1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Nameki, N.
Kigawa, T.
Koshiba, S.
Kobayashi, N.
Tochio, N.
Inoue, M.
Yokoyama, S.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
N
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
C
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
Y
320
N
sing
Y
321
N
sing
N
322
N
sing
Y
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
1089-8638
10.1016/j.jmb.2010.09.033
20869366
Solution structure of the catalytic domain of the mitochondrial protein ICT1 that is essential for cell vitality
2010
10.2210/pdb1j26/pdb
pdb_00001j26
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
12152.575
immature colon carcinoma transcript 1
peptidyl-tRNA hydrolase domain
1
man
polymer
no
no
GSSGSSGEHAKQASSYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINKAGELVL
TSESSRYQFRNLAECLQKIRDMIAEASGPSSG
GSSGSSGEHAKQASSYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINKAGELVL
TSESSRYQFRNLAECLQKIRDMIAEASGPSSG
A
mma001000238.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
sample
NIA Mouse 15K cDNA Clone: H3024H01
10090
Mus musculus
Cell-free protein synthesis
Plasmid
P020715-17
RIKEN Structural Genomics/Proteomics Initiative
RSGI
chem_comp_atom
chem_comp_bond
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
2004-06-01
1
1
2008-04-27
1
2
2011-07-13
1
3
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
HELIX
Determination method: author determined
Y
PDBJ
Y
PDBJ
2002-12-25
REL
structures with the least restraint violations, structures with the lowest energy, target function
100
20
3D_13C-separated_NOESY
3D_15N-separated_NOESY
120mM
6.0
ambient
298
K
torsion angle dynamics, molecular dynamics
1
lowest energy
1.7mM peptidyl-tRNA hydrolase domain U-15N, 13C; 20mM phosphate buffer NA; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O
90% H2O/10% D2O
Bruker
collection
XwinNMR
2.6
Delaglio, F.
processing
NMRPipe
20020425
Johnson, B.A.
data analysis
NMRView
5.0.4
Kobayashi, N.
data analysis
KUJIRA
0.704
Guentert, P.
structure solution
CYANA
1.0.7
Guentert, P.
refinement
OPALp
800
Bruker
AVANCE
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
SER
3
n
3
SER
3
A
GLY
4
n
4
GLY
4
A
SER
5
n
5
SER
5
A
SER
6
n
6
SER
6
A
GLY
7
n
7
GLY
7
A
GLU
8
n
8
GLU
8
A
HIS
9
n
9
HIS
9
A
ALA
10
n
10
ALA
10
A
LYS
11
n
11
LYS
11
A
GLN
12
n
12
GLN
12
A
ALA
13
n
13
ALA
13
A
SER
14
n
14
SER
14
A
SER
15
n
15
SER
15
A
TYR
16
n
16
TYR
16
A
ILE
17
n
17
ILE
17
A
PRO
18
n
18
PRO
18
A
LEU
19
n
19
LEU
19
A
ASP
20
n
20
ASP
20
A
ARG
21
n
21
ARG
21
A
LEU
22
n
22
LEU
22
A
SER
23
n
23
SER
23
A
ILE
24
n
24
ILE
24
A
SER
25
n
25
SER
25
A
TYR
26
n
26
TYR
26
A
CYS
27
n
27
CYS
27
A
ARG
28
n
28
ARG
28
A
SER
29
n
29
SER
29
A
SER
30
n
30
SER
30
A
GLY
31
n
31
GLY
31
A
PRO
32
n
32
PRO
32
A
GLY
33
n
33
GLY
33
A
GLY
34
n
34
GLY
34
A
GLN
35
n
35
GLN
35
A
ASN
36
n
36
ASN
36
A
VAL
37
n
37
VAL
37
A
ASN
38
n
38
ASN
38
A
LYS
39
n
39
LYS
39
A
VAL
40
n
40
VAL
40
A
ASN
41
n
41
ASN
41
A
SER
42
n
42
SER
42
A
LYS
43
n
43
LYS
43
A
ALA
44
n
44
ALA
44
A
GLU
45
n
45
GLU
45
A
VAL
46
n
46
VAL
46
A
ARG
47
n
47
ARG
47
A
PHE
48
n
48
PHE
48
A
HIS
49
n
49
HIS
49
A
LEU
50
n
50
LEU
50
A
ALA
51
n
51
ALA
51
A
SER
52
n
52
SER
52
A
ALA
53
n
53
ALA
53
A
ASP
54
n
54
ASP
54
A
TRP
55
n
55
TRP
55
A
ILE
56
n
56
ILE
56
A
GLU
57
n
57
GLU
57
A
GLU
58
n
58
GLU
58
A
PRO
59
n
59
PRO
59
A
VAL
60
n
60
VAL
60
A
ARG
61
n
61
ARG
61
A
GLN
62
n
62
GLN
62
A
LYS
63
n
63
LYS
63
A
ILE
64
n
64
ILE
64
A
ALA
65
n
65
ALA
65
A
LEU
66
n
66
LEU
66
A
THR
67
n
67
THR
67
A
HIS
68
n
68
HIS
68
A
LYS
69
n
69
LYS
69
A
ASN
70
n
70
ASN
70
A
LYS
71
n
71
LYS
71
A
ILE
72
n
72
ILE
72
A
ASN
73
n
73
ASN
73
A
LYS
74
n
74
LYS
74
A
ALA
75
n
75
ALA
75
A
GLY
76
n
76
GLY
76
A
GLU
77
n
77
GLU
77
A
LEU
78
n
78
LEU
78
A
VAL
79
n
79
VAL
79
A
LEU
80
n
80
LEU
80
A
THR
81
n
81
THR
81
A
SER
82
n
82
SER
82
A
GLU
83
n
83
GLU
83
A
SER
84
n
84
SER
84
A
SER
85
n
85
SER
85
A
ARG
86
n
86
ARG
86
A
TYR
87
n
87
TYR
87
A
GLN
88
n
88
GLN
88
A
PHE
89
n
89
PHE
89
A
ARG
90
n
90
ARG
90
A
ASN
91
n
91
ASN
91
A
LEU
92
n
92
LEU
92
A
ALA
93
n
93
ALA
93
A
GLU
94
n
94
GLU
94
A
CYS
95
n
95
CYS
95
A
LEU
96
n
96
LEU
96
A
GLN
97
n
97
GLN
97
A
LYS
98
n
98
LYS
98
A
ILE
99
n
99
ILE
99
A
ARG
100
n
100
ARG
100
A
ASP
101
n
101
ASP
101
A
MET
102
n
102
MET
102
A
ILE
103
n
103
ILE
103
A
ALA
104
n
104
ALA
104
A
GLU
105
n
105
GLU
105
A
ALA
106
n
106
ALA
106
A
SER
107
n
107
SER
107
A
GLY
108
n
108
GLY
108
A
PRO
109
n
109
PRO
109
A
SER
110
n
110
SER
110
A
SER
111
n
111
SER
111
A
GLY
112
n
112
GLY
112
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
23
A
N
SER
23
A
O
ARG
47
A
O
ARG
47
A
N
PHE
48
A
N
PHE
48
A
O
LEU
78
A
O
LEU
78
1
A
A
HG
OE1
SER
GLU
82
94
1.59
3
A
A
HG
OE2
SER
GLU
82
94
1.56
5
A
A
HG1
OE1
THR
GLU
81
83
1.59
6
A
A
HG
OE2
SER
GLU
82
94
1.58
8
A
A
HG
OE2
SER
GLU
82
94
1.56
10
A
A
OE2
HG
GLU
SER
57
107
1.59
14
A
A
HG
OE2
SER
GLU
82
94
1.54
17
A
A
HG1
OE1
THR
GLU
81
83
1.59
19
A
A
OE2
HG
GLU
SER
57
107
1.56
20
A
A
HG1
OE2
THR
GLU
81
83
1.56
2
A
A
ARG
SER
28
29
-141.18
5
A
A
GLY
SER
1
2
147.37
9
A
A
GLY
SER
1
2
147.57
9
A
A
LYS
VAL
39
40
145.87
16
A
A
SER
GLY
30
31
145.96
1
A
ARG
21
0.078
SIDE CHAIN
1
A
TYR
26
0.063
SIDE CHAIN
1
A
ARG
28
0.099
SIDE CHAIN
3
A
ARG
28
0.169
SIDE CHAIN
4
A
TYR
26
0.093
SIDE CHAIN
6
A
TYR
16
0.084
SIDE CHAIN
7
A
ARG
90
0.117
SIDE CHAIN
8
A
TYR
26
0.070
SIDE CHAIN
8
A
ARG
100
0.078
SIDE CHAIN
9
A
ARG
61
0.081
SIDE CHAIN
10
A
TYR
26
0.063
SIDE CHAIN
10
A
ARG
61
0.075
SIDE CHAIN
10
A
ARG
100
0.124
SIDE CHAIN
11
A
ARG
28
0.079
SIDE CHAIN
12
A
ARG
21
0.080
SIDE CHAIN
12
A
ARG
86
0.095
SIDE CHAIN
13
A
ARG
86
0.104
SIDE CHAIN
13
A
ARG
100
0.135
SIDE CHAIN
14
A
TYR
26
0.074
SIDE CHAIN
14
A
TYR
87
0.088
SIDE CHAIN
15
A
TYR
26
0.064
SIDE CHAIN
15
A
TYR
87
0.087
SIDE CHAIN
16
A
TYR
26
0.118
SIDE CHAIN
18
A
ARG
90
0.100
SIDE CHAIN
19
A
ARG
28
0.091
SIDE CHAIN
19
A
ARG
61
0.096
SIDE CHAIN
20
A
ARG
21
0.131
SIDE CHAIN
5
3.44
0.50
120.30
123.74
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
86
86
86
N
7
-4.52
0.60
121.00
116.48
A
A
A
CB
CG
CD2
TYR
TYR
TYR
26
26
26
N
13
-3.12
0.50
120.30
117.18
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
21
21
21
N
1
A
SER
2
-69.64
84.83
1
A
SER
3
50.14
-139.86
1
A
SER
5
48.97
75.29
1
A
GLN
12
-74.73
-75.67
1
A
SER
15
-148.20
-27.35
1
A
ILE
17
50.11
95.72
1
A
SER
29
80.46
122.31
1
A
ASN
36
-68.13
-71.25
1
A
VAL
37
32.16
64.97
1
A
LYS
74
141.17
-49.57
1
A
SER
84
-162.64
-6.99
1
A
GLN
88
-79.93
-71.73
1
A
SER
110
-156.45
-53.33
1
A
SER
111
-175.61
120.17
2
A
ALA
10
58.86
-169.53
2
A
LYS
11
65.79
-3.84
2
A
SER
14
42.35
89.45
2
A
ILE
17
54.34
101.30
2
A
SER
29
58.25
138.00
2
A
SER
30
135.06
162.18
2
A
PRO
32
-78.44
45.76
2
A
GLN
35
153.09
59.14
2
A
ASN
36
78.87
-56.95
2
A
ASN
38
61.94
-52.93
2
A
LYS
39
-139.74
-117.76
2
A
VAL
40
65.43
-82.03
2
A
ASN
41
73.26
73.73
2
A
SER
42
-149.70
52.35
2
A
ASP
54
-84.84
38.67
2
A
TRP
55
-141.49
-0.15
2
A
LYS
74
133.39
-60.09
2
A
SER
84
-148.66
-14.41
2
A
GLN
88
-90.60
-85.12
2
A
SER
110
-66.38
96.53
2
A
SER
111
66.46
149.32
3
A
SER
5
63.54
177.95
3
A
ALA
13
122.12
157.90
3
A
ILE
17
54.81
103.90
3
A
ARG
28
142.19
-20.45
3
A
SER
29
56.69
147.05
3
A
SER
30
-141.31
-33.09
3
A
GLN
35
-136.79
-119.02
3
A
ASN
41
-153.88
38.57
3
A
ASP
54
77.73
-39.61
3
A
LYS
74
-175.54
-40.05
3
A
SER
84
-156.61
-1.96
3
A
TYR
87
-69.00
-176.94
3
A
GLN
88
-104.72
-85.50
4
A
SER
2
110.49
125.94
4
A
ALA
13
63.14
174.92
4
A
SER
15
-140.84
-4.35
4
A
ILE
17
56.09
91.83
4
A
CYS
27
-131.25
-106.53
4
A
ARG
28
-145.42
-62.80
4
A
SER
29
148.16
135.52
4
A
GLN
35
-76.59
-144.93
4
A
ASN
36
-59.82
17.53
4
A
ASN
38
-106.54
-68.59
4
A
ASN
73
-78.37
-142.46
4
A
SER
84
-166.28
-26.48
4
A
GLN
88
-88.95
-86.69
4
A
PRO
109
-82.93
43.62
4
A
SER
110
51.95
-170.32
5
A
SER
2
-58.58
171.75
5
A
SER
6
-52.15
-73.61
5
A
GLU
8
-32.69
98.96
5
A
HIS
9
-150.49
1.39
5
A
GLN
12
34.85
63.54
5
A
SER
14
-145.03
31.79
5
A
SER
15
-67.28
25.77
5
A
TYR
16
-117.89
-73.03
5
A
ILE
17
63.92
106.25
5
A
CYS
27
-129.99
-166.10
5
A
SER
29
156.32
178.34
5
A
GLN
35
52.29
-81.77
5
A
ASN
36
-144.56
18.87
5
A
ASN
41
-151.81
65.23
5
A
HIS
49
-59.65
104.33
5
A
ASP
54
87.89
6.69
5
A
LEU
66
-101.95
-64.65
5
A
LYS
74
174.33
-52.65
5
A
SER
84
-153.13
-32.93
5
A
GLN
88
-97.16
-78.75
6
A
SER
6
54.15
-162.68
6
A
HIS
9
-149.81
22.98
6
A
SER
15
-144.74
-4.47
6
A
ILE
17
29.54
93.27
6
A
SER
29
179.12
171.78
6
A
GLN
35
-134.27
-133.70
6
A
ASN
38
52.48
-79.43
6
A
SER
42
150.62
108.81
6
A
ASP
54
84.48
-36.78
6
A
LEU
66
-100.88
-60.48
6
A
LYS
74
178.63
-45.35
6
A
ALA
75
-64.77
0.60
6
A
SER
84
-157.33
-11.65
6
A
GLN
88
-104.55
-74.17
7
A
SER
15
156.35
-15.15
7
A
ILE
17
50.55
91.45
7
A
SER
30
59.63
-167.56
7
A
GLN
35
-131.45
-113.16
7
A
ASN
38
58.08
-1.17
7
A
LYS
39
-130.61
-85.22
7
A
ASP
54
65.16
-7.94
7
A
LEU
66
-100.86
-60.85
7
A
LYS
74
176.73
-43.85
7
A
SER
84
-140.84
-57.32
7
A
GLN
88
-90.88
-73.58
8
A
SER
6
-157.36
18.68
8
A
LYS
11
-140.11
-55.95
8
A
SER
15
-116.85
62.62
8
A
TYR
16
-105.93
-61.26
8
A
ILE
17
47.94
106.77
8
A
CYS
27
-160.63
-169.90
8
A
SER
29
-133.85
-67.07
8
A
SER
30
55.78
172.06
8
A
PRO
32
-74.95
27.26
8
A
ASN
36
75.21
-43.96
8
A
VAL
37
-64.09
21.59
8
A
ASP
54
71.58
-9.70
8
A
LEU
66
-100.91
-65.33
8
A
LYS
74
133.56
-52.18
8
A
SER
84
-166.95
-31.30
8
A
GLN
88
-94.92
-95.20
9
A
SER
6
48.99
19.46
9
A
LYS
11
57.58
19.08
9
A
GLN
12
-96.28
49.42
9
A
SER
14
-80.13
41.25
9
A
ILE
17
26.26
92.21
9
A
SER
29
84.90
117.08
9
A
GLN
35
63.40
-74.25
9
A
ASN
36
-153.10
-59.89
9
A
VAL
37
19.86
59.77
9
A
ASN
41
-151.75
26.15
9
A
HIS
49
-64.56
83.55
9
A
ASP
54
77.08
-38.65
9
A
ASN
73
-66.42
-96.88
9
A
LYS
74
-141.44
-26.62
9
A
SER
84
-162.59
-16.82
9
A
GLN
88
-101.70
-65.37
10
A
SER
5
-160.95
-53.18
10
A
GLU
8
61.16
-162.09
10
A
SER
14
43.81
-143.84
10
A
ILE
17
39.15
95.94
10
A
SER
29
138.08
-103.12
10
A
SER
30
-124.50
-88.15
10
A
GLN
35
-149.25
-85.78
10
A
ASN
36
-139.83
-38.01
10
A
VAL
37
-31.31
98.21
10
A
ASN
38
-88.91
-74.34
10
A
LYS
39
-141.96
-88.05
10
A
ASN
41
61.43
-35.66
10
A
LYS
74
-168.00
-46.55
10
A
SER
84
-154.47
10.75
10
A
GLN
88
-98.25
-73.45
11
A
GLU
8
-163.41
114.49
11
A
ALA
13
66.94
173.37
11
A
SER
14
51.52
-163.28
11
A
SER
15
65.63
-3.50
11
A
ILE
17
12.01
99.65
11
A
LEU
22
-107.24
-168.97
11
A
ARG
28
-62.52
-71.95
11
A
GLN
35
-62.78
-77.09
11
A
ASN
36
-161.12
-68.37
11
A
ASN
38
-37.84
-74.44
11
A
HIS
49
-62.79
89.15
11
A
ASP
54
74.27
-27.24
11
A
ASN
73
-77.89
-140.13
11
A
SER
84
-153.00
-19.97
11
A
SER
85
-133.59
-129.34
11
A
GLN
88
-117.47
-83.28
11
A
SER
110
-58.44
-84.11
12
A
GLU
8
34.00
80.90
12
A
ALA
10
42.65
75.90
12
A
ALA
13
57.95
175.01
12
A
SER
14
-62.75
85.84
12
A
TYR
16
-67.56
-75.70
12
A
ILE
17
60.57
103.55
12
A
ARG
28
-71.02
-78.84
12
A
SER
29
-179.68
57.99
12
A
ASN
36
70.15
-1.07
12
A
VAL
37
-85.99
47.37
12
A
LEU
66
-101.66
-66.22
12
A
ASN
73
-69.94
-93.75
12
A
LYS
74
-137.59
-30.68
12
A
SER
84
-173.39
-36.57
12
A
GLN
88
-95.58
-78.63
13
A
GLU
8
-151.09
-61.42
13
A
HIS
9
66.71
167.51
13
A
GLN
12
-76.53
29.20
13
A
TYR
16
-140.84
-61.32
13
A
ILE
17
68.45
101.51
13
A
GLN
35
-137.07
-147.28
13
A
VAL
37
23.06
98.42
13
A
ASN
41
56.51
-97.52
13
A
SER
42
36.69
49.00
13
A
LYS
74
176.92
-30.31
13
A
SER
84
-174.90
-20.95
13
A
GLN
88
-112.56
-76.61
13
A
SER
110
45.73
-176.39
13
A
SER
111
-152.33
76.78
14
A
SER
5
-125.81
-142.58
14
A
SER
6
-173.47
-68.88
14
A
GLN
12
61.14
-173.38
14
A
SER
15
-152.22
60.29
14
A
TYR
16
-125.76
-72.33
14
A
ILE
17
60.29
95.97
14
A
ASN
36
-144.03
-10.20
14
A
ASN
38
69.35
-49.08
14
A
LYS
39
-141.05
-89.19
14
A
VAL
40
18.04
74.60
14
A
SER
42
-148.20
59.49
14
A
HIS
49
-61.03
98.43
14
A
LEU
66
-101.07
-63.51
14
A
ASN
73
-66.82
-96.69
14
A
LYS
74
-149.97
-43.59
14
A
ALA
75
-68.60
7.59
14
A
SER
84
-169.18
-52.59
14
A
SER
110
-151.72
88.22
15
A
SER
5
69.17
-21.39
15
A
ALA
13
51.92
169.38
15
A
SER
15
61.64
-42.72
15
A
ILE
17
22.89
95.53
15
A
CYS
27
-160.64
-169.48
15
A
SER
29
64.78
-81.30
15
A
GLN
35
-173.37
-52.17
15
A
ASN
36
-171.65
-14.53
15
A
ASN
38
67.19
-62.99
15
A
LYS
39
-128.12
-80.37
15
A
SER
42
-164.87
76.60
15
A
LEU
66
-101.18
-62.80
15
A
ASN
73
-65.06
-71.85
15
A
LYS
74
-165.85
-37.60
15
A
SER
84
-173.34
33.95
15
A
GLN
88
-110.48
-73.78
15
A
SER
110
-61.04
97.23
15
A
SER
111
62.08
-62.11
16
A
SER
2
69.52
141.34
16
A
SER
6
30.40
56.23
16
A
GLU
8
-59.50
98.93
16
A
HIS
9
41.88
26.68
16
A
GLN
12
53.52
174.47
16
A
ALA
13
-98.10
-62.40
16
A
ILE
17
63.81
103.69
16
A
GLN
35
-173.22
-61.69
16
A
ASN
38
-52.36
-73.56
16
A
LYS
39
-140.71
15.85
16
A
ASN
41
33.11
64.40
16
A
HIS
49
-59.92
103.21
16
A
LYS
74
-179.67
-50.59
16
A
SER
84
-147.51
-29.38
16
A
GLN
88
-74.96
-76.71
17
A
SER
5
-151.16
77.59
17
A
GLU
8
39.17
49.75
17
A
ALA
10
-59.81
85.08
17
A
ALA
13
-67.57
-88.37
17
A
SER
14
-165.39
98.84
17
A
ILE
17
46.95
104.00
17
A
SER
30
-171.31
48.05
17
A
GLN
35
-141.43
-145.60
17
A
ASN
38
-68.44
-89.36
17
A
SER
42
137.22
108.40
17
A
ASP
54
80.74
-25.69
17
A
ASN
73
-70.35
-101.52
17
A
LYS
74
-142.41
-31.28
17
A
SER
84
-149.45
-17.46
17
A
GLN
88
-93.73
-79.92
17
A
SER
111
-68.88
89.71
18
A
SER
2
-163.48
-57.28
18
A
LYS
11
77.73
142.99
18
A
ALA
13
-153.93
-120.34
18
A
ILE
17
47.44
98.62
18
A
SER
29
-172.84
-173.54
18
A
SER
30
144.60
170.78
18
A
GLN
35
-142.71
-158.63
18
A
ASN
36
97.12
1.37
18
A
VAL
37
-86.49
45.93
18
A
SER
42
-140.26
54.98
18
A
ASP
54
81.30
-30.58
18
A
LEU
66
-101.52
-61.69
18
A
ASN
73
-65.62
-73.60
18
A
LYS
74
-161.88
-48.93
18
A
SER
84
-175.81
-47.18
18
A
PRO
109
-68.55
97.08
19
A
SER
3
-169.42
87.97
19
A
HIS
9
135.99
96.99
19
A
LYS
11
-86.73
43.66
19
A
SER
15
-69.40
4.77
19
A
ILE
17
66.94
97.65
19
A
CYS
27
-166.84
-151.87
19
A
SER
30
78.20
-23.42
19
A
GLN
35
-83.47
-139.63
19
A
VAL
37
-78.87
35.70
19
A
LEU
66
-100.70
-60.16
19
A
LYS
74
151.56
-39.48
19
A
SER
84
-154.39
2.88
19
A
SER
85
-90.26
-104.08
19
A
ARG
86
160.80
-19.86
19
A
SER
111
62.65
160.84
20
A
SER
2
66.21
158.33
20
A
SER
6
57.14
179.96
20
A
ALA
10
53.63
-161.74
20
A
SER
14
-64.62
-178.30
20
A
TYR
16
-78.41
-86.35
20
A
ILE
17
61.78
118.40
20
A
SER
29
168.58
-66.02
20
A
SER
30
105.92
89.32
20
A
GLN
35
54.05
-89.90
20
A
LYS
39
-136.15
-63.32
20
A
SER
42
71.74
93.89
20
A
ASP
54
67.94
-19.19
20
A
ASN
73
-67.44
-85.85
20
A
LYS
74
-158.09
-35.46
20
A
SER
84
-148.57
-16.10
20
A
GLN
88
-82.67
-78.38
Solution structure of a putative peptidyl-tRNA hydrolase domain in a mouse hypothetical protein
1
N
N
A
GLU
58
A
GLU
58
HELX_P
A
THR
67
A
THR
67
1
1
10
A
PHE
89
A
PHE
89
HELX_P
A
SER
107
A
SER
107
1
2
19
TRANSLATION
peptide chain release factors, RF-1, the GGQ motif, immature colon carcinoma transcript 1, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, Translation
ICT1_MOUSE
UNP
1
63
Q8R035
EHAKQASSYIPLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALTHKNKINKAGELVLTSESSRY
QFRNLAECLQKIRDMIAEA
63
161
1J26
8
106
Q8R035
A
1
8
106
1
expression tag
GLY
1
1J26
A
Q8R035
UNP
1
1
expression tag
SER
2
1J26
A
Q8R035
UNP
2
1
expression tag
SER
3
1J26
A
Q8R035
UNP
3
1
expression tag
GLY
4
1J26
A
Q8R035
UNP
4
1
expression tag
SER
5
1J26
A
Q8R035
UNP
5
1
expression tag
SER
6
1J26
A
Q8R035
UNP
6
1
expression tag
GLY
7
1J26
A
Q8R035
UNP
7
1
expression tag
SER
107
1J26
A
Q8R035
UNP
107
1
expression tag
GLY
108
1J26
A
Q8R035
UNP
108
1
expression tag
PRO
109
1J26
A
Q8R035
UNP
109
1
expression tag
SER
110
1J26
A
Q8R035
UNP
110
1
expression tag
SER
111
1J26
A
Q8R035
UNP
111
1
expression tag
GLY
112
1J26
A
Q8R035
UNP
112
3
anti-parallel
anti-parallel
A
SER
23
A
SER
23
A
CYS
27
A
CYS
27
A
LYS
43
A
LYS
43
A
HIS
49
A
HIS
49
A
GLU
77
A
GLU
77
A
SER
82
A
SER
82
1
P 1