9793
1.0
BL41XU
SPring-8
0.9132
SYNCHROTRON
SPRING-8 BEAMLINE BL41XU
BL41XU
SPring-8
0.9793
SYNCHROTRON
SPRING-8 BEAMLINE BL41XU
24804.752
tRNA(Tyr)
1
syn
polymer
35102.816
Tyrosyl-tRNA synthetase
6.1.1.1
1
man
polymer
24.305
MAGNESIUM ION
4
syn
non-polymer
181.189
TYROSINE
1
syn
non-polymer
18.015
water
364
nat
water
E.C.6.1.1.1
no
no
CCGGCGGUAGUUCAGCCUGGUAGAACGGCGGACUGUAGAUCCGCAUGUCGCUGGUUCAAAUCCGGCCCGCCGGACCA
CCGGCGGUAGUUCAGCCUGGUAGAACGGCGGACUGUAGAUCCGCAUGUCGCUGGUUCAAAUCCGGCCCGCCGGACCA
B
polyribonucleotide
no
no
MDEFEMIKRNTSEIISEEELREVLKKDEKSAYIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLHAYLNQKGELD
EIRKIGDYNKKVFEAMGLKAKYVYGSEFQLDKDYTLNVYRLALKTTLKRARRSMELIAREDENPKVAEVIYPIMQVNDIH
YLGVDVAVGGMEQRKIHMLARELLPKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDDSPEEIRAKIKKAYCPAGVVEGNP
IMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELHPMDLKNAVAEELIKILEPIRKRL
MDEFEMIKRNTSEIISEEELREVLKKDEKSAYIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLHAYLNQKGELD
EIRKIGDYNKKVFEAMGLKAKYVYGSEFQLDKDYTLNVYRLALKTTLKRARRSMELIAREDENPKVAEVIYPIMQVNDIH
YLGVDVAVGGMEQRKIHMLARELLPKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDDSPEEIRAKIKKAYCPAGVVEGNP
IMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELHPMDLKNAVAEELIKILEPIRKRL
A
my_001000009.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Methanocaldococcus
Escherichia
Escherichia coli
sample
TYRS
2190
Methanocaldococcus jannaschii
469008
Escherichia coli BL21(DE3)
BL21(DE3)
PLASMID
pET3A
2
2.76
55.11
VAPOR DIFFUSION, HANGING DROP
4.6
1,6-hexanediol, ammonium chloride, magnesium chloride, zinc acetate, sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 303K
303
1,6-hexanediol
1
ammonium chloride
1
magnesium chloride
1
zinc acetate
1
sodium acetate
1
ammonium chloride
2
magnesium chloride
2
zinc acetate
2
sodium acetate
2
12.958
1
19
B
501
B
573
3.641
B_C501:G573_B
1
-23.526
0.452
0.155
-0.189
2.909
1
19
B
502
B
572
1.183
B_C502:G572_B
2
-15.826
0.264
0.282
-0.222
0.879
1
19
B
503
B
571
0.059
B_G503:C571_B
3
-13.490
-0.009
0.295
-0.151
2.241
1
19
B
504
B
570
-0.333
B_G504:C570_B
4
-13.896
-0.202
0.169
-0.185
2.815
1
19
B
505
B
569
3.421
B_C505:G569_B
5
-13.222
0.204
0.118
-0.135
-6.577
1
19
B
506
B
568
1.838
B_G506:C568_B
6
-16.980
-0.262
0.100
-0.117
-9.284
1
19
B
507
B
567
-2.148
B_G507:C567_B
7
-7.111
-0.135
-0.244
-0.189
-4.634
1
19
B
550
B
566
-0.379
B_G550:C566_B
8
-11.343
-0.166
-0.011
-0.082
0.546
1
19
B
551
B
565
0.734
B_C551:G565_B
9
-15.416
0.243
-0.046
-0.246
-4.836
1
28
B
552
B
564
0.846
B_U552:G564_B
10
-9.719
2.333
0.126
-0.602
-6.233
1
19
B
553
B
563
1.904
B_G553:C563_B
11
-11.750
-0.343
-0.345
-0.207
-8.651
1
19
B
554
B
562
-1.981
B_G554:C562_B
12
-12.311
-0.363
-0.117
-0.100
-4.743
4
24
B
555
B
559
-100.925
B_U555:A559_B
13
8.563
4.035
0.264
-1.931
17.344
2
B
556
B
519
-94.099
B_U556:G519_B
14
17.140
0.666
0.320
-5.462
-24.416
B
537
B
534
-136.594
B_A537:U534_B
15
12.718
-4.136
-0.811
0.500
16.503
1
B
539
B
533
-12.739
B_A539:C533_B
16
-8.783
-4.090
0.904
-0.722
13.447
1
20
B
540
B
532
9.538
B_U540:A532_B
17
-22.170
-0.692
0.013
-0.205
5.504
1
B
541
B
531
-19.276
B_C541:G531_B
18
-16.020
-0.794
0.082
-0.145
-0.324
1
19
B
542
B
530
-1.406
B_C542:G530_B
19
-15.449
1.149
0.215
-0.666
-5.499
1
19
B
543
B
529
3.231
B_G543:C529_B
20
-16.876
0.472
0.397
0.012
-8.755
1
19
B
544
B
528
-5.683
B_C544:G528_B
21
-10.969
0.058
0.460
-0.341
-13.488
8
B
545
B
527
-26.335
B_A545:G527_B
22
-16.601
0.211
0.254
1.230
-5.174
1
19
B
510
B
526
0.346
B_G510:C526_B
23
-8.825
-0.527
0.020
-0.159
-12.144
1
20
B
511
B
525
1.698
B_U511:A525_B
24
-19.119
-0.024
0.338
-0.342
-5.008
1
20
B
512
B
524
-5.615
B_U512:A524_B
25
-8.303
-0.161
-0.327
-0.303
-1.510
1
19
B
513
B
523
5.450
B_C513:G523_B
26
-1.793
0.273
0.065
-0.214
5.256
4
24
B
514
B
508
-97.354
B_A514:U508_B
27
8.197
-3.854
0.619
-2.163
6.985
2
22
B
515
B
549
152.775
B_G515:C549_B
28
5.350
0.136
0.118
3.894
-22.334
1
19
B
520
B
557
2.623
B_G520:C557_B
29
-24.117
-0.329
-0.221
0.279
2.902
35.242
B
B
501
502
15.607
B
B
573
572
3.420
9.317
-0.485
-1.698
BB_C501C502:G572G573_BB
1
-4.584
7.679
33.724
-4.174
0.128
2.036
31.548
B
B
502
503
24.705
B
B
572
571
3.055
13.043
-0.232
-1.889
BB_C502G503:C571G572_BB
2
-1.480
2.803
28.751
-5.455
0.203
2.989
34.828
B
B
503
504
8.292
B
B
571
570
3.178
4.947
-0.562
-1.230
BB_G503G504:C570C571_BB
3
-0.719
1.205
34.479
-2.767
0.836
2.918
32.119
B
B
504
505
11.465
B
B
570
569
3.202
6.303
0.779
-1.280
BB_G504C505:G569C570_BB
4
0.920
-1.673
31.497
-3.382
-1.251
2.066
31.071
B
B
505
506
26.377
B
B
569
568
3.282
13.668
0.303
-2.076
BB_C505G506:C568G569_BB
5
0.002
-0.004
27.970
-6.138
-0.566
2.691
35.274
B
B
506
507
16.254
B
B
568
567
3.233
9.728
-0.754
-1.480
BB_G506G507:C567C568_BB
6
1.264
-2.113
33.925
-3.775
1.417
2.585
33.423
B
B
507
550
13.631
B
B
567
566
3.138
7.771
0.116
-2.071
BB_G507G550:C566C567_BB
7
-0.757
1.328
32.523
-4.742
-0.312
3.023
34.696
B
B
550
551
2.364
B
B
566
565
3.092
1.409
-0.633
-1.530
BB_G550C551:G565C566_BB
8
0.328
-0.551
34.667
-2.767
1.108
3.296
41.447
B
B
551
552
4.035
B
B
565
564
3.393
2.854
0.291
-1.383
BB_C551U552:G564G565_BB
9
0.124
-0.175
41.353
-2.265
-0.397
2.195
23.353
B
B
552
553
21.787
B
B
564
563
3.260
8.489
-0.026
-1.929
BB_U552G553:C563G564_BB
10
6.749
-17.322
20.714
-7.332
2.105
2.932
29.840
B
B
553
554
11.086
B
B
563
562
3.329
5.672
0.941
-2.082
BB_G553G554:C562C563_BB
11
1.723
-3.367
29.258
-5.184
-1.481
3.115
91.163
B
B
554
555
0.833
B
B
562
559
3.185
1.189
-2.000
-2.172
BB_G554U555:A559C562_BB
12
2.731
-1.912
91.125
-1.543
1.451
3.794
43.110
B
B
555
556
5.101
B
B
559
519
3.498
3.699
2.182
-1.783
BB_U555U556:G519A559_BB
13
11.999
-16.548
41.325
-2.841
-1.622
2.797
51.353
B
B
537
539
23.110
B
B
534
533
4.865
19.490
2.663
-3.465
BB_A537A539:C533U534_BB
14
-8.894
10.545
46.949
-5.648
-3.825
3.088
45.597
B
B
539
540
17.945
B
B
533
532
3.493
13.713
0.575
-0.902
BB_A539U540:A532C533_BB
15
-0.009
0.012
43.591
-2.405
-0.742
3.099
36.382
B
B
540
541
14.394
B
B
532
531
3.486
8.827
-0.708
-1.516
BB_U540C541:G531A532_BB
16
-8.276
13.495
34.376
-3.704
-0.061
3.271
43.538
B
B
541
542
7.757
B
B
531
530
3.433
5.737
0.588
-1.231
BB_C541C542:G530G531_BB
17
1.731
-2.341
43.143
-2.229
-0.621
2.278
28.096
B
B
542
543
20.903
B
B
530
529
3.159
9.936
0.351
-1.993
BB_C542G543:C529G530_BB
18
0.714
-1.501
26.304
-6.115
-0.578
3.035
33.137
B
B
543
544
4.496
B
B
529
528
3.187
2.561
-0.258
-1.785
BB_G543C544:G528C529_BB
19
0.982
-1.724
33.026
-3.541
0.610
2.798
33.910
B
B
544
545
8.392
B
B
528
527
3.222
4.866
-0.946
-1.811
BB_C544A545:G527G528_BB
20
4.260
-7.347
33.306
-3.831
2.257
2.346
64.518
B
B
545
510
4.572
B
B
527
526
2.894
4.867
-3.036
-2.761
BB_A545G510:C526G527_BB
21
8.016
-7.530
63.906
-2.753
3.118
3.011
37.883
B
B
510
511
11.614
B
B
526
525
3.303
7.490
-0.499
-1.335
BB_G510U511:A525C526_BB
22
-2.296
3.560
37.093
-2.993
0.481
2.557
33.325
B
B
511
512
11.893
B
B
525
524
2.944
6.756
-0.895
-0.942
BB_U511U512:A524A525_BB
23
4.504
-7.929
32.348
-2.602
2.200
2.907
28.678
B
B
512
513
11.113
B
B
524
523
3.300
5.471
1.822
-1.469
BB_U512C513:G523A524_BB
24
-0.939
1.906
28.147
-4.148
-3.881
3.129
65.043
B
B
513
514
-4.340
B
B
523
508
3.126
-4.663
-1.339
-0.556
BB_C513A514:U508G523_BB
25
1.351
-1.257
64.881
-0.331
1.299
3.582
-70.087
B
B
514
515
-6.553
B
B
508
549
3.355
7.514
1.824
-3.214
BB_A514G515:C549U508_BB
26
2.521
2.199
-69.694
2.515
1.684
RIKEN Structural Genomics/Proteomics Initiative
RSGI
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2003-06-03
1
1
2008-04-27
1
2
2011-07-13
1
3
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
PDBJ
Y
PDBJ
2002-12-17
REL
REL
MG
MAGNESIUM ION
TYR
TYROSINE
HOH
water
This sequence occurs in Methanococcus jannaschii.
sample
MG
1501
3
MG
MG
1501
B
MG
502
3
MG
MG
1502
B
MG
504
3
MG
MG
1503
B
MG
503
3
MG
MG
503
A
TYR
401
4
TYR
TYR
401
A
HOH
5
5
HOH
HOH
5
B
HOH
18
5
HOH
HOH
18
B
HOH
23
5
HOH
HOH
23
B
HOH
24
5
HOH
HOH
24
B
HOH
25
5
HOH
HOH
25
B
HOH
28
5
HOH
HOH
28
B
HOH
38
5
HOH
HOH
38
B
HOH
41
5
HOH
HOH
41
B
HOH
43
5
HOH
HOH
43
B
HOH
46
5
HOH
HOH
46
B
HOH
56
5
HOH
HOH
56
B
HOH
58
5
HOH
HOH
58
B
HOH
59
5
HOH
HOH
59
B
HOH
60
5
HOH
HOH
60
B
HOH
61
5
HOH
HOH
61
B
HOH
66
5
HOH
HOH
66
B
HOH
71
5
HOH
HOH
71
B
HOH
77
5
HOH
HOH
77
B
HOH
88
5
HOH
HOH
88
B
HOH
92
5
HOH
HOH
92
B
HOH
98
5
HOH
HOH
98
B
HOH
107
5
HOH
HOH
107
B
HOH
112
5
HOH
HOH
112
B
HOH
116
5
HOH
HOH
116
B
HOH
118
5
HOH
HOH
118
B
HOH
120
5
HOH
HOH
120
B
HOH
126
5
HOH
HOH
126
B
HOH
131
5
HOH
HOH
131
B
HOH
132
5
HOH
HOH
132
B
HOH
133
5
HOH
HOH
133
B
HOH
138
5
HOH
HOH
138
B
HOH
141
5
HOH
HOH
141
B
HOH
142
5
HOH
HOH
142
B
HOH
145
5
HOH
HOH
145
B
HOH
148
5
HOH
HOH
148
B
HOH
149
5
HOH
HOH
149
B
HOH
152
5
HOH
HOH
152
B
HOH
155
5
HOH
HOH
155
B
HOH
157
5
HOH
HOH
157
B
HOH
160
5
HOH
HOH
160
B
HOH
162
5
HOH
HOH
162
B
HOH
163
5
HOH
HOH
163
B
HOH
165
5
HOH
HOH
165
B
HOH
168
5
HOH
HOH
168
B
HOH
169
5
HOH
HOH
169
B
HOH
171
5
HOH
HOH
171
B
HOH
173
5
HOH
HOH
173
B
HOH
175
5
HOH
HOH
175
B
HOH
181
5
HOH
HOH
181
B
HOH
182
5
HOH
HOH
182
B
HOH
185
5
HOH
HOH
185
B
HOH
192
5
HOH
HOH
192
B
HOH
195
5
HOH
HOH
195
B
HOH
196
5
HOH
HOH
196
B
HOH
197
5
HOH
HOH
197
B
HOH
198
5
HOH
HOH
198
B
HOH
199
5
HOH
HOH
199
B
HOH
200
5
HOH
HOH
200
B
HOH
203
5
HOH
HOH
203
B
HOH
204
5
HOH
HOH
204
B
HOH
206
5
HOH
HOH
206
B
HOH
207
5
HOH
HOH
207
B
HOH
209
5
HOH
HOH
209
B
HOH
211
5
HOH
HOH
211
B
HOH
215
5
HOH
HOH
215
B
HOH
219
5
HOH
HOH
219
B
HOH
221
5
HOH
HOH
221
B
HOH
224
5
HOH
HOH
224
B
HOH
225
5
HOH
HOH
225
B
HOH
228
5
HOH
HOH
228
B
HOH
230
5
HOH
HOH
230
B
HOH
231
5
HOH
HOH
231
B
HOH
232
5
HOH
HOH
232
B
HOH
235
5
HOH
HOH
235
B
HOH
236
5
HOH
HOH
236
B
HOH
239
5
HOH
HOH
239
B
HOH
243
5
HOH
HOH
243
B
HOH
247
5
HOH
HOH
247
B
HOH
252
5
HOH
HOH
252
B
HOH
260
5
HOH
HOH
260
B
HOH
261
5
HOH
HOH
261
B
HOH
262
5
HOH
HOH
262
B
HOH
264
5
HOH
HOH
264
B
HOH
265
5
HOH
HOH
265
B
HOH
273
5
HOH
HOH
273
B
HOH
278
5
HOH
HOH
278
B
HOH
280
5
HOH
HOH
280
B
HOH
282
5
HOH
HOH
282
B
HOH
287
5
HOH
HOH
287
B
HOH
288
5
HOH
HOH
288
B
HOH
289
5
HOH
HOH
289
B
HOH
290
5
HOH
HOH
290
B
HOH
291
5
HOH
HOH
291
B
HOH
292
5
HOH
HOH
292
B
HOH
306
5
HOH
HOH
306
B
HOH
307
5
HOH
HOH
307
B
HOH
308
5
HOH
HOH
308
B
HOH
309
5
HOH
HOH
309
B
HOH
311
5
HOH
HOH
311
B
HOH
315
5
HOH
HOH
315
B
HOH
316
5
HOH
HOH
316
B
HOH
323
5
HOH
HOH
323
B
HOH
327
5
HOH
HOH
327
B
HOH
328
5
HOH
HOH
328
B
HOH
329
5
HOH
HOH
329
B
HOH
330
5
HOH
HOH
330
B
HOH
331
5
HOH
HOH
331
B
HOH
332
5
HOH
HOH
332
B
HOH
333
5
HOH
HOH
333
B
HOH
350
5
HOH
HOH
350
B
HOH
351
5
HOH
HOH
351
B
HOH
352
5
HOH
HOH
352
B
HOH
353
5
HOH
HOH
353
B
HOH
354
5
HOH
HOH
354
B
HOH
355
5
HOH
HOH
355
B
HOH
357
5
HOH
HOH
357
B
HOH
358
5
HOH
HOH
358
B
HOH
359
5
HOH
HOH
359
B
HOH
360
5
HOH
HOH
360
B
HOH
361
5
HOH
HOH
361
B
HOH
362
5
HOH
HOH
362
B
HOH
363
5
HOH
HOH
363
B
HOH
1
5
HOH
HOH
504
A
HOH
2
5
HOH
HOH
505
A
HOH
3
5
HOH
HOH
506
A
HOH
4
5
HOH
HOH
507
A
HOH
6
5
HOH
HOH
508
A
HOH
7
5
HOH
HOH
509
A
HOH
8
5
HOH
HOH
510
A
HOH
9
5
HOH
HOH
511
A
HOH
10
5
HOH
HOH
512
A
HOH
11
5
HOH
HOH
513
A
HOH
12
5
HOH
HOH
514
A
HOH
13
5
HOH
HOH
515
A
HOH
14
5
HOH
HOH
516
A
HOH
15
5
HOH
HOH
517
A
HOH
16
5
HOH
HOH
518
A
HOH
17
5
HOH
HOH
519
A
HOH
19
5
HOH
HOH
520
A
HOH
20
5
HOH
HOH
521
A
HOH
21
5
HOH
HOH
522
A
HOH
22
5
HOH
HOH
523
A
HOH
26
5
HOH
HOH
524
A
HOH
27
5
HOH
HOH
525
A
HOH
29
5
HOH
HOH
526
A
HOH
30
5
HOH
HOH
527
A
HOH
31
5
HOH
HOH
528
A
HOH
32
5
HOH
HOH
529
A
HOH
33
5
HOH
HOH
530
A
HOH
34
5
HOH
HOH
531
A
HOH
35
5
HOH
HOH
532
A
HOH
36
5
HOH
HOH
533
A
HOH
37
5
HOH
HOH
534
A
HOH
39
5
HOH
HOH
535
A
HOH
40
5
HOH
HOH
536
A
HOH
42
5
HOH
HOH
537
A
HOH
44
5
HOH
HOH
538
A
HOH
45
5
HOH
HOH
539
A
HOH
47
5
HOH
HOH
540
A
HOH
48
5
HOH
HOH
541
A
HOH
49
5
HOH
HOH
542
A
HOH
50
5
HOH
HOH
543
A
HOH
51
5
HOH
HOH
544
A
HOH
52
5
HOH
HOH
545
A
HOH
53
5
HOH
HOH
546
A
HOH
54
5
HOH
HOH
547
A
HOH
55
5
HOH
HOH
548
A
HOH
57
5
HOH
HOH
549
A
HOH
62
5
HOH
HOH
550
A
HOH
63
5
HOH
HOH
551
A
HOH
64
5
HOH
HOH
552
A
HOH
65
5
HOH
HOH
553
A
HOH
67
5
HOH
HOH
554
A
HOH
68
5
HOH
HOH
555
A
HOH
69
5
HOH
HOH
556
A
HOH
70
5
HOH
HOH
557
A
HOH
72
5
HOH
HOH
558
A
HOH
73
5
HOH
HOH
559
A
HOH
74
5
HOH
HOH
560
A
HOH
75
5
HOH
HOH
561
A
HOH
76
5
HOH
HOH
562
A
HOH
78
5
HOH
HOH
563
A
HOH
79
5
HOH
HOH
564
A
HOH
80
5
HOH
HOH
565
A
HOH
81
5
HOH
HOH
566
A
HOH
82
5
HOH
HOH
567
A
HOH
83
5
HOH
HOH
568
A
HOH
84
5
HOH
HOH
569
A
HOH
85
5
HOH
HOH
570
A
HOH
86
5
HOH
HOH
571
A
HOH
87
5
HOH
HOH
572
A
HOH
89
5
HOH
HOH
573
A
HOH
90
5
HOH
HOH
574
A
HOH
91
5
HOH
HOH
575
A
HOH
93
5
HOH
HOH
576
A
HOH
94
5
HOH
HOH
577
A
HOH
95
5
HOH
HOH
578
A
HOH
96
5
HOH
HOH
579
A
HOH
97
5
HOH
HOH
580
A
HOH
99
5
HOH
HOH
581
A
HOH
100
5
HOH
HOH
582
A
HOH
101
5
HOH
HOH
583
A
HOH
102
5
HOH
HOH
584
A
HOH
103
5
HOH
HOH
585
A
HOH
104
5
HOH
HOH
586
A
HOH
105
5
HOH
HOH
587
A
HOH
106
5
HOH
HOH
588
A
HOH
108
5
HOH
HOH
589
A
HOH
109
5
HOH
HOH
590
A
HOH
110
5
HOH
HOH
591
A
HOH
111
5
HOH
HOH
592
A
HOH
113
5
HOH
HOH
593
A
HOH
114
5
HOH
HOH
594
A
HOH
115
5
HOH
HOH
595
A
HOH
117
5
HOH
HOH
596
A
HOH
119
5
HOH
HOH
597
A
HOH
121
5
HOH
HOH
598
A
HOH
122
5
HOH
HOH
599
A
HOH
123
5
HOH
HOH
600
A
HOH
124
5
HOH
HOH
601
A
HOH
125
5
HOH
HOH
602
A
HOH
127
5
HOH
HOH
603
A
HOH
128
5
HOH
HOH
604
A
HOH
129
5
HOH
HOH
605
A
HOH
130
5
HOH
HOH
606
A
HOH
134
5
HOH
HOH
607
A
HOH
135
5
HOH
HOH
608
A
HOH
136
5
HOH
HOH
609
A
HOH
137
5
HOH
HOH
610
A
HOH
139
5
HOH
HOH
611
A
HOH
140
5
HOH
HOH
612
A
HOH
143
5
HOH
HOH
613
A
HOH
144
5
HOH
HOH
614
A
HOH
146
5
HOH
HOH
615
A
HOH
147
5
HOH
HOH
616
A
HOH
150
5
HOH
HOH
617
A
HOH
151
5
HOH
HOH
618
A
HOH
153
5
HOH
HOH
619
A
HOH
154
5
HOH
HOH
620
A
HOH
156
5
HOH
HOH
621
A
HOH
158
5
HOH
HOH
622
A
HOH
159
5
HOH
HOH
623
A
HOH
161
5
HOH
HOH
624
A
HOH
164
5
HOH
HOH
625
A
HOH
166
5
HOH
HOH
626
A
HOH
167
5
HOH
HOH
627
A
HOH
170
5
HOH
HOH
628
A
HOH
172
5
HOH
HOH
629
A
HOH
174
5
HOH
HOH
630
A
HOH
176
5
HOH
HOH
631
A
HOH
177
5
HOH
HOH
632
A
HOH
178
5
HOH
HOH
633
A
HOH
179
5
HOH
HOH
634
A
HOH
180
5
HOH
HOH
635
A
HOH
183
5
HOH
HOH
636
A
HOH
184
5
HOH
HOH
637
A
HOH
186
5
HOH
HOH
638
A
HOH
187
5
HOH
HOH
639
A
HOH
188
5
HOH
HOH
640
A
HOH
189
5
HOH
HOH
641
A
HOH
190
5
HOH
HOH
642
A
HOH
191
5
HOH
HOH
643
A
HOH
193
5
HOH
HOH
644
A
HOH
194
5
HOH
HOH
645
A
HOH
201
5
HOH
HOH
646
A
HOH
202
5
HOH
HOH
647
A
HOH
205
5
HOH
HOH
648
A
HOH
208
5
HOH
HOH
649
A
HOH
210
5
HOH
HOH
650
A
HOH
212
5
HOH
HOH
651
A
HOH
213
5
HOH
HOH
652
A
HOH
214
5
HOH
HOH
653
A
HOH
216
5
HOH
HOH
654
A
HOH
217
5
HOH
HOH
655
A
HOH
218
5
HOH
HOH
656
A
HOH
220
5
HOH
HOH
657
A
HOH
222
5
HOH
HOH
658
A
HOH
223
5
HOH
HOH
659
A
HOH
226
5
HOH
HOH
660
A
HOH
227
5
HOH
HOH
661
A
HOH
229
5
HOH
HOH
662
A
HOH
233
5
HOH
HOH
663
A
HOH
234
5
HOH
HOH
664
A
HOH
237
5
HOH
HOH
665
A
HOH
238
5
HOH
HOH
666
A
HOH
240
5
HOH
HOH
667
A
HOH
241
5
HOH
HOH
668
A
HOH
242
5
HOH
HOH
669
A
HOH
244
5
HOH
HOH
670
A
HOH
245
5
HOH
HOH
671
A
HOH
246
5
HOH
HOH
672
A
HOH
248
5
HOH
HOH
673
A
HOH
249
5
HOH
HOH
674
A
HOH
250
5
HOH
HOH
675
A
HOH
251
5
HOH
HOH
676
A
HOH
253
5
HOH
HOH
677
A
HOH
254
5
HOH
HOH
678
A
HOH
255
5
HOH
HOH
679
A
HOH
256
5
HOH
HOH
680
A
HOH
257
5
HOH
HOH
681
A
HOH
258
5
HOH
HOH
682
A
HOH
259
5
HOH
HOH
683
A
HOH
263
5
HOH
HOH
684
A
HOH
266
5
HOH
HOH
685
A
HOH
267
5
HOH
HOH
686
A
HOH
268
5
HOH
HOH
687
A
HOH
269
5
HOH
HOH
688
A
HOH
270
5
HOH
HOH
689
A
HOH
271
5
HOH
HOH
690
A
HOH
272
5
HOH
HOH
691
A
HOH
274
5
HOH
HOH
692
A
HOH
275
5
HOH
HOH
693
A
HOH
276
5
HOH
HOH
694
A
HOH
277
5
HOH
HOH
695
A
HOH
279
5
HOH
HOH
696
A
HOH
281
5
HOH
HOH
697
A
HOH
283
5
HOH
HOH
698
A
HOH
284
5
HOH
HOH
699
A
HOH
285
5
HOH
HOH
700
A
HOH
286
5
HOH
HOH
701
A
HOH
293
5
HOH
HOH
702
A
HOH
294
5
HOH
HOH
703
A
HOH
295
5
HOH
HOH
704
A
HOH
296
5
HOH
HOH
705
A
HOH
297
5
HOH
HOH
706
A
HOH
298
5
HOH
HOH
707
A
HOH
299
5
HOH
HOH
708
A
HOH
300
5
HOH
HOH
709
A
HOH
301
5
HOH
HOH
710
A
HOH
302
5
HOH
HOH
711
A
HOH
303
5
HOH
HOH
712
A
HOH
304
5
HOH
HOH
713
A
HOH
305
5
HOH
HOH
714
A
HOH
310
5
HOH
HOH
715
A
HOH
312
5
HOH
HOH
716
A
HOH
313
5
HOH
HOH
717
A
HOH
314
5
HOH
HOH
718
A
HOH
317
5
HOH
HOH
719
A
HOH
318
5
HOH
HOH
720
A
HOH
319
5
HOH
HOH
721
A
HOH
320
5
HOH
HOH
722
A
HOH
321
5
HOH
HOH
723
A
HOH
322
5
HOH
HOH
724
A
HOH
324
5
HOH
HOH
725
A
HOH
325
5
HOH
HOH
726
A
HOH
326
5
HOH
HOH
727
A
HOH
334
5
HOH
HOH
728
A
HOH
335
5
HOH
HOH
729
A
HOH
336
5
HOH
HOH
730
A
HOH
337
5
HOH
HOH
731
A
HOH
338
5
HOH
HOH
732
A
HOH
339
5
HOH
HOH
733
A
HOH
340
5
HOH
HOH
734
A
HOH
341
5
HOH
HOH
735
A
HOH
342
5
HOH
HOH
736
A
HOH
343
5
HOH
HOH
737
A
HOH
344
5
HOH
HOH
738
A
HOH
345
5
HOH
HOH
739
A
HOH
346
5
HOH
HOH
740
A
HOH
347
5
HOH
HOH
741
A
HOH
348
5
HOH
HOH
742
A
HOH
349
5
HOH
HOH
743
A
HOH
356
5
HOH
HOH
744
A
HOH
364
5
HOH
HOH
745
A
C
501
n
1
C
501
B
C
502
n
2
C
502
B
G
503
n
3
G
503
B
G
504
n
4
G
504
B
C
505
n
5
C
505
B
G
506
n
6
G
506
B
G
507
n
7
G
507
B
U
508
n
8
U
508
B
A
509
n
9
A
509
B
G
510
n
10
G
510
B
U
511
n
11
U
511
B
U
512
n
12
U
512
B
C
513
n
13
C
513
B
A
514
n
14
A
514
B
G
515
n
15
G
515
B
C
516
n
16
C
516
B
C
517
n
17
C
517
B
U
518
n
18
U
518
B
G
519
n
19
G
519
B
G
520
n
20
G
520
B
U
521
n
21
U
521
B
A
522
n
22
A
522
B
G
523
n
23
G
523
B
A
524
n
24
A
524
B
A
525
n
25
A
525
B
C
526
n
26
C
526
B
G
527
n
27
G
527
B
G
528
n
28
G
528
B
C
529
n
29
C
529
B
G
530
n
30
G
530
B
G
531
n
31
G
531
B
A
532
n
32
A
532
B
C
533
n
33
C
533
B
U
534
n
34
U
534
B
G
535
n
35
G
535
B
U
536
n
36
U
536
B
A
537
n
37
A
537
B
G
538
n
38
G
538
B
A
539
n
39
A
539
B
U
540
n
40
U
540
B
C
541
n
41
C
541
B
C
542
n
42
C
542
B
G
543
n
43
G
543
B
C
544
n
44
C
544
B
A
545
n
45
A
545
B
U
546
n
46
U
546
B
G
547
n
47
G
547
B
U
548
n
48
U
548
B
C
549
n
49
C
549
B
G
550
n
50
G
550
B
C
551
n
51
C
551
B
U
552
n
52
U
552
B
G
553
n
53
G
553
B
G
554
n
54
G
554
B
U
555
n
55
U
555
B
U
556
n
56
U
556
B
C
557
n
57
C
557
B
A
558
n
58
A
558
B
A
559
n
59
A
559
B
A
560
n
60
A
560
B
U
561
n
61
U
561
B
C
562
n
62
C
562
B
C
563
n
63
C
563
B
G
564
n
64
G
564
B
G
565
n
65
G
565
B
C
566
n
66
C
566
B
C
567
n
67
C
567
B
C
568
n
68
C
568
B
G
569
n
69
G
569
B
C
570
n
70
C
570
B
C
571
n
71
C
571
B
G
572
n
72
G
572
B
G
573
n
73
G
573
B
A
574
n
74
A
574
B
n
75
575
B
n
76
576
B
n
77
577
B
MET
1
n
1
MET
1
A
ASP
2
n
2
ASP
2
A
GLU
3
n
3
GLU
3
A
PHE
4
n
4
PHE
4
A
GLU
5
n
5
GLU
5
A
MET
6
n
6
MET
6
A
ILE
7
n
7
ILE
7
A
LYS
8
n
8
LYS
8
A
ARG
9
n
9
ARG
9
A
ASN
10
n
10
ASN
10
A
THR
11
n
11
THR
11
A
SER
12
n
12
SER
12
A
GLU
13
n
13
GLU
13
A
ILE
14
n
14
ILE
14
A
ILE
15
n
15
ILE
15
A
SER
16
n
16
SER
16
A
GLU
17
n
17
GLU
17
A
GLU
18
n
18
GLU
18
A
GLU
19
n
19
GLU
19
A
LEU
20
n
20
LEU
20
A
ARG
21
n
21
ARG
21
A
GLU
22
n
22
GLU
22
A
VAL
23
n
23
VAL
23
A
LEU
24
n
24
LEU
24
A
LYS
25
n
25
LYS
25
A
LYS
26
n
26
LYS
26
A
ASP
27
n
27
ASP
27
A
GLU
28
n
28
GLU
28
A
LYS
29
n
29
LYS
29
A
SER
30
n
30
SER
30
A
ALA
31
n
31
ALA
31
A
TYR
32
n
32
TYR
32
A
ILE
33
n
33
ILE
33
A
GLY
34
n
34
GLY
34
A
PHE
35
n
35
PHE
35
A
GLU
36
n
36
GLU
36
A
PRO
37
n
37
PRO
37
A
SER
38
n
38
SER
38
A
GLY
39
n
39
GLY
39
A
LYS
40
n
40
LYS
40
A
ILE
41
n
41
ILE
41
A
HIS
42
n
42
HIS
42
A
LEU
43
n
43
LEU
43
A
GLY
44
n
44
GLY
44
A
HIS
45
n
45
HIS
45
A
TYR
46
n
46
TYR
46
A
LEU
47
n
47
LEU
47
A
GLN
48
n
48
GLN
48
A
ILE
49
n
49
ILE
49
A
LYS
50
n
50
LYS
50
A
LYS
51
n
51
LYS
51
A
MET
52
n
52
MET
52
A
ILE
53
n
53
ILE
53
A
ASP
54
n
54
ASP
54
A
LEU
55
n
55
LEU
55
A
GLN
56
n
56
GLN
56
A
ASN
57
n
57
ASN
57
A
ALA
58
n
58
ALA
58
A
GLY
59
n
59
GLY
59
A
PHE
60
n
60
PHE
60
A
ASP
61
n
61
ASP
61
A
ILE
62
n
62
ILE
62
A
ILE
63
n
63
ILE
63
A
ILE
64
n
64
ILE
64
A
LEU
65
n
65
LEU
65
A
LEU
66
n
66
LEU
66
A
ALA
67
n
67
ALA
67
A
ASP
68
n
68
ASP
68
A
LEU
69
n
69
LEU
69
A
HIS
70
n
70
HIS
70
A
ALA
71
n
71
ALA
71
A
TYR
72
n
72
TYR
72
A
LEU
73
n
73
LEU
73
A
ASN
74
n
74
ASN
74
A
GLN
75
n
75
GLN
75
A
LYS
76
n
76
LYS
76
A
GLY
77
n
77
GLY
77
A
GLU
78
n
78
GLU
78
A
LEU
79
n
79
LEU
79
A
ASP
80
n
80
ASP
80
A
GLU
81
n
81
GLU
81
A
ILE
82
n
82
ILE
82
A
ARG
83
n
83
ARG
83
A
LYS
84
n
84
LYS
84
A
ILE
85
n
85
ILE
85
A
GLY
86
n
86
GLY
86
A
ASP
87
n
87
ASP
87
A
TYR
88
n
88
TYR
88
A
ASN
89
n
89
ASN
89
A
LYS
90
n
90
LYS
90
A
LYS
91
n
91
LYS
91
A
VAL
92
n
92
VAL
92
A
PHE
93
n
93
PHE
93
A
GLU
94
n
94
GLU
94
A
ALA
95
n
95
ALA
95
A
MET
96
n
96
MET
96
A
GLY
97
n
97
GLY
97
A
LEU
98
n
98
LEU
98
A
LYS
99
n
99
LYS
99
A
ALA
100
n
100
ALA
100
A
LYS
101
n
101
LYS
101
A
TYR
102
n
102
TYR
102
A
VAL
103
n
103
VAL
103
A
TYR
104
n
104
TYR
104
A
GLY
105
n
105
GLY
105
A
SER
106
n
106
SER
106
A
GLU
107
n
107
GLU
107
A
PHE
108
n
108
PHE
108
A
GLN
109
n
109
GLN
109
A
LEU
110
n
110
LEU
110
A
ASP
111
n
111
ASP
111
A
LYS
112
n
112
LYS
112
A
ASP
113
n
113
ASP
113
A
TYR
114
n
114
TYR
114
A
THR
115
n
115
THR
115
A
LEU
116
n
116
LEU
116
A
ASN
117
n
117
ASN
117
A
VAL
118
n
118
VAL
118
A
TYR
119
n
119
TYR
119
A
ARG
120
n
120
ARG
120
A
LEU
121
n
121
LEU
121
A
ALA
122
n
122
ALA
122
A
LEU
123
n
123
LEU
123
A
LYS
124
n
124
LYS
124
A
THR
125
n
125
THR
125
A
THR
126
n
126
THR
126
A
LEU
127
n
127
LEU
127
A
LYS
128
n
128
LYS
128
A
ARG
129
n
129
ARG
129
A
ALA
130
n
130
ALA
130
A
ARG
131
n
131
ARG
131
A
ARG
132
n
132
ARG
132
A
SER
133
n
133
SER
133
A
MET
134
n
134
MET
134
A
GLU
135
n
135
GLU
135
A
LEU
136
n
136
LEU
136
A
ILE
137
n
137
ILE
137
A
ALA
138
n
138
ALA
138
A
ARG
139
n
139
ARG
139
A
GLU
140
n
140
GLU
140
A
ASP
141
n
141
ASP
141
A
GLU
142
n
142
GLU
142
A
ASN
143
n
143
ASN
143
A
PRO
144
n
144
PRO
144
A
LYS
145
n
145
LYS
145
A
VAL
146
n
146
VAL
146
A
ALA
147
n
147
ALA
147
A
GLU
148
n
148
GLU
148
A
VAL
149
n
149
VAL
149
A
ILE
150
n
150
ILE
150
A
TYR
151
n
151
TYR
151
A
PRO
152
n
152
PRO
152
A
ILE
153
n
153
ILE
153
A
MET
154
n
154
MET
154
A
GLN
155
n
155
GLN
155
A
VAL
156
n
156
VAL
156
A
ASN
157
n
157
ASN
157
A
ASP
158
n
158
ASP
158
A
ILE
159
n
159
ILE
159
A
HIS
160
n
160
HIS
160
A
TYR
161
n
161
TYR
161
A
LEU
162
n
162
LEU
162
A
GLY
163
n
163
GLY
163
A
VAL
164
n
164
VAL
164
A
ASP
165
n
165
ASP
165
A
VAL
166
n
166
VAL
166
A
ALA
167
n
167
ALA
167
A
VAL
168
n
168
VAL
168
A
GLY
169
n
169
GLY
169
A
GLY
170
n
170
GLY
170
A
MET
171
n
171
MET
171
A
GLU
172
n
172
GLU
172
A
GLN
173
n
173
GLN
173
A
ARG
174
n
174
ARG
174
A
LYS
175
n
175
LYS
175
A
ILE
176
n
176
ILE
176
A
HIS
177
n
177
HIS
177
A
MET
178
n
178
MET
178
A
LEU
179
n
179
LEU
179
A
ALA
180
n
180
ALA
180
A
ARG
181
n
181
ARG
181
A
GLU
182
n
182
GLU
182
A
LEU
183
n
183
LEU
183
A
LEU
184
n
184
LEU
184
A
PRO
185
n
185
PRO
185
A
LYS
186
n
186
LYS
186
A
LYS
187
n
187
LYS
187
A
VAL
188
n
188
VAL
188
A
VAL
189
n
189
VAL
189
A
CYS
190
n
190
CYS
190
A
ILE
191
n
191
ILE
191
A
HIS
192
n
192
HIS
192
A
ASN
193
n
193
ASN
193
A
PRO
194
n
194
PRO
194
A
VAL
195
n
195
VAL
195
A
LEU
196
n
196
LEU
196
A
THR
197
n
197
THR
197
A
GLY
198
n
198
GLY
198
A
LEU
199
n
199
LEU
199
A
ASP
200
n
200
ASP
200
A
GLY
201
n
201
GLY
201
A
GLU
202
n
202
GLU
202
A
n
203
203
A
n
204
204
A
n
205
205
A
n
206
206
A
n
207
207
A
n
208
208
A
n
209
209
A
GLY
210
n
210
GLY
210
A
ASN
211
n
211
ASN
211
A
PHE
212
n
212
PHE
212
A
ILE
213
n
213
ILE
213
A
ALA
214
n
214
ALA
214
A
VAL
215
n
215
VAL
215
A
ASP
216
n
216
ASP
216
A
ASP
217
n
217
ASP
217
A
SER
218
n
218
SER
218
A
PRO
219
n
219
PRO
219
A
GLU
220
n
220
GLU
220
A
GLU
221
n
221
GLU
221
A
ILE
222
n
222
ILE
222
A
ARG
223
n
223
ARG
223
A
ALA
224
n
224
ALA
224
A
LYS
225
n
225
LYS
225
A
ILE
226
n
226
ILE
226
A
LYS
227
n
227
LYS
227
A
LYS
228
n
228
LYS
228
A
ALA
229
n
229
ALA
229
A
TYR
230
n
230
TYR
230
A
CYS
231
n
231
CYS
231
A
PRO
232
n
232
PRO
232
A
ALA
233
n
233
ALA
233
A
GLY
234
n
234
GLY
234
A
VAL
235
n
235
VAL
235
A
VAL
236
n
236
VAL
236
A
GLU
237
n
237
GLU
237
A
GLY
238
n
238
GLY
238
A
ASN
239
n
239
ASN
239
A
PRO
240
n
240
PRO
240
A
ILE
241
n
241
ILE
241
A
MET
242
n
242
MET
242
A
GLU
243
n
243
GLU
243
A
ILE
244
n
244
ILE
244
A
ALA
245
n
245
ALA
245
A
LYS
246
n
246
LYS
246
A
TYR
247
n
247
TYR
247
A
PHE
248
n
248
PHE
248
A
LEU
249
n
249
LEU
249
A
GLU
250
n
250
GLU
250
A
TYR
251
n
251
TYR
251
A
PRO
252
n
252
PRO
252
A
LEU
253
n
253
LEU
253
A
THR
254
n
254
THR
254
A
ILE
255
n
255
ILE
255
A
LYS
256
n
256
LYS
256
A
ARG
257
n
257
ARG
257
A
PRO
258
n
258
PRO
258
A
GLU
259
n
259
GLU
259
A
LYS
260
n
260
LYS
260
A
PHE
261
n
261
PHE
261
A
GLY
262
n
262
GLY
262
A
GLY
263
n
263
GLY
263
A
ASP
264
n
264
ASP
264
A
LEU
265
n
265
LEU
265
A
THR
266
n
266
THR
266
A
VAL
267
n
267
VAL
267
A
ASN
268
n
268
ASN
268
A
SER
269
n
269
SER
269
A
TYR
270
n
270
TYR
270
A
GLU
271
n
271
GLU
271
A
GLU
272
n
272
GLU
272
A
LEU
273
n
273
LEU
273
A
GLU
274
n
274
GLU
274
A
SER
275
n
275
SER
275
A
LEU
276
n
276
LEU
276
A
PHE
277
n
277
PHE
277
A
LYS
278
n
278
LYS
278
A
ASN
279
n
279
ASN
279
A
LYS
280
n
280
LYS
280
A
GLU
281
n
281
GLU
281
A
LEU
282
n
282
LEU
282
A
HIS
283
n
283
HIS
283
A
PRO
284
n
284
PRO
284
A
MET
285
n
285
MET
285
A
ASP
286
n
286
ASP
286
A
LEU
287
n
287
LEU
287
A
LYS
288
n
288
LYS
288
A
ASN
289
n
289
ASN
289
A
ALA
290
n
290
ALA
290
A
VAL
291
n
291
VAL
291
A
ALA
292
n
292
ALA
292
A
GLU
293
n
293
GLU
293
A
GLU
294
n
294
GLU
294
A
LEU
295
n
295
LEU
295
A
ILE
296
n
296
ILE
296
A
LYS
297
n
297
LYS
297
A
ILE
298
n
298
ILE
298
A
LEU
299
n
299
LEU
299
A
GLU
300
n
300
GLU
300
A
PRO
301
n
301
PRO
301
A
ILE
302
n
302
ILE
302
A
ARG
303
n
303
ARG
303
A
LYS
304
n
304
LYS
304
A
ARG
305
n
305
ARG
305
A
LEU
306
n
306
LEU
306
A
author_defined_assembly
4
tetrameric
B
HOH
18
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
77
H
O
HOH
1_555
167.8
B
HOH
18
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
278
H
O
HOH
1_555
90.2
B
HOH
77
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
278
H
O
HOH
1_555
86.3
B
HOH
18
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
359
H
O
HOH
1_555
88.4
B
HOH
77
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
359
H
O
HOH
1_555
103.9
B
HOH
278
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
359
H
O
HOH
1_555
106.5
B
HOH
18
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
360
H
O
HOH
1_555
83.5
B
HOH
77
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
360
H
O
HOH
1_555
84.6
B
HOH
278
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
360
H
O
HOH
1_555
87.6
B
HOH
359
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
360
H
O
HOH
1_555
163.8
B
HOH
18
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
361
H
O
HOH
1_555
78.4
B
HOH
77
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
361
H
O
HOH
1_555
103.7
B
HOH
278
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
361
H
O
HOH
1_555
167.5
B
HOH
359
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
361
H
O
HOH
1_555
78.6
B
HOH
360
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
B
HOH
361
H
O
HOH
1_555
86.0
B
HOH
60
H
O
HOH
1_555
B
MG
1501
C
MG
MG
1_555
B
HOH
350
H
O
HOH
1_555
94.2
B
HOH
60
H
O
HOH
1_555
B
MG
1501
C
MG
MG
1_555
B
A
509
A
OP1
A
9
1_555
81.5
B
HOH
350
H
O
HOH
1_555
B
MG
1501
C
MG
MG
1_555
B
A
509
A
OP1
A
9
1_555
105.1
B
HOH
60
H
O
HOH
1_555
B
MG
1501
C
MG
MG
1_555
B
G
510
A
OP2
G
10
1_555
72.2
B
HOH
350
H
O
HOH
1_555
B
MG
1501
C
MG
MG
1_555
B
G
510
A
OP2
G
10
1_555
153.8
B
A
509
A
OP1
A
9
1_555
B
MG
1501
C
MG
MG
1_555
B
G
510
A
OP2
G
10
1_555
95.1
B
HOH
60
H
O
HOH
1_555
B
MG
1501
C
MG
MG
1_555
B
U
548
A
OP1
U
48
1_555
159.9
B
HOH
350
H
O
HOH
1_555
B
MG
1501
C
MG
MG
1_555
B
U
548
A
OP1
U
48
1_555
89.7
B
A
509
A
OP1
A
9
1_555
B
MG
1501
C
MG
MG
1_555
B
U
548
A
OP1
U
48
1_555
116.5
B
G
510
A
OP2
G
10
1_555
B
MG
1501
C
MG
MG
1_555
B
U
548
A
OP1
U
48
1_555
96.0
B
HOH
61
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
288
H
O
HOH
1_555
86.9
B
HOH
61
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
289
H
O
HOH
1_555
82.7
B
HOH
288
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
289
H
O
HOH
1_555
169.3
B
HOH
61
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
290
H
O
HOH
1_555
89.7
B
HOH
288
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
290
H
O
HOH
1_555
83.4
B
HOH
289
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
290
H
O
HOH
1_555
94.7
B
HOH
61
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
291
H
O
HOH
1_555
92.3
B
HOH
288
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
291
H
O
HOH
1_555
87.7
B
HOH
289
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
291
H
O
HOH
1_555
94.5
B
HOH
290
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
291
H
O
HOH
1_555
170.8
B
HOH
61
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
292
H
O
HOH
1_555
166.4
B
HOH
288
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
292
H
O
HOH
1_555
85.0
B
HOH
289
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
292
H
O
HOH
1_555
104.9
B
HOH
290
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
292
H
O
HOH
1_555
78.5
B
HOH
291
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
B
HOH
292
H
O
HOH
1_555
98.3
A
HIS
160
B
NE2
HIS
160
1_555
A
MG
503
F
MG
MG
1_555
A
HOH
722
I
O
HOH
1_555
112.0
A
HIS
160
B
NE2
HIS
160
1_555
A
MG
503
F
MG
MG
1_555
A
HOH
723
I
O
HOH
1_555
108.4
A
HOH
722
I
O
HOH
1_555
A
MG
503
F
MG
MG
1_555
A
HOH
723
I
O
HOH
1_555
123.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_556
y,x,-z+1
crystal symmetry operation
0.0000000000
0.0000000000
156.0750000000
A
N
ILE
15
B
N
ILE
15
A
O
CYS
190
B
O
CYS
190
A
O
VAL
189
B
O
VAL
189
A
N
ALA
167
B
N
ALA
167
A
O
VAL
168
B
O
VAL
168
A
N
TYR
32
B
N
TYR
32
A
N
ILE
33
B
N
ILE
33
A
O
LEU
65
B
O
LEU
65
A
N
LEU
66
B
N
LEU
66
A
O
VAL
103
B
O
VAL
103
A
N
ILE
255
B
N
ILE
255
A
O
LEU
265
B
O
LEU
265
1
A
HOH
730
I
HOH
1
A
HOH
745
I
HOH
1
B
C
575
A
C
75
1
Y
1
B
C
576
A
C
76
1
Y
1
B
A
577
A
A
77
1
Y
1
A
GLY
203
B
GLY
203
1
Y
1
A
LYS
204
B
LYS
204
1
Y
1
A
MET
205
B
MET
205
1
Y
1
A
SER
206
B
SER
206
1
Y
1
A
SER
207
B
SER
207
1
Y
1
A
SER
208
B
SER
208
1
Y
1
A
LYS
209
B
LYS
209
1
Y
1
A
A
NH1
O
ARG
HOH
129
716
1.87
1
A
A
O
O
HOH
HOH
504
706
1.91
1
A
A
O
O
HOH
HOH
704
738
1.91
1
A
A
O
O
HOH
HOH
528
732
1.97
1
A
A
O
O
HOH
HOH
724
728
1.99
1
A
A
O
O
HOH
HOH
724
729
2.00
1
A
A
O
O
HOH
HOH
507
706
2.00
1
A
A
O
O
HOH
HOH
519
713
2.00
1
A
A
O
O
HOH
HOH
542
721
2.06
1
B
B
O3'
O
A
HOH
574
282
2.13
1
A
A
O
O
HOH
HOH
553
704
2.17
1
A
A
O
O
HOH
HOH
740
742
2.18
1
B
B
OP1
O
G
HOH
564
38
2.19
1
B
C
501
0.072
SIDE CHAIN
1
B
G
504
0.062
SIDE CHAIN
1
B
U
518
0.097
SIDE CHAIN
1
B
G
520
0.071
SIDE CHAIN
1
B
U
534
0.212
SIDE CHAIN
1
B
A
539
0.054
SIDE CHAIN
1
B
C
542
0.066
SIDE CHAIN
1
B
U
546
0.119
SIDE CHAIN
1
A
ARG
129
0.117
SIDE CHAIN
1
-12.73
2.10
109.40
96.67
B
B
B
C4'
C3'
O3'
G
G
G
519
519
519
N
1
9.81
1.30
114.00
123.81
B
B
B
N1
C1'
C2'
U
U
U
534
534
534
N
1
8.41
1.30
114.00
122.41
B
B
B
N9
C1'
C2'
G
G
G
547
547
547
N
1
6.93
1.10
110.50
117.43
B
B
B
O3'
P
OP1
G
U
U
547
548
548
Y
1
7.67
1.10
110.50
118.17
B
B
B
O3'
P
OP1
C
G
G
549
550
550
Y
1
-11.77
1.40
115.20
103.43
B
B
B
C5'
C4'
C3'
G
G
G
553
553
553
N
1
9.17
1.10
110.50
119.67
B
B
B
O3'
P
OP2
C
G
G
571
572
572
Y
1
3.07
0.50
120.30
123.37
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
181
181
181
N
1
-14.74
1.90
111.40
96.66
A
A
A
CB
CA
C
VAL
VAL
VAL
188
188
188
N
1
9.76
1.60
110.90
120.66
A
A
A
CG1
CB
CG2
VAL
VAL
VAL
188
188
188
N
1
-3.81
0.50
120.30
116.49
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
257
257
257
N
1
B
B
O5'
C5'
G
G
553
553
-0.087
0.009
1.420
1.333
N
1
B
B
N1
C2
C
C
562
562
-0.072
0.010
1.397
1.325
N
1
A
A
CE2
CD2
TYR
TYR
72
72
0.111
0.015
1.389
1.500
N
1
A
A
CG
CD
GLU
GLU
135
135
0.121
0.015
1.515
1.636
N
1
A
A
CD
CE
LYS
LYS
145
145
0.155
0.025
1.508
1.663
N
1
A
A
CB
CG2
VAL
VAL
166
166
0.149
0.021
1.524
1.673
N
1
A
A
CG
CD
GLU
GLU
237
237
0.094
0.015
1.515
1.609
N
1
A
A
CG
CD
GLU
GLU
293
293
0.097
0.015
1.515
1.612
N
1
A
ASP
2
94.53
112.88
1
A
HIS
42
-115.72
-168.81
1
A
ASN
211
-65.21
13.08
1
A
CYS
231
-163.50
79.61
PROTEIN_REP.PARAM
PROTEIN.TOP
DNA-RNA_REP.PARAM
DNA-RNA.TOP
WATER_REP.PARAM
WATER.TOP
ION.PARAM
ION.TOP
CIS_PEPTIDE.PARAM
43.6
3.86
3.02
0.00
3.86
0.00
-7.72
The bond distance between SD and CE in MET A 134 is slightly long.
0.239
0.003
0.188
0.188
1.95
34.63
4982
50210
49545
10.1
98.6
RANDOM
1657649.24
0.000000
1
RESTRAINED
THROUGHOUT
0
0
SAD
Engh & Huber
FLAT MODEL
62.7078
0.356068
0.27
0.20
5.00
0.25
0.22
1.95
34.63
364
4373
17
1578
2414
0.026
2.2
21.4
1.95
4.48
1.50
5.07
2.00
6.27
2.00
8.22
2.50
0.299
0.011
0.258
2.07
807
7049
6
10.3
94.7
23.1
1.95
50
1J1U
50210
49557
0
0
0.071
0.071
1,2
30.9
8.5
98.7
0.282
1.95
1.98
2.2
2302
0.282
2.9
93.1
refinement
CNS
1.0
data reduction
DENZO
data scaling
SCALEPACK
phasing
MLPHARE
Crystal structure of archaeal tyrosyl-tRNA synthetase complexed with tRNA(Tyr) and L-tyrosine
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
The second part of the biological assembly is generated
by the two fold axis: y,x,-z+1
A
ASP
2
B
ASP
2
HELX_P
A
ARG
9
B
ARG
9
1
1
8
A
SER
16
B
SER
16
HELX_P
A
LYS
25
B
LYS
25
1
2
10
A
HIS
42
B
HIS
42
HELX_P
A
ALA
58
B
ALA
58
1
3
17
A
ALA
67
B
ALA
67
HELX_P
A
ASN
74
B
ASN
74
1
4
8
A
GLU
78
B
GLU
78
HELX_P
A
MET
96
B
MET
96
1
5
19
A
SER
106
B
SER
106
HELX_P
A
PHE
108
B
PHE
108
5
6
3
A
ASP
111
B
ASP
111
HELX_P
A
THR
125
B
THR
125
1
7
15
A
THR
126
B
THR
126
HELX_P
A
MET
134
B
MET
134
1
8
9
A
VAL
146
B
VAL
146
HELX_P
A
GLY
163
B
GLY
163
1
9
18
A
GLN
173
B
GLN
173
HELX_P
A
LEU
184
B
LEU
184
1
10
12
A
SER
218
B
SER
218
HELX_P
A
ALA
229
B
ALA
229
1
11
12
A
ASN
239
B
ASN
239
HELX_P
A
PHE
248
B
PHE
248
1
12
10
A
PRO
258
B
PRO
258
HELX_P
A
GLY
262
B
GLY
262
5
13
5
A
SER
269
B
SER
269
HELX_P
A
ASN
279
B
ASN
279
1
14
11
A
HIS
283
B
HIS
283
HELX_P
A
ARG
305
B
ARG
305
1
15
23
metalc
2.236
B
HOH
18
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
metalc
2.398
B
HOH
60
H
O
HOH
1_555
B
MG
1501
C
MG
MG
1_555
metalc
2.047
B
HOH
61
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
metalc
2.309
B
HOH
77
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
metalc
2.047
B
HOH
278
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
metalc
2.111
B
HOH
288
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
metalc
2.151
B
HOH
289
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
metalc
2.348
B
HOH
290
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
metalc
2.208
B
HOH
291
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
metalc
2.149
B
HOH
292
H
O
HOH
1_555
B
MG
1502
D
MG
MG
1_555
metalc
2.192
B
HOH
350
H
O
HOH
1_555
B
MG
1501
C
MG
MG
1_555
metalc
2.203
B
HOH
359
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
metalc
2.403
B
HOH
360
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
metalc
2.593
B
HOH
361
H
O
HOH
1_555
B
MG
1503
E
MG
MG
1_555
metalc
2.083
B
A
509
A
OP1
A
9
1_555
B
MG
1501
C
MG
MG
1_555
metalc
2.240
B
G
510
A
OP2
G
10
1_555
B
MG
1501
C
MG
MG
1_555
metalc
2.411
B
U
548
A
OP1
U
48
1_555
B
MG
1501
C
MG
MG
1_555
metalc
2.166
A
HIS
160
B
NE2
HIS
160
1_555
A
MG
503
F
MG
MG
1_555
metalc
2.341
A
MG
503
F
MG
MG
1_555
A
HOH
722
I
O
HOH
1_555
metalc
2.091
A
MG
503
F
MG
MG
1_555
A
HOH
723
I
O
HOH
1_555
hydrog
WATSON-CRICK
B
C
501
A
N3
C
1
1_555
B
G
573
A
N1
G
73
1_555
hydrog
WATSON-CRICK
B
C
501
A
N4
C
1
1_555
B
G
573
A
O6
G
73
1_555
hydrog
WATSON-CRICK
B
C
501
A
O2
C
1
1_555
B
G
573
A
N2
G
73
1_555
hydrog
WATSON-CRICK
B
C
502
A
N3
C
2
1_555
B
G
572
A
N1
G
72
1_555
hydrog
WATSON-CRICK
B
C
502
A
N4
C
2
1_555
B
G
572
A
O6
G
72
1_555
hydrog
WATSON-CRICK
B
C
502
A
O2
C
2
1_555
B
G
572
A
N2
G
72
1_555
hydrog
WATSON-CRICK
B
G
503
A
N1
G
3
1_555
B
C
571
A
N3
C
71
1_555
hydrog
WATSON-CRICK
B
G
503
A
N2
G
3
1_555
B
C
571
A
O2
C
71
1_555
hydrog
WATSON-CRICK
B
G
503
A
O6
G
3
1_555
B
C
571
A
N4
C
71
1_555
hydrog
WATSON-CRICK
B
G
504
A
N1
G
4
1_555
B
C
570
A
N3
C
70
1_555
hydrog
WATSON-CRICK
B
G
504
A
N2
G
4
1_555
B
C
570
A
O2
C
70
1_555
hydrog
WATSON-CRICK
B
G
504
A
O6
G
4
1_555
B
C
570
A
N4
C
70
1_555
hydrog
WATSON-CRICK
B
C
505
A
N3
C
5
1_555
B
G
569
A
N1
G
69
1_555
hydrog
WATSON-CRICK
B
C
505
A
N4
C
5
1_555
B
G
569
A
O6
G
69
1_555
hydrog
WATSON-CRICK
B
C
505
A
O2
C
5
1_555
B
G
569
A
N2
G
69
1_555
hydrog
WATSON-CRICK
B
G
506
A
N1
G
6
1_555
B
C
568
A
N3
C
68
1_555
hydrog
WATSON-CRICK
B
G
506
A
N2
G
6
1_555
B
C
568
A
O2
C
68
1_555
hydrog
WATSON-CRICK
B
G
506
A
O6
G
6
1_555
B
C
568
A
N4
C
68
1_555
hydrog
WATSON-CRICK
B
G
507
A
N1
G
7
1_555
B
C
567
A
N3
C
67
1_555
hydrog
WATSON-CRICK
B
G
507
A
N2
G
7
1_555
B
C
567
A
O2
C
67
1_555
hydrog
WATSON-CRICK
B
G
507
A
O6
G
7
1_555
B
C
567
A
N4
C
67
1_555
hydrog
REVERSED HOOGSTEEN
B
U
508
A
N3
U
8
1_555
B
A
514
A
N7
A
14
1_555
hydrog
REVERSED HOOGSTEEN
B
U
508
A
O2
U
8
1_555
B
A
514
A
N6
A
14
1_555
hydrog
TYPE_2_PAIR
B
A
509
A
N6
A
9
1_555
B
A
524
A
N7
A
24
1_555
hydrog
TYPE_2_PAIR
B
A
509
A
N7
A
9
1_555
B
A
524
A
N6
A
24
1_555
hydrog
WATSON-CRICK
B
G
510
A
N1
G
10
1_555
B
C
526
A
N3
C
26
1_555
hydrog
WATSON-CRICK
B
G
510
A
N2
G
10
1_555
B
C
526
A
O2
C
26
1_555
hydrog
WATSON-CRICK
B
G
510
A
O6
G
10
1_555
B
C
526
A
N4
C
26
1_555
hydrog
G-U MISPAIR
B
G
510
A
O6
G
10
1_555
B
U
546
A
N3
U
46
1_555
hydrog
WATSON-CRICK
B
U
511
A
N3
U
11
1_555
B
A
525
A
N1
A
25
1_555
hydrog
WATSON-CRICK
B
U
511
A
O4
U
11
1_555
B
A
525
A
N6
A
25
1_555
hydrog
WATSON-CRICK
B
U
512
A
N3
U
12
1_555
B
A
524
A
N1
A
24
1_555
hydrog
WATSON-CRICK
B
U
512
A
O4
U
12
1_555
B
A
524
A
N6
A
24
1_555
hydrog
WATSON-CRICK
B
C
513
A
N3
C
13
1_555
B
G
523
A
N1
G
23
1_555
hydrog
WATSON-CRICK
B
C
513
A
N4
C
13
1_555
B
G
523
A
O6
G
23
1_555
hydrog
WATSON-CRICK
B
C
513
A
O2
C
13
1_555
B
G
523
A
N2
G
23
1_555
hydrog
A-A MISPAIR
B
A
514
A
N6
A
14
1_555
B
A
522
A
N3
A
22
1_555
hydrog
REVERSED WATSON-CRICK
B
G
515
A
N1
G
15
1_555
B
C
549
A
O2
C
49
1_555
hydrog
REVERSED WATSON-CRICK
B
G
515
A
N2
G
15
1_555
B
C
549
A
N3
C
49
1_555
hydrog
G-U MISPAIR
B
G
519
A
N1
G
19
1_555
B
U
556
A
O2
U
56
1_555
hydrog
WATSON-CRICK
B
G
520
A
N1
G
20
1_555
B
C
557
A
N3
C
57
1_555
hydrog
WATSON-CRICK
B
G
520
A
N2
G
20
1_555
B
C
557
A
O2
C
57
1_555
hydrog
WATSON-CRICK
B
G
520
A
O6
G
20
1_555
B
C
557
A
N4
C
57
1_555
hydrog
TYPE_7_PAIR
B
G
523
A
N7
G
23
1_555
B
G
547
A
N1
G
47
1_555
hydrog
TYPE_7_PAIR
B
G
523
A
O6
G
23
1_555
B
G
547
A
N2
G
47
1_555
hydrog
C-U MISPAIR
B
C
526
A
N4
C
26
1_555
B
U
546
A
O4
U
46
1_555
hydrog
TYPE_8_PAIR
B
G
527
A
N1
G
27
1_555
B
A
545
A
N1
A
45
1_555
hydrog
TYPE_8_PAIR
B
G
527
A
O6
G
27
1_555
B
A
545
A
N6
A
45
1_555
hydrog
WATSON-CRICK
B
G
528
A
N1
G
28
1_555
B
C
544
A
N3
C
44
1_555
hydrog
WATSON-CRICK
B
G
528
A
N2
G
28
1_555
B
C
544
A
O2
C
44
1_555
hydrog
WATSON-CRICK
B
G
528
A
O6
G
28
1_555
B
C
544
A
N4
C
44
1_555
hydrog
WATSON-CRICK
B
C
529
A
N3
C
29
1_555
B
G
543
A
N1
G
43
1_555
hydrog
WATSON-CRICK
B
C
529
A
N4
C
29
1_555
B
G
543
A
O6
G
43
1_555
hydrog
WATSON-CRICK
B
C
529
A
O2
C
29
1_555
B
G
543
A
N2
G
43
1_555
hydrog
WATSON-CRICK
B
G
530
A
N1
G
30
1_555
B
C
542
A
N3
C
42
1_555
hydrog
WATSON-CRICK
B
G
530
A
N2
G
30
1_555
B
C
542
A
O2
C
42
1_555
hydrog
WATSON-CRICK
B
G
530
A
O6
G
30
1_555
B
C
542
A
N4
C
42
1_555
hydrog
G-C PAIR
B
G
531
A
N1
G
31
1_555
B
C
541
A
N3
C
41
1_555
hydrog
WATSON-CRICK
B
A
532
A
N1
A
32
1_555
B
U
540
A
N3
U
40
1_555
hydrog
WATSON-CRICK
B
A
532
A
N6
A
32
1_555
B
U
540
A
O4
U
40
1_555
hydrog
C-A MISPAIR
B
C
533
A
O2
C
33
1_555
B
A
539
A
N6
A
39
1_555
hydrog
U-A PAIR
B
U
534
A
N3
U
34
1_555
B
A
537
A
N7
A
37
1_555
hydrog
WATSON-CRICK
B
G
550
A
N1
G
50
1_555
B
C
566
A
N3
C
66
1_555
hydrog
WATSON-CRICK
B
G
550
A
N2
G
50
1_555
B
C
566
A
O2
C
66
1_555
hydrog
WATSON-CRICK
B
G
550
A
O6
G
50
1_555
B
C
566
A
N4
C
66
1_555
hydrog
WATSON-CRICK
B
C
551
A
N3
C
51
1_555
B
G
565
A
N1
G
65
1_555
hydrog
WATSON-CRICK
B
C
551
A
N4
C
51
1_555
B
G
565
A
O6
G
65
1_555
hydrog
WATSON-CRICK
B
C
551
A
O2
C
51
1_555
B
G
565
A
N2
G
65
1_555
hydrog
TYPE_28_PAIR
B
U
552
A
N3
U
52
1_555
B
G
564
A
O6
G
64
1_555
hydrog
TYPE_28_PAIR
B
U
552
A
O2
U
52
1_555
B
G
564
A
N1
G
64
1_555
hydrog
WATSON-CRICK
B
G
553
A
N1
G
53
1_555
B
C
563
A
N3
C
63
1_555
hydrog
WATSON-CRICK
B
G
553
A
N2
G
53
1_555
B
C
563
A
O2
C
63
1_555
hydrog
WATSON-CRICK
B
G
553
A
O6
G
53
1_555
B
C
563
A
N4
C
63
1_555
hydrog
WATSON-CRICK
B
G
554
A
N1
G
54
1_555
B
C
562
A
N3
C
62
1_555
hydrog
WATSON-CRICK
B
G
554
A
N2
G
54
1_555
B
C
562
A
O2
C
62
1_555
hydrog
WATSON-CRICK
B
G
554
A
O6
G
54
1_555
B
C
562
A
N4
C
62
1_555
hydrog
REVERSED HOOGSTEEN
B
U
555
A
N3
U
55
1_555
B
A
559
A
N7
A
59
1_555
hydrog
REVERSED HOOGSTEEN
B
U
555
A
O2
U
55
1_555
B
A
559
A
N6
A
59
1_555
ligase/RNA
Aminoacyl-tRNA synthetase, ligase, tRNA, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, ligase-RNA COMPLEX
A
ILE
15
B
ILE
15
1
A
SER
16
B
SER
16
-0.20
A
TYR
251
B
TYR
251
1
A
PRO
252
B
PRO
252
-0.25
SYY_METJA
UNP
2
1
Q57834
MDEFEMIKRNTSEIISEEELREVLKKDEKSAYIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIIILLADLHAYLNQKGELD
EIRKIGDYNKKVFEAMGLKAKYVYGSEFQLDKDYTLNVYRLALKTTLKRARRSMELIAREDENPKVAEVIYPIMQVNDIH
YLGVDVAVGGMEQRKIHMLARELLPKKVVCIHNPVLTGLDGEGKMSSSKGNFIAVDDSPEEIRAKIKKAYCPAGVVEGNP
IMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELHPMDLKNAVAEELIKILEPIRKRL
1J1U
PDB
1
1J1U
1
306
1J1U
1
306
Q57834
A
1
1
306
501
577
1J1U
501
577
1J1U
B
2
1
77
6
2
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
A
GLU
13
B
GLU
13
A
ILE
15
B
ILE
15
A
VAL
189
B
VAL
189
A
ASN
193
B
ASN
193
A
VAL
166
B
VAL
166
A
GLY
170
B
GLY
170
A
LYS
29
B
LYS
29
A
PHE
35
B
PHE
35
A
PHE
60
B
PHE
60
A
LEU
66
B
LEU
66
A
LYS
101
B
LYS
101
A
TYR
104
B
TYR
104
A
LEU
253
B
LEU
253
A
ILE
255
B
ILE
255
A
LEU
265
B
LEU
265
A
VAL
267
B
VAL
267
BINDING SITE FOR RESIDUE MG B 1501
B
MG
1501
Software
5
BINDING SITE FOR RESIDUE MG B 1502
B
MG
1502
Software
6
BINDING SITE FOR RESIDUE MG A 503
A
MG
503
Software
3
BINDING SITE FOR RESIDUE MG B 1503
B
MG
1503
Software
6
BINDING SITE FOR RESIDUE TYR A 401
A
TYR
401
Software
12
B
HOH
60
H
HOH
5
1_555
B
HOH
350
H
HOH
5
1_555
B
A
509
A
A
9
5
1_555
B
G
510
A
G
10
5
1_555
B
U
548
A
U
48
5
1_555
B
HOH
61
H
HOH
6
1_555
B
HOH
288
H
HOH
6
1_555
B
HOH
289
H
HOH
6
1_555
B
HOH
290
H
HOH
6
1_555
B
HOH
291
H
HOH
6
1_555
B
HOH
292
H
HOH
6
1_555
A
HIS
160
B
HIS
160
3
1_555
A
HOH
722
I
HOH
3
1_555
A
HOH
723
I
HOH
3
1_555
B
HOH
18
H
HOH
6
1_555
B
HOH
77
H
HOH
6
1_555
B
HOH
278
H
HOH
6
1_555
B
HOH
359
H
HOH
6
1_555
B
HOH
360
H
HOH
6
1_555
B
HOH
361
H
HOH
6
1_555
A
TYR
32
B
TYR
32
12
1_555
A
GLY
34
B
GLY
34
12
1_555
A
GLU
36
B
GLU
36
12
1_555
A
LEU
65
B
LEU
65
12
1_555
A
ALA
67
B
ALA
67
12
1_555
A
HIS
70
B
HIS
70
12
1_555
A
TYR
151
B
TYR
151
12
1_555
A
GLN
155
B
GLN
155
12
1_555
A
ASP
158
B
ASP
158
12
1_555
A
GLN
173
B
GLN
173
12
1_555
A
HOH
599
I
HOH
12
1_555
A
HOH
705
I
HOH
12
1_555
152
P 31 2 1