1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Kurita, J.
Shimahara, H.
Yoshida, M.
Tate, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
N
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
Y
320
N
sing
Y
321
N
sing
N
322
N
sing
Y
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
To be Published
0353
Strucutral comparison of two HMG-boxes in the non-histone protein HMG-2 with in the HMG-1
10.2210/pdb1j3c/pdb
pdb_00001j3c
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
9109.550
High mobility group protein 2
C-TERMINAL DOMAIN, B domain
H22Y
1
man
polymer
High mobility group B2, HMG2, HMGB2
no
no
MKKKDPNAPKRPPSAFFLFCSEYRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK
MKKKDPNAPKRPPSAFFLFCSEYRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
pig
Sus
Escherichia
sample
9823
Sus scrofa
562
Escherichia coli
pET
PLASMID
pET-22b
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
1
0
2004-05-25
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-11-10
1
4
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
PDBJ
Y
PDBJ
2003-01-23
REL
REL
The structure was determined using triple-resonance NMR spectroscopy.
structures with the lowest energy
100
30
3D_13C-separated_NOESY
3D_15N-separated_NOESY
2D NOESY
CT-HMQC
IPAP
5.0
ambient
298
K
6.4
ambient
303
K
simulated annealing
1
lowest energy
1mM C-terminal Domain U-15N,13C; 50mM Acetate buffer Na;
95% H2O/5% D2O
1mM C-terminal Domain U-15N; 50mM Acetate buffer Na;
95% H2O/5% D2O
1mM C-terminal Domain non-label; 50mM Acetate buffer Na
100% D2O
1mM C-terminal Domain U-15N; 50mM phosphate buffer Na;
87.5% H2O, 5% D2O, 7.5 % bicelle
Nilges
structure solution
ARIA
1.1
Brunger
refinement
X-PLOR
3.851
Delaglio
processing
NMRPipe
2001.157.17.50
750
Varian
INOVA
MET
1
n
1
MET
1
A
LYS
2
n
2
LYS
2
A
LYS
3
n
3
LYS
3
A
LYS
4
n
4
LYS
4
A
ASP
5
n
5
ASP
5
A
PRO
6
n
6
PRO
6
A
ASN
7
n
7
ASN
7
A
ALA
8
n
8
ALA
8
A
PRO
9
n
9
PRO
9
A
LYS
10
n
10
LYS
10
A
ARG
11
n
11
ARG
11
A
PRO
12
n
12
PRO
12
A
PRO
13
n
13
PRO
13
A
SER
14
n
14
SER
14
A
ALA
15
n
15
ALA
15
A
PHE
16
n
16
PHE
16
A
PHE
17
n
17
PHE
17
A
LEU
18
n
18
LEU
18
A
PHE
19
n
19
PHE
19
A
CYS
20
n
20
CYS
20
A
SER
21
n
21
SER
21
A
GLU
22
n
22
GLU
22
A
TYR
23
n
23
TYR
23
A
ARG
24
n
24
ARG
24
A
PRO
25
n
25
PRO
25
A
LYS
26
n
26
LYS
26
A
ILE
27
n
27
ILE
27
A
LYS
28
n
28
LYS
28
A
SER
29
n
29
SER
29
A
GLU
30
n
30
GLU
30
A
HIS
31
n
31
HIS
31
A
PRO
32
n
32
PRO
32
A
GLY
33
n
33
GLY
33
A
LEU
34
n
34
LEU
34
A
SER
35
n
35
SER
35
A
ILE
36
n
36
ILE
36
A
GLY
37
n
37
GLY
37
A
ASP
38
n
38
ASP
38
A
THR
39
n
39
THR
39
A
ALA
40
n
40
ALA
40
A
LYS
41
n
41
LYS
41
A
LYS
42
n
42
LYS
42
A
LEU
43
n
43
LEU
43
A
GLY
44
n
44
GLY
44
A
GLU
45
n
45
GLU
45
A
MET
46
n
46
MET
46
A
TRP
47
n
47
TRP
47
A
SER
48
n
48
SER
48
A
GLU
49
n
49
GLU
49
A
GLN
50
n
50
GLN
50
A
SER
51
n
51
SER
51
A
ALA
52
n
52
ALA
52
A
LYS
53
n
53
LYS
53
A
ASP
54
n
54
ASP
54
A
LYS
55
n
55
LYS
55
A
GLN
56
n
56
GLN
56
A
PRO
57
n
57
PRO
57
A
TYR
58
n
58
TYR
58
A
GLU
59
n
59
GLU
59
A
GLN
60
n
60
GLN
60
A
LYS
61
n
61
LYS
61
A
ALA
62
n
62
ALA
62
A
ALA
63
n
63
ALA
63
A
LYS
64
n
64
LYS
64
A
LEU
65
n
65
LEU
65
A
LYS
66
n
66
LYS
66
A
GLU
67
n
67
GLU
67
A
LYS
68
n
68
LYS
68
A
TYR
69
n
69
TYR
69
A
GLU
70
n
70
GLU
70
A
LYS
71
n
71
LYS
71
A
ASP
72
n
72
ASP
72
A
ILE
73
n
73
ILE
73
A
ALA
74
n
74
ALA
74
A
ALA
75
n
75
ALA
75
A
TYR
76
n
76
TYR
76
A
ARG
77
n
77
ARG
77
A
ALA
78
n
78
ALA
78
A
LYS
79
n
79
LYS
79
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ARG
11
0.269
SIDE CHAIN
1
A
ARG
24
0.231
SIDE CHAIN
1
A
ARG
77
0.280
SIDE CHAIN
2
A
ARG
11
0.254
SIDE CHAIN
2
A
ARG
24
0.315
SIDE CHAIN
2
A
ARG
77
0.253
SIDE CHAIN
3
A
ARG
11
0.308
SIDE CHAIN
3
A
ARG
24
0.304
SIDE CHAIN
3
A
ARG
77
0.280
SIDE CHAIN
4
A
ARG
11
0.302
SIDE CHAIN
4
A
ARG
24
0.231
SIDE CHAIN
4
A
ARG
77
0.317
SIDE CHAIN
5
A
ARG
11
0.284
SIDE CHAIN
5
A
ARG
24
0.290
SIDE CHAIN
5
A
ARG
77
0.300
SIDE CHAIN
6
A
ARG
11
0.302
SIDE CHAIN
6
A
ARG
24
0.316
SIDE CHAIN
6
A
ARG
77
0.313
SIDE CHAIN
7
A
ARG
11
0.231
SIDE CHAIN
7
A
ARG
24
0.307
SIDE CHAIN
7
A
ARG
77
0.269
SIDE CHAIN
8
A
ARG
11
0.315
SIDE CHAIN
8
A
ARG
24
0.299
SIDE CHAIN
8
A
ARG
77
0.258
SIDE CHAIN
9
A
ARG
11
0.284
SIDE CHAIN
9
A
ARG
24
0.269
SIDE CHAIN
9
A
ARG
77
0.303
SIDE CHAIN
10
A
ARG
11
0.292
SIDE CHAIN
10
A
ARG
24
0.315
SIDE CHAIN
10
A
ARG
77
0.303
SIDE CHAIN
11
A
ARG
11
0.310
SIDE CHAIN
11
A
ARG
24
0.242
SIDE CHAIN
11
A
ARG
77
0.316
SIDE CHAIN
12
A
ARG
11
0.317
SIDE CHAIN
12
A
ARG
24
0.304
SIDE CHAIN
12
A
ARG
77
0.314
SIDE CHAIN
13
A
ARG
11
0.317
SIDE CHAIN
13
A
ARG
24
0.288
SIDE CHAIN
13
A
ARG
77
0.286
SIDE CHAIN
14
A
ARG
11
0.317
SIDE CHAIN
14
A
ARG
24
0.283
SIDE CHAIN
14
A
ARG
77
0.302
SIDE CHAIN
15
A
ARG
11
0.240
SIDE CHAIN
15
A
ARG
24
0.283
SIDE CHAIN
15
A
ARG
77
0.310
SIDE CHAIN
16
A
ARG
11
0.317
SIDE CHAIN
16
A
ARG
24
0.308
SIDE CHAIN
16
A
ARG
77
0.267
SIDE CHAIN
17
A
ARG
11
0.294
SIDE CHAIN
17
A
ARG
24
0.296
SIDE CHAIN
17
A
ARG
77
0.299
SIDE CHAIN
18
A
ARG
11
0.267
SIDE CHAIN
18
A
ARG
24
0.262
SIDE CHAIN
18
A
ARG
77
0.263
SIDE CHAIN
19
A
ARG
11
0.296
SIDE CHAIN
19
A
ARG
24
0.244
SIDE CHAIN
19
A
ARG
77
0.311
SIDE CHAIN
20
A
ARG
11
0.298
SIDE CHAIN
20
A
ARG
24
0.287
SIDE CHAIN
20
A
ARG
77
0.292
SIDE CHAIN
21
A
ARG
11
0.316
SIDE CHAIN
21
A
ARG
24
0.284
SIDE CHAIN
21
A
ARG
77
0.291
SIDE CHAIN
22
A
ARG
11
0.314
SIDE CHAIN
22
A
ARG
24
0.289
SIDE CHAIN
22
A
ARG
77
0.288
SIDE CHAIN
23
A
ARG
11
0.312
SIDE CHAIN
23
A
ARG
24
0.306
SIDE CHAIN
23
A
ARG
77
0.240
SIDE CHAIN
24
A
ARG
11
0.260
SIDE CHAIN
24
A
ARG
24
0.315
SIDE CHAIN
24
A
ARG
77
0.317
SIDE CHAIN
25
A
ARG
11
0.273
SIDE CHAIN
25
A
ARG
24
0.257
SIDE CHAIN
25
A
ARG
77
0.277
SIDE CHAIN
26
A
ARG
11
0.318
SIDE CHAIN
26
A
ARG
24
0.301
SIDE CHAIN
26
A
ARG
77
0.297
SIDE CHAIN
27
A
ARG
11
0.244
SIDE CHAIN
27
A
ARG
24
0.296
SIDE CHAIN
27
A
ARG
77
0.311
SIDE CHAIN
28
A
ARG
11
0.256
SIDE CHAIN
28
A
ARG
24
0.263
SIDE CHAIN
28
A
ARG
77
0.292
SIDE CHAIN
29
A
ARG
11
0.233
SIDE CHAIN
29
A
ARG
24
0.266
SIDE CHAIN
29
A
ARG
77
0.317
SIDE CHAIN
30
A
ARG
11
0.233
SIDE CHAIN
30
A
ARG
24
0.297
SIDE CHAIN
30
A
ARG
77
0.303
SIDE CHAIN
1
A
LYS
2
-167.57
-40.01
1
A
LYS
3
-167.69
84.81
1
A
LYS
10
-56.07
-171.57
1
A
SER
14
-165.82
63.52
1
A
ALA
15
67.63
-75.54
1
A
LEU
34
-59.74
80.17
1
A
SER
51
-88.51
-148.91
1
A
ALA
52
-89.31
47.58
1
A
ARG
77
-78.95
-75.88
2
A
LYS
2
57.20
-84.38
2
A
LYS
4
-166.26
-167.40
2
A
LYS
10
-63.02
-168.25
2
A
PRO
13
-79.94
-169.84
2
A
SER
14
-163.22
61.33
2
A
ALA
15
65.77
-78.88
2
A
LEU
34
-52.07
86.79
2
A
LYS
53
-150.77
-69.77
2
A
ARG
77
-87.26
-80.23
2
A
ALA
78
-172.26
48.36
3
A
LYS
4
-169.41
-157.72
3
A
LYS
10
-59.93
-163.65
3
A
SER
14
-166.32
63.02
3
A
ALA
15
65.75
-79.00
3
A
LEU
34
-55.79
86.99
3
A
SER
51
-86.60
-148.43
3
A
ALA
52
-87.67
49.26
3
A
ARG
77
-73.93
-74.16
3
A
ALA
78
57.85
104.82
4
A
LYS
3
-170.04
-159.67
4
A
LYS
4
-147.13
-155.26
4
A
ARG
11
-169.63
100.75
4
A
SER
14
-164.98
62.44
4
A
ALA
15
65.48
-78.10
4
A
LEU
34
-56.63
85.30
4
A
SER
51
-104.94
-152.30
4
A
LYS
53
-130.04
-51.56
4
A
ALA
78
52.18
85.49
5
A
LYS
3
-170.62
67.97
5
A
LYS
4
-59.88
-76.93
5
A
LYS
10
-56.97
-170.00
5
A
SER
14
-161.70
59.64
5
A
ALA
15
66.82
-76.88
5
A
LEU
34
-60.83
83.19
5
A
SER
51
-98.34
-152.47
5
A
ALA
52
-88.01
49.55
5
A
ARG
77
-82.78
-80.68
5
A
ALA
78
-168.53
44.11
6
A
LYS
4
-60.01
-74.75
6
A
LYS
10
-60.61
-161.03
6
A
SER
14
-159.36
59.50
6
A
ALA
15
67.60
-75.53
6
A
LEU
34
-64.44
80.91
6
A
LYS
53
-141.48
-63.03
6
A
ALA
78
-93.47
46.30
7
A
LYS
3
-174.31
-36.10
7
A
LYS
4
-49.69
-71.62
7
A
ARG
11
49.17
94.83
7
A
SER
14
-161.37
66.38
7
A
ALA
15
65.79
-77.50
7
A
LEU
34
-56.42
84.98
7
A
SER
51
-106.49
-152.12
7
A
LYS
53
-139.93
-52.60
7
A
ARG
77
-71.26
-73.82
7
A
ALA
78
57.23
103.87
8
A
LYS
3
-169.93
-65.31
8
A
LYS
4
-68.00
-74.97
8
A
LYS
10
-99.66
30.59
8
A
ARG
11
-170.53
100.57
8
A
SER
14
-156.69
54.78
8
A
ALA
15
67.99
-76.23
8
A
LEU
34
-57.86
83.88
8
A
SER
51
-96.18
-147.37
9
A
LYS
3
-170.05
64.03
9
A
LYS
10
-60.93
-157.39
9
A
SER
14
-163.17
65.30
9
A
ALA
15
67.02
-76.63
9
A
LEU
34
-60.39
82.36
9
A
SER
51
-102.01
-151.55
9
A
LYS
53
-132.54
-51.75
9
A
ARG
77
-64.56
-74.90
10
A
LYS
3
-59.94
106.66
10
A
LYS
4
-60.58
-73.67
10
A
LYS
10
-67.14
-172.37
10
A
SER
14
-157.14
67.44
10
A
ALA
15
65.61
-76.44
10
A
LEU
34
-58.52
82.54
10
A
SER
35
-69.94
-179.15
10
A
LYS
53
-139.30
-76.37
10
A
ALA
78
52.24
79.67
11
A
LYS
2
52.81
-177.20
11
A
LYS
3
52.87
75.41
11
A
LYS
4
-61.75
-77.14
11
A
ARG
11
-161.97
85.50
11
A
SER
14
-166.84
61.29
11
A
ALA
15
68.27
-77.47
11
A
LEU
34
-57.21
83.78
11
A
SER
51
-101.26
-152.61
11
A
LYS
53
-132.24
-48.92
11
A
ARG
77
-72.00
-79.86
11
A
ALA
78
-129.44
-144.80
12
A
LYS
3
-177.09
-33.64
12
A
LYS
4
-56.46
-168.72
12
A
LYS
10
-63.48
-166.91
12
A
SER
14
-168.93
62.16
12
A
ALA
15
69.60
-77.65
12
A
LEU
34
-57.20
83.81
12
A
SER
51
-103.06
-153.02
12
A
LYS
53
-133.74
-51.18
12
A
ARG
77
-75.67
-83.55
12
A
ALA
78
-172.07
38.92
13
A
LYS
3
-169.69
-154.24
13
A
LYS
4
-166.31
-151.08
13
A
LYS
10
-59.26
-165.14
13
A
SER
14
-160.23
63.33
13
A
ALA
15
67.19
-76.42
13
A
GLU
22
-142.26
-12.01
13
A
LEU
34
-64.52
82.34
13
A
SER
51
-99.87
-150.67
13
A
ALA
52
-89.65
47.46
13
A
LYS
53
-126.80
-50.71
13
A
ARG
77
-61.54
-73.00
14
A
LYS
10
-67.06
-153.92
14
A
SER
14
-170.00
61.65
14
A
ALA
15
68.13
-78.71
14
A
LEU
34
-51.79
91.76
14
A
SER
51
-104.44
-153.22
14
A
LYS
53
-136.24
-50.79
14
A
TYR
69
-75.72
-70.07
14
A
ALA
78
51.17
88.86
15
A
LYS
2
52.74
91.94
15
A
LYS
3
-170.24
100.42
15
A
LYS
10
-60.12
-162.44
15
A
SER
14
-165.48
59.21
15
A
ALA
15
68.52
-77.09
15
A
LEU
34
-61.56
83.67
15
A
SER
51
-87.23
-147.70
15
A
ALA
78
52.50
81.26
16
A
LYS
2
52.56
-169.05
16
A
LYS
3
53.62
-163.89
16
A
LYS
4
-169.07
-155.36
16
A
LYS
10
-65.60
-155.49
16
A
SER
14
-171.83
64.57
16
A
ALA
15
71.32
-74.26
16
A
LEU
34
-61.08
82.80
16
A
SER
51
-99.31
-150.15
16
A
LYS
53
-134.99
-43.25
16
A
ALA
78
55.19
73.83
17
A
LYS
3
53.99
-168.63
17
A
LYS
10
-62.53
-155.00
17
A
PRO
13
-79.29
-169.41
17
A
SER
14
-163.00
63.67
17
A
ALA
15
66.49
-78.06
17
A
LEU
34
-55.11
86.28
17
A
LYS
53
-149.26
-64.76
18
A
LYS
4
-60.50
-71.53
18
A
SER
14
-157.06
53.90
18
A
ALA
15
68.12
-76.57
18
A
LEU
34
-56.62
87.78
18
A
SER
51
-89.43
-151.63
18
A
LYS
53
-136.87
-41.59
18
A
ARG
77
-71.42
-81.05
18
A
ALA
78
-168.92
38.17
19
A
LYS
3
-65.02
-162.00
19
A
LYS
4
-144.72
-146.86
19
A
LYS
10
35.87
-156.49
19
A
SER
14
-165.40
63.33
19
A
ALA
15
66.64
-77.25
19
A
LEU
34
-59.16
82.64
19
A
LYS
53
-141.60
-65.57
19
A
ALA
78
52.83
74.85
20
A
LYS
3
52.79
94.55
20
A
LYS
4
-60.02
-70.62
20
A
LYS
10
-61.31
-165.98
20
A
SER
14
-168.74
56.77
20
A
ALA
15
70.32
-76.92
20
A
LEU
34
-46.01
90.65
20
A
SER
51
-77.87
-137.80
20
A
ALA
52
-90.50
36.10
20
A
ASP
54
-92.92
53.66
20
A
LYS
55
-173.01
-65.18
20
A
ALA
78
51.80
95.61
21
A
LYS
3
-170.19
132.68
21
A
LYS
4
-60.08
-72.28
21
A
LYS
10
-60.16
-166.20
21
A
SER
14
-167.98
59.41
21
A
ALA
15
69.43
-75.76
21
A
LEU
34
-54.78
86.01
21
A
SER
51
-94.13
-154.08
21
A
ARG
77
-78.65
-83.40
21
A
ALA
78
-136.98
-143.10
22
A
LYS
3
-170.85
-158.07
22
A
LYS
10
-144.18
31.37
22
A
SER
14
-167.48
56.54
22
A
ALA
15
68.94
-79.81
22
A
LEU
34
-48.20
90.87
22
A
GLN
50
-59.03
-167.35
22
A
SER
51
-156.75
-147.07
22
A
ASP
54
-87.91
49.87
22
A
LYS
55
-159.82
-59.81
22
A
ARG
77
-130.50
-32.76
22
A
ALA
78
53.06
75.39
23
A
LYS
3
53.78
-172.09
23
A
LYS
4
-166.19
-75.83
23
A
LYS
10
-63.53
-164.78
23
A
SER
14
-166.31
65.20
23
A
ALA
15
66.91
-76.59
23
A
LEU
34
-50.18
91.11
23
A
SER
51
-92.75
-149.58
23
A
GLN
56
-100.36
-61.09
23
A
ALA
78
53.24
72.83
24
A
LYS
3
-170.02
-48.80
24
A
LYS
4
-168.53
-165.69
24
A
LYS
10
-59.56
-163.08
24
A
SER
14
-162.75
65.76
24
A
ALA
15
66.83
-76.58
24
A
LEU
34
-61.71
79.56
24
A
SER
51
-164.17
110.86
24
A
LYS
53
-135.39
-73.51
25
A
ASP
5
59.30
163.13
25
A
LYS
10
-69.35
-166.43
25
A
SER
14
-169.59
69.07
25
A
ALA
15
67.11
-77.64
25
A
LEU
34
-53.79
88.14
25
A
SER
51
-93.52
-149.76
25
A
ALA
52
-92.26
41.81
25
A
TYR
76
-93.81
30.70
25
A
ARG
77
-137.76
-104.76
25
A
ALA
78
-145.17
51.78
26
A
LYS
2
-97.59
41.73
26
A
LYS
10
-59.47
-160.38
26
A
SER
14
-167.77
60.13
26
A
ALA
15
70.14
-74.79
26
A
PRO
32
-77.43
-71.74
26
A
LEU
34
-53.41
92.85
26
A
SER
35
-57.70
175.53
26
A
SER
51
-98.22
-152.08
26
A
LYS
53
-134.98
-46.03
27
A
LYS
3
-169.94
34.43
27
A
LYS
4
53.89
-161.42
27
A
LYS
10
-67.97
-160.17
27
A
SER
14
-170.01
62.51
27
A
ALA
15
70.88
-75.98
27
A
PRO
32
-78.34
-75.41
27
A
LEU
34
-46.59
96.04
27
A
SER
51
-101.41
-153.01
27
A
LYS
53
-132.25
-49.29
27
A
LYS
71
-92.62
-62.53
27
A
ARG
77
-84.23
-80.84
27
A
ALA
78
-168.71
44.80
28
A
LYS
4
-66.66
-137.11
28
A
PRO
9
-84.73
43.37
28
A
ARG
11
49.79
99.82
28
A
SER
14
-158.73
51.43
28
A
ALA
15
71.58
-73.83
28
A
LEU
34
-62.46
81.64
28
A
SER
51
-92.83
-152.15
28
A
LYS
53
-135.95
-43.61
28
A
ALA
78
51.12
88.50
29
A
LYS
4
-61.25
-83.45
29
A
LYS
10
-70.82
-154.84
29
A
SER
14
-170.53
62.90
29
A
ALA
15
69.70
-76.31
29
A
LEU
34
-48.01
92.22
29
A
SER
35
-66.89
-179.30
29
A
SER
51
-89.91
-151.53
29
A
LYS
53
-132.17
-43.16
30
A
LYS
3
-170.08
71.28
30
A
ARG
11
-163.27
95.62
30
A
SER
14
-151.82
55.78
30
A
ALA
15
67.87
-74.94
30
A
LEU
34
-62.18
81.72
30
A
SER
51
-100.52
-151.93
30
A
LYS
53
-130.46
-49.92
30
A
TYR
76
-73.85
-150.20
30
A
ARG
77
66.91
-61.87
Solution structure of the C-terminal domain of the HMGB2
1
N
N
A
ALA
15
A
ALA
15
HELX_P
A
HIS
31
A
HIS
31
1
1
17
A
SER
35
A
SER
35
HELX_P
A
GLN
50
A
GLN
50
1
2
16
A
GLN
60
A
GLN
60
HELX_P
A
LYS
64
A
LYS
64
5
3
5
A
LEU
65
A
LEU
65
HELX_P
A
ALA
78
A
ALA
78
1
4
14
DNA BINDING PROTEIN
HMG-BOX, DNA binding protein
HMG2_PIG
UNP
1
87
P17741
KKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK
87
164
1J3C
2
79
P17741
A
1
2
79
1
initiating methionine
MET
1
1J3C
A
P17741
UNP
1
1
HIS
engineered mutation
TYR
23
1J3C
A
P17741
UNP
108
23